1,136 results on '"Vonk, J."'
Search Results
202. Massive remobilization of permafrost carbon during post-glacial warming
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Tesi, T., Muschitiello, F., Smittenberg, R. H., Jakobsson, M., Vonk, J. E., Hill, P., Andersson, A., Kirchner, N., Noormets, R., Dudarev, O., Semiletov, I., Gustafsson, Ö, Faculty of Earth and Life Sciences, Vrije Universiteit Amsterdam, and Earth and Climate
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Science ,SDG 13 - Climate Action ,LAPTEV SEA SHELF ,PARTICULATE ORGANIC-MATTER ,LAST GLACIAL TERMINATION ,ADJACENT NEARSHORE ZONE ,GREENLAND STADIAL 1 ,LENA RIVER DELTA ,INTERIOR ALASKA ,YOUNGER DRYAS ,ARCTIC-OCEAN ,NE SIBERIA ,SDG 14 - Life Below Water ,Article - Abstract
Recent hypotheses, based on atmospheric records and models, suggest that permafrost carbon (PF-C) accumulated during the last glaciation may have been an important source for the atmospheric CO2 rise during post-glacial warming. However, direct physical indications for such PF-C release have so far been absent. Here we use the Laptev Sea (Arctic Ocean) as an archive to investigate PF-C destabilization during the last glacial–interglacial period. Our results show evidence for massive supply of PF-C from Siberian soils as a result of severe active layer deepening in response to the warming. Thawing of PF-C must also have brought about an enhanced organic matter respiration and, thus, these findings suggest that PF-C may indeed have been an important source of CO2 across the extensive permafrost domain. The results challenge current paradigms on the post-glacial CO2 rise and, at the same time, serve as a harbinger for possible consequences of the present-day warming of PF-C soils., Atmospheric CO2 increases during the last deglaciation have been linked to the destabilisation of permafrost carbon reservoirs. Here, using a sediment core from the Laptev Sea, Tesi et al. indicate a massive supply of permafrost carbon was released from Siberia following active layer deepening.
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- 2016
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203. Economische effecten van thuisadministratie: Onderzoek in opdracht van het Landelijk Stimuleringsnetwerk Thuisadministratie (LSTA)
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Veen, S. van der, Vonk, J., and Middendorp, J.G. van
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Inequality, cohesion and modernization ,Ongelijkheid, cohesie en modernisering - Abstract
Item does not contain fulltext 53 p.
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- 2016
204. Size-Mediated Effects of Water-Flow Velocity on Riverine Fish Species
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Del Signore, A., Lenders, H. J. R., Hendriks, A. J., Vonk, J. A., Mulder, C., Leuven, R. S. E. W., and Aquatic Environmental Ecology (IBED, FNWI)
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Physical stress ,Allometry ,Rivers ,Ecological risk assessment ,Fish occurrence ,Environmental Chemistry ,Water Science and Technology ,2300 ,Environmental Sciences - Abstract
We applied species sensitivity distributions (SSDs), commonly used in chemical risk assessment, to quantify the impact of water‐flow velocity on the presence of fish species in a river. SSDs for water‐flow velocity were derived from observational field data (maximal velocity at which species occur, Vmax) and laboratory measurements (critical swimming velocity, Vcrit). By calculating the potentially affected fraction of the fish species of the river Rhine, effects of water‐flow velocity on different life stages and guilds were estimated. Vmax values for adults were significantly higher than those for juveniles and larvae. At water‐flow velocity of 60 cm s−1, half of the adults were affected, while half of the non‐adult life stages were affected at velocities of 25 to 29 cm s−1. There was a positive correlation between body size and fish tolerance to water‐flow. As expected, rheophilic species tolerated higher water‐flow velocities than eurytopic and limnophilic species. Maximal velocities measured in littoral zones of the Rhine were, on average, 10 cm s−1, corresponding to an affected fraction of 2%. An increase in water‐flow velocity up to 120 cm s−1 as a result of passing vessels caused an increase in affected species to 75%. For a successful ecological river management, the SSD method can be used to quantify the trait‐mediated effects of water‐flow alterations on occurring species enabling to compare and rank the effects of chemical and physical stress.
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- 2016
205. Citizen science with small sensor networks. Collaboration between a Dutch EPA (RIVM) and local initiatives
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Volten, H., Devilee, J., Apituley, A., Carton, L.J., Grothe, M., Keller, C., Kresin, F., Land-Zandstra, A., Noordijk, E., Putten, E. van, Rietjes, J., Snik, F., Tielemans, E., Vonk, J., Voogt, M., Wesseling, J., Bonn, A., Hecker, S., Haklay, M., Robinson, L., Vogel, J., Vohland, K., Bonn, A., Hecker, S., Haklay, M., Robinson, L., Vogel, J., and Vohland, K.
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Institute for Management Research - Abstract
Contains fulltext : 164809pre.pdf (Author’s version preprint ) (Open Access) In this chapter, we describe a number of the citizen science projects RIVM took part in. The Smart Emission project in Nijmegen is one of the pilot projects. In this book chapter, we give examples of the lessons learned and the experiences gained. We provide a brief description of the planned innovations of the environmental monitoring, and how these innovations will help to ensure the continuity and effectiveness of citizen science measurements. The initial focus will be on air quality, but we expect that application is possible with other environmental parameters such as noise and water quality, light, vibration, radiation and meteorological parameters. These applications will follow in a later phase of the program. The final goal is to have a hybrid, flexible (air quality) network using different types of sensors, consisting of reference instruments, sensors of intermediate cost and quality, low cost sensors, and satellite observations. The data of this network may be provided by different parties, including citizens groups, cities, NGOs and official measurement institutes. In short, our ambition is to make citizen science data an integral part of standard procedures and models for determining air quality. Book after the First European Citizen Science Conference, Berlin, 19-21 May 2016
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- 2016
206. Permafrost onderzoek in het noorden van Siberië
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van Huissteden, J., Vonk, J., Heijmans, M.M.P.D., and Blok, D.
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WIMEK ,Plantenecologie en Natuurbeheer ,Life Science ,Plant Ecology and Nature Conservation - Published
- 2016
207. COPD Subtype Identification In The International COPD Genetics Consortium: Collaborative Subtyping Results Across Ten Cohorts
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Castaldi, P. J., Benet-Mora, M., Petersen, H., Boorgula, M. Preethi, Finigan, J., Paoletti, M., Boezen, M., Vonk, J. M., Bowler, R. P., Agusti, A., Pistolesi, M., Puhan, M. A., Ter Riet, G., Wauters, E., Anto, J., Cho, M. H., Hersh, C. P., Barnes, K., Rennard, S. I., Rafaels, N., Crapo, J. D., Tesfaigzi, Y., Silverman, E. K., Garcia-Aymerich, J., Groningen Research Institute for Asthma and COPD (GRIAC), and Life Course Epidemiology (LCE)
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- 2016
208. Biomass offsets little or none of permafrost carbon release from soils, streams, and wild␣re: an expert assessment
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Abbott, B. W., Jones, J. B., Schuur, E. A. G., Chapin, F. S., Bowden, W. B., Bret-Harte, M. S., Epstein, H. E., Flannigan, M. D., Harms, T. K., Hollingsworth, T. N., Mack, M. C., Mcguire, A. D., Natali, S. M., Rocha, A. V., Tank, S. E., Turetsky, M. R., Vonk, J. E., Wickland, K. P., Aiken, G. R., Alexander, H. D., Amon, R. M. W., Benscoter, B. W., Bergeron, Y., Bishop, K., Blarquez, O., Bond-Lamberty, B., Breen, A. L., Buffam, I., Cai, Y. H., Christopher Carcaillet, Carey, S. K., Chen, J. M., Chen, H. Y. H., Christensen, T. R., Cooper, L. W., Cornelissen, J. H. C., Groot, W. J., Deluca, T. H., Dorrepaal, E., Fetcher, N., Finlay, J. C., Forbes, B. C., French, N. H. F., Gauthier, S., Girardin, M. P., Goetz, S. J., Goldammer, J. G., Gough, L., Grogan, P., Guo, L. D., Higuera, P. E., Hinzman, L., Hu, F. S., Hugelius, G., Jafarov, E. E., Jandt, R., Johnstone, J. F., Karlsson, J., Kasischke, E. S., Kattner, G., Kelly, R., Keuper, F., Kling, G. W., Kortelainen, P., Kouki, J., Kuhry, P., Laudon, H., Laurion, I., Macdonald, R. W., Mann, P. J., Martikainen, P. J., Mcclelland, J. W., Molau, U., Oberbauer, S. F., Olefeldt, D., Pare, D., Parisien, M. A., Payette, S., Peng, C. H., Pokrovsky, O. S., Rastetter, E. B., Raymond, P. A., Raynolds, M. K., Rein, G., Reynolds, J. F., Robards, M., Rogers, B. M., Schadel, C., Schaefer, K., Schmidt, I. K., Shvidenko, A., Sky, J., Spencer, R. G. M., Starr, G., Striegl, R. G., Teisserenc, R., Tranvik, L. J., Virtanen, T., Welker, J. M., Zimov, S., Institute of Arctic Biology and Department of Biology & Wildlife, University of Alaska [Fairbanks] (UAF), Ecosystèmes, biodiversité, évolution [Rennes] (ECOBIO), Université de Rennes 1 (UR1), Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-Institut Ecologie et Environnement (INEE), Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Observatoire des Sciences de l'Univers de Rennes (OSUR)-Centre National de la Recherche Scientifique (CNRS), Laboratoire d'Ecologie des Hydrosystèmes Naturels et Anthropisés (LEHNA), Centre National de la Recherche Scientifique (CNRS)-Institut National de la Recherche Agronomique (INRA)-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-École Nationale des Travaux Publics de l'État (ENTPE), McMaster University [Hamilton, Ontario], 955713, National Science Foundation, OPP-0806394, Office of Polar Programs, Future Forest (Mistra), SITES (Swedish Science Foundation), TOMCAR-Permafrost #277059, Marie Curie International Reintegration, Institute of Arctic Biology, Université de Rennes (UR)-Institut Ecologie et Environnement (INEE), Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Observatoire des Sciences de l'Univers de Rennes (OSUR), Université de Rennes (UR)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Centre National de la Recherche Scientifique (CNRS), Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-École Nationale des Travaux Publics de l'État (ENTPE)-Centre National de la Recherche Scientifique (CNRS), Centre National de la Recherche Scientifique (CNRS)-Observatoire des Sciences de l'Univers de Rennes (OSUR)-Institut Ecologie et Environnement (INEE), Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Université de Rennes 1 (UR1), Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES), Earth and Climate, Systems Ecology, Amsterdam Global Change Institute, Environmental Sciences, Tarmo Virtanen / Principal Investigator, and Environmental Change Research Unit (ECRU)
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0106 biological sciences ,010504 meteorology & atmospheric sciences ,Biomass ,F800 ,SEQUESTRATION ,Permafrost ,01 natural sciences ,FIRE ,wildfire ,Klimatforskning ,Arctic ,вечная мерзлота ,Dissolved organic carbon ,ECOSYSTEMS ,SDG 13 - Climate Action ,boreal ,General Environmental Science ,Total organic carbon ,ARCTIC TUNDRA ,CLIMATE-CHANGE ,Carbon ,Climate change ,Miljövetenskap ,Permafrost carbon cycle ,Earth and Related Environmental Sciences ,STORAGE ,углеродный баланс ,particulate organic carbon ,Climate Research ,permafrost carbon ,Soil science ,010603 evolutionary biology ,BOREAL FOREST ,биомасса ,Ecosystem ,SDG 14 - Life Below Water ,1172 Environmental sciences ,0105 earth and related environmental sciences ,INTERIOR ALASKA ,coastal erosion ,Hydrology ,VULNERABILITY ,NITROGEN DEPOSITION ,Renewable Energy, Sustainability and the Environment ,coastal erosion Supplementary material for this article is available ,Public Health, Environmental and Occupational Health ,Geovetenskap och miljövetenskap ,15. Life on land ,dissolved organic carbon ,Tundra ,13. Climate action ,Soil water ,Environmental science ,[SDE.BE]Environmental Sciences/Biodiversity and Ecology ,Environmental Sciences - Abstract
CT3 ; EnjS4; International audience; As the permafrost region warms, its large organic carbon pool will be increasingly vulnerable to decomposition, combustion, and hydrologic export. Models predict that some portion of this release will be offset by increased production of Arctic and boreal biomass; however, the lack of robust estimates of net carbon balance increases the risk of further overshooting international emissions targets. Precise empirical or model-based assessments of the critical factors driving carbon balance are unlikely in the near future, so to address this gap, we present estimates from 98 permafrost-region experts of the response of biomass, wild␣re, and hydrologic carbon ␣ux to climate change. Results suggest that contrary to model projections, total permafrost-region biomass could decrease due to water stress and disturbance, factors that are not adequately incorporated in current models. Assessments indicate that end-of-the-century organic carbon release from Arctic rivers and collapsing coastlines could increase by 75% while carbon loss via burning could increase four-fold. Experts identi␣ed water balance, shifts in vegetation community, and permafrost degradation as the key sources of uncertainty in predicting future system response. In combination with previous ␣ndings, results suggest the permafrost region will become a carbon source to the atmosphere by 2100 regardless of warming scenario but that 65%–85% of permafrost carbon release can still be avoided if human emissions are actively reduced.
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- 2016
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209. Identification Of Novel Genes Related To Two Definitions Of Airway Obstruction In Never-Smokers
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Van Der Plaat, D. A., De Jong, K., Faiz, A., Vonk, J. M., Van Diemen, C. C., Nedeljkovic, I., Amin, N., Brandsma, C., Bosse, Y., Sin, D. D., Nickle, D. C., Van Duijn, C. M., Postma, D. S., Boezen, H., Groningen Research Institute for Asthma and COPD (GRIAC), and Life Course Epidemiology (LCE)
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- 2016
210. Vaktherapie
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De Witte, M., Bellemans, T., Tukker, K., Van Hooren, S., de Bruijn, J., Vonk, J., van den Broek, A., Twint, B., RS-Research Line Clinical psychology (part of IIESB program), and Department Clinical Psychology
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- 2016
211. Trait-mediated diversification in nematode predator–prey systems
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Mulder, Christian, Helder, Johannes, Vervoort, Mariëtte T W, and Arie Vonk, J
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body size ratios ,soil food webs ,nematode behavioural ecology ,Adults and juveniles ,predator–prey relationships ,Original Research - Abstract
Nematodes are presumably the most numerous Metazoans in terrestrial habitats. They are represented at all trophic levels and are known to respond to nutrient limitation, prey availability, and microbial resources. Predatory nematodes reside at the highest trophic level, and as such their feeding habits could have a major impact on soil food web functioning. Here, we investigate the effects of gender and developmental stage on the nematode body sizes in coarse and loamy soils. Besides Neodiplogasteridae, our predators are much larger than other soil-dwelling nematodes from their early developmental stage onwards. From juvenile to adult, the predatory Aporcelaimellus (Kruskal–Wallis P < 0.001), Dorylaimoides, and Tripyla (both P < 0.01) show great length increases during their developmental growth, in contrast to their possible prey (almost all P < 0.001). Less than 4% of the prey exceeds the length of the predatory adults, but more than 30% of the prey exceeds the length of the predatory juveniles. Potential body size ratios and some physical problems experienced by small fluid feeders attacking large prey are discussed in an attempt to summarize different prey-searching mechanisms and aggregative predatory responses in the soil system.
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- 2011
212. Effect of fluticasone with and without salmeterol on pulmonary outcomes in chronic obstructive pulmonary disease
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Lapperre, T. S., Snoeck-Stroband, J. B., Gosman, M. M. E., Jansen, D. F., Schadewijk, A., Thiadens, H. A., Vonk, J. M., Boezen, H. M., Ten Hacken, N. H. T., Sont, J. K., Rabe, K. F., Kerstjens, H. A. M., Hiemstra, P. S., Wim Timens, Postma, D. S., Sterk, P. J., Kauffman, H. F., Reus, D., Barentsen, M. D. W., Zeinstra-Smit, M., Luteijn, A. J., Molen, T., Ter Veen, G., Maaren, M. S., Veltman, C. A., Verbokkem, A., Verhage, I., Vink-Klooster, H. K., Gast-Strookman, J., Janssen, K., Schrumpf, J. A., Smit-Bakker, J., Stolk, J., Tiré, A. C. J. A., Veen, H., Wijffels, M. M. E., Willems, L. N. A., Mauad, T., GLUCOLD Study Grp, Internal Medicine, Epidemiology, Surgery, Erasmus MC other, Pharmacy, Department of Strategic Management and Entrepreneurship, AII - Amsterdam institute for Infection and Immunity, and Pulmonology
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Male ,medicine.medical_specialty ,medicine.drug_class ,Bronchi ,Cell Count ,Placebo ,Gastroenterology ,Fluticasone propionate ,Drug Administration Schedule ,Pulmonary function testing ,Pulmonary Disease, Chronic Obstructive ,Bronchodilator ,Internal medicine ,Forced Expiratory Volume ,Administration, Inhalation ,Internal Medicine ,Medicine ,Humans ,Albuterol ,Lung ,Salmeterol Xinafoate ,Fluticasone ,Asthma ,Aged ,Inflammation ,COPD ,business.industry ,Smoking ,Sputum ,General Medicine ,Middle Aged ,medicine.disease ,Surgery ,Bronchodilator Agents ,Androstadienes ,Treatment Outcome ,Drug Therapy, Combination ,Female ,Salmeterol ,Human medicine ,business ,medicine.drug - Abstract
Background: Inhaled corticosteroids (ICSs) and long-acting β2-agonists (LABAs) are used to treat moderate to severe chronic obstructive pulmonary disease (COPD). Objective: To determine whether long-term ICS therapy, with and without LABAs, reduces inflammation and improves pulmonary function in COPD. Design: Randomized, placebo-controlled trial. (ClinicalTrials.gov registration number: NCT00158847) Setting: 2 university medical centers in The Netherlands. Patients: 114 steroid-naive current or former smokers with moderate to severe COPD. Measurements: Cell counts in bronchial biopsies and sputum (primary outcome); methacholine responsiveness at baseline, 6, and 30 months; and clinical outcomes every 3 months. Intervention: Random assignment by minimization method to receive fluticasone propionate, 500 μg twice daily, for 6 months (n = 31) or 30 months (n = 26); fluticasone, 500 μg twice daily, and salmeterol, 50 μg twice daily, for 30 months (single inhaler; n = 28); or placebo twice daily (n = 29). Results: 101 patients were greater than 70% adherent to therapy. Fluticasone therapy decreased counts of mucosal CD3+ cells (-55% [95% CI, -74% to -22%]; P - 0.004), CD4- cells (-78% [CI, -88% to 60%]; P < 0.001), CD8+ cells (-57% [CI, -77% to -18%]; P = 0.010), and mast cells (-38% [CI, -60% to -2%]; P = 0.039) and reduced hyperresponsiveness (P = 0.036) versus placebo at 6 months, with effects maintained after 30 months. Fluticasone therapy for 30 months reduced mast cell count and increased eosinophil count and percentage of intact epithelium, with accompanying reductions in sputum neutrophil, macrophage, and lymphocyte counts and improvements in FEV1 decline, dyspnea, and quality of life. Reductions in inflammatory cells correlated with clinical improvements. Discontinuing fluticasone therapy at 6 months increased counts of CD3+ cells (120% [CI, 24% to 289%]; P = 0.007), mast cells (218% [CI, 99% to 407%]; P < 0.001), and plasma cells (118% [CI, 9% to 336%]; P = 0.028) and worsened clinical outcome. Adding salmeterol improved FEV1 level. Limitations: The study was not designed to evaluate clinical outcomes. Measurement of primary outcome was not available for 24% of patients at 30 months. Conclusion: ICS therapy decreases inflammation and can attenuate decline in lung function in steroid-naive patients with moderate to severe COPD. Adding LABAs does not enhance these effects. Primary Funding Source: Netherlands Organization for Scientific Research, Netherlands Asthma Foundation, GlaxoSmithKline of The Netherlands, University Medical Center Groningen, and Leiden University Medical Center.
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- 2009
213. Oxygen drives benthic-pelagic decomposition pathways in shallow wetlands
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van der Lee, Gea H., primary, Kraak, Michiel H. S., additional, Verdonschot, Ralf C. M., additional, Vonk, J. Arie, additional, and Verdonschot, Piet F. M., additional
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- 2017
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214. Impact of water drawdown and rewetting on sediment nutrient-dynamics in a constructed delta-lake system (Oostvaardersplassen, The Netherlands): A mesocosm study
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Vonk, J. Arie, primary, Rombouts, Titus, additional, Schoorl, Jorien C., additional, Serne, Peter, additional, Westerveld, Joke W., additional, Cornelissen, Perry, additional, and van der Geest, Harm G., additional
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- 2017
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215. Expansion and fragment settlement of the non-native seagrass Halophila stipulacea in a Caribbean bay
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Smulders, Fee O. H., primary, Vonk, J. Arie, additional, Engel, M. Sabine, additional, and Christianen, Marjolijn J. A., additional
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- 2017
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216. Adult onset asthma and interaction between genes and active tobacco smoking: The GABRIEL consortium
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Vonk, J. M., primary, Scholtens, S., additional, Postma, D. S., additional, Moffatt, M. F., additional, Jarvis, D., additional, Ramasamy, A., additional, Wjst, M., additional, Omenaas, E. R., additional, Bouzigon, E., additional, Demenais, F., additional, Nadif, R., additional, Siroux, V., additional, Polonikov, A. V., additional, Solodilova, M., additional, Ivanov, V. P., additional, Curjuric, I., additional, Imboden, M., additional, Kumar, A., additional, Probst-Hensch, N., additional, Ogorodova, L. M., additional, Puzyrev, V. P., additional, Bragina, E. Yu, additional, Freidin, M. B., additional, Nolte, I. M., additional, Farrall, A. M., additional, Cookson, W. O. C. M., additional, Strachan, D. P., additional, Koppelman, G. H., additional, and Boezen, H. M., additional
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- 2017
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217. Microbial catabolic diversity in and beyond the rhizosphere of plant species and plant genotypes
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Brolsma, Karst M., primary, Vonk, J. Arie, additional, Mommer, Liesje, additional, Van Ruijven, Jasper, additional, Hoffland, Ellis, additional, and De Goede, Ron G.M., additional
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- 2017
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218. Sociaal-emotioneel functioneren
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Van der Burg, J., Schuengel, C., Vonk, J., Hadders-Algra, M., Maathuis, K., Pangalila, R.F., Becher, J., de Moor, J., Clinical Child and Family Studies, and LEARN! - Social cognition and learning
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- 2015
219. CDI Knowledge & Business Brokering Facility for the Zambezi Valley Development Agency : Annual Report 2014 (incl. inception phase 2013)
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Brouwer, J.H. and Vonk, J.
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Advisory ,Life Science - Published
- 2015
220. Sociaal-emotioneel functioneren
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Burg, J., Carlo Schuengel, Vonk, J., Hadders-Algra, M., Pangalila, R.F., Becher, J.G., Burg, J., Hielkema, T., Moor, J. de, Maathuis, K., Becher, J., and de Moor, J.
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Learning and Plasticity - Abstract
Item does not contain fulltext
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- 2015
221. Emissies naar lucht uit de landbouw, 1990-2013 : berekeningen van ammoniak, stikstofoxide, lachgas,methaan en fijn stof met het model NEMA
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van Bruggen, C., Bannink, A., Groenestein, C.M., Huijsmans, J.F.M., Luesink, H.H., Sluis, S.M., Velthof, G.L., and Vonk, J.
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methaanproductie ,Animal Nutrition ,Performance and Impact Agrosectors ,begrazing ,animal manures ,air pollution ,Emissie & Mestverwaarding ,intensieve veehouderij ,methane production ,nitrogen ,Performance en Impact Agrosectoren ,ammoniakemissie ,grazing ,Duurzaam Bodemgebruik ,dierlijke meststoffen ,Agro Field Technology Innovations ,fijn stof ,Sustainable Soil Use ,particulate matter ,WIMEK ,ammonia emission ,Diervoeding ,stikstof ,WOT Natuur & Milieu ,WIAS ,Emissions & Manure Valorisation ,intensive livestock farming ,luchtverontreiniging - Abstract
Landbouwkundige activiteiten zijn een belangrijke bron van ammoniak (NH3), stikstofoxiden (NO), lachgas (N2O), methaan (CH4) en fijn stof (PM10 en PM2,5) in Nederland. De emissies voor de periode 1990-2013 zijn berekend met het National Emission Model for Agriculture (NEMA) met toepassing van nieuwe wetenschappelijke inzichten rond emissiefactoren voor ammoniak uitstallen en op basis van de nieuwe 2006 IPCC Guidelines. De rekenmethodiek gaat bij de berekening van de ammoniakemissie uit van de hoeveelheid totaal ammoniakaal stikstof (TAN) in de mest. De ammoniakemissie uit dierlijke mest, kunstmest en overige bronnen bedroeg in 2013 120 miljoen kg NH3, 1,5 miljoen kg minder dan in 2012, voornamelijk door meer emissiearmehuisvesting bij varkens en pluimvee. De N2O-emissie bedroeg zowel in 2012 als in 2013 ruim 19 miljoen kg. De NO-emissie nam licht toe van 16,7 naar 16,9 miljoen kg. De methaanemissie nam toe van 487 tot 499 miljoen kg. De emissie van fijn stof nam licht toe van 6,4 miljoen kg PM10 in 2012 tot 6,5 miljoen kg in 2013 door een toename van het aantal leghennen. De emissie van PM2,5 bedroeg in beide jaren 0,6 miljoen kg. Sinds 1990 is de ammoniakemissie uit dierlijke mest en kunstmest met bijna 70% gedaald, vooral door een lagere stikstof-uitscheiding door landbouwhuisdieren en emissiearme mesttoedieningstechnieken.Lachgas en stikstofoxiden daalden in dezelfde periode eveneens, maar minder scherp (ca. 40%) vanwege hogere emissies door het ondergronds aanwenden van mest (N2O) en door de omschakeling van stalsystemen met dunne naar vastemest bij pluimvee (N2O en NO). Tussen 1990 en 2013 daalde de emissie van methaan met 17%, wat vrijwel geheel verklaard kan worden door een afname in de dieraantallen.
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- 2015
222. Reviews and syntheses : Effects of permafrost thaw on Arctic aquatic ecosystems
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Vonk, J. E., Tank, S. E., Bowden, W. B., Laurion, I., Vincent, W. F., Alekseychik, P., Amyot, M., Billet, M. F., Canário, J., Cory, R. M., Deshpande, B. N., Helbig, M., Jammet, M., Karlsson, J., Larouche, J., Macmillan, G., Rautio, M., Walter Anthony, K. M., Wickland, K. P., Organic geochemistry, NWO-VENI: Ancient organic matter that matters: The fate of Siberian Yedoma deposits, Organic geochemistry, and NWO-VENI: Ancient organic matter that matters: The fate of Siberian Yedoma deposits
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0106 biological sciences ,010504 meteorology & atmospheric sciences ,Evolution ,Earth science ,lcsh:Life ,010501 environmental sciences ,Permafrost ,Freshwater ecosystem ,01 natural sciences ,Thermokarst ,Behavior and Systematics ,lcsh:QH540-549.5 ,SDG 13 - Climate Action ,Organic matter ,14. Life underwater ,Thaw depth ,Ecology, Evolution, Behavior and Systematics ,Earth-Surface Processes ,0105 earth and related environmental sciences ,chemistry.chemical_classification ,Ekologi ,geography ,geography.geographical_feature_category ,Ecology ,Aquatic ecosystem ,010604 marine biology & hydrobiology ,lcsh:QE1-996.5 ,Lake ecosystem ,15. Life on land ,lcsh:Geology ,lcsh:QH501-531 ,chemistry ,Arctic ,13. Climate action ,Environmental science ,lcsh:Ecology - Abstract
The Arctic is a water-rich region, with freshwater systems covering 16 % of the northern permafrost landscape. The thawing of this permafrost creates new freshwater ecosystems, while at the same time modifying the existing lakes, streams, and rivers that are impacted by thaw. Here, we describe the current state of knowledge regarding how permafrost thaw affects lentic and lotic systems, exploring the effects of both thermokarst (thawing and collapse of ice-rich permafrost) and deepening of the active layer (the surface soil layer that thaws and refreezes each year). Within thermokarst, we further differentiate between the effects of thermokarst in lowland areas, vs. that on hillslopes. For almost all of the processes that we explore, the effects of thaw vary regionally, and between lake and stream systems. Much of this regional variation is caused by differences in ground ice content, topography, soil type, and permafrost coverage. Together, these modifying variables determine the degree to which permafrost thaw manifests as thermokarst, whether thermokarst leads to slumping or the formation of thermokarst lakes, and the manner in which constituent delivery to freshwater systems is altered by thaw. Differences in thaw-enabled constituent delivery can be considerable, with these modifying variables determining, for example, the balance between delivery of particulate vs. dissolved constituents, and inorganic vs. organic materials. Changes in the composition of thaw-impacted waters, coupled with changes in lake morphology, can strongly affect the physical and optical properties of thermokarst lakes. The ecology of thaw-impacted systems is also likely to change, with thaw-impacted lakes and streams having unique microbiological communities, and showing differences in respiration, primary production, and food web structure that are largely driven by differences in sediment, dissolved organic matter and nutrient delivery. The degree to which thaw enables the delivery of dissolved vs. particulate organic matter, coupled with the composition of that organic matter and the morphology and stratification characteristics of recipient systems will play an important role in determining the balance between the release of organic matter as greenhouse gases (CO2 and CH4), its burial in sediments, and its loss downstream. The magnitude of thaw impacts on northern aquatic ecosystems is increasing, as is the prevalence of thaw-impacted lakes and streams. There is therefore an urgent need to address the key gaps in understanding in order to predict the full effects of permafrost thaw on aquatic ecosystems throughout the Arctic, and their consequential feedbacks to climate.
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- 2015
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223. Biodegradability of dissolved organic carbon in permafrost soils and aquatic systems: a meta-analysis
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Vonk, J. E., Tank, S. E., Mann, P. J., Spencer, R. G M, Treat, C. C., Striegl, R. G., Abbott, B. W., Wickland, K. P., Organic geochemistry, NWO-VENI: Ancient organic matter that matters: The fate of Siberian Yedoma deposits, Department of Earth Sciences [Utrecht], Utrecht University [Utrecht], Arctic Center, University of Groningen [Groningen], Department of Biological Sciences, University of Alberta, Department of Geography, University of Northumbria at Newcastle [United Kingdom], Ecosystèmes, biodiversité, évolution [Rennes] (ECOBIO), Centre National de la Recherche Scientifique (CNRS)-Observatoire des Sciences de l'Univers de Rennes (OSUR)-Institut Ecologie et Environnement (INEE), Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Université de Rennes 1 (UR1), Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES), Organic geochemistry, NWO-VENI: Ancient organic matter that matters: The fate of Siberian Yedoma deposits, Groningen Institute of Archaeology, Earth and Climate, Université de Rennes (UR)-Institut Ecologie et Environnement (INEE), Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Observatoire des Sciences de l'Univers de Rennes (OSUR), and Université de Rennes (UR)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Centre National de la Recherche Scientifique (CNRS)
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010504 meteorology & atmospheric sciences ,Evolution ,[SDV]Life Sciences [q-bio] ,Yedoma ,lcsh:Life ,F800 ,010501 environmental sciences ,Permafrost ,01 natural sciences ,Behavior and Systematics ,lcsh:QH540-549.5 ,Dissolved organic carbon ,SDG 13 - Climate Action ,Ecology, Evolution, Behavior and Systematics ,0105 earth and related environmental sciences ,Earth-Surface Processes ,2. Zero hunger ,Hydrology ,Total organic carbon ,Ecology ,Aquatic ecosystem ,lcsh:QE1-996.5 ,15. Life on land ,lcsh:Geology ,lcsh:QH501-531 ,13. Climate action ,Soil water ,Environmental science ,Permafrost carbon cycle ,lcsh:Ecology ,Surface water - Abstract
As Arctic regions warm and frozen soils thaw, the large organic carbon pool stored in permafrost becomes increasingly vulnerable to decomposition or transport. The transfer of newly mobilized carbon to the atmosphere and its potential influence upon climate change will largely depend on the degradability of carbon delivered to aquatic ecosystems. Dissolved organic carbon (DOC) is a key regulator of aquatic metabolism, yet knowledge of the mechanistic controls on DOC biodegradability is currently poor due to a scarcity of long-term data sets, limited spatial coverage of available data, and methodological diversity. Here, we performed parallel biodegradable DOC (BDOC) experiments at six Arctic sites (16 experiments) using a standardized incubation protocol to examine the effect of methodological differences commonly used in the literature. We also synthesized results from 14 aquatic and soil leachate BDOC studies from across the circum-arctic permafrost region to examine pan-arctic trends in BDOC. An increasing extent of permafrost across the landscape resulted in higher DOC losses in both soil and aquatic systems. We hypothesize that the unique composition of (yedoma) permafrost-derived DOC combined with limited prior microbial processing due to low soil temperature and relatively short flow path lengths and transport times, contributed to a higher overall terrestrial and freshwater DOC loss. Additionally, we found that the fraction of BDOC decreased moving down the fluvial network in continuous permafrost regions, i.e. from streams to large rivers, suggesting that highly biodegradable DOC is lost in headwater streams. We also observed a seasonal (January–December) decrease in BDOC in large streams and rivers, but saw no apparent change in smaller streams or soil leachates. We attribute this seasonal change to a combination of factors including shifts in carbon source, changing DOC residence time related to increasing thaw-depth, increasing water temperatures later in the summer, as well as decreasing hydrologic connectivity between soils and surface water as the thaw season progresses. Our results suggest that future climate warming-induced shifts of continuous permafrost into discontinuous permafrost regions could affect the degradation potential of thaw-released DOC, the amount of BDOC, as well as its variability throughout the Arctic summer. We lastly recommend a standardized BDOC protocol to facilitate the comparison of future work and improve our knowledge of processing and transport of DOC in a changing Arctic.
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- 2015
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224. Megaherbivores may impact expansion of invasive seagrass in the Caribbean.
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Christianen, Marjolijn J. A., Smulders, Fee O. H., Engel, M. Sabine, Nava, Mabel I., Willis, Sue, Debrot, Adolphe O., Palsbøll, Per J., Vonk, J. Arie, Becking, Leontine E., and Van Alstyne, Kathy
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HERBIVORES ,SEAGRASSES ,PLANT invasions ,INTRODUCED species ,GREEN turtle - Abstract
Our knowledge of the functional role of large herbivores is rapidly expanding, and the impact of grazing on species coexistence and nonnative species expansion has been studied across ecosystems. However, experimental data on large grazer impacts on plant invasion in aquatic ecosystems are lacking.Since its introduction in 2002, the seagrass species Halophila stipulacea has rapidly expanded across the Eastern Caribbean, forming dense meadows in green turtle (Chelonia mydas)—foraging areas. We investigate the changes in seagrass species coexistence and the impacts of leaf grazing by green turtles on nonnative seagrass expansion in Lac Bay (Bonaire, Caribbean Netherlands).Green turtle grazing behaviour changed after the introduction of nonnative seagrass to Lac Bay in 2010. Field observations, together with time‐lapse satellite images over the last four decades, showed initiation of new grazing patches (65 ha, an increase of 72%). The sharp border between grazed and ungrazed seagrass patches moved in the direction of shallower areas with native seagrass species that had previously (1970–2010) been ungrazed. Green turtles deployed with Fastloc‐GPS transmitters confirmed high site fidelity to these newly cropped patches. In addition, cafeteria experiments indicated selective grazing by green turtles on native species. These native seagrass species had significantly higher nutritional values compared to the nonnative species. In parallel, exclosure experiments showed that nonnative seagrass expanded more rapidly in grazed canopies compared to ungrazed canopies. Finally, in 6 years from 2011 to 2017, H. stipulacea underwent a significant expansion, invading 20–49 fixed monitoring locations in Lac Bay, increasing from 6% to 20% in total occurrence. During the same period, native seagrass Thalassia testudinum occurrence decreased by 33%.Synthesis. Our results provide first‐time evidence of large‐scale replacement of native seagrasses by rapidly colonizing Halophila stipulacea in the Caribbean and add a mechanistic explanation for this invasiveness. We conclude that green turtle leaf grazing may modify the rate and spatial extent of this invasive species' expansion, due to grazing preferences, and increased space for settlement. This work shows how large herbivores play an important but unrecognized role in species coexistence and plant invasions of aquatic ecosystems. Summary of the impacts of megaherbivores (here green turtles, Chelonia mydas) on invasive expansion (here seagrass Halophila stipulacea), and on seagrass species co‐occurrence following the introduction of H. stipulacea to the Caribbean. In tropical seagrass ecosystems, herbivory can facilitate invasive species expansion by a hypothetical positive feedback mechanism. Green turtles selectively graze on native seagrass species Thalassia testudinum (Figure) that have higher nutritional value (happy emoticon; Figure) and rarely choose to eat invasive seagrass (sad emoticon). By leaf cropping, turtles open up the leaf canopy (i.e., shorter leaves, lower shoot density), which can facilitate the settlement and expansion of invasive seagrass (thicker arrow), as found in our experiments (Figure). As the biomass of native seagrass species gets scarcer, turtles search for new local grazing locations with native seagrass and initiate grazing patches in shallower areas that were previously ungrazed (Figure). As a result, invasive seagrasses can spread into these newly cropped patches in shallow areas (Figure) and may replace native seagrasses. '+': increase. Figure created by MJAC, using images provided by the Integration and Application Network, University of Maryland Center for Environmental Science (ian.umces.edu/imagelibrary/). [ABSTRACT FROM AUTHOR]
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- 2019
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225. Citizen science with small sensor networks. Collaboration between a Dutch EPA (RIVM) and local initiatives
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Bonn, A., Hecker, S., Haklay, M., Robinson, L., Vogel, J., Vohland, K., Volten, H., Devilee, J., Apituley, A., Carton, L.J., Grothe, M., Keller, C., Kresin, F., Land-Zandstra, A., Noordijk, E., Putten, E. van, Rietjes, J., Snik, F., Tielemans, E., Vonk, J., Voogt, M., Wesseling, J., Bonn, A., Hecker, S., Haklay, M., Robinson, L., Vogel, J., Vohland, K., Volten, H., Devilee, J., Apituley, A., Carton, L.J., Grothe, M., Keller, C., Kresin, F., Land-Zandstra, A., Noordijk, E., Putten, E. van, Rietjes, J., Snik, F., Tielemans, E., Vonk, J., Voogt, M., and Wesseling, J.
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Book after the First European Citizen Science Conference, Berlin, 19-21 May 2016, Contains fulltext : 164809pre.pdf (preprint version ) (Open Access), In this chapter, we describe a number of the citizen science projects RIVM took part in. The Smart Emission project in Nijmegen is one of the pilot projects. In this book chapter, we give examples of the lessons learned and the experiences gained. We provide a brief description of the planned innovations of the environmental monitoring, and how these innovations will help to ensure the continuity and effectiveness of citizen science measurements. The initial focus will be on air quality, but we expect that application is possible with other environmental parameters such as noise and water quality, light, vibration, radiation and meteorological parameters. These applications will follow in a later phase of the program. The final goal is to have a hybrid, flexible (air quality) network using different types of sensors, consisting of reference instruments, sensors of intermediate cost and quality, low cost sensors, and satellite observations. The data of this network may be provided by different parties, including citizens groups, cities, NGOs and official measurement institutes. In short, our ambition is to make citizen science data an integral part of standard procedures and models for determining air quality.
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- 2016
226. Combining genomewide association study and lung eQTL analysis provides evidence for novel genes associated with asthma
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Nieuwenhuis, M. A., Siedlinski, M., van den Berge, M., Granell, R., Li, X., Niens, M., van der Vlies, P., Altmüller, J., Nürnberg, P., Kerkhof, M., van Schayck, O. C., Riemersma, R. A., van der Molen, T., de Monchy, J. G., Bossé, Y., Sandford, A., Bruijnzeel-Koomen, C. A., Gerth van Wijk, R., ten Hacken, N. H., Timens, W., Boezen, H. M., Henderson, J., Kabesch, M., Vonk, J. M., Postma, D. S., Koppelman, G. H., Nieuwenhuis, M. A., Siedlinski, M., van den Berge, M., Granell, R., Li, X., Niens, M., van der Vlies, P., Altmüller, J., Nürnberg, P., Kerkhof, M., van Schayck, O. C., Riemersma, R. A., van der Molen, T., de Monchy, J. G., Bossé, Y., Sandford, A., Bruijnzeel-Koomen, C. A., Gerth van Wijk, R., ten Hacken, N. H., Timens, W., Boezen, H. M., Henderson, J., Kabesch, M., Vonk, J. M., Postma, D. S., and Koppelman, G. H.
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- 2016
227. Massive remobilization of permafrost carbon during post-glacial warming
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Tesi, Tommaso, Muschitiello, Francesco, Smittenberg, Rienk H., Jakobsson, Martin, Vonk, J. E., Hill, P., Andersson, August, Kirchner, Nina, Noormets, R., Dudarev, O., Semiletov, I., Gustafsson, Örjan, Tesi, Tommaso, Muschitiello, Francesco, Smittenberg, Rienk H., Jakobsson, Martin, Vonk, J. E., Hill, P., Andersson, August, Kirchner, Nina, Noormets, R., Dudarev, O., Semiletov, I., and Gustafsson, Örjan
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Recent hypotheses, based on atmospheric records and models, suggest that permafrost carbon (PF-C) accumulated during the last glaciation may have been an important source for the atmospheric CO2 rise during post-glacial warming. However, direct physical indications for such PF-C release have so far been absent. Here we use the Laptev Sea (Arctic Ocean) as an archive to investigate PF-C destabilization during the last glacial–interglacial period. Our results show evidence for massive supply of PF-C from Siberian soils as a result of severe active layer deepening in response to the warming. Thawing of PF-C must also have brought about an enhanced organic matter respiration and, thus, these findings suggest that PF-C may indeed have been an important source of CO2 across the extensive permafrost domain. The results challenge current paradigms on the post-glacial CO2 rise and, at the same time, serve as a harbinger for possible consequences of the present-day warming of PF-C soils.
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- 2016
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228. Greenhouse gas emissions in the Netherlands 1990-2014 : National Inventory Report 2016
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L&E, M&V, Coenen PWHG, van der Maas CWM, Zijlema PJ, Arets EJMM, Baas K, van den Berghe ACWM, Nijkamp MM, van Huis EP, Geilenkirchen G, Versluijs CW, te Molder R, Dröge R, Montfoort JA, Peek CJ, Vonk J, Oude Voshaar S, L&E, M&V, Coenen PWHG, van der Maas CWM, Zijlema PJ, Arets EJMM, Baas K, van den Berghe ACWM, Nijkamp MM, van Huis EP, Geilenkirchen G, Versluijs CW, te Molder R, Dröge R, Montfoort JA, Peek CJ, Vonk J, and Oude Voshaar S
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RIVM rapport:In 2014 is de totale uitstoot van broeikasgassen van Nederland met ongeveer 4 procent gedaald ten opzichte van de emissie in 2013. Deze daling komt vooral doordat er als gevolg van de relatief warme winter minder brandstof is gebruikt. De totale emissie van broeikasgassen naar de lucht wordt uitgedrukt in CO2-equivalenten en bedroeg in 2014 187,1 miljard kilogram (megaton of teragram). Ten opzichte van het zogeheten Kyoto-basisjaar (223,8 miljard kilogram CO2-equivalenten) is dit een afname van ongeveer 16,4 procent. Dit basisjaar, dat afhankelijk van het broeikasgas 1990 of 1995 is, dient voor het Kyoto-protocol als referentie voor de uitstoot van broeikasgassen. De afname in de broeikasgasemissies wordt voor het grootste deel (78 procent) veroorzaakt doordat de emissies van methaan, distikstofoxide en gefluoreerde gassen (CH4, N2O en F-gassen) afnemen. De CO2-uitstoot is beduidend minder afgenomen (-3 procent ten opzichte van het basisjaar 1990). Dit blijkt uit een inventarisatie van broeikasgasemissies die het RIVM jaarlijks op verzoek van het ministerie van Infrastructuur en Milieu (IenM) opstelt. Met deze inventarisatie voldoet Nederland aan de nationale rapportageverplichtingen voor 2016 van het Klimaatverdrag van de Verenigde Naties (UNFCCC), van het Kyoto Protocol en van het Bewakingsmechanisme Broeikasgassen van de Europese Unie. De emissiecijfers uit brandstoffen zijn in absolute zin gewijzigd ten opzichte van eerdere rapportages om de Nederlandse cijfers beter te laten aansluiten bij de internationale definities. De inventarisatie bevat verder trendanalyses voor de emissies van broeikasgassen in de periode 1990-2014, een analyse van belangrijkste emissiebronnen ('sleutelbronnen'), evenals de onzekerheid in hun emissies. Daarnaast zijn in de inventarisatie de gebruikte berekeningsmethoden beschreven, evenals databronnen en gebruikte emissiefactoren. Ten slotte bevat het een overzicht van het kwaliteitssysteem en de validatie van de emissiecijfers door de N, Total greenhouse gas (GHG) emissions from the Netherlands in 2014 decreased by approximately 4.1%, compared with 2013 emissions. This decrease was mainly the result of decreased fuel combustion in all sectors as a result of the mild winter. In 2014, total GHG emissions (including indirect CO2 emissions and excluding emissions from Land use, land use change and forestry (LULUCF)) in the Netherlands amounted to 187.1 Tg CO2 eq. This is approximately 16.4% below the emissions in the base year2 (223.8 Tg CO2 eq). This report documents the Netherlands' 2016 annual submission of its greenhouse gas emissions inventory in accordance with the 2006 IPCC Guidelines for National Greenhouse Gas Inventories (IPCC, 2006) provided by the United Nations Framework Convention on Climate Change (UNFCCC), the Kyoto Protocol and the European Union's Greenhouse Gas Monitoring Mechanism. The report includes explanations of observed trends in emissions; an assessment of the sources with the highest contribution to the national emissions (key sources) and the uncertainty in their emissions; an itemization of methods, data sources and emission factors (EFs) applied; and a description of the quality assurance system and the verification activities performed on the data.
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- 2016
229. Networking Our Way to Better Ecosystem Service Provision
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Bohan, David A., Landuyt, Dries, Ma, Athen, Macfadyen, Sarina, Martinet, Vincent, Massol, Francois, McInerny, Greg, Montoya, Jose M., Mulder, Christian, Pascual, Unai, Pocock, Michael J. O., White, Piran, Blanchemanche, Sandrine, Bonkowski, Michael, Bretagnolle, Vincent, Bronmark, Christer, Dicks, Lynn, Dumbrell, Alex, Eisenhauer, Nico, Friberg, Nikolai, Gessner, Mark O., Gill, Richard J., Gray, Clare, Haughton, Alison, Ibanez, Sebastien, Jensen, John, Jeppesen, Erik, Jokela, Jukka, Lacroix, Gerard, Lannou, Christian, Lavorel, Sandra, Le Galliard, Jean-Francois, Lescourret, Francoise, Liu, Shanlin, Loeuille, Nicolas, McLaughlin, Orla, Muggleton, Stephen, Penuelas, Josep, Petanidou, Theodora, Petit, Sandrine, Pomati, Francesco, Raffaelli, Dave, Rasmussen, Jes, Raybould, Alan, Reboud, Xavier, Richard, Guy, Scherber, Christoph, Scheu, Stefan, Sutherland, William J., Tamaddoni-Nezhad, Alireza, ter Braak, Cajo, Termansen, Mette, Thompson, Murray S. A., Tscharntke, Teja, Vacher, Corinne, van der Geest, Harm, Voigt, Winfried, Vonk, J. Arie, Zhou, Xin, Woodward, Guy, Bohan, David A., Landuyt, Dries, Ma, Athen, Macfadyen, Sarina, Martinet, Vincent, Massol, Francois, McInerny, Greg, Montoya, Jose M., Mulder, Christian, Pascual, Unai, Pocock, Michael J. O., White, Piran, Blanchemanche, Sandrine, Bonkowski, Michael, Bretagnolle, Vincent, Bronmark, Christer, Dicks, Lynn, Dumbrell, Alex, Eisenhauer, Nico, Friberg, Nikolai, Gessner, Mark O., Gill, Richard J., Gray, Clare, Haughton, Alison, Ibanez, Sebastien, Jensen, John, Jeppesen, Erik, Jokela, Jukka, Lacroix, Gerard, Lannou, Christian, Lavorel, Sandra, Le Galliard, Jean-Francois, Lescourret, Francoise, Liu, Shanlin, Loeuille, Nicolas, McLaughlin, Orla, Muggleton, Stephen, Penuelas, Josep, Petanidou, Theodora, Petit, Sandrine, Pomati, Francesco, Raffaelli, Dave, Rasmussen, Jes, Raybould, Alan, Reboud, Xavier, Richard, Guy, Scherber, Christoph, Scheu, Stefan, Sutherland, William J., Tamaddoni-Nezhad, Alireza, ter Braak, Cajo, Termansen, Mette, Thompson, Murray S. A., Tscharntke, Teja, Vacher, Corinne, van der Geest, Harm, Voigt, Winfried, Vonk, J. Arie, Zhou, Xin, and Woodward, Guy
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The ecosystem services (EcoS) concept is being used increasingly to attach values to natural systems and the multiple benefits they provide to human societies. Ecosystem processes or functions only become EcoS if they are shown to have social and/or economic value. This should assure an explicit connection between the natural and social sciences, but EcoS approaches have been criticized for retaining little natural science. Preserving the natural, ecological science context within EcoS research is challenging because the multiple disciplines involved have very different traditions and vocabularies (common-language challenge) and span many organizational levels and temporal and spatial scales (scale challenge) that define the relevant interacting entities (interaction challenge). We propose a network-based approach to transcend these discipline challenges and place the natural science context at the heart of EcoS research.
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- 2016
230. A principal component meta-analysis on multiple anthropometric traits identifies novel loci for body shape
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Ried, J. S. (Janina S.), Jeff, J. M. (Janina M.), Chu, A. Y. (Audrey Y.), Bragg-Gresham, J. L. (Jennifer L.), van Dongen, J. (Jenny), Huffman, J. E. (Jennifer E.), Ahluwalia, T. S. (Tarunveer S.), Cadby, G. (Gemma), Eklund, N. (Niina), Eriksson, J. (Joel), Esko, T. (Tonu), Feitosa, M. F. (Mary F.), Goel, A. (Anuj), Gorski, M. (Mathias), Hayward, C. (Caroline), Heard-Costa, N. L. (Nancy L.), Jackson, A. U. (Anne U.), Jokinen, E. (Eero), Kanoni, S. (Stavroula), Kristiansson, K. (Kati), Kutalik, Z. (Zoltan), Lahti, J. (Jari), Luan, J. (Jian'an), Maegi, R. (Reedik), Mahajan, A. (Anubha), Mangino, M. (Massimo), Medina-Gomez, C. (Carolina), Monda, K. L. (Keri L.), Nolte, I. M. (Ilja M.), Perusse, L. (Louis), Prokopenko, I. (Inga), Qi, L. (Lu), Rose, L. M. (Lynda M.), Salvi, E. (Erika), Smith, M. T. (Megan T.), Snieder, H. (Harold), Stancakova, A. (Alena), Sung, Y. J. (Yun Ju), Tachmazidou, I. (Ioanna), Teumer, A. (Alexander), Thorleifsson, G. (Gudmar), van der Harst, P. (Pim), Walker, R. W. (Ryan W.), Wang, S. R. (Sophie R.), Wild, S. H. (Sarah H.), Willems, S. M. (Sara M.), Wong, A. (Andrew), Zhang, W. (Weihua), Albrecht, E. (Eva), Alves, A. C. (Alexessander Couto), Bakker, S. J. (Stephan J. L.), Barlassina, C. (Cristina), Bartz, T. M. (Traci M.), Beilby, J. (John), Bellis, C. (Claire), Bergman, R. N. (Richard N.), Bergmann, S. (Sven), Blangero, J. (John), Blueher, M. (Matthias), Boerwinkle, E. (Eric), Bonnycastle, L. L. (Lori L.), Bornstein, S. R. (Stefan R.), Bruinenberg, M. (Marcel), Campbell, H. (Harry), Chen, Y. I. (Yii-Der Ida), Chiang, C. W. (Charleston W. K.), Chines, P. S. (Peter S.), Collins, F. S. (Francis S.), Cucca, F. (Fracensco), Cupples, L. A. (L. Adrienne), D'Avila, F. (Francesca), de Geus, E. J. (Eco J. C.), Dedoussis, G. (George), Dimitriou, M. (Maria), Doering, A. (Angela), Eriksson, J. G. (Johan G.), Farmaki, A.-E. (Aliki-Eleni), Farrall, M. (Martin), Ferreira, T. (Teresa), Fischer, K. (Krista), Forouhi, N. G. (Nita G.), Friedrich, N. (Nele), Gjesing, A. P. (Anette Prior), Glorioso, N. (Nicola), Graff, M. (Mariaelisa), Grallert, H. (Harald), Grarup, N. (Niels), Graessler, J. (Juergen), Grewal, J. (Jagvir), Hamsten, A. (Anders), Harder, M. N. (Marie Neergaard), Hartman, C. A. (Catharina A.), Hassinen, M. (Maija), Hastie, N. (Nicholas), Hattersley, A. T. (Andrew Tym), Havulinna, A. S. (Aki S.), Heliovaara, M. (Markku), Hillege, H. (Hans), Hofman, A. (Albert), Holmen, O. (Oddgeir), Homuth, G. (Georg), Hottenga, J.-J. (Jouke-Jan), Hui, J. (Jennie), Husemoen, L. L. (Lise Lotte), Hysi, P. G. (Pirro G.), Isaacs, A. (Aaron), Ittermann, T. (Till), Jalilzadeh, S. (Shapour), James, A. L. (Alan L.), Jorgensen, T. (Torben), Jousilahti, P. (Pekka), Jula, A. (Antti), Justesen, J. M. (Johanne Marie), Justice, A. E. (Anne E.), Kahonen, M. (Mika), Karaleftheri, M. (Maria), Khaw, K. T. (Kay Tee), Keinänen-Kiukaanniemi, S. M. (Sirkka M.), Kinnunen, L. (Leena), Knekt, P. B. (Paul B.), Koistinen, H. A. (Heikki A.), Kolcic, I. (Ivana), Kooner, I. K. (Ishminder K.), Koskinen, S. (Seppo), Kovacs, P. (Peter), Kyriakou, T. (Theodosios), Laitinen, T. (Tomi), Langenberg, C. (Claudia), Lewin, A. M. (Alexandra M.), Lichtner, P. (Peter), Lindgren, C. M. (Cecilia M.), Lindstrom, J. (Jaana), Linneberg, A. (Allan), Lorbeer, R. (Roberto), Lorentzon, M. (Mattias), Luben, R. (Robert), Lyssenko, V. (Valeriya), Mannisto, S. (Satu), Manunta, P. (Paolo), Leach, I. M. (Irene Mateo), McArdle, W. L. (Wendy L.), Mcknight, B. (Barbara), Mohlke, K. L. (Karen L.), Mihailov, E. (Evelin), Milani, L. (Lili), Mills, R. (Rebecca), Montasser, M. E. (May E.), Morris, A. P. (Andrew P.), Mueller, G. (Gabriele), Musk, A. W. (Arthur W.), Narisu, N. (Narisu), Ong, K. K. (Ken K.), Oostra, B. A. (Ben A.), Osmond, C. (Clive), Palotie, A. (Aarno), Pankow, J. S. (James S.), Paternoster, L. (Lavinia), Penninx, B. W. (Brenda W.), Pichler, I. (Irene), Pilia, M. G. (Maria G.), Polasek, O. (Ozren), Pramstaller, P. P. (Peter P.), Raitakari, O. T. (Olli T.), Rankinen, T. (Tuomo), Rao, D. C. (D. C.), Rayner, N. W. (Nigel W.), Ribel-Madsen, R. (Rasmus), Rice, T. K. (Treva K.), Richards, M. (Marcus), Ridker, P. M. (Paul M.), Rivadeneira, F. (Fernando), Ryan, K. A. (Kathy A.), Sanna, S. (Serena), Sarzynski, M. A. (Mark A.), Scholtens, S. (Salome), Scott, R. A. (Robert A.), Sebert, S. (Sylvain), Southam, L. (Lorraine), Sparso, T. H. (Thomas Hempel), Steinthorsdottir, V. (Valgerdur), Stirrups, K. (Kathleen), Stolk, R. P. (Ronald P.), Strauch, K. (Konstantin), Stringham, H. M. (Heather M.), Swertz, M. A. (Morris A.), Swift, A. J. (Amy J.), Toenjes, A. (Anke), Tsafantakis, E. (Emmanouil), van der Most, P. J. (Peter J.), Van Vliet-Ostaptchouk, J. V. (Jana V.), Vandenput, L. (Liesbeth), Vartiainen, E. (Erkki), Venturini, C. (Cristina), Verweij, N. (Niek), Viikari, J. S. (Jorma S.), Vitart, V. (Veronique), Vohl, M.-C. (Marie-Claude), Vonk, J. M. (Judith M.), Waeber, G. (Gerard), Widen, E. (Elisabeth), Willemsen, G. (Gonneke), Wilsgaard, T. (Tom), Winkler, T. W. (Thomas W.), Wright, A. F. (Alan F.), Yerges-Armstrong, L. M. (Laura M.), Zhao, J. H. (Jing Hua), Zillikens, M. C. (M. Carola), Boomsma, D. I. (Dorret I.), Bouchard, C. (Claude), Chambers, J. C. (John C.), Chasman, D. I. (Daniel I.), Cusi, D. (Daniele), Gansevoort, R. T. (Ron T.), Gieger, C. (Christian), Hansen, T. (Torben), Hicks, A. A. (Andrew A.), Hu, F. (Frank), Hveem, K. (Kristian), Jarvelin, M.-R. (Marjo-Riitta), Kajantie, E. (Eero), Kooner, J. S. (Jaspal S.), Kuh, D. (Diana), Kuusisto, J. (Johanna), Laakso, M. (Markku), Lakka, T. A. (Timo A.), Lehtimaeki, T. (Terho), Metspalu, A. (Andres), Njolstad, I. (Inger), Ohlsson, C. (Claes), Oldehinkel, A. J. (Albertine J.), Palmer, L. J. (Lyle J.), Pedersen, O. (Oluf), Perola, M. (Markus), Peters, A. (Annette), Psaty, B. M. (Bruce M.), Puolijoki, H. (Hannu), Rauramaa, R. (Rainer), Rudan, I. (Igor), Salomaa, V. (Veikko), Schwarz, P. E. (Peter E. H.), Shudiner, A. R. (Alan R.), Smit, J. H. (Jan H.), Sorensen, T. I. (Thorkild I. A.), Spector, T. D. (Timothy D.), Stefansson, K. (Kari), Stumvoll, M. (Michael), Tremblay, A. (Angelo), Tuomilehto, J. (Jaakko), Uitterlinden, A. G. (Andre G.), Uusitupa, M. (Matti), Voelker, U. (Uwe), Vollenweider, P. (Peter), Wareham, N. J. (Nicholas J.), Watkins, H. (Hugh), Wilson, J. F. (James F.), Zeggini, E. (Eleftheria), Abecasis, G. R. (Goncalo R.), Boehnke, M. (Michael), Borecki, I. B. (Ingrid B.), Deloukas, P. (Panos), van Duijn, C. M. (Cornelia M.), Fox, C. (Caroline), Groop, L. C. (Leif C.), Heid, I. M. (Iris M.), Hunter, D. J. (David J.), Kaplan, R. C. (Robert C.), McCarthy, M. I. (Mark I.), North, K. E. (Kari E.), O'Connell, J. R. (Jeffrey R.), Schlessinger, D. (David), Thorsteinsdottir, U. (Unnur), Strachan, D. P. (David P.), Frayling, T. (Timothy), Hirschhorn, J. N. (Joel N.), Mueller-Nurasyid, M. (Martina), Loos, R. J. (Ruth J. F.), Ried, J. S. (Janina S.), Jeff, J. M. (Janina M.), Chu, A. Y. (Audrey Y.), Bragg-Gresham, J. L. (Jennifer L.), van Dongen, J. (Jenny), Huffman, J. E. (Jennifer E.), Ahluwalia, T. S. (Tarunveer S.), Cadby, G. (Gemma), Eklund, N. (Niina), Eriksson, J. (Joel), Esko, T. (Tonu), Feitosa, M. F. (Mary F.), Goel, A. (Anuj), Gorski, M. (Mathias), Hayward, C. (Caroline), Heard-Costa, N. L. (Nancy L.), Jackson, A. U. (Anne U.), Jokinen, E. (Eero), Kanoni, S. (Stavroula), Kristiansson, K. (Kati), Kutalik, Z. (Zoltan), Lahti, J. (Jari), Luan, J. (Jian'an), Maegi, R. (Reedik), Mahajan, A. (Anubha), Mangino, M. (Massimo), Medina-Gomez, C. (Carolina), Monda, K. L. (Keri L.), Nolte, I. M. (Ilja M.), Perusse, L. (Louis), Prokopenko, I. (Inga), Qi, L. (Lu), Rose, L. M. (Lynda M.), Salvi, E. (Erika), Smith, M. T. (Megan T.), Snieder, H. (Harold), Stancakova, A. (Alena), Sung, Y. J. (Yun Ju), Tachmazidou, I. (Ioanna), Teumer, A. (Alexander), Thorleifsson, G. (Gudmar), van der Harst, P. (Pim), Walker, R. W. (Ryan W.), Wang, S. R. (Sophie R.), Wild, S. H. (Sarah H.), Willems, S. M. (Sara M.), Wong, A. (Andrew), Zhang, W. (Weihua), Albrecht, E. (Eva), Alves, A. C. (Alexessander Couto), Bakker, S. J. (Stephan J. L.), Barlassina, C. (Cristina), Bartz, T. M. (Traci M.), Beilby, J. (John), Bellis, C. (Claire), Bergman, R. N. (Richard N.), Bergmann, S. (Sven), Blangero, J. (John), Blueher, M. (Matthias), Boerwinkle, E. (Eric), Bonnycastle, L. L. (Lori L.), Bornstein, S. R. (Stefan R.), Bruinenberg, M. (Marcel), Campbell, H. (Harry), Chen, Y. I. (Yii-Der Ida), Chiang, C. W. (Charleston W. K.), Chines, P. S. (Peter S.), Collins, F. S. (Francis S.), Cucca, F. (Fracensco), Cupples, L. A. (L. Adrienne), D'Avila, F. (Francesca), de Geus, E. J. (Eco J. C.), Dedoussis, G. (George), Dimitriou, M. (Maria), Doering, A. (Angela), Eriksson, J. G. (Johan G.), Farmaki, A.-E. (Aliki-Eleni), Farrall, M. (Martin), Ferreira, T. (Teresa), Fischer, K. (Krista), Forouhi, N. G. (Nita G.), Friedrich, N. (Nele), Gjesing, A. P. (Anette Prior), Glorioso, N. (Nicola), Graff, M. (Mariaelisa), Grallert, H. (Harald), Grarup, N. (Niels), Graessler, J. (Juergen), Grewal, J. (Jagvir), Hamsten, A. (Anders), Harder, M. N. (Marie Neergaard), Hartman, C. A. (Catharina A.), Hassinen, M. (Maija), Hastie, N. (Nicholas), Hattersley, A. T. (Andrew Tym), Havulinna, A. S. (Aki S.), Heliovaara, M. (Markku), Hillege, H. (Hans), Hofman, A. (Albert), Holmen, O. (Oddgeir), Homuth, G. (Georg), Hottenga, J.-J. (Jouke-Jan), Hui, J. (Jennie), Husemoen, L. L. (Lise Lotte), Hysi, P. G. (Pirro G.), Isaacs, A. (Aaron), Ittermann, T. (Till), Jalilzadeh, S. (Shapour), James, A. L. (Alan L.), Jorgensen, T. (Torben), Jousilahti, P. (Pekka), Jula, A. (Antti), Justesen, J. M. (Johanne Marie), Justice, A. E. (Anne E.), Kahonen, M. (Mika), Karaleftheri, M. (Maria), Khaw, K. T. (Kay Tee), Keinänen-Kiukaanniemi, S. M. (Sirkka M.), Kinnunen, L. (Leena), Knekt, P. B. (Paul B.), Koistinen, H. A. (Heikki A.), Kolcic, I. (Ivana), Kooner, I. K. (Ishminder K.), Koskinen, S. (Seppo), Kovacs, P. (Peter), Kyriakou, T. (Theodosios), Laitinen, T. (Tomi), Langenberg, C. (Claudia), Lewin, A. M. (Alexandra M.), Lichtner, P. (Peter), Lindgren, C. M. (Cecilia M.), Lindstrom, J. (Jaana), Linneberg, A. (Allan), Lorbeer, R. (Roberto), Lorentzon, M. (Mattias), Luben, R. (Robert), Lyssenko, V. (Valeriya), Mannisto, S. (Satu), Manunta, P. (Paolo), Leach, I. M. (Irene Mateo), McArdle, W. L. (Wendy L.), Mcknight, B. (Barbara), Mohlke, K. L. (Karen L.), Mihailov, E. (Evelin), Milani, L. (Lili), Mills, R. (Rebecca), Montasser, M. E. (May E.), Morris, A. P. (Andrew P.), Mueller, G. (Gabriele), Musk, A. W. (Arthur W.), Narisu, N. (Narisu), Ong, K. K. (Ken K.), Oostra, B. A. (Ben A.), Osmond, C. (Clive), Palotie, A. (Aarno), Pankow, J. S. (James S.), Paternoster, L. (Lavinia), Penninx, B. W. (Brenda W.), Pichler, I. (Irene), Pilia, M. G. (Maria G.), Polasek, O. (Ozren), Pramstaller, P. P. (Peter P.), Raitakari, O. T. (Olli T.), Rankinen, T. (Tuomo), Rao, D. C. (D. C.), Rayner, N. W. (Nigel W.), Ribel-Madsen, R. (Rasmus), Rice, T. K. (Treva K.), Richards, M. (Marcus), Ridker, P. M. (Paul M.), Rivadeneira, F. (Fernando), Ryan, K. A. (Kathy A.), Sanna, S. (Serena), Sarzynski, M. A. (Mark A.), Scholtens, S. (Salome), Scott, R. A. (Robert A.), Sebert, S. (Sylvain), Southam, L. (Lorraine), Sparso, T. H. (Thomas Hempel), Steinthorsdottir, V. (Valgerdur), Stirrups, K. (Kathleen), Stolk, R. P. (Ronald P.), Strauch, K. (Konstantin), Stringham, H. M. (Heather M.), Swertz, M. A. (Morris A.), Swift, A. J. (Amy J.), Toenjes, A. (Anke), Tsafantakis, E. (Emmanouil), van der Most, P. J. (Peter J.), Van Vliet-Ostaptchouk, J. V. (Jana V.), Vandenput, L. (Liesbeth), Vartiainen, E. (Erkki), Venturini, C. (Cristina), Verweij, N. (Niek), Viikari, J. S. (Jorma S.), Vitart, V. (Veronique), Vohl, M.-C. (Marie-Claude), Vonk, J. M. (Judith M.), Waeber, G. (Gerard), Widen, E. (Elisabeth), Willemsen, G. (Gonneke), Wilsgaard, T. (Tom), Winkler, T. W. (Thomas W.), Wright, A. F. (Alan F.), Yerges-Armstrong, L. M. (Laura M.), Zhao, J. H. (Jing Hua), Zillikens, M. C. (M. Carola), Boomsma, D. I. (Dorret I.), Bouchard, C. (Claude), Chambers, J. C. (John C.), Chasman, D. I. (Daniel I.), Cusi, D. (Daniele), Gansevoort, R. T. (Ron T.), Gieger, C. (Christian), Hansen, T. (Torben), Hicks, A. A. (Andrew A.), Hu, F. (Frank), Hveem, K. (Kristian), Jarvelin, M.-R. (Marjo-Riitta), Kajantie, E. (Eero), Kooner, J. S. (Jaspal S.), Kuh, D. (Diana), Kuusisto, J. (Johanna), Laakso, M. (Markku), Lakka, T. A. (Timo A.), Lehtimaeki, T. (Terho), Metspalu, A. (Andres), Njolstad, I. (Inger), Ohlsson, C. (Claes), Oldehinkel, A. J. (Albertine J.), Palmer, L. J. (Lyle J.), Pedersen, O. (Oluf), Perola, M. (Markus), Peters, A. (Annette), Psaty, B. M. (Bruce M.), Puolijoki, H. (Hannu), Rauramaa, R. (Rainer), Rudan, I. (Igor), Salomaa, V. (Veikko), Schwarz, P. E. (Peter E. H.), Shudiner, A. R. (Alan R.), Smit, J. H. (Jan H.), Sorensen, T. I. (Thorkild I. A.), Spector, T. D. (Timothy D.), Stefansson, K. (Kari), Stumvoll, M. (Michael), Tremblay, A. (Angelo), Tuomilehto, J. (Jaakko), Uitterlinden, A. G. (Andre G.), Uusitupa, M. (Matti), Voelker, U. (Uwe), Vollenweider, P. (Peter), Wareham, N. J. (Nicholas J.), Watkins, H. (Hugh), Wilson, J. F. (James F.), Zeggini, E. (Eleftheria), Abecasis, G. R. (Goncalo R.), Boehnke, M. (Michael), Borecki, I. B. (Ingrid B.), Deloukas, P. (Panos), van Duijn, C. M. (Cornelia M.), Fox, C. (Caroline), Groop, L. C. (Leif C.), Heid, I. M. (Iris M.), Hunter, D. J. (David J.), Kaplan, R. C. (Robert C.), McCarthy, M. I. (Mark I.), North, K. E. (Kari E.), O'Connell, J. R. (Jeffrey R.), Schlessinger, D. (David), Thorsteinsdottir, U. (Unnur), Strachan, D. P. (David P.), Frayling, T. (Timothy), Hirschhorn, J. N. (Joel N.), Mueller-Nurasyid, M. (Martina), and Loos, R. J. (Ruth J. F.)
- Abstract
Large consortia have revealed hundreds of genetic loci associated with anthropometric traits, one trait at a time. We examined whether genetic variants affect body shape as a composite phenotype that is represented by a combination of anthropometric traits. We developed an approach that calculates averaged PCs (AvPCs) representing body shape derived from six anthropometric traits (body mass index, height, weight, waist and hip circumference, waist-to-hip ratio). The first four AvPCs explain >99% of the variability, are heritable, and associate with cardiometabolic outcomes. We performed genome-wide association analyses for each body shape composite phenotype across 65 studies and meta-analysed summary statistics. We identify six novel loci: LEMD2 and CD47 for AvPC1, RPS6KA5/C14orf159 and GANAB for AvPC3, and ARL15 and ANP32 for AvPC4. Our findings highlight the value of using multiple traits to define complex phenotypes for discovery, which are not captured by single-trait analyses, and may shed light onto new pathways.
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- 2016
231. Combining genomewide association study and lung eQTL analysis provides evidence for novel genes associated with asthma
- Author
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MS Dermatologie/Allergologie, Infection & Immunity, DIGD-Medisch 1, Nieuwenhuis, M. A., Siedlinski, M., van den Berge, M., Granell, R., Li, X., Niens, M., van der Vlies, P., Altmüller, J., Nürnberg, P., Kerkhof, M., van Schayck, O. C., Riemersma, R. A., van der Molen, T., de Monchy, J. G., Bossé, Y., Sandford, A., Bruijnzeel-Koomen, C. A., Gerth van Wijk, R., ten Hacken, N. H., Timens, W., Boezen, H. M., Henderson, J., Kabesch, M., Vonk, J. M., Postma, D. S., Koppelman, G. H., MS Dermatologie/Allergologie, Infection & Immunity, DIGD-Medisch 1, Nieuwenhuis, M. A., Siedlinski, M., van den Berge, M., Granell, R., Li, X., Niens, M., van der Vlies, P., Altmüller, J., Nürnberg, P., Kerkhof, M., van Schayck, O. C., Riemersma, R. A., van der Molen, T., de Monchy, J. G., Bossé, Y., Sandford, A., Bruijnzeel-Koomen, C. A., Gerth van Wijk, R., ten Hacken, N. H., Timens, W., Boezen, H. M., Henderson, J., Kabesch, M., Vonk, J. M., Postma, D. S., and Koppelman, G. H.
- Published
- 2016
232. Referentieraming van emissies naar lucht uit de landbouw tot 2030 : achtergronddocument bij de Nationale Energieverkenning 2015, met emissies van ammoniak, methaan, lachgas, stikstofoxide en fijnstof uit de landbouw tot 2030
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Velthof, G.L., van Bruggen, C., Groenestein, C.M., Huijsmans, J.F.M., Luesink, H.H., van der Sluis, S.M., van der Kolk, J.W.H., Oude Voshaar, S.V., Vonk, J., van Schijndel, M.W., Velthof, G.L., van Bruggen, C., Groenestein, C.M., Huijsmans, J.F.M., Luesink, H.H., van der Sluis, S.M., van der Kolk, J.W.H., Oude Voshaar, S.V., Vonk, J., and van Schijndel, M.W.
- Published
- 2016
233. Methodology for estimating emissions from agriculture in the Netherlands. : Calculations of CH4, NH3, N2O, NOx, PM10, PM2.5 and CO2 with the National Emission Model for Agriculture (NEMA)
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Vonk, J., Bannink, A., van Bruggen, C., Groenestein, C.M., Huijsmans, J.F.M., van der Kolk, J.W.H., Luesink, H.H., Oude Voshaar, S.V., Sluis, S.M., Velthof, G.L., Vonk, J., Bannink, A., van Bruggen, C., Groenestein, C.M., Huijsmans, J.F.M., van der Kolk, J.W.H., Luesink, H.H., Oude Voshaar, S.V., Sluis, S.M., and Velthof, G.L.
- Abstract
The National Emission Model for Agriculture (NEMA) is used to calculate emissions to air from agricultural activities in the Netherlands on a national scale. Emissions of ammonia (NH3) and other N-compounds (NOx and N2O) from animal housing, manure storage, manure application and grazing are assessed using a Total Ammoniacal Nitrogen (TAN) flow model. Furthermore, emissions from application of inorganic N-fertilizer, compost and sewage sludge, cultivation of organic soils, crop residues, and ripening of crops are calculated. NEMA is also used to estimate emissions of methane (CH4) from enteric fermentation and manure management, particulate matter (PM) from manure management and agricultural soils, and carbon dioxide(CO2) from liming. Emissions are calculated in accordance with international guidance criteria and reported in an annual Informative Inventory Report (IIR; for air pollutants) and National Inventory Report (NIR; for greenhouse gases). This methodology report describes the outline and backgrounds of the emissioncalculations with NEMA
- Published
- 2016
234. NOS1: A Susceptibility Gene for Reduced Level of FEV1 in the Setting of Pesticide Exposure
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de Jong, K, Vonk, J M, Kromhout, H, Vermeulen, R, Postma, D S, Boezen, H M, LS IRAS EEPI EXAS (Arb.hyg+bl.st.kar.), LS IRAS EEPI GRA (Gezh.risico-analyse), Risk Assessment of Toxic and Immunomodulatory Agents, IRAS RATIA-SIB, IRAS RATIA2, Groningen Research Institute for Asthma and COPD (GRIAC), Life Course Epidemiology (LCE), and Groningen Institute for Gastro Intestinal Genetics and Immunology (3GI)
- Subjects
Adult ,Male ,Pulmonary and Respiratory Medicine ,Adolescent ,NOS1 ,Vital Capacity ,Susceptibility gene ,Nitric Oxide Synthase Type I ,Critical Care and Intensive Care Medicine ,Polymorphism, Single Nucleotide ,Cohort Studies ,Young Adult ,Forced Expiratory Volume ,Occupational Exposure ,Humans ,Medicine ,Genetic Predisposition to Disease ,Pesticides ,Aged ,Netherlands ,Aged, 80 and over ,business.industry ,Middle Aged ,Pesticide ,Immunology ,Female ,business - Published
- 2014
235. Mapping atmospheric aerosols with a citizen science network of smartphone spectropolarimeters
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Snik, F., Rietjens, J.H.H., Apituley, A., Volten, H., Mijling, B., Di Noia, A., Heikamp, S., Heinsbroek, R.C., Hasekamp, O.P., Smit, J.M., Vonk, J., Stam, D.M., Van Harten, G., De Boer, J., Keller, C.U., and Earth and Climate
- Subjects
citizen science ,aerosols ,smartphones ,SDG 11 - Sustainable Cities and Communities ,polarimetry - Abstract
To assess the impact of atmospheric aerosols on health, climate, and air traffic, aerosol properties must be measured with fine spatial and temporal sampling. This can be achieved by actively involving citizens and the technology they own to form an atmospheric measurement network. We establish this new measurement strategy by developing and deploying iSPEX, a low-cost, mass-producible optical add-on for smartphones with a corresponding app. The aerosol optical thickness (AOT) maps derived from iSPEX spectropolarimetric measurements of the daytime cloud-free sky by thousands of citizen scientists throughout the Netherlands are in good agreement with the spatial AOT structure derived from satellite imagery and temporal AOT variations derived from ground-based precision photometry. These maps show structures at scales of kilometers that are typical for urban air pollution, indicating the potential of iSPEX to provide information about aerosol properties at locations and at times that are not covered by current monitoring efforts. Key Points The iSPEX add-on turns smartphones into aerosol measurement devicesThousands of iSPEX measurements across the Netherlands form AOT mapsThe iSPEX AOT data match MODIS and AERONET data and have 2 km resolution
- Published
- 2014
- Full Text
- View/download PDF
236. Climate change and the permafrost carbon feedback
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Schuur, E. A G, McGuire, A. D., Schädel, C., Grosse, G., Harden, J. W., Hayes, D. J., Hugelius, G., Koven, C. D., Kuhry, P., Lawrence, D. M., Natali, S. M., Olefeldt, D., Romanovsky, V. E., Schaefer, K., Turetsky, M. R., Treat, C. C., Vonk, J. E., Organic geochemistry, NWO-VENI: Ancient organic matter that matters: The fate of Siberian Yedoma deposits, Organic geochemistry, and NWO-VENI: Ancient organic matter that matters: The fate of Siberian Yedoma deposits
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010504 meteorology & atmospheric sciences ,Climate Change ,Yedoma ,Climate change ,chemistry.chemical_element ,Permafrost ,010501 environmental sciences ,Atmospheric sciences ,01 natural sciences ,Methane ,Carbon Cycle ,Feedback ,chemistry.chemical_compound ,Freezing ,SDG 13 - Climate Action ,Seawater ,General ,0105 earth and related environmental sciences ,Medicine(all) ,Multidisciplinary ,Arctic Regions ,Uncertainty ,Carbon Dioxide ,chemistry ,13. Climate action ,Greenhouse gas ,Carbon dioxide ,Permafrost carbon cycle ,Carbon - Abstract
Large quantities of organic carbon are stored in frozen soils (permafrost) within Arctic and sub-Arctic regions. A warming climate can induce environmental changes that accelerate the microbial breakdown of organic carbon and the release of the greenhouse gases carbon dioxide and methane. This feedback can accelerate climate change, but the magnitude and timing of greenhouse gas emission from these regions and their impact on climate change remain uncertain. Here we find that current evidence suggests a gradual and prolonged release of greenhouse gas emissions in a warming climate and present a research strategy with which to target poorly understood aspects of permafrost carbon dynamics.
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- 2014
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237. Eutrophication decreases distance decay of similarity in diatom communities
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Goldenberg Vilar, Alejandra, Admiraal, Wim, van Dam, Herman, Vonk, J. Arie, van der geest, Harm, van Loon, Emiel, Palaeo-ecologie, and Coastal dynamics, Fluvial systems and Global change
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turnover ,beta diversity ,distance decay ,microorganisms ,diatoms - Abstract
The distance–decay relationship has been claimed to be a predictor for biological diversity because it unites several ecological phenomena such as dispersal ability and environmental structure. The effect of long-term disturbances on distance decay, however, has been widely overlooked, especially for microorganisms. We examine the effect of eutrophication on the distance–decay relationship in communities of attached diatoms in three peatland areas: mesotrophic, eutrophic and hypertrophic. The study follows a spatially explicit sampling scheme, collecting evenly spaced samples along 6-km sampling tracks. The three areas shared 24% of the total number of species, but the different nutrient levels in the three areas are reflected by the prominence of low profile and planktonic diatom species. Our study demonstrates that eutrophication can affect distance–decay relationships by decreasing turnover rates in microorganisms. Diatom communities are shown to be constrained by both environmental and spatial features, whose relative importance depends on the degree of eutrophication. Under eutrophic conditions, species are filtered from the regional species pool and community structure responds strongly to environmental factors (water chemistry variables and depth), while in mesotrophic environments, purely spatial processes play a prominent role in structuring diatom communities. These findings reveal that homogenisation of communities triggered by environmental disturbance is an ecological phenomenon of importance in the microbial world.
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- 2014
238. Emissies naar lucht uit de landbouw in 2012 : berekeningen van ammoniak, stikstofoxide, lachgas, methaan en fijn stof met het model NEMA
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van Bruggen, C., Bannink, A., Groenestein, C.M., de Haan, B.J., Huijsmans, J.F.M., Luesink, H.H., Sluis, S.M., Velthof, G.L., and Vonk, J.
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LEI SECT & OND - Duurzame Ontwikkeling Agrosectoren ,methaanproductie ,Animal Nutrition ,LR - Environment ,animal manures ,LR - Milieu ,air pollution ,netherlands ,intensieve veehouderij ,methane production ,nitrogen ,nederland ,models ,emission ,ammoniakemissie ,Duurzaam Bodemgebruik ,dierlijke meststoffen ,Agro Field Technology Innovations ,fijn stof ,modellen ,agriculture ,Sustainable Soil Use ,particulate matter ,ammonia emission ,Diervoeding ,emissie ,landbouw ,stikstof ,WOT Natuur & Milieu ,intensive livestock farming ,luchtverontreiniging - Abstract
Landbouwkundige activiteiten zijn een belangrijke bron van ammoniak (NH3), stikstofoxide (NO), lachgas (N2O), methaan (CH4) en fijn stof in Nederland. De emissies voor de periode 1990-2012 zijn berekend met NEMA. In 2013 is NEMA uitgebreid met modules voor N2O, NO, CH4 en fijn stof. De rekenmethodiek gaat bij de berekening van de ammoniakemissie uit van de hoeveelheid totaal ammoniakaal stikstof (TAN) in de mest. De ammoniakemissie uit dierlijke mest en kunstmest bedroeg in 2012 ruim 108 miljoen kg NH3, 5 miljoen kg minder dan in 2011, voornamelijk door een lagere stikstofuitscheiding in dierlijke mest en een toename van de mestexport. In lijn hiermee nam de N2O-emissie af van 22,4 tot 21,7 miljoen kg. De NO-emissie nam af van 19,9 naar 19,1 miljoen kg. Sinds 1990 is de ammoniakemissie uit dierlijke mest en kunstmest met bijna 70% gedaald, vooral door een lagere stikstofuitscheiding door landbouwhuisdieren en emissiearme toedieningstechnieken. Lachgas en stikstofoxiden daalden in dezelfde periode eveneens, maar minder scherp (ca. 40%) vanwege hogere emissies door ondergronds aanwenden van mest (N2O) en door de omschakeling van stalsystemen met dunne naar droge mest bij pluimvee (N2O en NO). De totale emissie van methaan veranderde tussen 2011 en 2012 nauwelijks, en komt uit op 437,3 miljoen kg. Tussen 1990 en 2012 daalde de emissie met 14%, wat vrijwel geheel verklaard kan worden door een afname in de dieraantallen. Fijn stof ten slotte, daalde van 6,6 naar 6,4 miljoen kg PM10 als gevolg van het toenemende aandeel stallen met luchtwasser. Hiervan is 0,6 miljoen kg PM2,5.
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- 2014
239. PTTG1IP and MAML3, novel genomewide association study genes for severity of hyperresponsiveness in adult asthma
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Nieuwenhuis, M. A. E., primary, Vonk, J. M., additional, Himes, B. E., additional, Sarnowski, C., additional, Minelli, C., additional, Jarvis, D., additional, Bouzigon, E., additional, Nickle, D. C., additional, Laviolette, M., additional, Sin, D., additional, Weiss, S. T., additional, van den Berge, M., additional, Koppelman, G. H., additional, and Postma, D. S., additional
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- 2016
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240. The significance of linoleic acid in food sources for detritivorous benthic invertebrates
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Vonk, J. Arie, primary, van Kuijk, Bernd F., additional, van Beusekom, Mick, additional, Hunting, Ellard R., additional, and Kraak, Michiel H. S., additional
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- 2016
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241. Greenhouse Gas Emissions from Reservoir Water Surfaces: A New Global Synthesis
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Deemer, Bridget R., primary, Harrison, John A., additional, Li, Siyue, additional, Beaulieu, Jake J., additional, DelSontro, Tonya, additional, Barros, Nathan, additional, Bezerra-Neto, José F., additional, Powers, Stephen M., additional, dos Santos, Marco A., additional, and Vonk, J. Arie, additional
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- 2016
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242. Combining genomewide association study and lung eQTL analysis provides evidence for novel genes associated with asthma
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Nieuwenhuis, M. A., primary, Siedlinski, M., additional, van den Berge, M., additional, Granell, R., additional, Li, X., additional, Niens, M., additional, van der Vlies, P., additional, Altmüller, J., additional, Nürnberg, P., additional, Kerkhof, M., additional, van Schayck, O. C., additional, Riemersma, R. A., additional, van der Molen, T., additional, de Monchy, J. G., additional, Bossé, Y., additional, Sandford, A., additional, Bruijnzeel-Koomen, C. A., additional, Gerth van Wijk, R., additional, ten Hacken, N. H., additional, Timens, W., additional, Boezen, H. M., additional, Henderson, J., additional, Kabesch, M., additional, Vonk, J. M., additional, Postma, D. S., additional, and Koppelman, G. H., additional
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- 2016
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243. Experimental Concepts
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Esser, H. O., primary, Hemingway, R. J., additional, Klein, W., additional, Sharp, D. B., additional, Vonk, J. W., additional, and Holland, P. T., additional
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- 2016
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244. Conclusions
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Esser, H. O., primary, Hemingway, R. J., additional, Klein, W., additional, Sharp, D. B., additional, Vonk, J. W., additional, and Holland, P. T., additional
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- 2016
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245. Factors Influencing Environmental Rehaviour
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Esser, H. O., primary, Hemingway, R. J., additional, Klein, W., additional, Sharp, D. B., additional, Vonk, J. W., additional, and Holland, P. T., additional
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- 2016
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246. Recommended Approach to the Evaluation of the Environmental Behaviour of Pesticides (IUPAC Reports on Pesticides, No. 24)
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Esser, H. O., primary, Hemingway, R. J., additional, Klein, W., additional, Sharp, D. B., additional, Vonk, J. W., additional, and Holland, P. T., additional
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- 2016
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247. Recommended Approach
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Esser, H. O., primary, Hemingway, R. J., additional, Klein, W., additional, Sharp, D. B., additional, Vonk, J. W., additional, and Holland, P. T., additional
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- 2016
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248. Effects of agricultural practices on organic matter degradation in ditches
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Hunting, Ellard R., primary, Vonk, J. Arie, additional, Musters, C.J.M., additional, Kraak, Michiel H.S., additional, and Vijver, Martina G., additional
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- 2016
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249. Climate change and the permafrost carbon feedback
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Schuur, E. A G, McGuire, A. D., Schädel, C., Grosse, G., Harden, J. W., Hayes, D. J., Hugelius, G., Koven, C. D., Kuhry, P., Lawrence, D. M., Natali, S. M., Olefeldt, D., Romanovsky, V. E., Schaefer, K., Turetsky, M. R., Treat, C. C., Vonk, J. E., Schuur, E. A G, McGuire, A. D., Schädel, C., Grosse, G., Harden, J. W., Hayes, D. J., Hugelius, G., Koven, C. D., Kuhry, P., Lawrence, D. M., Natali, S. M., Olefeldt, D., Romanovsky, V. E., Schaefer, K., Turetsky, M. R., Treat, C. C., and Vonk, J. E.
- Abstract
Large quantities of organic carbon are stored in frozen soils (permafrost) within Arctic and sub-Arctic regions. A warming climate can induce environmental changes that accelerate the microbial breakdown of organic carbon and the release of the greenhouse gases carbon dioxide and methane. This feedback can accelerate climate change, but the magnitude and timing of greenhouse gas emission from these regions and their impact on climate change remain uncertain. Here we find that current evidence suggests a gradual and prolonged release of greenhouse gas emissions in a warming climate and present a research strategy with which to target poorly understood aspects of permafrost carbon dynamics.
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- 2015
250. Multi-molecular tracers of terrestrial carbon transfer across the pan-Arctic : comparison of hydrolyzable components with plant wax lipids and lignin phenols
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Feng, X., Gustafsson, Örjan, Holmes, R. M., Vonk, J. E., van Dongen, B. E., Semiletov, I. P., Dudarev, O. V., Yunker, M. B., Macdonald, R. W., Montluon, D. B., Eglinton, T. I., Feng, X., Gustafsson, Örjan, Holmes, R. M., Vonk, J. E., van Dongen, B. E., Semiletov, I. P., Dudarev, O. V., Yunker, M. B., Macdonald, R. W., Montluon, D. B., and Eglinton, T. I.
- Abstract
Hydrolyzable organic carbon (OC) comprises a significant component of sedimentary particulate matter transferred from land into oceans via rivers. Its abundance and nature are however not well studied in Arctic river systems, and yet may represent an important pool of carbon whose fate remains unclear in the context of mobilization and related processes associated with a changing climate. Here, we examine the molecular composition and source of hydrolyzable compounds isolated from sedimentary particles derived from nine rivers across the pan-Arctic. Bound fatty acids (b-FAs), hydroxy FAs, n-alkane-alpha,omega-dioic acids (DAs) and phenols were the major components released upon hydrolysis of these sediments. Among them, b-FAs received considerable inputs from bacterial and/or algal sources, whereas omega-hydroxy FAs, mid-chain substituted acids, DAs, and hydrolyzable phenols were mainly derived from cutin and suberin of higher plants. We further compared the distribution and fate of suberin- and cutin-derived compounds with those of other terrestrial biomarkers (plant wax lipids and lignin phenols) from the same Arctic river sedimentary particles and conducted a benchmark assessment of several biomarker-based indicators of OC source and extent of degradation. While suberin-specific biomarkers were positively correlated with plant-derived high-molecular-weight (HMW) FAs, lignin phenols were correlated with cutin-derived compounds. These correlations suggest that, similar to leaf-derived cutin, lignin was mainly derived from litter and surface soil horizons, whereas suberin and HMW FAs incorporated significant inputs from belowground sources (roots and deeper soil). This conclusion is supported by the negative correlation between lignin phenols and the ratio of suberin-to-cutin biomarkers. Furthermore, the molecular composition of investigated biomarkers differed between Eurasian and North American Arctic rivers: while lignin dominated in the terrestrial OC of Eurasia
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- 2015
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