201. <italic>C11orf95-RELA</italic> fusions and upregulated NF-KB signalling characterise a subset of aggressive supratentorial ependymomas that express L1CAM and nestin.
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Malgulwar, Prit Benny, Nambirajan, Aruna, Pathak, Pankaj, Faruq, Mohammed, Rajeshwari, Madhu, Singh, Manmohan, Suri, Vaishali, Sarkar, Chitra, and Sharma, Mehar Chand
- Abstract
Ependymomas (EPN) show site specific genetic alterations and a recent DNA methylation profiling study identified nine molecular subgroups.
C11orf95-RELA andYAP1 fusions characterise the RELA and YAP1 molecular subgroups, respectively, of supratentorial (ST)-EPNs. Current guidelines recommend molecular subgrouping over histological grade for accurate prognostication. Clinicopathological features of ST-EPNs in correlation withC11orf95-RELA andYAP1 fusions have been assessed in only few studies. We aimed to study these fusions in EPNs, and identify diagnostic and prognostic markers. qRT-PCR and Sanger Sequencing for the detection ofC11orf95-RELA, YAP1-MAMLD1 andYAP1-FAM118B fusion transcripts, gene expression analysis forNFKB1 , and immunohistochemistry for p53, MIB-1, nestin, VEGF, and L1CAM were performed. 88 EPNs (10-Grade I and 78-Grade II/III) from all sites were included.RELA fusions were unique to Grade II/III ST-EPNs, detected in 81.4% (22/27) and 18.5% (5/27) of pediatric and adult ST-EPNs respectively. ST-EPNs harbouringRELA fusions showed frequent grade III histology (81.5%), clear cell morphology (70.3%), upregulatedNFKB1 expression, MIB-1 labelling indices (LI) ≥ 10% (77.8%), and immunopositivity for nestin (95.7%), VEGF (72%), L1CAM (79%), and p53 (64%). Presence ofRELA fusions, L1CAM immunopositivity and MIB-1 LI ≥ 10% associated with poor outcome. L1CAM showed 81% concordance withRELA fusions.YAP1-MAMLD1 fusion was identified in a single RELA fusion negative adult anaplastic ST-EPN.RELA fusions are frequent in ST-EPNs and associate with poor outcome. L1CAM is a surrogate immunohistochemical marker.RELA fusion positive ST-EPNs strongly express nestin indicating increased stemness. Further evaluation of the interactions between NFKB and stem cell pathways is warranted. [ABSTRACT FROM AUTHOR]- Published
- 2018
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