453 results on '"Shimono K"'
Search Results
202. Structural basis for the slow photocycle and late proton release in Acetabularia rhodopsin I from the marine plant Acetabularia acetabulum.
- Author
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Furuse M, Tamogami J, Hosaka T, Kikukawa T, Shinya N, Hato M, Ohsawa N, Kim SY, Jung KH, Demura M, Miyauchi S, Kamo N, Shimono K, Kimura-Someya T, Yokoyama S, and Shirouzu M
- Subjects
- Crystallography, X-Ray, Light, Models, Molecular, Protein Conformation, Protons, Acetabularia chemistry, Plant Proteins chemistry, Rhodopsin chemistry
- Abstract
Although many crystal structures of microbial rhodopsins have been solved, those with sufficient resolution to identify the functional water molecules are very limited. In this study, the Acetabularia rhodopsin I (ARI) protein derived from the marine alga A. acetabulum was synthesized on a large scale by the Escherichia coli cell-free membrane-protein production method, and crystal structures of ARI were determined at the second highest (1.52-1.80 Å) resolution for a microbial rhodopsin, following bacteriorhodopsin (BR). Examinations of the photochemical properties of ARI revealed that the photocycle of ARI is slower than that of BR and that its proton-transfer reactions are different from those of BR. In the present structures, a large cavity containing numerous water molecules exists on the extracellular side of ARI, explaining the relatively low pKa of Glu206(ARI), which cannot function as an initial proton-releasing residue at any pH. An interhelical hydrogen bond exists between Leu97(ARI) and Tyr221(ARI) on the cytoplasmic side, which facilitates the slow photocycle and regulates the pKa of Asp100(ARI), a potential proton donor to the Schiff base, in the dark state.
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- 2015
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203. Nationwide survey of glucose transporter-1 deficiency syndrome (GLUT-1DS) in Japan.
- Author
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Ito Y, Takahashi S, Kagitani-Shimono K, Natsume J, Yanagihara K, Fujii T, and Oguni H
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- Adolescent, Adult, Carbohydrate Metabolism, Inborn Errors genetics, Child, Child, Preschool, Female, Glucose Transporter Type 1 genetics, Humans, Incidence, Japan epidemiology, Male, Monosaccharide Transport Proteins genetics, Surveys and Questionnaires, Carbohydrate Metabolism, Inborn Errors epidemiology, Monosaccharide Transport Proteins deficiency
- Abstract
Objectives: We conducted a nationwide survey of glucose transporter type-1 deficiency syndrome (GLUT-1DS) in Japan in order to clarify its incidence as well as clinical and laboratory information., Subjects and Methods: A questionnaire to survey the number of genetically and clinically confirmed cases of GLUT-1DS was sent to 1018 board-certified pediatric neurologists, which resulted in 57 patients being reported. We obtained the clinical and laboratory data of 33 patients through a secondary questionnaire., Results: The age of the 33 patients (male: 15, female: 18) at the time of the study ranged between 3 and 35 years (mean: 13.5 years). The age of these patients at the onset of initial neurological symptoms ranged between the neonatal period and 48 months (mean: 9.4 months). GLUT-1DS was diagnosed at a mean age of 8.4 years (range: 1 year to 33 years). The initial symptom was convulsive seizures, which occurred in 15 cases, and was followed by abnormal eye movements in 7 cases and apneic or cyanotic attacks in 4 cases. The latter two symptoms most frequently occurred early in infancy. Thirty-two patients (97%) exhibited some type of epileptic seizure. Neurological findings revealed that most patients had muscle hypotonia, cerebellar ataxia, dystonia, and spastic paralysis. Mild to severe mental retardation was detected in all 33 cases. Furthermore, paroxysmal episodes of ataxia, dystonia/dyskinesia, and motor paralysis were described in approximately 1/3 of all patients. The factors that frequently aggravated these events were hunger, exercise, fever, and fatigue, in that order. The mean CSF/blood glucose ratio was 0.36 (0.28-0.48). Pathological mutations in the SLC2A1 gene were identified in 28 out of 32 cases (87.5%)., Conclusion: The results described herein provided an insight into the early diagnosis of GLUT1-DS, including unexplained paroxysmal abnormal eye movements, apneic/cyanotic attacks, and convulsive seizures in infancy, as well as uncommon paroxysmal events (ataxia, atonia, and motor paralysis) in childhood., (Copyright © 2014 The Japanese Society of Child Neurology. Published by Elsevier B.V. All rights reserved.)
- Published
- 2015
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204. Kinetics of co-crystal formation with caffeine and citric acid via liquid-assisted grinding analyzed using the distinct element method.
- Author
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Shimono K, Kadota K, Tozuka Y, Shimosaka A, Shirakawa Y, and Hidaka J
- Subjects
- Calorimetry, Differential Scanning, Chemistry, Pharmaceutical, Crystallization, Crystallography, X-Ray, Kinetics, Powder Diffraction, Spectroscopy, Fourier Transform Infrared, Caffeine chemistry, Citric Acid chemistry, Models, Chemical, Technology, Pharmaceutical methods
- Abstract
The kinetics of co-crystal formation of caffeine (CF) with citric acid (CTA) was evaluated. Ball milling of CF and CTA in molar ratios of 4:1, 3:1, 2:1, 1:1, 1:2, 1:3, and 1:4 was performed by the liquid-assisted grinding (LAG) method. The samples were characterized by powder X-ray diffraction (PXRD), Fourier transform infrared spectroscopy (FT-IR) and differential scanning calorimetry (DSC). Two types of co-crystals (co-crystal-1, a 1:1 CF-CTA co-crystal; and co-crystal-2, a new co-crystal form) were obtained. The kinetic characteristics of this new co-crystal formation were assessed by calculating the ball impact energy and force using the distinct element method (DEM) simulations. The results indicated that co-crystal-2 creation occurred under a condition in which the ball impact force exceeded a certain threshold value. Moreover, the total ball impact energy was positively correlated with co-crystal formation, exhibiting a higher ball impact force than the threshold value. The kinetics of co-crystal-2 formation was almost consistent with the Jander equation. Consequently, co-crystal-2 formation could be explained according to a three-dimensional diffusion mechanism., (Copyright © 2015 Elsevier B.V. All rights reserved.)
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- 2015
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205. Compromised maturation of GABAergic inhibition underlies abnormal network activity in the hippocampus of epileptic Ca2+ channel mutant mice, tottering.
- Author
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Nakao A, Miki T, Shimono K, Oka H, Numata T, Kiyonaka S, Matsushita K, Ogura H, Niidome T, Noebels JL, Wakamori M, Imoto K, and Mori Y
- Subjects
- Action Potentials, Animals, CA3 Region, Hippocampal cytology, CA3 Region, Hippocampal growth & development, CA3 Region, Hippocampal physiopathology, Calcium Channels, N-Type genetics, Cells, Cultured, Chlorides metabolism, Epilepsy metabolism, Epilepsy physiopathology, GABAergic Neurons physiology, Mice, Mice, Inbred C57BL, RNA, Messenger genetics, RNA, Messenger metabolism, Receptors, GABA-A genetics, gamma-Aminobutyric Acid metabolism, CA3 Region, Hippocampal metabolism, Calcium Channels, N-Type metabolism, Epilepsy genetics, GABAergic Neurons metabolism, Neural Inhibition, Receptors, GABA-A metabolism
- Abstract
Cholinergically induced network activity is a useful analogue of theta rhythms involved in memory processing or epileptiform activity in the hippocampus, providing a powerful tool to elucidate the mechanisms of synchrony in neuronal networks. In absence epilepsy, although its association with cognitive impairments has been reported, the mechanisms underlying hippocampal synchrony remain poorly investigated. Here we simultaneously recorded electrical activities from 64 sites in hippocampal slices of CaV2.1 Ca(2+) channel mutant tottering (tg) mice, a well-established mouse model of spontaneous absence epilepsy, to analyze the spatiotemporal pattern of cholinergically induced hippocampal network activity. The cholinergic agonist carbachol induced oscillatory discharges originating from the CA3 region. In tg/tg mice, this hippocampal network activity was characterized by enhanced occupancy of discharges of relatively high frequency (6-10 Hz) compared to the wild type. Pharmacological analyses of slices, patch clamp electrophysiological characterization of isolated neurons, and altered patterns of hippocampal GABAA receptor subunit and Cl(-) transporter messenger RNA (mRNA) transcript levels revealed that this abnormality is attributable to a developmental retardation of GABAergic inhibition caused by immature intracellular Cl(-) regulation. These results suggest that the inherited CaV2.1 Ca(2+) channel mutation leads to developmental abnormalities in Cl(-) transporter expression and GABAA receptor compositions in hippocampal neurons and that compromised maturation of GABAergic inhibition contributes to the abnormal synchrony in the hippocampus of tg absence epileptic mice.
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- 2015
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206. Converting a light-driven proton pump into a light-gated proton channel.
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Inoue K, Tsukamoto T, Shimono K, Suzuki Y, Miyauchi S, Hayashi S, Kandori H, and Sudo Y
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- Animals, Cell Membrane metabolism, Cytoplasm metabolism, Female, Halorhodopsins chemistry, Hydrophobic and Hydrophilic Interactions, Light, Mutation, Oocytes metabolism, Proton Pumps metabolism, Protons, Recombinant Proteins chemistry, Recombinant Proteins genetics, Recombinant Proteins metabolism, Retinaldehyde metabolism, Rhodopsin genetics, Rhodopsins, Microbial chemistry, Rhodopsins, Microbial genetics, Rhodopsins, Microbial metabolism, Sensory Rhodopsins chemistry, Spectroscopy, Fourier Transform Infrared, Structure-Activity Relationship, Xenopus, Proton Pumps chemistry, Rhodopsin chemistry, Rhodopsin metabolism
- Abstract
There are two types of membrane-embedded ion transport machineries in nature. The ion pumps generate electrochemical potential by energy-coupled active ion transportation, while the ion channels produce action potential by stimulus-dependent passive ion transportation. About 80% of the amino acid residues of the light-driven proton pump archaerhodopsin-3 (AR3) and the light-gated cation channel channelrhodopsin (ChR) differ although they share the close similarity in architecture. Therefore, the question arises: How can these proteins function differently? The absorption maxima of ion pumps are red-shifted about 30-100 nm compared with ChRs, implying a structural difference in the retinal binding cavity. To modify the cavity, a blue-shifted AR3 named AR3-T was produced by replacing three residues located around the retinal (i.e., M128A, G132V, and A225T). AR3-T showed an inward H(+) flux across the membrane, raising the possibility that it works as an inward H(+) pump or an H(+) channel. Electrophysiological experiments showed that the reverse membrane potential was nearly zero, indicating light-gated ion channeling activity of AR3-T. Spectroscopic characterization of AR3-T revealed similar photochemical properties to some of ChRs, including an all-trans retinal configuration, a strong hydrogen bond between the protonated retinal Schiff base and its counterion, and a slow photocycle. From these results, we concluded that the functional determinant in the H(+) transporters is localized at the center of the membrane-spanning domain, but not in the cytoplasmic and extracellular domains.
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- 2015
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207. Prognostic factors for acute encephalopathy with bright tree appearance.
- Author
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Azuma J, Nabatame S, Nakano S, Iwatani Y, Kitai Y, Tominaga K, Kagitani-Shimono K, Okinaga T, Yamamoto T, Nagai T, and Ozono K
- Subjects
- Acute Disease, Anti-Anxiety Agents therapeutic use, Brain Diseases complications, Child, Child, Preschool, Creatinine blood, Diazepam therapeutic use, Epilepsy complications, Humans, Infant, L-Lactate Dehydrogenase blood, Magnetic Resonance Imaging, Magnetic Resonance Spectroscopy, Midazolam therapeutic use, Retrospective Studies, Brain metabolism, Brain pathology, Brain Diseases blood, Brain Diseases diagnosis
- Abstract
Objective: To determine the prognostic factors for encephalopathy with bright tree appearance (BTA) in the acute phase through retrospective case evaluation., Methods: We recruited 10 children with encephalopathy who presented with BTA and classified them into 2 groups. Six patients with evident regression and severe psychomotor developmental delay after encephalopathy were included in the severe group, while the remaining 4 patients with mild mental retardation were included in the mild group. We retrospectively analyzed their clinical symptoms, laboratory data, and magnetic resonance imaging (MRI) and magnetic resonance spectroscopy (MRS) findings., Results: Patients in the severe group developed subsequent complications such as epilepsy and severe motor impairment. Univariate analysis revealed that higher maximum lactate dehydrogenase (LDH) levels (p=0.055) were a weak predictor of poor outcome. Maximum creatinine levels were significantly higher (p<0.05) and minimal platelet counts were significantly lower (p<0.05) in the severe group than in the mild group. Acute renal failure was not observed in any patient throughout the study. MRS of the BTA lesion during the BTA period showed elevated lactate levels in 5 children in the severe group and 1 child in the mild group. MRI performed during the chronic phase revealed severe brain atrophy in all patients in the severe group., Conclusions: Higher creatinine and LDH levels and lower platelet counts in the acute phase correlated with poor prognosis. Increased lactate levels in the BTA lesion during the BTA period on MRS may predict severe physical and mental disability., (Copyright © 2014 The Japanese Society of Child Neurology. Published by Elsevier B.V. All rights reserved.)
- Published
- 2015
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208. Overestimation of the number of elements in a three-dimensional stimulus.
- Author
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Aida S, Kusano T, Shimono K, and Tam WJ
- Subjects
- Adult, Female, Humans, Judgment, Male, Young Adult, Depth Perception physiology, Imaging, Three-Dimensional, Vision, Binocular physiology
- Abstract
Observers' numerosity judgments in binocular stereopsis were examined in four experiments, using random-dot stereograms (RDSs) that depicted a two-dimensional (2-D) stimulus side-by-side with a three-dimensional (3-D) stimulus. When the RDSs were correctly fused, a single surface and two (or three) transparent surfaces were observed for the 2-D and 3-D stimuli, respectively. Observers completed a numerosity discrimination task, where they judged which of the two stimuli had a greater number of dot elements. Results showed that (a) the 3-D stimulus was judged to contain more elements than the 2-D stimulus, even when both had the same number of elements, (b) the amount of overestimation increased as a function of the number of elements and the binocular disparity between the front and back surfaces of the 3-D stimulus, (c) the ratio of the physical number of elements in the front surface to that in the back surface of the 3-D stimulus had no effect on the magnitude of overestimation, and (d) when the number of elements for the two surfaces were judged separately, the ratio had more effect on the judged number of elements in the back surface than in the front surface. These results indicate that the extent of overestimation in the numerosity judgment of a set of elements in a stimulus depends on the number of depth layers in which the elements are embedded.
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- 2015
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209. Magnitude of perceived depth of multiple stereo transparent surfaces.
- Author
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Aida S, Shimono K, and Tam WJ
- Subjects
- Adult, Analysis of Variance, Discrimination, Psychological physiology, Eye Movements physiology, Humans, Observer Variation, Perceptual Masking physiology, Photic Stimulation methods, Vision Disparity physiology, Vision, Binocular physiology, Young Adult, Depth Perception physiology
- Abstract
According to the geometric relational expression of binocular stereopsis, for a given viewing distance the magnitude of the perceived depth of objects would be the same, as long as the disparity magnitudes were the same. However, we found that this is not necessarily the case for random-dot stereograms that depict parallel, overlapping, transparent stereoscopic surfaces (POTS). The data from five experiments indicated that (1) the magnitude of perceived depth between the two outer surfaces of a three- or a four-POTS configuration can be smaller than that for an identical pair of stereo surfaces of a two-POTS configuration for the range of disparities that we used (5.2-19.4 arcmin); (2) this phenomenon can be observed irrespective of the total dot density of a POTS configuration, at least for the range that we used (1.1-3.3 dots/deg(2)); and (3) the magnitude of perceived depth between the two outer surfaces of a POTS configuration can be reduced as the total number of stereo surfaces is increased, up to four surfaces. We explained these results in terms of a higher-order process or processes, with an output representing perceived depth magnitude, which is weakened when the number of its surfaces is increased.
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- 2015
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210. Electrophysiological characterization of human Na⁺/taurocholate cotransporting polypeptide (hNTCP) heterologously expressed in Xenopus laevis oocytes.
- Author
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Masuda M, Ichikawa Y, Shimono K, Shimizu M, Tanaka Y, Nara T, and Miyauchi S
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- Animals, Biological Transport, Cells, Cultured, Electrophysiological Phenomena, Gene Library, Humans, Liver drug effects, Liver metabolism, Oocytes, Rats, Rats, Sprague-Dawley, Xenopus laevis, Hepatocytes metabolism, Organic Anion Transporters, Sodium-Dependent metabolism, Sodium chemistry, Symporters metabolism, Taurocholic Acid chemistry
- Abstract
The Na(+)/taurocholate cotransporting polypeptide (NTCP) plays a major role in Na(+)-dependent bile acid uptake into hepatocytes. The purpose of the present study was to establish the heterologous expression of human NTCP (hNTCP) in Xenopus laevis oocytes and to elucidate whether the transport of bile acid via hNTCP is electrogenic using electrophysiological techniques. First, we evaluated the uptake of taurocholate (TCA) by hNTCP heterologously expressed in Xenopus oocytes utilizing [(3)H]-labeled TCA. The uptake of 1.2 μM TCA by cRNA-injected oocytes increased more than 100-fold compared to H2O-injected oocytes, indicating that hNTCP is robustly expressed in the oocytes. hNTCP-mediated transport of TCA is saturable with a Michaelis constant of 10.5 ± 2.9 μM. The Na(+)-activation kinetics describing the relationship between the concentration of Na(+) and the magnitude of the TCA uptake rate by hNTCP were sigmoidal with a Hill coefficient of 2.3 ± 0.4, indicating the involvement of more than one Na(+) in the transport process. Ntcp in primary cultured hepatocytes from rats exhibited similar Na(+)-activation kinetics of TCA uptake rate with a Hill coefficient of 1.9 ± 0.1, suggesting that hNTCP could be expressed properly in the oocytes and exhibit the electrogenic property of Na(+)-coupled TCA transport. The transport of TCA via hNTCP was subsequently determined in the oocytes by the inward currents induced via TCA uptake under voltage (-50 mV). Two hundred micromolar TCA induced significant inward currents that were entirely abolished by the substitution of Na(+) with N-methyl-d-glucamine (NMDG) in the perfusate, indicating that the TCA-induced currents were obligatorily dependent on the presence of Na(+). The TCA-induced currents were saturable, and the substrate concentration needed for half-maximal induction of the current was consistent with the Michaelis constant. Transportable substrates, such as rosuvastatin and fluvastatin, also induced currents. These results in the hNTCP heterologously expressed in Xenopus oocytes directly demonstrated that hNTCP is an electrogenic Na(+)-dependent transporter., (Copyright © 2014 Elsevier Inc. All rights reserved.)
- Published
- 2014
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211. Abnormal corpus callosum connectivity, socio-communicative deficits, and motor deficits in children with autism spectrum disorder: a diffusion tensor imaging study.
- Author
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Hanaie R, Mohri I, Kagitani-Shimono K, Tachibana M, Matsuzaki J, Watanabe Y, Fujita N, and Taniike M
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- Adolescent, Child, Child Development Disorders, Pervasive psychology, Child, Preschool, Diffusion Tensor Imaging, Female, Humans, Male, Child Development Disorders, Pervasive physiopathology, Communication, Corpus Callosum physiopathology, Motor Activity
- Abstract
In addition to social and communicative deficits, many studies have reported motor deficits in autism spectrum disorder (ASD). This study investigated the macro and microstructural properties of the corpus callosum (CC) of 18 children with ASD and 12 typically developing controls using diffusion tensor imaging tractography. We aimed to explore whether abnormalities of the CC were related to motor deficits, as well as social and communication deficits in children with ASD. The ASD group displayed abnormal macro and microstructure of the total CC and its subdivisions and its structural properties were related to socio-communicative deficits, but not to motor deficits in ASD. These findings advance our understanding of the contributions of the CC to ASD symptoms.
- Published
- 2014
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212. Progressively increased M50 responses to repeated sounds in autism spectrum disorder with auditory hypersensitivity: a magnetoencephalographic study.
- Author
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Matsuzaki J, Kagitani-Shimono K, Sugata H, Hirata M, Hanaie R, Nagatani F, Tachibana M, Tominaga K, Mohri I, and Taniike M
- Subjects
- Acoustic Stimulation methods, Analysis of Variance, Child, Child Development Disorders, Pervasive complications, Humans, Hyperacusis etiology, Magnetoencephalography methods, Male, Auditory Cortex physiopathology, Child Development Disorders, Pervasive physiopathology, Evoked Potentials, Auditory physiology, Hyperacusis physiopathology
- Abstract
The aim of this study was to investigate the differential time-course responses of the auditory cortex to repeated auditory stimuli in children with autism spectrum disorder (ASD) showing auditory hypersensitivity. Auditory-evoked field values were obtained from 21 boys with ASD (12 with and 9 without auditory hypersensitivity) and 15 age-matched typically developing controls. M50 dipole moments were significantly increased during the time-course study only in the ASD with auditory hypersensitivity compared with those for the other two groups. The boys having ASD with auditory hypersensitivity also showed more prolonged response duration than those in the other two groups. The response duration was significantly related to the severity of auditory hypersensitivity. We propose that auditory hypersensitivity is associated with decreased inhibitory processing, possibly resulting from an abnormal sensory gating system or dysfunction of inhibitory interneurons.
- Published
- 2014
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213. Psychometric properties and population-based score distributions of the Japanese Sleep Questionnaire for Preschoolers.
- Author
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Shimizu S, Kato-Nishimura K, Mohri I, Kagitani-Shimono K, Tachibana M, Ohno Y, and Taniike M
- Subjects
- Child, Preschool, Cross-Sectional Studies, Female, Health Surveys, Humans, Japan, Male, Mass Screening, Reproducibility of Results, Risk Factors, Sleep Wake Disorders epidemiology, Cross-Cultural Comparison, Psychometrics statistics & numerical data, Sleep Wake Disorders diagnosis, Surveys and Questionnaires
- Abstract
Objective: We aimed to present psychometric properties and describe the score distributions of the Japanese Sleep Questionnaire for Preschoolers (JSQ-P), a guardian-reported survey questionnaire for assessing sleep disturbances and problematic sleep habits among preschool children., Methods: Guardians of 2998 toddlers in three communities and guardians of 102 patients diagnosed with sleep disorders in two clinics completed the JSQ-P., Results: Exploratory factor analysis (EFA) revealed the 10 domains of the JSQ-P to be similar to our previous small-scale study and confirmed the robustness of the JSQ-P. The JSQ-P showed acceptable internal consistency; α coefficients ranged from 0.622 (insufficient sleep) to 0.912 (restless legs syndrome [RLS], motor) for the community sample and 0.696 (insufficient sleep) to 0.959 (RLS, motor) for the clinical sample. The score differentiations between the community and clinical samples associated with RLS, obstructive sleep apnea syndrome (OSAS), morning symptoms, parasomnias, excessive daytime sleepiness, and daytime behaviors were demonstrated in our study. The distributions of percentile T scores for each subscale and age and gender differentiation of scores also were evaluated., Conclusions: We confirmed that the JSQ-P is a valid and reliable instrument to evaluate Japanese sleep habits using a large population-based sample. The JSQ-P may be useful in both clinical and academic settings., (Copyright © 2013 The Authors. Published by Elsevier B.V. All rights reserved.)
- Published
- 2014
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214. An evolutionarily conserved protein CHORD regulates scaling of dendritic arbors with body size.
- Author
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Shimono K, Fujishima K, Nomura T, Ohashi M, Usui T, Kengaku M, Toyoda A, and Uemura T
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- Amino Acid Sequence, Animals, Body Size, Carrier Proteins genetics, Cell Size, Dendrites ultrastructure, Drosophila Proteins genetics, Drosophila melanogaster anatomy & histology, Drosophila melanogaster growth & development, Drosophila melanogaster metabolism, Evolution, Molecular, Female, Gene Expression Regulation, Developmental, Insulin genetics, Insulin metabolism, Mechanistic Target of Rapamycin Complex 2, Molecular Chaperones genetics, Molecular Sequence Data, Multiprotein Complexes genetics, Multiprotein Complexes metabolism, Sensory Receptor Cells ultrastructure, Signal Transduction, TOR Serine-Threonine Kinases genetics, TOR Serine-Threonine Kinases metabolism, Transcription Factors genetics, Transcription Factors metabolism, Carrier Proteins metabolism, Conserved Sequence, Dendrites metabolism, Drosophila Proteins metabolism, Drosophila melanogaster genetics, Molecular Chaperones metabolism, Sensory Receptor Cells metabolism
- Abstract
Most organs scale proportionally with body size through regulation of individual cell size and/or cell number. Here we addressed how postmitotic and morphologically complex cells such as neurons scale with the body size by using the dendritic arbor of one Drosophila sensory neuron as an assay system. In small adults eclosed under a limited-nutrition condition, the wild-type neuron preserved the branching complexity of the arbor, but scaled down the entire arbor, making a "miniature". In contrast, mutant neurons for the Insulin/IGF signaling (IIS) or TORC1 pathway exhibited "undergrowth", which was characterized by decreases in both the branching complexity and the arbor size, despite a normal diet. These contrasting phenotypes hinted that a novel regulatory mechanism contributes to the dendritic scaling in wild-type neurons. Indeed, we isolated a mutation in the gene CHORD/morgana that uncoupled the neuron size and the body size: CHORD mutant neurons generated miniature dendritic arbors regardless of the body size. CHORD encodes an evolutionarily conserved co-chaperone of HSP90. Our results support the notion that dendritic growth and branching are controlled by partly separate mechanisms. The IIS/TORC1 pathways control both growth and branching to avert underdevelopment, whereas CHORD together with TORC2 realizes proportional scaling of the entire arbor.
- Published
- 2014
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215. Common variant of leucine-rich repeat-containing 16A (LRRC16A) gene is associated with gout susceptibility.
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Sakiyama M, Matsuo H, Shimizu S, Chiba T, Nakayama A, Takada Y, Nakamura T, Takada T, Morita E, Naito M, Wakai K, Inoue H, Tatsukawa S, Sato J, Shimono K, Makino T, Satoh T, Suzuki H, Kanai Y, Hamajima N, Sakurai Y, Ichida K, Shimizu T, and Shinomiya N
- Subjects
- Actin Cytoskeleton metabolism, Actins metabolism, Genotype, Humans, Male, Microfilament Proteins, Organic Anion Transporters genetics, Organic Anion Transporters physiology, Polymerization, Uric Acid blood, Uric Acid metabolism, Carrier Proteins genetics, Genetic Predisposition to Disease genetics, Genetic Variation, Gout genetics
- Abstract
Gout is a common disease resulting from hyperuricemia which causes acute arthritis. Recently, genome-wide association studies revealed an association between serum uric acid levels and a common variant of leucine-rich repeat-containing 16A (LRRC16A) gene. However, it remains to be clarified whether LRRC16A contributes to the susceptibility to gout. In this study, we investigated the relationship between rs742132 in LRRC16A and gout. A total of 545 Japanese male gout cases and 1,115 male individuals as a control group were genotyped. rs742132 A/A genotype significantly increased the risk of gout, conferring an odds ratio of 1.30 (95 % CI 1.05-1.60; p = 0.015). LRRC16A encodes a protein called capping protein ARP2/3 and myosin-I linker (CARMIL), which serves as an inhibitor of the actin capping protein (CP). CP is an essential element of the actin cytoskeleton, which binds to the barbed end of the actin filament and regulates its polymerization. In the apical membrane of proximal tubular cells in the human kidney, the urate-transporting multimolecular complex (urate transportsome) is proposed to consist of several urate transporters and scaffolding proteins, which interact with the actin cytoskeleton. Thus, if there is a CARMIL dysfunction and regulatory disability in actin polymerization, urate transportsome may be unable to operate appropriately. We have shown for the first time that CARMIL/LRRC16A was associated with gout, which could be due to urate transportsome failure.
- Published
- 2014
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216. Sensory-neuron subtype-specific transcriptional programs controlling dendrite morphogenesis: genome-wide analysis of Abrupt and Knot/Collier.
- Author
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Hattori Y, Usui T, Satoh D, Moriyama S, Shimono K, Itoh T, Shirahige K, and Uemura T
- Subjects
- Animals, Chromatin genetics, Dendrites physiology, Drosophila Proteins metabolism, Drosophila melanogaster cytology, Drosophila melanogaster growth & development, Gene Expression Regulation, Developmental, Genome-Wide Association Study, Larva cytology, Larva physiology, Nuclear Proteins metabolism, Sensory Receptor Cells ultrastructure, Tenascin genetics, Tenascin metabolism, Transcription Factors metabolism, Transcriptome, Drosophila Proteins genetics, Drosophila melanogaster physiology, Morphogenesis genetics, Nuclear Proteins genetics, Sensory Receptor Cells physiology, Transcription Factors genetics, Transcription, Genetic physiology
- Abstract
The transcription factors Abrupt (Ab) and Knot (Kn) act as selectors of distinct dendritic arbor morphologies in two classes of Drosophila sensory neurons, termed class I and class IV, respectively. We performed binding-site mapping and transcriptional profiling of these isolated neurons. Their profiles were similarly enriched in cell-type-specific enhancers of genes implicated in neural development. We identified a total of 429 target genes, of which 56 were common to Ab and Kn; these targets included genes necessary to shape dendritic arbors in either or both of the two sensory subtypes. Furthermore, a common target gene, encoding the cell adhesion molecule Ten-m, was expressed more strongly in class I than class IV, and this differential was critical to the class-selective directional control of dendritic branch sprouting or extension. Our analyses illustrate how differentiating neurons employ distinct and shared repertoires of gene expression to produce class-selective morphological traits., (Copyright © 2013 Elsevier Inc. All rights reserved.)
- Published
- 2013
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217. Altered microstructural connectivity of the superior cerebellar peduncle is related to motor dysfunction in children with autistic spectrum disorders.
- Author
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Hanaie R, Mohri I, Kagitani-Shimono K, Tachibana M, Azuma J, Matsuzaki J, Watanabe Y, Fujita N, and Taniike M
- Subjects
- Adolescent, Anisotropy, Autistic Disorder physiopathology, Cerebellum physiopathology, Child, Child, Preschool, Diffusion Tensor Imaging methods, Female, Humans, Male, Neural Pathways pathology, Neural Pathways physiopathology, Autistic Disorder pathology, Cerebellum pathology, Motor Activity physiology
- Abstract
Many studies have reported motor impairments in autistic spectrum disorders (ASD). However, the brain mechanism underlying motor impairment in ASD remains unclear. Recent neuroimaging studies have suggested that underconnectivity between the cerebellum and other brain regions contributes to the features of ASD. In this study, we investigated the microstructural integrity of the cerebellar pathways, including the superior, middle, and inferior cerebellar peduncles, of children with and without ASD by using diffusion tensor imaging (DTI) tractography to determine whether the microstructural integrity of the cerebellar pathways is related to motor function in children with ASD. Thirteen children with ASD and 11 age-, gender-, handedness-, and IQ-matched typically developing (TD) controls were enrolled in this study. DTI outcome measurements, such as fractional anisotropy (FA), axial diffusivity (AD), and radial diffusivity (RD), for the cerebellar pathways were calculated. The Movement Assessment Battery for Children 2 (M-ABC 2) was used for assessing motor functions. There were no significant differences between the two groups in RD. However, compared to the TD subjects, patients with ASD had a significantly lower FA in the right superior cerebellar peduncle and lower AD in the left superior cerebellar peduncle, in addition to a significantly lower score in ball skills and the total test score of M-ABC 2. There was a significant positive correlation between the total test score of M-ABC 2 and FA in the right superior cerebellar peduncle in the ASD group. These findings suggest that the altered microstructural integrity of the superior cerebellar peduncle may be related to motor impairment in ASD.
- Published
- 2013
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218. Oral mexiletine for lidocaine-responsive neonatal epilepsy.
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Nakazawa M, Okumura A, Niijima S, Yamashita S, Shimono K, Hirose S, and Shimizu T
- Subjects
- Administration, Oral, Electroencephalography, Epilepsy physiopathology, Humans, Infant, Newborn, Infusions, Intravenous, Lidocaine administration & dosage, Male, Anti-Arrhythmia Agents administration & dosage, Epilepsy drug therapy, Mexiletine administration & dosage
- Abstract
We report a patient with lidocaine-responsive neonatal epilepsy treated successfully with oral mexiletine. The patient was a male neonate who had seizures since 2days of age. While his seizures were refractory to phenobarbital, lamotrigine, vitamin B6, and midazolam, they were controlled by continuous lidocaine infusion. Oral mexiletine at serum levels of 0.2-0.4μg/ml was used successfully for long-term treatment of his seizures. No delay in psychomotor development was observed at the last follow-up at 20months of age. No mutation was identified in any of four genes: SCN1A, SCN1B, KCNQ2, and KCNQ3. Our patient demonstrates that oral mexiletine can be useful for long-term treatment of patients with lidocaine-responsive epilepsy., (Copyright © 2012 The Japanese Society of Child Neurology. Published by Elsevier B.V. All rights reserved.)
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- 2013
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219. Effects of lipid emulsion and multivitamins on the growth of microorganisms in peripheral parenteral nutrition solutions.
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Kuwahara T, Kaneda S, Shimono K, and Inoue Y
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- Bacillus cereus drug effects, Emulsions chemistry, Humans, Serratia marcescens drug effects, Staphylococcus aureus drug effects, Emulsions pharmacology, Lipids chemistry, Parenteral Nutrition Solutions pharmacology, Parenteral Nutrition, Total adverse effects
- Abstract
Background: Blood stream infections caused by Bacillus cereus or Serratia marcescens in patients receiving peripheral parenteral nutrition (PPN) have occasionally been reported in Japan, but these microorganisms are not major causes of blood stream infections in patients receiving total parenteral nutrition via a central venous catheter. In Japan, commercially available PPN solutions contain amino acids, glucose, and electrolytes, but not contain lipid emulsion (LE) and multivitamins (MV). In this study, the effects of LE and MV on the growth of microorganisms such as Bacillus cereus, Serratia marcescens, Staphylococcus aureus, and Candida albicans in PPN solutions were investigated., Methods: A commercial 3% amino acid and 7.5% glucose solution with electrolytes (AF) was used as the base solution to prepare test solutions (LAF, AFV, and LAFV) containing LE, MV, or both. Specifically, 20% LE was added to AF in a ratio of 1:9 to prepare LAF. MV was added to AF and LAF to prepare AFV and LAFV, respectively. A specified number of each microorganism was added to each 100 mL of AF, LAF, AFV, and LAFV in sterile plastic flasks, and all flasks were allowed to stand at room temperature. The number of colony forming units per mL of each microorganism was counted at 0, 24, and 48 hours after the addition of each microorganism., Results: Both Bacillus cereus and Serratia marcescens increased rapidly in AF as well as in LAF, AFV, and LAFV. Staphylococcus aureus did not increased in AF, but increased slightly in LAF and increased rapidly in AFV and LAFV. Candida albicans increased slightly in AF and increased rapidly in LAF, AFV, and LAFV., Conclusions: The results suggest the followings: if microbial contamination occurs, 1) Bacillus cereus and Serratia marcescens can grow rapidly in PPN solutions consisting of amino acids, glucose and electrolytes; 2) Staphylococcus aureus cannot grow without LE and MV, but can grow rapidly with MV; 3) Candida albicans can grow slowly without LE and MV, and the addition of LE or MV accelerates its growth.
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- 2013
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220. Long-term administration of intranasal oxytocin is a safe and promising therapy for early adolescent boys with autism spectrum disorders.
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Tachibana M, Kagitani-Shimono K, Mohri I, Yamamoto T, Sanefuji W, Nakamura A, Oishi M, Kimura T, Onaka T, Ozono K, and Taniike M
- Subjects
- Administration, Intranasal, Adolescent, Child, Child Development Disorders, Pervasive physiopathology, Dose-Response Relationship, Drug, Humans, Male, Medication Adherence, Oxytocin administration & dosage, Oxytocin adverse effects, Time Factors, Treatment Outcome, Child Development Disorders, Pervasive drug therapy, Oxytocin therapeutic use
- Abstract
Objective: Oxytocin (OT) has been a candidate for the treatment of autism spectrum disorders (ASD), and the impact of intranasally delivered OT on ASD has been investigated. However, most previous studies were conducted by single-dose administration to adults; and, therefore, the long-term effect of nasal OT on ASD patients and its effect on children remain to be clarified., Methods: We conducted a singled-armed, open-label study in which OT was administered intranasally over the long term to eight male youth with ASD (10-14 years of age; intelligence quotient [IQ] 20-101). The OT administration was performed in a stepwise increased dosage manner every 2 months (8, 16, 24 IU/dose). A placebo period (1-2 weeks) was inserted before each step. The outcome measures were autism diagnostic observation schedule--generic (ADOS-G), child behavior checklist (CBCL), and the aberrant behavior checklist (ABC). In addition, side effects were monitored by measuring blood pressure and examining urine and blood samples., Results: Six of the eight participants showed improved scores on the communication and social interaction domains of the ADOS-G. However, regarding the T-scores of the CBCL and the scores of the ABC, we could not find any statistically significant improvement, although several subcategories showed a mild tendency for improvement. Caregivers of five of the eight participants reported certain positive effects of the OT therapy, especially on the quality of reciprocal communication. All participants showed excellent compliance and no side effects., Conclusions: Although our results on the efficacy of long-term nasal OT therapy still remain controversial, to the best of our knowledge, this is the first report documenting the safety of long-term nasal OT therapy for children with ASD. Even though our data are too preliminary to draw any definite conclusions about efficacy, they do suggest this therapy to be safe, promising, and worthy of a large-scale, double-blind placebo-controlled study.
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- 2013
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221. Thermodynamic parameters of anion binding to halorhodopsin from Natronomonas pharaonis by isothermal titration calorimetry.
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Hayashi S, Tamogami J, Kikukawa T, Okamoto H, Shimono K, Miyauchi S, Demura M, Nara T, and Kamo N
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- Anions chemistry, Binding Sites, Calorimetry, Halorhodopsins chemistry, Halorhodopsins genetics, Mutant Proteins chemistry, Mutant Proteins genetics, Mutation genetics, Schiff Bases, Thermodynamics, Anions metabolism, Halorhodopsins metabolism, Mutant Proteins metabolism, Natronobacterium metabolism
- Abstract
Halorhodopsin (HR), an inwardly directed, light-driven anion pump, is a membrane protein in halobacterial cells that contains the chromophore retinal, which binds to a specific lysine residue forming the Schiff base. An anion binds to the extracellular binding site near the Schiff base, and illumination makes this anion go to the intracellular channel, followed by its release from the protein and re-uptake from the opposite side. The thermodynamic properties of the anion binding in the dark, which have not been previously estimated, are determined using isothermal titration calorimetry (ITC). For Cl(-) as a typical substrate of HR from Natronomonas pharaonis, ΔG=-RT ln(1/K(d))=-15.9 kJ/mol, ΔH=-21.3 kJ/mol and TΔS=-5.4 kJ/mol at 35 °C, where K(d) represents the dissociation constant. In the dark, K(d) values have been determined by the usual spectroscopic methods and are in agreement with the values estimated by ITC here. Opsin showed no Cl(-) binding ability, and the deprotonated Schiff base showed weak binding affinity, suggesting the importance of the positively charged protonated Schiff base for the anion binding., (Copyright © 2013 Elsevier B.V. All rights reserved.)
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- 2013
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222. A case of cerebral hypomyelination with spondylo-epi-metaphyseal dysplasia.
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Kimura-Ohba S, Kagitani-Shimono K, Hashimoto N, Nabatame S, Okinaga T, Murakami A, Miyake N, Matsumoto N, Osaka H, Hojo K, Tomita R, Taniike M, and Ozono K
- Subjects
- Amino Acid Transport Systems, Acidic deficiency, Amino Acid Transport Systems, Acidic genetics, Antiporters deficiency, Antiporters genetics, Brain Stem abnormalities, Brain Stem pathology, Child, Child, Preschool, DNA Copy Number Variations, Discoidin Domain Receptors, Hereditary Central Nervous System Demyelinating Diseases diagnosis, Humans, Image Processing, Computer-Assisted, Infant, Magnetic Resonance Imaging, Male, Microarray Analysis, Mitochondrial Diseases diagnosis, Mutation, Myelin Proteolipid Protein genetics, Osteochondrodysplasias diagnosis, Pelizaeus-Merzbacher Disease diagnosis, Pelizaeus-Merzbacher Disease genetics, Psychomotor Disorders diagnosis, Receptor Protein-Tyrosine Kinases genetics, Receptors, Mitogen genetics, Hereditary Central Nervous System Demyelinating Diseases genetics, Mitochondrial Diseases genetics, Osteochondrodysplasias genetics, Psychomotor Disorders genetics
- Abstract
We reported on a male patient with rare leukoencephalopathy and skeletal abnormalities. The condition was first noticed as a developmental delay, nystagmus and ataxia at 1 year of age. At 4 years of age, he was diagnosed as hypomyelination with skeletal abnormalities from clinical features, brain magnetic resonance imaging (MRI) and skeletal X-rays. His brain MRI revealed diffuse hypomyelination. These findings suggested the classical type of Pelizaeus-Merzbacher disease (PMD) caused by proteolipid protein (PLP)-1 gene or Pelizaeus-Merzbacher-like disease (PMLD). However, we found neither mutation nor duplication of PLP-1. The patient had severe growth retardation and general skeletal dysplasia compatible with spondylo-epi-metaphyseal dysplasia; however the mutation of discoidin domain receptor (DDR) 2 gene was absent. The co-morbidity of hypomyelination with skeletal abnormalities is rare. We performed array CGH and no causal copy number variation was recognized. Alternatively, this condition may have been caused by a mutation of the gene encoding a molecule that functions in both cerebral myelination and skeletal development., (Copyright © 2012 Wiley Periodicals, Inc.)
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- 2013
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223. [Cyclophosphamide pulse therapy effective for childhood-onset refractory multiple sclerosis: a case report].
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Ikeda T, Kagitani-Shimono K, Iwatani Y, Kitai Y, Tachibana M, Tominaga K, Okinaga T, Nagai T, and Ozono K
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- Adolescent, Drug Therapy, Combination methods, Female, Humans, Interferon beta-1a, Multiple Sclerosis, Relapsing-Remitting diagnosis, Secondary Prevention, Treatment Outcome, Cyclophosphamide therapeutic use, Immunosuppressive Agents therapeutic use, Interferon-beta therapeutic use, Multiple Sclerosis, Relapsing-Remitting drug therapy
- Abstract
We report a case of a 15-year-old girl with relapsing-remitting multiple sclerosis (MS) who received cyclophosphamide pulse therapy. At the age of 5 years, she displayed symptoms such as headache and unconsciousness after varicella infection as the first episode of MS. She had been treated with methylprednisolone pulse therapy, intravenous immunoglobulin, interferon-beta1b, and azathioprine. However, she had relapsed 12 times by the age of 15 years. At this time, she showed weakness and severe paralysis of her left leg, and even 1 month after methylprednisolone pulse therapy, she still had gait impairment and showed gadolinium-enhanced lesion on brain magnetic resonance imaging. We then started cyclophosphamide pulse therapy (600 mg/m2) once a month for 12 months combined with interferon-beta1a. She had no serious side effects and she could walk again after 4 months on cyclophosphamide treatment. She has been free from relapse for 2 years and 8 months until the present time. Although only a few studies have indicated the efficacy of cyclophosphamide pulse therapy for childhood MS, we consider careful use of cyclophosphamide could be one of the options for refractory childhood MS.
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- 2013
224. Which is the most appropriate disconnection surgery for refractory epilepsy in childhood?
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Kishima H, Oshino S, Tani N, Maruo Y, Morris S, Khoo HM, Yanagisawa T, Shimono K, Okinaga T, Hirata M, Kato A, and Yoshimine T
- Subjects
- Adolescent, Anticonvulsants pharmacology, Anticonvulsants therapeutic use, Brain Damage, Chronic etiology, Brain Damage, Chronic prevention & control, Cerebral Cortex surgery, Child, Child, Preschool, Corpus Callosum surgery, Drug Resistance, Epilepsy drug therapy, Female, Hemispherectomy adverse effects, Humans, Infant, Male, Malformations of Cortical Development complications, Malformations of Cortical Development surgery, Neurosurgical Procedures adverse effects, Postoperative Complications etiology, Postoperative Complications prevention & control, Retrospective Studies, Treatment Outcome, Epilepsy surgery, Neurosurgical Procedures methods
- Abstract
Children with unilobar or multilobar pathology issuing in refractory epilepsy are potential candidates for surgical treatment. Extensive surgery results in good seizure control, but it also increases the risk of neurological deficits as well as motor and mental problems. We reviewed the cases of 19 children with refractory epilepsy treated surgically at Osaka University Hospital. Four of the 19 patients underwent temporal disconnection, 2 underwent occipital lobectomy, 4 underwent temporoparietooccipital disconnection, 6 underwent functional hemispherotomy, and 3 underwent corpus callosotomy. A good surgical outcome, i.e., Engel's class I or II, was achieved in 12 (63%) of the 19 patients. Excellent surgical outcomes and satisfactory motor and mental development were achieved in 4 patients who underwent temporoparietooccipital disconnection. The outcomes of functional hemispherectomy were also satisfactory. The outcomes of temporal disconnection and corpus callosotomy were poor in comparison to outcomes of the other procedures. We believe that better surgical outcomes would have been achieved with temporoparietooccipital disconnection in some cases treated by temporal disconnection or occipital resection. Adequate extensive surgical procedures should be considered for refractory childhood epilepsy arising from unilobar or multilobar pathology.
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- 2013
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225. Photoinduced proton release in proteorhodopsin at low pH: the possibility of a decrease in the pK(a) of Asp227.
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Tamogami J, Kikukawa T, Nara T, Shimono K, Demura M, and Kamo N
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- Base Sequence, DNA Primers, Photochemical Processes, Polymerase Chain Reaction, Rhodopsins, Microbial, Spectrum Analysis methods, Hydrogen-Ion Concentration, Protons, Rhodopsin chemistry
- Abstract
Proteorhodopsin (PR) is one of the microbial rhodopsins that are found in marine eubacteria and likely functions as an outward light-driven proton pump. Previously, we [Tamogami, J., et al. (2009) Photochem. Photobiol.85, 578-589] reported the occurrence of a photoinduced proton transfer in PR between pH 5 and 10 using a transparent ITO (indium-tin oxide) or SnO(2) electrode that works as a time-resolving pH electrode. In the study presented here, the proton transfer at low pH (<4) was investigated. Under these conditions, Asp97, the primary counterion to the protonated Schiff base, is protonated. We observed a first proton release that was followed by an uptake; during this process, however, the M intermediate did not form. Through the use of experiments with several PR mutants, we found that Asp227 played an essential role in proton release. This residue corresponds to the Asp212 residue of bacteriorhodopsin, the so-called secondary Schiff base counterion. We estimated the pK(a) of this residue in both the dark and the proton-releasing photoproduct to be ~3.0 and ~2.3, respectively. The pK(a) value of Asp227 in the dark was also estimated spectroscopically and was approximately equal to that determined with the ITO experiments, which may imply the possibility of the release of a proton from Asp227. In the absence of Cl(-), we observed the proton release in D227N and found that Asp97, the primary counterion, played a key role. It is inferred that the negative charge is required to stabilize the photoproducts through the deprotonation of Asp227 (first choice), the binding of Cl(-) (second choice), or the deprotonation of Asp97. The photoinduced proton release (possibly by the decrease in the pK(a) of the secondary counterion) in acidic media was also observed in other microbial rhodopsins with the exception of the Anabaena sensory rhodopsin, which lacks the dissociable residue at the position of Asp212 of BR or Asp227 of PR and halorhodopsin. The implication of this pK(a) decrease is discussed.
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- 2012
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226. Ictal high-frequency oscillations on scalp EEG recordings in symptomatic West syndrome.
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Iwatani Y, Kagitani-Shimono K, Tominaga K, Okinaga T, Kishima H, Kato A, Nagai T, and Ozono K
- Subjects
- Age of Onset, Aicardi Syndrome diagnosis, Aicardi Syndrome physiopathology, Aicardi Syndrome surgery, Cerebral Cortex diagnostic imaging, Cerebral Cortex pathology, Cerebral Cortex physiopathology, Female, Humans, Infant, Magnetic Resonance Imaging, Male, Malformations of Cortical Development diagnosis, Malformations of Cortical Development physiopathology, Malformations of Cortical Development surgery, Positron-Emission Tomography, Retrospective Studies, Spasms, Infantile surgery, Tomography, Emission-Computed, Single-Photon, Brain Mapping methods, Electroencephalography methods, Preoperative Care methods, Spasms, Infantile diagnosis, Spasms, Infantile physiopathology
- Abstract
Objectives: High-frequency oscillations (HFOs) on intracranial electroencephalography (EEG) recordings have been reported to be useful to identify the epileptogenic zone in intractable epilepsy. We investigated whether the ictal HFOs on scalp EEG seen during spasms contributed to identification of the epileptogenic zone in symptomatic West syndrome (S-WS)., Methods: In S-WS, ictal scalp EEGs were recorded during a series of spasms. The HFOs associated with spasms were visualized in the temporally expanded EEG traces and subjected to time-frequency analysis. The results on the distribution of HFOs were compared with that of cortical lesions indicated by neuroimaging., Results: In the 4 children examined, HFOs at 80-150 Hz preceded the clinical onsets of spasms. The maximum augmentation of these HFOs was larger than that of HFOs at 20-70 Hz. The regions of the maximum augmentation of HFOs at 80-150 Hz were identical to the lesions detected by neuroimaging. Two patients who underwent dissection of the area including the area with HFOs resulted in Engel class I., Conclusion: Ictal HFOs of spasms on scalp EEG showed a strong association with neuroimaging abnormalities presumed to be the epileptogenic zone in S-WS. Ictal HFOs can thus be a useful marker for exploring lesions for epilepsy surgery., (Copyright © 2012 Elsevier B.V. All rights reserved.)
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- 2012
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227. Apparent depth of pictures reflected by a mirror: the plastic effect.
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Higashiyama A and Shimono K
- Subjects
- Female, Humans, Judgment, Male, Vision, Binocular, Vision, Monocular, Young Adult, Depth Perception, Discrimination, Psychological, Optical Illusions, Orientation, Pattern Recognition, Visual
- Abstract
We investigated the plastic effect in picture perception, in which the apparent depth of a picture is increased when it is reflected by a mirror. The plastic effect was well known in the mid-18th century, but very few studies have elucidated its nature. In Experiment 1, we examined how often the plastic effect occurs in different ocular conditions. A group of 22 observers compared directly observed pictures and their mirror-reflected images in each of free-binocular, free-monocular, and restrictive-monocular conditions. When the observers were forced to choose the picture that appeared greater in depth, 73 % of them chose the reflected pictures, regardless of oculomotor condition. In Experiment 2, we examined how often the plastic effect is detected as a function of observation time. When 22 observers compared a directly watched movie and its mirror-reflected movie for 5 min, the number of observers who judged the reflected movie to be greater in depth was about 55 % at the onset of the trial but was 86 % at the end. In Experiment 3, we examined transfer of the plastic effect. Ten observers judged the change in apparent depth of directly observed pictures after prolonged exposure to the same reflected or actual pictures. Transfer was confirmed and was greater for pictures that represented greater depth (r = .88). We suggested that the plastic effect is mainly induced by the double apparent locations of a reflected picture. From the long incubation time and the transfer to real pictures, we also suggested that it involves perceptual learning regarding visual skill.
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- 2012
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228. Long-term developmental outcome in patients with West syndrome after epilepsy surgery.
- Author
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Iwatani Y, Kagitani-Shimono K, Tominaga K, Okinaga T, Mohri I, Kishima H, Kato A, Sanefuji W, Yamamoto T, Tatsumi A, Murata E, Taniike M, Nagai T, and Ozono K
- Subjects
- Brain diagnostic imaging, Brain pathology, Electroencephalography, Epilepsy surgery, Fluorodeoxyglucose F18, Humans, Infant, Infant, Newborn, Longitudinal Studies, Magnetic Resonance Imaging, Positron-Emission Tomography, Retrospective Studies, Spasms, Infantile diagnosis, Tomography, Emission-Computed, Single-Photon, Neurosurgical Procedures adverse effects, Postoperative Complications etiology, Spasms, Infantile etiology
- Abstract
It has been hypothesized that early seizure control may prevent children with intractable epileptic spasms (ES) from developmental regression and may contribute to better developmental outcome. The effectiveness of surgery for ES has been reported. We investigated long-term post-operative outcomes of seizure control and development in patients with symptomatic West syndrome (S-WS) who underwent epilepsy surgery. Six children who underwent surgical intervention for intractable ES were retrospectively investigated. Cortical malformations were observed on pre-operative MRI in all patients, with hemispheric or multilobar involvement in four children and focal lesions in two. Following surgery, we measured motor function, developmental age (DA), language skills, and sociopsychological function for up to 7years (mean, 4.9years). Post-operative seizure outcome was Engel Class I (n=4) or III (n=2). Motor function and DA was increased following surgery in six and five patients, respectively. Two patients started to speak in sentences following focal resection. Autistic features were noted in four of the five examined patients post-operatively. None of the patients showed developmental regression following surgery. Epilepsy surgery for S-WS with ES may result in good seizure control and improvement in motor development. Improvement in cognitive function was modest in this small cohort of children and autistic features were noted post-operatively in a substantial proportion of the children. While seizure control can be obtained by epilepsy surgery, early intervention for sociopsychological comorbidities may be warranted in children with S-WS., (Copyright © 2012 The Japanese Society of Child Neurology. Published by Elsevier B.V. All rights reserved.)
- Published
- 2012
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229. Transplanted bone marrow mononuclear cells and MSCs impart clinical benefit to children with osteogenesis imperfecta through different mechanisms.
- Author
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Otsuru S, Gordon PL, Shimono K, Jethva R, Marino R, Phillips CL, Hofmann TJ, Veronesi E, Dominici M, Iwamoto M, and Horwitz EM
- Subjects
- Animals, Body Height physiology, Body Weight physiology, Bone Matrix metabolism, Cells, Cultured, Child, Collagen genetics, Collagen metabolism, Female, Flow Cytometry, Gene Expression, Humans, Leukocytes, Mononuclear cytology, Leukocytes, Mononuclear metabolism, Lumbar Vertebrae growth & development, Male, Mesenchymal Stem Cells metabolism, Mice, Mice, Inbred C57BL, Mice, Mutant Strains, Mice, Transgenic, Osteoblasts cytology, Osteoblasts metabolism, Osteogenesis, Osteogenesis Imperfecta genetics, Osteogenesis Imperfecta physiopathology, Time Factors, Bone Marrow Transplantation methods, Leukocytes, Mononuclear transplantation, Mesenchymal Stem Cell Transplantation methods, Osteogenesis Imperfecta surgery
- Abstract
Transplantation of whole bone marrow (BMT) as well as ex vivo-expanded mesenchymal stromal cells (MSCs) leads to striking clinical benefits in children with osteogenesis imperfecta (OI); however, the underlying mechanism of these cell therapies has not been elucidated. Here, we show that non-(plastic)-adherent bone marrow cells (NABMCs) are more potent osteoprogenitors than MSCs in mice. Translating these findings to the clinic, a T cell-depleted marrow mononuclear cell boost (> 99.99% NABMC) given to children with OI who had previously undergone BMT resulted in marked growth acceleration in a subset of patients, unambiguously indicating the therapeutic potential of bone marrow cells for these patients. Then, in a murine model of OI, we demonstrated that as the donor NABMCs differentiate to osteoblasts, they contribute normal collagen to the bone matrix. In contrast, MSCs do not substantially engraft in bone, but secrete a soluble mediator that indirectly stimulates growth, data which provide the underlying mechanism of our prior clinical trial of MSC therapy for children with OI. Collectively, our data indicate that both NABMCs and MSCs constitute effective cell therapy for OI, but exert their clinical impact by different, complementary mechanisms. The study is registered at www.clinicaltrials.gov as NCT00187018.
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- 2012
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230. Clinicogenetical features of a Japanese patient with giant axonal neuropathy.
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Akagi M, Mohri I, Iwatani Y, Kagitani-Shimono K, Okinaga T, Sakai N, Ozono K, and Taniike M
- Subjects
- Child, Preschool, DNA Mutational Analysis, Family Health, Humans, Japan, Magnetic Resonance Imaging, Male, Tomography, X-Ray Computed, Cytoskeletal Proteins genetics, Giant Axonal Neuropathy genetics, Giant Axonal Neuropathy pathology, Mutation genetics
- Abstract
Giant axonal neuropathy (GAN) is a rare autosomal recessive disorder that affects both the peripheral nerves and central nervous system. Since the discovery in 2000 of the gigaxonin gene on chromosome 16q24.1 to be causative, more than 40 GAN mutations have been reported from different racial backgrounds. We report the clinicogenetic findings of a 24-year-old Japanese man with GAN. He had consanguineous parents and showed the phenotype of classical severe GAN. We found a novel homozygous nonsense mutation (p.R162X) in the GAN gene. This is the first genetically-determined Japanese case of GAN, with a follow-up period of more than 15 years. In addition, this mutation is novel. We also reviewed previous reports of GAN to see whether there is any genotype-phenotype correlation., (Copyright © 2011 The Japanese Society of Child Neurology. Published by Elsevier B.V. All rights reserved.)
- Published
- 2012
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231. Differential responses of primary auditory cortex in autistic spectrum disorder with auditory hypersensitivity.
- Author
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Matsuzaki J, Kagitani-Shimono K, Goto T, Sanefuji W, Yamamoto T, Sakai S, Uchida H, Hirata M, Mohri I, Yorifuji S, and Taniike M
- Subjects
- Acoustic Stimulation, Child, Child Development Disorders, Pervasive complications, Humans, Hyperacusis etiology, Magnetoencephalography, Male, Auditory Cortex physiopathology, Child Development Disorders, Pervasive physiopathology, Evoked Potentials, Auditory physiology, Hyperacusis physiopathology
- Abstract
The aim of this study was to investigate the differential responses of the primary auditory cortex to auditory stimuli in autistic spectrum disorder with or without auditory hypersensitivity. Auditory-evoked field values were obtained from 18 boys (nine with and nine without auditory hypersensitivity) with autistic spectrum disorder and 12 age-matched controls. Autistic disorder with hypersensitivity showed significantly more delayed M50/M100 peak latencies than autistic disorder without hypersensitivity or the control. M50 dipole moments in the hypersensitivity group were larger than those in the other two groups [corrected]. M50/M100 peak latencies were correlated with the severity of auditory hypersensitivity; furthermore, severe hypersensitivity induced more behavioral problems. This study indicates auditory hypersensitivity in autistic spectrum disorder as a characteristic response of the primary auditory cortex, possibly resulting from neurological immaturity or functional abnormalities in it., (© 2012 Wolters Kluwer Health | Lippincott Williams & Wilkins.)
- Published
- 2012
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232. [Case of Bickerstaff brainstem encephalitis associated with spindle coma and decorticate posture].
- Author
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Shimozono K, Shimono K, and Kusunoki S
- Subjects
- Adult, Autoantibodies blood, Biomarkers blood, Coma diagnosis, Coma drug therapy, Decerebrate State drug therapy, Drug Therapy, Combination, Electroencephalography, Encephalitis complications, Encephalitis drug therapy, Gangliosides immunology, Humans, Immunoglobulin G blood, Male, Methylprednisolone administration & dosage, Treatment Outcome, Brain Stem immunology, Coma etiology, Decerebrate State etiology, Encephalitis diagnosis, Encephalitis immunology, Immunoglobulins, Intravenous administration & dosage
- Abstract
A 25-years-old man experienced fever and diarrhea. Ten days later he noticed difficulty walking (day 1). On admission neurological examination revealed lethargy, dysarthria and weakness of limbs. Oculocephalic response was not be elicited and extensor toe signs were positive. In spite of treatment with aciclovir and methylprednisolone, he continued to show progressive deterioration developing to coma with decorticate posture. Autonomic symptoms (hyperhidrosis, hypersalivation and fever) and groaning were observed. Brain magnetic resonance image and brainstem evoked potential presented no abnormality, but electroencephalographic study showed a spindle pattern indicating spindle coma. Laboratory tests including cerebrospinal fluids showed no specific results. High-dose immunoglobulin was administered from day 6, and his consciousness level improved. External ophthalomoplegia and ataxic gait were observed after he became more alert. Because he had IgG type anti-GQ1b antibodies in the serum, a diagnosis was made of Bickerstaff's brainstem encephalitis (BBE). Six months after discharge he had complete resolution of his symptoms. This is the first report of spindle coma observed in a case of serologically confirmed BBE.
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- 2012
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233. Urinary volatile compounds as biomarkers for lung cancer.
- Author
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Hanai Y, Shimono K, Matsumura K, Vachani A, Albelda S, Yamazaki K, Beauchamp GK, and Oka H
- Subjects
- Adenocarcinoma pathology, Adenocarcinoma urine, Adenocarcinoma of Lung, Adult, Aged, Carcinoma, Squamous Cell pathology, Carcinoma, Squamous Cell urine, Chromatography, Gas, Diagnosis, Differential, Female, Humans, Lung metabolism, Lung pathology, Lung Neoplasms pathology, Lung Neoplasms urine, Male, Middle Aged, Principal Component Analysis, ROC Curve, Solid Phase Microextraction, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization, Adenocarcinoma diagnosis, Biomarkers, Tumor urine, Carcinoma, Squamous Cell diagnosis, Lung Neoplasms diagnosis, Pentanones urine, Volatile Organic Compounds urine
- Abstract
Lung cancer is a leading cause of deaths in cancer. Hence, developing early-stage diagnostic tests that are non-invasive, highly sensitive, and specific is crucial. In this study, we investigated to determine whether biomarkers derived from urinary volatile organic compounds (VOCs) can be used to discriminate between lung cancer patients and normal control patients. The VOCs were extracted from the headspace by solid-phase microextraction and were analyzed by gas chromatography time-of-flight mass spectrometry. Nine putative volatile biomarkers were identified as elevated in the lung cancer group. Receiver operating characteristic curve analysis was also performed, and the markers were found to be highly sensitive and specific. Next we used principal component analysis (PCA) modeling to make comparisons compare within the lung cancer group, and found that 2-pentanone may have utility in differentiating between adenocarcinoma and squamous cell carcinomas.
- Published
- 2012
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234. [Effects of botulinum toxin therapy for respiratory distress in patients with cervical hypertonia].
- Author
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Hashimoto N, Kagitani-Shimono K, Tominaga K, Kitai Y, Ikeda T, Okinaga T, Taniike M, and Ozone K
- Subjects
- Adolescent, Adult, Child, Female, Humans, Infant, Male, Treatment Outcome, Botulinum Toxins, Type A administration & dosage, Muscle Hypertonia complications, Muscle Hypertonia drug therapy, Neck Muscles physiopathology, Respiratory Insufficiency drug therapy, Respiratory Insufficiency etiology
- Abstract
Botulinum toxin A (BTX-A) therapy has been approved as a first-line therapy for spastic torticollis. However it has been suggested as that its use in patients with respiratory distress should be decided cautiously. We treated 5 patients with abnormal posture, cervical hypertonia and obstructive respiratory distress by BTX-A, and analyzed its efficacy for respiratory distress by their Tsui score and respiratory status after BTX-A therapy. All 5 patients clinically had some degree of dysphagia before BTX-A therapy. Cervical hypertonia and induced abnormal posture were improved in all patients. The youngest patient could control muscle tone after only 2 doses of BTX-A and subsequently maintained a good condition without additional BTX-A. BTX-A therapy can decrease torsion and hyperextension of the upper respiratory tract by reducing cervical hypertonia. Consequently, it may improve respiratory status. On the other hand, mild dysphagia and excessive salivation was noted in one patient for each symptom. It is safe to avoid BTX-A invasion to the anterior muscle of neck and rapid changes in the swallowing pattern.
- Published
- 2012
235. Extraction of cellulose-synthesizing activity of Gluconacetobacter xylinus by alkylmaltoside.
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Hashimoto A, Shimono K, Horikawa Y, Ichikawa T, Wada M, Imai T, and Sugiyama J
- Subjects
- Bacterial Outer Membrane Proteins chemistry, Bacterial Outer Membrane Proteins metabolism, Cellulose biosynthesis, Cellulose ultrastructure, Digitonin, Glucosyltransferases chemistry, Glucosyltransferases metabolism, Octoxynol, Spectroscopy, Fourier Transform Infrared, X-Ray Diffraction, Bacterial Outer Membrane Proteins isolation & purification, Detergents chemistry, Gluconacetobacter xylinus enzymology, Glucosides chemistry, Glucosyltransferases isolation & purification
- Abstract
This study reinvestigated the synthesis of cellulose in vitro with a well-known cellulose-producing bacterium, Gluconacetobacter xylinus. Alkylmaltoside detergents, which are more frequently used in recent structural biological researches, are uniquely used in this study to solubilize cellulose-synthesizing activity from the cell membrane of G. xylinus. Activity comparable to that previously reported is obtained, while the synthesized cellulose is crystallized into a non-native polymorph of cellulose (cellulose II) as well as the previous studies. In spite of this failure to recover the native activity to synthesize cellulose I microfibril in vitro, the product is a polymer with a degree of polymerization greater than 45 as determined by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOFMS). It was thus concluded that the established protocol can solubilize cellulose-synthesizing activity of G. xylinus with polymerizing activity., (Copyright © 2011 Elsevier Ltd. All rights reserved.)
- Published
- 2011
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236. SLC2A1 gene analysis of Japanese patients with glucose transporter 1 deficiency syndrome.
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Hashimoto N, Kagitani-Shimono K, Sakai N, Otomo T, Tominaga K, Nabatame S, Mogami Y, Takahashi Y, Imai K, Yanagihara K, Okinaga T, Nagai T, Taniike M, and Ozono K
- Subjects
- Adolescent, Asian People genetics, Child, Child, Preschool, DNA Mutational Analysis, Exons, Female, Humans, Japan, Male, Pedigree, Syndrome, Glucose Transporter Type 1 deficiency, Glucose Transporter Type 1 genetics
- Abstract
Glucose transporter 1 deficiency syndrome (Glut1-DS) is a congenital metabolic disorder characterized by refractory seizures with early infantile onset, developmental delay, movement disorders and acquired microcephaly. Glut1-DS is caused by heterozygous abnormalities of the SLC2A1 (Glut1) gene, whose product acts to transport glucose into the brain across the blood-brain barrier. We analyzed the SLC2A1 gene in 12 Japanese Glut1-DS patients who were diagnosed by characteristic clinical symptoms and hypoglycorrhachia as follows: all patients had infantile-onset seizures and mild to severe developmental delay, and ataxia was detected in 11 patients. For the 12 patients, we identified seven different mutations (three missense, one nonsense, two frameshift and one splice-site) in exons and exon-intron boundaries of the SLC2A1 gene by direct sequencing, of which six were novel mutations. Of the remaining five patients who had no point mutations and underwent investigation by multiplex ligation-dependent probe amplification, a complex abnormality with deletion and duplication was identified in one patient: this is the first case of such recombination of the SLC2A1 gene. Changes in regulatory sequences in the promoter region or genes other than SLC2A1 might be responsible for onset of Glut1-DS in the other four patients (33%) without SLC2A1 mutation.
- Published
- 2011
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237. Long-term observation of absence of REM sleep caused by pontine cavernous hemangioma.
- Author
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Kagitani-Shimono K, Kato-Nishimura K, Okinaga T, Mohri I, Tachibana N, Ozono K, and Taniike M
- Subjects
- Adolescent, Brain Stem Neoplasms pathology, Female, Hemangioma, Cavernous, Central Nervous System pathology, Humans, Sleep Apnea, Obstructive physiopathology, Sleep Deprivation physiopathology, Brain Stem Neoplasms complications, Hemangioma, Cavernous, Central Nervous System complications, Sleep Apnea, Obstructive etiology, Sleep Deprivation etiology, Sleep, REM physiology
- Published
- 2011
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238. Photochemistry of Acetabularia rhodopsin II from a marine plant, Acetabularia acetabulum.
- Author
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Kikukawa T, Shimono K, Tamogami J, Miyauchi S, Kim SY, Kimura-Someya T, Shirouzu M, Jung KH, Yokoyama S, and Kamo N
- Subjects
- Amino Acid Sequence, Arylsulfonates chemistry, Cell-Free System, DNA, Complementary metabolism, Electrodes, Hydrogen-Ion Concentration, Kinetics, Light, Models, Chemical, Molecular Sequence Data, Protons, Sequence Homology, Amino Acid, Tin Compounds chemistry, Acetabularia metabolism, Photochemistry methods, Rhodopsin chemistry
- Abstract
Acetabularia rhodopsins are the first microbial rhodopsins discovered in a marine plant organism, Acetabularia acetabulum. Previously, we expressed Acetabularia rhodopsin II (ARII) by a cell-free system from one of two opsin genes in A. acetabulum cDNA and showed that ARII is a light-driven proton pump [Wada, T., et al. (2011) J. Mol. Biol. 411, 986-998]. In this study, the photochemistry of ARII was examined using the flash-photolysis technique, and data were analyzed using a sequential irreversible model. Five photochemically defined intermediates (P(i)) were sufficient to simulate the data. Noticeably, both P(3) and P(4) contain an equilibrium mixture of M, N, and O. Using a transparent indium tin oxide electrode, the photoinduced proton transfer was measured over a wide pH range. Analysis of the pH-dependent proton transfer allowed estimation of the pK(a) values of some amino acid residues. The estimated values were 2.6, 5.9 (or 6.3), 8.4, 9.3, 10.5, and 11.3. These values were assigned as the pK(a) of Asp81 (Asp85(BR)) in the dark, Asp92 (Asp96(BR)) at N, Glu199 (Glu204(BR)) at M, Glu199 in the dark, an undetermined proton-releasing residue at the release, and the pH to start denaturation, respectively. Following this analysis, the proton transfer of ARII is discussed., (© 2011 American Chemical Society)
- Published
- 2011
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239. The seven-pass transmembrane cadherin Flamingo controls dendritic self-avoidance via its binding to a LIM domain protein, Espinas, in Drosophila sensory neurons.
- Author
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Matsubara D, Horiuchi SY, Shimono K, Usui T, and Uemura T
- Subjects
- Animals, Dendrites metabolism, Drosophila Proteins genetics, Drosophila melanogaster cytology, Drosophila melanogaster genetics, Gene Expression Profiling, Gene Expression Regulation, Developmental, Gene Knockout Techniques, Nerve Tissue Proteins genetics, Nervous System metabolism, Protein Binding, Protein Structure, Tertiary, Sensory Receptor Cells cytology, Sensory Receptor Cells metabolism, Cadherins metabolism, Drosophila Proteins metabolism, Drosophila melanogaster embryology, Drosophila melanogaster metabolism, Nerve Tissue Proteins metabolism
- Abstract
Members of the Flamingo cadherin family are required in a number of different in vivo contexts of neural development. Even so, molecular identities downstream from the family have been poorly understood. Here we show that a LIM domain protein, Espinas (Esn), binds to an intracellular juxtamembrane domain of Flamingo (Fmi), and that this Fmi-Esn interplay elicits repulsion between dendritic branches of Drosophila sensory neurons. In wild-type larvae, branches of the same class IV dendritic arborization neuron achieve efficient coverage of its two-dimensional receptive field with minimum overlap with each other. However, this self-avoidance was disrupted in a fmi hypomorphic mutant, in an esn knockout homozygote, and in the fmi/esn trans-heterozygote. A functional fusion protein, Fmi:3eGFP, was localized at most of the branch tips, and in a heterologous system, assembly of Esn at cell contact sites required its LIM domain and Fmi. We further show that genes controlling epithelial planar cell polarity (PCP), such as Van Gogh (Vang) and RhoA, are also necessary for the self-avoidance, and that fmi genetically interacts with these loci. On the basis of these and other results, we propose that the Fmi-Esn complex, together with the PCP regulators and the Tricornered (Trc) signaling pathway, executes the repulsive interaction between isoneuronal dendritic branches.
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- 2011
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240. Crystal structure of the eukaryotic light-driven proton-pumping rhodopsin, Acetabularia rhodopsin II, from marine alga.
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Wada T, Shimono K, Kikukawa T, Hato M, Shinya N, Kim SY, Kimura-Someya T, Shirouzu M, Tamogami J, Miyauchi S, Jung KH, Kamo N, and Yokoyama S
- Subjects
- Animals, Binding Sites, Catalytic Domain, Cell Membrane metabolism, Crystallography, X-Ray, Hydrogen Bonding, Hydrolysis, Marine Biology, Models, Molecular, Oocytes cytology, Oocytes metabolism, Protein Binding, Protein Conformation, Spectroscopy, Fourier Transform Infrared, Water chemistry, Water metabolism, Xenopus laevis metabolism, Acetabularia metabolism, Cyanobacteria metabolism, Light, Proton Pumps, Protons, Rhodopsin chemistry
- Abstract
Acetabularia rhodopsin (AR) is a rhodopsin from the marine plant Acetabularia acetabulum. The opsin-encoding gene from A. acetabulum, ARII, was cloned and found to be novel but homologous to that reported previously. ARII is a light-driven proton pump, as demonstrated by the existence of a photo-induced current through Xenopus oocytes expressing ARII. The photochemical reaction of ARII prepared by cell-free protein synthesis was similar to that of bacteriorhodopsin (BR), except for the lack of light-dark adaptation and the different proton release and uptake sequence. The crystal structure determined at 3.2 Å resolution is the first structure of a eukaryotic member of the microbial rhodopsin family. The structure of ARII is similar to that of BR. From the cytoplasmic side to the extracellular side of the proton transfer pathway in ARII, Asp92, a Schiff base, Asp207, Asp81, Arg78, Glu199, and Ser189 are arranged in positions similar to those of the corresponding residues directly involved in proton transfer by BR. The side-chain carboxyl group of Asp92 appears to interact with the sulfhydryl group of Cys218, which is unique to ARII and corresponds to Leu223 of BR and to Asp217 of Anabaena sensory rhodopsin. The orientation of the Arg78 side chain is opposite to the corresponding Arg82 of BR. The putative absence of water molecules around Glu199 and Arg78 may disrupt the formation of the low-barrier hydrogen bond at Glu199, resulting in the "late proton release"., (Copyright © 2011 Elsevier Ltd. All rights reserved.)
- Published
- 2011
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241. Potent inhibition of heterotopic ossification by nuclear retinoic acid receptor-γ agonists.
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Shimono K, Tung WE, Macolino C, Chi AH, Didizian JH, Mundy C, Chandraratna RA, Mishina Y, Enomoto-Iwamoto M, Pacifici M, and Iwamoto M
- Subjects
- Activin Receptors, Type I genetics, Activin Receptors, Type I metabolism, Animals, Bone Morphogenetic Proteins metabolism, Cell Differentiation drug effects, Chondrogenesis drug effects, Humans, Mesenchymal Stem Cell Transplantation, Mesenchymal Stem Cells drug effects, Mesenchymal Stem Cells metabolism, Mice, Mice, Knockout, Mice, Mutant Strains, Mice, Nude, Mice, Transgenic, Ossification, Heterotopic metabolism, Ossification, Heterotopic pathology, Receptors, Retinoic Acid deficiency, Receptors, Retinoic Acid genetics, Signal Transduction drug effects, Retinoic Acid Receptor gamma, Ossification, Heterotopic drug therapy, Receptors, Retinoic Acid agonists
- Abstract
Heterotopic ossification consists of ectopic bone formation within soft tissues after surgery or trauma. It can have debilitating consequences, but there is no definitive cure. Here we show that heterotopic ossification was essentially prevented in mice receiving a nuclear retinoic acid receptor-γ (RAR-γ) agonist. Side effects were minimal, and there was no significant rebound effect. To uncover the mechanisms of these responses, we treated mouse mesenchymal stem cells with an RAR-γ agonist and transplanted them into nude mice. Whereas control cells formed ectopic bone masses, cells that had been pretreated with the RAR-γ agonist did not, suggesting that they had lost their skeletogenic potential. The cells became unresponsive to rBMP-2 treatment in vitro and showed decreases in phosphorylation of Smad1, Smad5 and Smad8 and in overall levels of Smad proteins. In addition, an RAR-γ agonist blocked heterotopic ossification in transgenic mice expressing activin receptor-like kinase-2 (ALK2) Q207D, a constitutively active form of the receptor that is related to ALK2 R206H found in individuals with fibrodysplasia ossificans progressiva. The data indicate that RAR-γ agonists are potent inhibitors of heterotopic ossification in mouse models and, thus, may also be effective against injury-induced and congenital heterotopic ossification in humans.
- Published
- 2011
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242. Photochemistry of a putative new class of sensory rhodopsin (SRIII) coded by xop2 of Haloarcular marismortui.
- Author
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Nakao Y, Kikukawa T, Shimono K, Tamogami J, Kimitsuki N, Nara T, Unno M, Ihara K, and Kamo N
- Subjects
- Absorption, Cell Membrane genetics, Darkness, Escherichia coli cytology, Escherichia coli genetics, Histidine metabolism, Hydrogen-Ion Concentration, Isomerism, Kinetics, Photolysis, Protein Stability, Proton Pumps metabolism, Protons, Retinaldehyde chemistry, Schiff Bases chemistry, Sensory Rhodopsins isolation & purification, Sensory Rhodopsins metabolism, Spectrum Analysis, Raman, Halobacillus genetics, Photochemical Processes, Sensory Rhodopsins chemistry, Sensory Rhodopsins genetics
- Abstract
Baliga et al. (2004) [1] reported the existence of a functionally unpredictable opsin gene, named xop2, in Haloarcula marismortui, a holophilic archaeon. Ihara et al. [38] performed molecular phylogenetic analysis and determined that the product of xop2 belonged to a new class of opsins in the sensory rhodopsins. This microbial rhodopsin was therefore named H. marismortui sensory rhodopsin III (HmSRIII). Here, we functionally expressed HmSRIII in Escherichia coli cell membranes to examine the photochemistry. The wavelength of maximum absorption (λ(max)) for HmSRIII was 506nm. We observed a very slow photocycle that completed in ∼50s. Intermediates were defined as M (λ(max)∼380nm), N (λ(max)∼460nm) and O (λ(max)∼530nm) 0.01s after the flash excitation. The nomenclature for these intermediates was based on their locations along the absorption maxima of bacteriorhodopsin. Analysis of laser-flash-photolysis data in the presence and absence of azide gave the following results: (1) an equilibrium between N and O was attained, (2) the direct product of the M-decay was O but not N, and (3) the last photo-intermediate (HmSRIII') had a λ(max) similar to that of the original, and its decay rate was very slow. Resonance Raman spectroscopy revealed that this N-intermediate had 13-cis retinal conformation. Proton uptake occurred during the course of M-decay, whereas proton release occurred during the course of O-decay (or exactly N-O equilibrium). Very weak proton-pumping activity was observed whose direction is the same as that of bacteriorhodopsin, a typical light-driven proton pump., (Copyright © 2010 Elsevier B.V. All rights reserved.)
- Published
- 2011
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243. Dual-egocentre hypothesis on angular errors in visually directed pointing.
- Author
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Shimono K and Higashiyama A
- Subjects
- Adult, Female, Humans, Male, Middle Aged, Models, Psychological, Neuropsychological Tests, Young Adult, Kinesthesis physiology, Space Perception physiology, Touch Perception physiology, Visual Perception physiology
- Abstract
We examined the hypothesis that angular errors in visually directed pointing, in which an unseen target is pointed to after its direction has been seen, are attributed to the difference between the locations of the visual and kinesthetic egocentres. Experiment 1 showed that in three of four cases, angular errors in visually directed pointing equaled those in kinesthetically directed pointing, in which a visual target was pointed to after its direction had been felt. Experiment 2 confirmed the results of experiment 1 for the targets at two different egocentric distances. Experiment 3 showed that when the kinesthetic egocentre was used as the reference of direction, angular errors in visually directed pointing equaled those in visually directed reaching, in which an unseen target is reached after its location has been seen. These results suggest that in the visually and the kinesthetically directed pointing, the egocentric directions represented in the visual space are transferred to the kinesthetic space and vice versa.
- Published
- 2011
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244. Prevalence and factors associated with hepatitis C virus infection among Myanmar blood donors.
- Author
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Myo-Khin, San-San-Oo, Oo KM, Shimono K, Koide N, and Okada S
- Subjects
- Adolescent, Adult, Age Factors, Body Piercing, Female, Hepatitis C blood, Hepatitis C Antibodies blood, Humans, Male, Marital Status, Middle Aged, Multivariate Analysis, Myanmar epidemiology, Prevalence, Retrospective Studies, Tattooing, Young Adult, Blood Donors, Hepatitis C epidemiology, Hepatitis C etiology
- Abstract
We studied the prevalence of hepatitis C virus infection among blood donors from 3 hospitals of Central Myanmar and 7 hospitals of Lower Myanmar in the Yangon area, and analyzed the factors associated with the infection. The study period was from November, 2005 to June, 2007. A pre-tested questionnaire was used to obtain information on age, ethnic group, marital status, tattooing, body piercing, history of receiving transfusions, and liver diseases in self and in sexual partners. Data on seropositivity to hepatitis C, hepatitis B and human immunodeficiency virus infections were recorded. A total of 65,240 blood donors participated in the study. Their ages ranged from 18 years to 60 years (mean±SD=29.5±9.3). The male-to-female ratio was 6:1. The prevalence of the antibody to hepatitis C was found to be 0.95% with varying rates (0.34 to 2.03) among hospitals. Females had a slightly higher rate (1.06%) than males (0.93%) (p=0.237). Multivariate analyses revealed the following factors to be related to HCV infection:HIV infection, odds ratio (OR)=3.0 (p=0.003); history of liver disease, OR=8.9 (p=0.001);and age 30 years and above, OR=2.6 (p=0.001). We discuss the varying prevalences of HCV around the world.
- Published
- 2010
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245. Long-term management of hepatitis C-seropositive subjects with AntiOxidant Biofactor (AOB), a fermented food supplement.
- Author
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Myo-Khin, Myat-Tin-Htwe-Kyaw, Yi-Yi-Kyaw, Ohmar-Lwin, Myat-Phone-Kyaw, Khin-May-Oo, Shimono K, Koide N, and Okada S
- Subjects
- Adult, Alanine Transaminase blood, Dose-Response Relationship, Drug, Female, Hepatitis C, Chronic blood, Humans, Liver enzymology, Longitudinal Studies, Male, Middle Aged, Myanmar, Phenols adverse effects, Plant Extracts adverse effects, Treatment Outcome, Hepatitis C, Chronic drug therapy, Phenols therapeutic use, Plant Extracts therapeutic use
- Abstract
The efficacy of AntiOxidant Biofactor (AOB) for the management of apparently healthy subjects with chronic hepatitis C infection was investigated. A total of 60 subjects (35 males, 25 females) participated in the trial. AOB was given orally in 2 packs (3 g per pack) 3 times per day. 17 subjects had taken AOB for 3 years, 31 subjects up to 2 years, and 41 subjects up to one year. The initial mean (SD) serum alamine aminotransferase (ALT) level was 46.3+/-35.4 IU/L, and significant (p0.05, paired t-test) reductions in the mean serum ALT levels were observed at 6 months (38.6+/-21.5 IU/L), 18 months (31.9+/-18.1 IU/L), 2 years (31.2+/-14.6 IU/L), and 3 years (28.0+/-15.9 IU/L). Those presenting with high serum ALT levels (30 subjects) demonstrated significant levels (p0.05, paired t-test) of reduction in the mean serum ALT levels at 6, 12, 18, 24, and 36 months of treatment. No side effects were observed and the AOB treatment was well tolerated by all subjects.
- Published
- 2010
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246. Growth of microorganisms in total parenteral nutrition solutions containing lipid.
- Author
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Kuwahara T, Shimono K, Kaneda S, Tamura T, Ichihara M, and Nakashima Y
- Subjects
- Bacillus cereus drug effects, Bacillus cereus growth & development, Candida drug effects, Candida growth & development, Hydrogen-Ion Concentration, Serratia marcescens drug effects, Serratia marcescens growth & development, Staphylococcus aureus drug effects, Staphylococcus aureus growth & development, Sulfites pharmacology, Parenteral Nutrition, Total
- Abstract
Background: To identify the microorganisms that can grow rapidly in total parenteral nutrition (TPN) solutions, we investigated the growth of the major causes of catheter-related blood stream infection (Staphylococcus aureus, Serratia marcescens, Bacillus cereus, and Candida albicans) in TPN solutions containing lipid., Methods: The pH value of a TPN solution containing lipid (pH 6.0, containing 20 ppm of NaHSO(3)) was adjusted by the addition of HCl to 5.7, 5.4, or 4.9. The pH value of another TPN solution (pH5.5, containing 400 ppm of NaHSO(3)) was adjusted by the addition of NaOH to 5.9, 6.3, or 6.8. A specific number of each microorganism was added to 10 mL of each test solution and incubated at room temperature. The number of microorganisms was counted as colony forming units at 0, 24, and 48 hrs later., Results: C albicans increased similarly at any pH values in the TPN solution. The bacterial species also increased rapidly at pH6.0 in the solution containing 20 ppm of NaHSO(3), but growth was suppressed as the pH value was reduced, with growth halted at pH4.9. However, these bacterial species did not increase, even at pH5.9, in the other solution containing 400 ppm of NaHSO(3)., Conclusions: These results suggest that Candida species can grow rapidly in almost all TPN solutions regardless of the acidity, lipid, and NaHSO(3); also, some bacterial species may grow in TPN solutions containing lipid unless the pH value is 5.0 or less. Therefore, each TPN solution should be examined whether or not the bacterial species can proliferate.
- Published
- 2010
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247. Computational modeling of dendritic tiling by diffusible extracellular suppressor.
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Shimono K, Sugimura K, Kengaku M, Uemura T, and Mochizuki A
- Subjects
- Animals, Computational Biology, Computer Simulation, Dendrites ultrastructure, Image Processing, Computer-Assisted, Intracellular Space metabolism, Mice, Purkinje Cells physiology, Cell Growth Processes, Dendrites physiology, Extracellular Space metabolism, Models, Biological, Nerve Tissue Proteins metabolism
- Abstract
The development of neuronal class-specific dendrites is a basis for the correct functioning of the nervous system. For instance, tiling of dendritic arbors (complete, but minimum-overlapping innervation of a field) supports uniform reception of input stimuli. Previous studies have attempted to show the molecular and cellular basis of tiling, and it has been argued that the underlying inhibitory interaction between dendrites is realized by contact-dependent retraction and/or by repulsion of dendrites via extracellular branch suppressors. In this study, we showed that the development and regeneration of the tiling pattern could be reproduced by two different mathematical models (the cell compartment model and the end capped-segment model), in both of which dendrite growth is coupled with the dynamics of an extracellular suppressor that is secreted from dendrites. The analysis of the end capped-segment model in three-dimensional space showed that it generated both non-overlapping arbors as well as overlapping dendritic arbors, which patterns are reminiscent of phenotypes of previously reported tiling mutants in vivo. Moreover, the results of our numerical analysis of the 2 models suggest that tiling patterns could be achieved either by a local increase in the concentration of an intracellular branching activator or by a local decrease in the production of a suppressor at branch ends.
- Published
- 2010
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248. Inhibition of ectopic bone formation by a selective retinoic acid receptor alpha-agonist: a new therapy for heterotopic ossification?
- Author
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Shimono K, Morrison TN, Tung WE, Chandraratna RA, Williams JA, Iwamoto M, and Pacifici M
- Subjects
- Animals, Chondrogenesis drug effects, Chondrogenesis genetics, Disease Models, Animal, Gene Expression drug effects, Mice, Ossification, Heterotopic prevention & control, Osteogenesis genetics, Retinoic Acid Receptor alpha, Treatment Outcome, Ossification, Heterotopic drug therapy, Osteogenesis drug effects, Protective Agents administration & dosage, Receptors, Retinoic Acid administration & dosage, Receptors, Retinoic Acid agonists
- Abstract
Heterotopic ossification (HO) consists of formation of ectopic cartilage followed by endochondral bone and is triggered by major surgeries, large wounds, and other conditions. Current therapies, including low-dose irradiation, are not always effective and do not target the skeletogenic process directly. Because chondrogenesis requires a decrease of nuclear retinoic acid receptor alpha (RARalpha) action, we reasoned that pharmacologic activation of this receptor pathway should inhibit HO. Thus, we selected the synthetic retinoid NRX195183, a potent and highly selective RARalpha-agonist, and found that it did inhibit chondrogenesis in mouse limb micromass cultures. We established a mouse HO model consisting of subcutaneous implantation of Matrigel mixed with rhBMP-2. Control mice receiving daily oral doses of vehicle (peanut oil) or retinol (a natural nonactive retinoid precursor) developed large HO-like masses by days 9-12 that displayed abundant cartilage, endochondral bone, vessels, and marrow. In contrast, formation of HO-like masses was markedly reduced in companion mice receiving daily oral doses of alpha-agonist. These ectopic masses contained sharply reduced amounts of cartilage and bone, blood vessels, and TRAP-positive osteoclasts, and expressed markedly lower levels of master chondrogenic genes including Sox9, cartilage genes such as collagen XI and X, and osteogenic genes including Runx2. The data provide proof-of-principle evidence that a pharmacological strategy involving a selective RARalpha-agonist can indeed counteract an ectopic skeletal-formation process effectively and efficiently, and could thus represent a novel preventive treatment for HO., ((c) 2009 Orthopaedic Research Society.)
- Published
- 2010
- Full Text
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249. Growth of microorganisms in total parenteral nutrition solutions without lipid.
- Author
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Kuwahara T, Kaneda S, Shimono K, and Inoue Y
- Subjects
- Bacillus cereus drug effects, Bacillus cereus growth & development, Bacteriological Techniques, Candida albicans drug effects, Candida albicans growth & development, Dietary Fats pharmacology, Drug Contamination, Hydrogen-Ion Concentration, Lipids pharmacology, Microbial Sensitivity Tests, Microbial Viability drug effects, Serratia marcescens drug effects, Serratia marcescens growth & development, Staphylococcus aureus drug effects, Staphylococcus aureus growth & development, Bacteria growth & development, Parenteral Nutrition, Total standards, Solutions administration & dosage, Solutions pharmacology, Solutions standards
- Abstract
Background: To identify the microorganisms that can grow rapidly in total parenteral nutrition (TPN) solutions, we investigated the growth of the major causes of catheter-related blood stream infection (Staphylococcus aureus, Serratia marcescens, Bacillus cereus, and Candida albicans) in TPN solutions without lipid., Methods: Experiment 1: A commercial TPN solution without lipid containing multivitamins (pH5.6) was used. A specific number of each test microorganism was added to each 10 mL of the TPN solution and incubated at room temperature. An aliquot of test solution was sampled and inoculated to SCD agar plates at 0, 24, and 48 hrs after the addition of the microorganisms. The number of microorganisms was counted as colony forming units. Experiment 2: The other 2 commercial TPN solutions without lipid (pH5.5) were supplemented with multivitamins. The pH values of the solutions were adjusted to about 6.0, 6.5, or 7.0 using 0.5 mol/L NaOH. The addition of microorganisms, incubation, and counting were performed in the same manner., Results: Experiment 1: S. aureus, S. marcescens, and B. cereus did not increase in the TPN solution without lipid containing multivitamins (pH5.6), but C. albicans increased rapidly. Experiment 2: The 3 bacterial species did not increase even at pH6.0, but increased at pH6.5 and increased rapidly at pH7.0 in both TPN solutions. C. albicans increased similarly at any pH., Conclusion: These results suggest that bacterial species cannot grow in TPN solutions without lipid due to the acidity (pH5.6 or lower), but Candida species can grow regardless of the acidity.
- Published
- 2010
- Full Text
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250. Localized donor cells in brain of a Hunter disease patient after cord blood stem cell transplantation.
- Author
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Araya K, Sakai N, Mohri I, Kagitani-Shimono K, Okinaga T, Hashii Y, Ohta H, Nakamichi I, Aozasa K, Taniike M, and Ozono K
- Subjects
- Brain metabolism, Child, Hematopoietic Stem Cell Transplantation, Humans, Magnetic Resonance Imaging, Male, Tissue Donors, Brain pathology, Cord Blood Stem Cell Transplantation, Mucopolysaccharidosis II pathology, Mucopolysaccharidosis II therapy
- Abstract
The efficacy of hematopoietic stem cell transplantation (HSCT) for Hunter disease (deficiency of iduronate-2-sulfatase, IDS) remains unclear. We treated a 6-year-old male suffering from a severe type of Hunter disease with cord blood stem cell transplantation (CBSCT); however, he died at 10 months post-therapy due to a laryngeal post-transplantation lymphoproliferative disorder. During the follow-up period after CBSCT, his hyperactivity, estimated mental age, and brain MR findings had not improved. We assessed the efficacy of CBSCT by biochemical and pathological analyses of the autopsied tissues. There were many distended cells with accumulated substrate in the brain, but not in the liver. IDS enzyme activity in the cerebrum remained very low, although that in the liver reached about 40% of the normal control level. However, a variable number of tandem repeats analyses demonstrated a weak donor-derived band not only in the liver but also in the cerebrum. Furthermore, IDS-immunoreactivity in the liver was recognized broadly not only in Kupffer cells but also in hepatocytes. On the other hand, IDS-immunoreactivity was recognized exclusively in CD68-positive microglia/monocytes in the patient's brain; whereas that in the normal brain was also detected in neurons and oligodendrocytes. These donor-derived IDS-positive cells were predominantly localized in perivascular spaces and some of them were evidently present in the brain parenchyma. The efficacy of CBSCT was judged to be insufficient for the brain at 10 months post-therapy. However, the pathological detection of donor-derived cells in the brain parenchyma suggests the potential of HSCT for treatment of neurological symptoms in Hunter disease. This is the first neuropathological report documenting the distribution of donor-derived cells in the brain after CBSCT into a Hunter disease patient.
- Published
- 2009
- Full Text
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