581 results on '"Paul V, Bernhardt"'
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202. Magnetic, spectroscopic and X-ray crystallographic structural studies on copper(II) complexes of tridentate NNS Schiff base ligands formed from 2-acetylpyrazine and S-methyl- and S-benzyldithiocarbazates
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Boujemaa Moubaraki, Keith S. Murray, Aminul Huq Mirza, Malai Haniti S. A. Hamid, Paul V. Bernhardt, and Mohammad Ali
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Denticity ,Coordination sphere ,Schiff base ,Pyrazine ,Chemistry ,Ligand ,Coordination polymer ,chemistry.chemical_element ,Tautomer ,Copper ,Inorganic Chemistry ,chemistry.chemical_compound ,Crystallography ,Materials Chemistry ,Physical and Theoretical Chemistry - Abstract
New copper(II) complexes of general empirical formula, [Cu(NNS)X] (NNS = anionic forms of the 2-acetylpyrazine Schiff bases of S-methyl- and S-benzyldithiocarbazate, Hapsme and Hapsbz) and X = Cl, Br, NCS and NO have been synthesized and characterized. X-ray crystal structures of the free ligand, Hapsbz and the complexes, [Cu(apsbz)(NO)], [Cu(apsme)(NCS)] and [Cu(apsme)Cl] have been determined. In the solid state, the Schiff base, Hapsbz remains in its thione tautomeric form with the thione sulfur atom trans to the azomethine nitrogen atom. X-ray diffraction shows that the [Cu(apsbz)(NO)] complex is a novel coordination polymer in which one of the nitrogen atoms of the pyrazine ring bridges two adjacent copper(II) ions. The Schiff base is coordinated to the copper(II) ion in its iminothiolate form via the thiolate sulfur atom, the azomethine nitrogen atom and one of the pyrazine nitrogen atoms, the overall geometry of each copper atom in the polymer being close to a square-pyramid. The complexes, [Cu(apsme)X] (X = NCS, Cl) are dimers in which each copper atom adopts a five-coordinate near square-pyramidal geometry with an NS coordination environment. The Schiff base coordinates as a uninegatively charged tridentate ligand chelating via the pyridine and azomethine nitrogen atoms and the thiolate sulfur atoms. A nitrogen atom of a unidentate thiocayanate or chloride ligand and a bridging sulfur atom from a second ligand completes the coordination sphere. Room temperature μ values for the complexes in the solid state are in the range 1.70-2.0 μ typical of uncoupled or weakly coupled Cu(II) centres. Variable temperature susceptibility studies show that the chain complex displays weak ferromagnetic coupling across the pyrazine bridges, while the S-bridged dinuclear compounds display either weak ferromagnetic or weak antiferromagnetic coupling that relates to subtle bridging geometry differences. EPR studies of frozen DMF solutions give rather similar g and A values for all compounds indicative of Cu (d) ground state orbitals on the Cu centers.
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- 2009
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203. Towards the Total Synthesis of 3-Hydroxyvibsanin E
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Justin R. Denton, Paul V. Bernhardt, Huw M. L. Davies, Brett D. Schwartz, and Craig M. Williams
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chemistry.chemical_classification ,15-O-methylcyclovibsanin B ,Stereochemistry ,Organic Chemistry ,Total synthesis ,Article ,Catalysis ,Rubottom oxidation ,Hydroxylation ,chemistry.chemical_compound ,chemistry ,Stereoselectivity ,Derivative (chemistry) ,Tricyclic - Abstract
The synthesis of a silyl-protected derivative of 3-hydroxyvibsanin E has been achieved. The key step is a regio-and stereoselective C-H hydroxylation of an advanced tricyclic intermediate by means of a Rubottom oxidation.
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- 2009
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204. Synthesis and variable coordination modes of a bis-thiophene-appended macrocycle in complex with cobalt(III)
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Sharizal Hasan and Paul V. Bernhardt
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Steric effects ,Stereochemistry ,chemistry.chemical_element ,General Chemistry ,Crystal structure ,Condensed Matter Physics ,Ligand (biochemistry) ,Redox ,chemistry.chemical_compound ,Crystallography ,chemistry ,Cyclam ,Thiophene ,Cobalt ,Derivative (chemistry) ,Food Science - Abstract
The bis-thiophene appended cyclam derivative L3 (trans-6,13-dimethyl-6,13-bis(thiophene-3′-ylmethylamino)-1,4,8,11-tetraazacyclotetradecane) has been synthesised, characterised and complexed with CoIII. The crystal structure of the diprotonated ligand as its cyanoborohydride salt [H2L3][NCBH3]2 is reported. Variable coordination modes to CoIII have been identified that find the ligand binding either as a tetradentate (cyclam-like) macrocycle in the structurally characterised complexes trans-[CoL3Cl2]Cl and trans-[CoL3(NCBH3)(OH)]Cl or as a hexadentate in [CoL3]Cl3 where both functionalised exocyclic amines coordinate in trans coordination sites. In this case, we have found that the structure of the hexadentate coordinated complex [CoL3]3+ is significantly tetragonally elongated due to steric effects of the thiophene rings and this also leads to a very large 500 mV anodic shift in the CoIII/II redox potential relative to the unsubstituted hexaamine complex of CoIII.
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- 2009
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205. Molecular CoIII/FeII Cyano-Bridged Mixed-Valence Compounds with High Nuclearities and Diversity of CoIII Coordination Environments: Preparative and Mechanistic Aspects
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Paul V. Bernhardt, Manuel Martínez, and Carlos Rodríguez
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Inorganic Chemistry ,chemistry.chemical_compound ,Valence (chemistry) ,chemistry ,Lability ,Stereochemistry ,Ionic strength ,Complex formation ,Ph dependence ,Ferricyanide ,Physical and Theoretical Chemistry ,Medicinal chemistry ,Redox - Abstract
The kinetico-mechanistic study of the formation of discrete tri- and tetranuclear mixed-valence cyano-bridged (Co(III))(2)/Fe(II) and (Co(III))(3)/Fe(II) complexes has been carried out from their already described parent dinuclear Co(III)/Fe(II) and mononuclear Co(III) complexes. Different Co(III) encapsulating units have been used in order to tune both the redox potential on the mono- and dinuclear complexes and the lability of the mononuclear building blocks. The importance of outer-sphere precursor complex formation involving the oppositely charged reactants has been established by experiments conducted at high ionic strength where electrostatic effects are nullified. The influence of the pH is also crucial, and this has been linked to the pH dependence of the precursor Co(III/)(II) redox potentials in terms of enabling a redox-assisted association (at low pH) between the ferricyanide analogue and the labile Co(II) partner. A new asymmetric Co(III)L/Fe(II)/Co(III)L' complex has been fully characterized, and a series of putative (Co(III)L)(2)/Fe(II)/Co(III)L' and (Co(III)L)(3)/Fe(II) forms have been spectroscopically detected. A comparison with the mechanistic reaction pathways established for the formation of the parent dinuclear Co(III)/Fe(II) complexes indicates that an important tuning of the direct substitution and redox-catalyzed mechanism is applicable. For the formation of the trinuclear complexes, only in the most favorable conditions is a redox-assisted sequence observed. The rate and activation parameters for the reactions have been determined and are indicative of an essential outer-sphere precursor formation. Similarly, for reactions where redox-assisted mechanisms are unfavorable, only direct substitution processes have been found to be applicable, with their rate coefficients and activation parameters also agreeing with the expectations, once an outer-sphere precursor complex is formed. Formation of the tetranuclear (Co(III)L)(3)/Fe(II) complexes has only been detected on decomposition of the parent trinuclear (Co(III)L)(2)/Fe(II) complexes following reduction to their Co(II) form. The overall processes seem to be based on the outer-sphere association between the respective building blocks in such a way that both unfavorable redox potentials and Lewis basicities are overcome.
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- 2009
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206. Iron Chelators of the Dipyridylketone Thiosemicarbazone Class: Precomplexation and Transmetalation Effects on Anticancer Activity
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Paul V. Bernhardt, Danuta S. Kalinowski, Mohammad Islam, David B. Lovejoy, Des R. Richardson, and Philip C. Sharpe
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Models, Molecular ,Thiosemicarbazones ,Stereochemistry ,Antineoplastic Agents ,HL-60 Cells ,Crystallography, X-Ray ,Iron Chelating Agents ,Medicinal chemistry ,Coordination complex ,Divalent ,Ferrous ,Metal ,chemistry.chemical_compound ,Transmetalation ,Drug Discovery ,Electrochemistry ,Humans ,Semicarbazone ,Cell Proliferation ,chemistry.chemical_classification ,Molecular Structure ,Ligand ,Ketones ,chemistry ,Metals ,visual_art ,visual_art.visual_art_medium ,Molecular Medicine ,Spectrophotometry, Ultraviolet - Abstract
We previously reported a series of di-2-pyridylketone thiosemicarbazone (HDpT) chelators that showed marked and selective antitumor activity (Whitnall, M.; et al. Proc. Natl. Acad. Sci. U.S.A. 2006, 103, 14901-14906). To further understand their biological efficacy, we report the characterization and activity of their Mn(II), Co(III), Ni(II), Cu(II), and Zn(II) complexes. The X-ray crystal structures of four divalent (Mn, Ni, Cu, and Zn) and one trivalent (Fe) complexes are reported. Electrochemistry shows the Fe(III/II) and Cu(II/I) potentials of the complexes may be redox-active within cells. Stability constants were also determined for the Mn(II), Ni(II), Cu(II), and Zn(II) complexes. All divalent complexes underwent transmetalation upon encountering Fe(II), to form low spin ferrous complexes. Importantly, the divalent Mn(II), Ni(II), Cu(II), and Zn(II) complexes of the HDpT analogues are equally active in preventing proliferation as their ligands, suggesting the complexes act as lipophilic vehicles facilitating intracellular delivery of the free ligand upon metal dissociation.
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- 2008
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207. Mediated electrochemistry of dimethyl sulfoxide reductase from Rhodobacter capsulatus
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Paul V. Bernhardt, Kuan-I. Chen, and Alastair G. McEwan
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Iron-Sulfur Proteins ,Kinetics ,Reductase ,Photochemistry ,Biochemistry ,Catalysis ,Rhodobacter capsulatus ,Diffusion ,Inorganic Chemistry ,chemistry.chemical_compound ,Electrochemistry ,Organometallic Compounds ,Computer Simulation ,Dimethyl Sulfoxide ,Electrodes ,DMSO reductase ,Binding Sites ,Rhodobacter ,Molecular Structure ,biology ,Chemistry ,Dimethyl sulfoxide ,biology.organism_classification ,Catalytic cycle ,Steady state (chemistry) ,Cyclic voltammetry ,Oxidoreductases - Abstract
Electrochemically driven catalysis of the bacterial enzyme dimethyl sulfoxide (DMSO) reductase (Rhodobacter capsulatus) has been studied using the macrocyclic complex (trans-6,13-dimethyl-1,4,8,11-tetraazacyclotetradecane-6,13-diamine)cobalt(III) as a mediator. In the presence of both DMSO and DMSO reductase, the normal transient Co(III/II) voltammetric response of the complex is transformed into an amplified and sigmoidal (steady-state) waveform characteristic of a catalytic EC' mechanism. At low concentrations of DMSO (approximately K (M)) or high mediator concentrations (more than the concentration of DMSO reductase), the steady-state character of the voltammetric response disappears and is replaced by more complicated waveforms that are a convolution of transient and steady-state behavior as different steps within the catalytic cycle become rate limiting. Through digital simulation of cyclic voltammetry performed under conditions where the sweep rate, DMSO concentration, DMSO reductase concentration and mediator concentration were varied systematically, we were able to model all voltammograms with a single set of rate and equilibrium constants which provide new insights into the kinetics of the DMSO reductase catalytic mechanism that have hitherto been inaccessible from steady state or stopped flow kinetic studies.
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- 2008
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208. The Effects of Pendant vs. Fused Thiophene Attachment upon the Luminescence Lifetimes and Electrochemistry of Tris(2,2′‐bipyridine)ruthenium(II) Complexes
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Henrik K. J. Friberg, Robert O. Steen, Mark J. Riley, Simon J. Dunne, Johanna Haggstrom, Paul V. Bernhardt, and Lasse J. Nurkkala
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Chemistry ,Substituent ,chemistry.chemical_element ,Electrochemistry ,Photochemistry ,2,2'-Bipyridine ,Ruthenium ,Inorganic Chemistry ,chemistry.chemical_compound ,Bipyridine ,Polymer chemistry ,Thiophene ,Cyclic voltammetry ,Luminescence - Abstract
The electrochemical and photophysical properties for a range of ruthenium(II) tris-2,2’-bipyridine complexes in which a thiophene substituent is attached to one of the bipyridine ligands via either ...
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- 2008
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209. SoxAX Cytochromes, a New Type of Heme Copper Protein Involved in Bacterial Energy Generation from Sulfur Compounds
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Mark J. Riley, Ulrike Kappler, James R. Kilmartin, Paul V. Bernhardt, Graeme R. Hanson, Kirsty J. McKenzie, and Julia Teschner
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Stereochemistry ,Copper protein ,Coenzymes ,chemistry.chemical_element ,Cytochrome c Group ,Heme ,Biochemistry ,chemistry.chemical_compound ,Bacterial Proteins ,Enzyme kinetics ,Molecular Biology ,Histidine ,Alphaproteobacteria ,Thiosulfate ,Sulfur Compounds ,biology ,Spectrum Analysis ,Active site ,Cell Biology ,Glutathione ,Sulfur ,Recombinant Proteins ,chemistry ,biology.protein ,Energy Metabolism ,Oxidoreductases ,Oxidation-Reduction ,Copper - Abstract
SoxAX cytochromes are essential for the function of the only confirmed pathway for bacterial thiosulfate oxidation, the so-called "Sox pathway," in which they catalyze the initial formation of a S-S bond between thiosulfate and the SoxYZ carrier protein. Our work using the Starkeya novella diheme SoxAX protein reveals for the first time that in addition to two active site heme groups, SoxAX contains a mononuclear Cu(II) center with a distorted tetragonal geometry and three to four nitrogen ligands, one of which is a histidine. The Cu(II) center enhanced SoxAX activity in a newly developed, glutathione-based assay system that mimics the natural reaction of SoxAX with SoxYZ. EPR spectroscopy confirmed that the SoxAX Cu(II) center is reduced by glutathione. At pH 7 a K(m) (app) of 0.19+/-0.028 mm and a k(cat) (app) of 5.7+/-0.25s(-1) were determined for glutathione. We propose that SoxAX cytochromes are a new type of heme-copper proteins, with SoxAX-mediated S-S bond formation involving both the copper and heme centers.
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- 2008
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210. Exploiting the Anders–Gaßner variant on the Wittig reaction: new methodology for the synthesis of 3,3-dimethylacroyl enol esters
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Paul V. Bernhardt, Craig M. Williams, Ernst Anders, and Brett D. Schwartz
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chemistry.chemical_classification ,chemistry.chemical_compound ,chemistry ,Organic Chemistry ,Drug Discovery ,Wittig reaction ,One-pot synthesis ,Organic chemistry ,Biochemistry ,Chemical reaction ,Aldehyde ,Enol - Abstract
A one pot synthesis of the 3,3-dimethylacroyl enol ester function found in the vibsane type diterpenes has been developed based on the Anders–Gasner variant of the Wittig reaction (AGW reaction). This method uses easily accessible acyloxyalkylidene phosphoranes and a variety of aldehydes.
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- 2008
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211. The Role of Isomeric Effects on the Luminescence Lifetimes and Electrochemistry of Oligothienyl‐Bridged Dinuclear Tris(2,2′‐bipyridine)ruthenium(II) Complexes
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Robert O. Steen, Mark J. Riley, Paul V. Bernhardt, Edwin C. Constable, Chantal X. Schmitt, Sarah J. Angus-Dunne, Simon J. Dunne, and Lasse J. Nurkkala
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Inorganic Chemistry ,Tris ,chemistry.chemical_compound ,Denticity ,chemistry ,Polymer chemistry ,chemistry.chemical_element ,Cyclic voltammetry ,Photochemistry ,Electrochemistry ,Luminescence ,2,2'-Bipyridine ,Ruthenium - Abstract
The luminescence lifetimes (in CH 3CN at room temperature) and electrochemical potentials (in CH 3CN) of a range of mono- and bis(bidentate) 2,2′-bipyridine-capped oligothiophene-bridged Ru II comp ...
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- 2008
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212. Thermodynamic Characterization of the Redox Centers within Dimethylsulfide Dehydrogenase
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Nicole L. Creevey, Alastair G. McEwan, Paul V. Bernhardt, and Graeme R. Hanson
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Iron-Sulfur Proteins ,Molybdenum ,Binding Sites ,Rhodovulum ,biology ,Chemistry ,Stereochemistry ,fungi ,Dehydrogenase ,Electron donor ,Nitrate reductase ,biology.organism_classification ,Biochemistry ,Redox ,Cofactor ,Selenate reductase ,chemistry.chemical_compound ,biology.protein ,Thermodynamics ,Oxidoreductases ,Oxidation-Reduction ,Heme - Abstract
Dimethylsulfide (DMS) dehydrogenase is a complex heterotrimeric enzyme that catalyzes the oxidation of DMS to DMSO and allows Rhodovulum sulfidophilum to grow under photolithotrophic conditions with DMS as the electron donor. The enzyme is a 164 kDa heterotrimer composed of an alpha-subunit that binds a bis(molybdopterin guanine dinucleotide)Mo cofactor, a polyferredoxin beta-subunit, and a gamma-subunit that contains a b-type heme. In this study, we describe the thermodynamic characterization of the redox centers within DMS dehydrogenase using EPR- and UV-visible-monitored potentiometry. Our results are compared with those of other bacterial Mo enzymes such as NarGHI nitrate reductase, selenate reductase, and ethylbenzene dehydrogenase. A remarkable similarity in the redox potentials of all Fe-S clusters is apparent.
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- 2008
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213. Synthesis, spectroscopic and structural characterization of diphenyltin(IV) complexes of acetone Schiff bases of S-alkyldithiocarbazates
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Xueqing Song, Paul V. Bernhardt, Olaniran Atchade, George Eng, Malai Haniti S. A. Hamid, Leopold May, Aminul Huq Mirza, and Mohammad Ali
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Denticity ,Schiff base ,Ligand ,Stereochemistry ,chemistry.chemical_element ,Tautomer ,Inorganic Chemistry ,Crystallography ,chemistry.chemical_compound ,Trigonal bipyramidal molecular geometry ,Deprotonation ,chemistry ,Mössbauer spectroscopy ,Materials Chemistry ,Physical and Theoretical Chemistry ,Tin - Abstract
New diphenyltin(IV) complexes of empirical formula, [Sn(C6H5)2(NS)Cl] (NS = anionic forms of the acetone Schiff bases of S-methyl or S-benzyldithiocarbazate) have been prepared and characterized by IR, NMR and Mossbauer spectroscopic techniques. The crystal and molecular structures of the acetone Schiff bases of S-methyldithiocarbazate (Hacsme) and S-benzyldithiocarbazate (Hacsbz) and their tin(IV) complexes have been determined by X-ray diffraction. In the solid state, both the Schiff bases exist in their thioketo tautomeric forms with the azomethine nitrogen atom trans to the thione sulfur atom but in the tin(IV) complexes they are present in their deprotonated ene-thiolate forms being coordinated to the tin atom as bidentate chelating agents via the azomethine nitrogen and thiolate sulfur atoms. The tin atom adopts a five-coordinate, approximately trigonal bipyramidal geometry, with the thiolate sulfur atom of the Schiff base and the two phenyl groups occupying the equatorial positions. The azomethine nitrogen atom and the chlorine ligand occupy axial positions. The distortion from a regular trigonal bipyramidal or a square-pyramidal geometry is attributed to the restricted bite sizes of the five-membered chelate rings.
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- 2008
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214. Preparation, spectroscopic characterization and X-ray crystal and molecular structures of nickel(II), copper(II) and zinc(II) complexes of the Schiff base formed from isatin and S-methyldithiocarbazate (Hisa-sme)
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Lawrence R. Gahan, M. Akbar Ali, Sarah J. Smith, Hjh Junaidah Hj Abu Bakar, Paul V. Bernhardt, and Aminul Huq Mirza
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Schiff base ,Denticity ,Stereochemistry ,Ligand ,Isatin ,Tetrahedral molecular geometry ,chemistry.chemical_element ,Crystal structure ,Copper ,Inorganic Chemistry ,chemistry.chemical_compound ,Crystallography ,chemistry ,Octahedral molecular geometry ,Materials Chemistry ,Physical and Theoretical Chemistry - Abstract
Complexes of general formula, [M(isa-sme)2] · n(solvate) [M = Ni2+, Cu2+, Zn2+, Cd2+; isa-sme = monoanionic form of the Schiff base formed by condensation of isatin with S-methyldithiocarbazate; n = 1 or 1.5; solvate = MeCN, DMSO, MeOH or H2O] have been synthesized and characterized by a variety of physicochemical techniques. An X-ray crystallographic structure determination of the [Ni(isa-sme)2] · MeCN complex reveals a six-coordinate, distorted octahedral geometry. The two uninegatively charged, tridentate, Schiff base ligands are coordinated to the nickel(II) ion meridionally via the amide O-atoms, the azomethine N-atoms and the thiolate S-atoms. By contrast, the crystal structure of [Zn(isa-sme)2] · MeOH shows a four-coordinate distorted tetrahedral geometry. The two dithiocarbazate ligands are coordinated as N, S bidentate chelates with the amide O-atom not coordinated. The structure of the copper(II) complex [Cu(isa-sme)2] · DMSO is complicated and comprises two different complexes in the asymmetric unit, one four- and the other five-coordinate. The four-coordinate copper(II) has a distorted (flattened) tetrahedral geometry as seen in the Zn(II) analogue whereas the five-coordinate copper(II) has a distorted square-pyramidal geometry with one ligand coordinated to the copper(II) ion as a tridentate (N, S, O) ligand and the other coordinated as a bidentate N, S chelate. EPR spectroscopy indicates that in solution only one form is present, that being a distorted tetrahedral complex.
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- 2008
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215. CHAPTER 5. Electrochemistry of Molybdenum and Tungsten Enzymes
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Paul V. Bernhardt and Palraj Kalimuthu
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Electron transfer ,Chemistry ,Electrode ,Organic chemistry ,Reactivity (chemistry) ,Electrochemistry ,Redox ,Combinatorial chemistry ,Biosensor ,Chemically modified electrode ,Carbon paste electrode - Abstract
As nearly all Mo- and W-dependent enzymes catalyze oxidation and reduction reactions, electrochemistry is an ideal physical method to be applied in the study of the reactivity of these systems. Electrochemical communication between the enzyme and an electrode is of paramount importance and many experimental approaches can be taken to achieve this goal. In this chapter a comprehensive review of the literature of Mo and W enzyme electrochemistry is presented. Direct electrochemistry, where the enzyme is oxidized and reduced at the electrode without any mediators, is experimentally difficult but, when successful, has brought new insight to enzyme function. The use of electron transfer relays (mediators) to achieve better communication with the enzyme is more common and these cases have also been included herein. The application of Mo and W enzyme electrochemistry in biosensors and also in larger scale biotransformations is covered.
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- 2016
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216. The Influence of Ligand Substitution at the Electron Donor Center in Molecular Cyano‐Bridged Mixed‐Valent Co III /Fe II and Co III /Ru II Complexes
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Paul V. Bernhardt, Xavier Solans, Mercè Font-Bardia, Andrew P. Meacham, Beatriz Sienra, Manuel Martínez, and Fernando Bozoglian
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Coordination sphere ,Ligand ,Stereochemistry ,Center (category theory) ,chemistry.chemical_element ,Electron donor ,Redox ,Ruthenium ,Inorganic Chemistry ,chemistry.chemical_compound ,Crystallography ,chemistry ,Mixed valent ,Energy component - Abstract
In this paper we report a new variety of dinuclear cyano-bridged Co /M (M = Fe or Ru) mixed-valent complexes of the general formula [LCo(μ-NC)M(CN) (bpy)] (where L represents a pentaamine macrocycle and M = Fe or Ru with x = 4, y = 1 and z = 1 or x = 2, y = 2 and z = 3)]. The incorporation of the bpy ligand in place of cyano ligands within the coordination sphere raises the M redox potential significantly relative to the hexacyanometalate analogs we have reported previously. However, the metal-to-metal (M to Co) charge-transfer transitions are shifted to lower energies in accordance with Hush theory as a result of a decreased reorganizational energy component, which result in them overlapping with more intense MLCT (M to bpy) transitions.
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- 2007
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217. Investigating Direct Access to 2-Oxospiro[4.5]decanones via 6π-Electrocyclisation
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Rebecca H. Pouwer, Heiko Schill, Paul V. Bernhardt, and Craig M. Williams
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Pericyclic reaction ,chemistry.chemical_compound ,Scope (project management) ,chemistry ,Stereochemistry ,Organic Chemistry ,Functional group ,Microwave irradiation ,Physical and Theoretical Chemistry ,Structural motif - Abstract
The 2-oxospiro[4.5]decan-1-one (or spiro-γ-lactone) structural motif is contained within a number of natural products, for example, the clerodane family of diterpenes. Methods to construct this structural motif are somewhat limited and usually involve multiple functional group interconversions. A novel synthetic approach to this system utilising 6π-electrocyclisation has been identified and associated density functional calculations performed. Details of the scope, limitations, and ramifications of this methodology are discussed.(© Wiley-VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2007)
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- 2007
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218. Design, Synthesis, and Characterization of Novel Iron Chelators: Structure−Activity Relationships of the 2-Benzoylpyridine Thiosemicarbazone Series and Their 3-Nitrobenzoyl Analogues as Potent Antitumor Agents
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David B. Lovejoy, Yi-Tyng Liao, Danuta S. Kalinowski, Paul V. Bernhardt, Yu Yu, Philip C. Sharpe, Des R. Richardson, Mohammad Islam, and Naresh Kumar
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Thiosemicarbazones ,Pyridines ,Stereochemistry ,Iron ,Antineoplastic Agents ,Ascorbic Acid ,Crystallography, X-Ray ,Iron Chelating Agents ,Ligands ,Ferric Compounds ,Metal Chelator ,Redox ,Chemical synthesis ,Cell Line ,Hydroxylation ,Structure-Activity Relationship ,chemistry.chemical_compound ,Cell Line, Tumor ,Drug Discovery ,Pyridine ,otorhinolaryngologic diseases ,Humans ,Structure–activity relationship ,Ferrous Compounds ,Semicarbazone ,Molecular Structure ,Transferrin ,Ascorbic acid ,chemistry ,Drug Design ,Nitrobenzoates ,Molecular Medicine ,Drug Screening Assays, Antitumor ,Oxidation-Reduction ,Protein Binding - Abstract
Previously, we demonstrated that the potent antiproliferative activity of the di-2-pyridylketone thiosemicarbazone (DpT) series of Fe chelators was due to their ability to induce Fe depletion and form redox-active Fe complexes (Richardson, D. R.; et al. J. Med. Chem. 2006, 49, 6510-6521). We now examine the role of aromatic substituents on the antiproliferative and redox activity of novel DpT analogues, namely, the 2-benzoylpyridine thiosemicarbazone (BpT) and 2-(3-nitrobenzoyl)pyridine thiosemicarbazone (NBpT) series. Both series exhibited selective antiproliferative effects, with the majority having greater antineoplastic activity than their DpT homologues. This makes the BpT chelators the most active anticancer agents developed within our laboratory. The BpT series Fe complexes exhibit lower redox potentials than their corresponding DpT and NBpT complexes, highlighting their enhanced redox activity. The increased ability of BpT-Fe complexes to catalyze ascorbate oxidation and benzoate hydroxylation, relative to their DpT and NBpT analogues, suggested that redox cycling plays an important role in their antiproliferative activity.
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- 2007
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219. Isolation and Structural Characterization of Di- and Tetra-protonated Forms of the Macrocyclic Hexaaminetrans-6,13-Dimethyl-1,4,8-11-tetraazacyclodecane-6,13-diamine
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Geoffrey A. Lawrance, Allan H. White, Paul V. Bernhardt, and Brian W. Skelton
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Inorganic Chemistry ,chemistry.chemical_compound ,chemistry ,Hydrogen bond ,Stereochemistry ,Ligand ,Formula unit ,Diamine ,Amine gas treating ,Protonation ,Ferricyanide ,Adduct - Abstract
Cations derived by protonation of the ligand title compound (L) have been structurally characterized in their di- and tetra- protonated forms in the salts [HL][ClO]· 2HO and [HL][ZnCl] ·4HO. In both structures, one half of the formula unit comprises the asymmetric unit of the structure, the macrocycle being centrosymmetric, with the two macrocycles adopting similar conformations. In both salts, a pair of diagonally opposed macrocyclic secondary amine groups are protonated; in the [HL] salt, the additional pair of protons are accommodated on the exocyclic pendant amine groups. The dispositions of the pendent amines differ between the two structures, being 'equatorial' with respect to the macrocyclic ring in the [HL] salt, and 'axial' in the [H L] salt. In other structurally characterized compounds containing [HL] the equatorial disposition was found in the ferricyanide adduct, while in the tetraperchlorate salt the axial disposition was identified. The differences in disposition of the exocyclic groups are ascribed to the extensive H-bonding in the lattices.
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- 2007
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220. Macrocyclic cobalt(III) complexes as precursors for metal-polythiophene hybrid materials
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Nathan L. Kilah and Paul V. Bernhardt
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Chemistry ,Ligand ,Inorganic chemistry ,chemistry.chemical_element ,Tin oxide ,Electrochemistry ,Inorganic Chemistry ,chemistry.chemical_compound ,PEDOT:PSS ,Polymer chemistry ,Materials Chemistry ,Polythiophene ,Macrocyclic ligand ,Physical and Theoretical Chemistry ,Hybrid material ,Cobalt - Abstract
A thiophene-functionalised macrocyclic ligand trans-6,13-dimethyl-6-((thiophen-3-ylmethyl) amino)-1,4,8,1 1-tetraazacyclotetradecane-13-amine (L-1) has been prepared and complexed with Co-III. The ligand L-1 binds as a pentadentate in the crystallographically characterised complexes [CoL1(OAc)](ClO4)(2) and [(CoLCI)-C-1]Cl-2. Electro-copolymerisation of [(CoLCl)-Cl-1]Cl-2 with 3,4-ethylenedioxythiophene (EDOT) in a 1:2 ratio on a preformed poly-3,4-ethylenedioxythiophene (PEDOT) film resulted in metal-polymer hybrid films of high quality, consistency and uniformity in appearance. The copolymerised films were characterised by XPS indicating a 1:11 ratio of incorporation of complex to EDOT. Electrochemistry of the Co-PEDOT film (cast on an indium-doped tin oxide working electrode) in water revealed a Co-III/II redox couple at a potential ca. -600 mV (vs Ag/AgCl) which is similar to that seen in solution for the monomeric aqua complex [CoL1(OH2)](3+) (c) 2006 Elsevier Ltd. All rights reserved.
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- 2007
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221. Investigating Direct Alkynylation at the Bridgehead of Bicyclic Cages Using Silver(I) Acetylides
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Craig M. Williams, Carsten H. Jessen, Rebecca H. Pouwer, Paul V. Bernhardt, Jason B. Harper, Josef Michl, and Kamesh Vyakaranam
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chemistry.chemical_classification ,chemistry.chemical_compound ,Double bond ,chemistry ,Alkynylation ,Bicyclic molecule ,Adamantane ,Organic Chemistry ,Polymer chemistry ,Nucleophilic substitution ,Organic chemistry ,Physical and Theoretical Chemistry ,Bond formation - Abstract
Silver(I) acetylides facilitate direct carbon-carbon bond formation at the bridgehead position of adamantane, and in some instances related systems such as carborate anions and bicyclo [2.2.2]octanes. Substrate constraints along with attempts to further understand the underlying mechanism are presented. ((c) Wiley-VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2007).
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- 2007
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222. Structural basis of interprotein electron transfer in bacterial sulfite oxidation
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Elise L Laming, G Patricia Casas Garcia, Aaron P. McGrath, Marc Kvansakul, Megan J. Maher, Benoit Calmes, Ulrike Kappler, Jill Trewhella, Graeme R. Hanson, J. Mitchell Guss, and Paul V. Bernhardt
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Models, Molecular ,Protein Conformation ,QH301-705.5 ,Science ,Crystallography, X-Ray ,General Biochemistry, Genetics and Molecular Biology ,Electron Transport ,chemistry.chemical_compound ,Electron transfer ,Protein structure ,molybdenum ,sulfite oxidase ,Sulfite ,Bacterial Proteins ,Oxidoreductase ,Sulfite oxidase ,sinorhizobium meliloti ,Sulfites ,structural biology ,Biology (General) ,chemistry.chemical_classification ,General Immunology and Microbiology ,Hydrogen bond ,General Neuroscience ,General Medicine ,Electron acceptor ,Biophysics and Structural Biology ,electron transfer ,Electron transport chain ,Crystallography ,Kinetics ,chemistry ,Biochemistry ,Thermodynamics ,Medicine ,Other ,Oxidoreductases ,Oxidation-Reduction ,Protein Binding ,Research Article - Abstract
Interprotein electron transfer underpins the essential processes of life and relies on the formation of specific, yet transient protein-protein interactions. In biological systems, the detoxification of sulfite is catalyzed by the sulfite-oxidizing enzymes (SOEs), which interact with an electron acceptor for catalytic turnover. Here, we report the structural and functional analyses of the SOE SorT from Sinorhizobium meliloti and its cognate electron acceptor SorU. Kinetic and thermodynamic analyses of the SorT/SorU interaction show the complex is dynamic in solution, and that the proteins interact with Kd = 13.5 ± 0.8 μM. The crystal structures of the oxidized SorT and SorU, both in isolation and in complex, reveal the interface to be remarkably electrostatic, with an unusually large number of direct hydrogen bonding interactions. The assembly of the complex is accompanied by an adjustment in the structure of SorU, and conformational sampling provides a mechanism for dissociation of the SorT/SorU assembly. DOI: http://dx.doi.org/10.7554/eLife.09066.001, eLife digest A key feature of many important chemical reactions in cells is the transfer of particles called electrons from one molecule to another. The sulfite oxidizing enzymes (or SOEs) are a group of enzymes that are found in many organisms. These enzymes convert sulfite, which is a very reactive compound that can damage cells, into another compound called sulfate. As part of this process the SOE transfers electrons from sulfite to other molecules, such as oxygen or a protein called cytochrome c. In the past, researchers have described the three-dimensional structure of three SOEs using a technique called X-ray crystallography. However, it has been difficult to study how SOEs pass electrons to other molecules because of the temporary nature of the interactions. McGrath et al. studied an SOE called SorT, which is found in bacteria. The SorT enzyme passes electrons from sulfite to another protein called SorU. McGrath used X-ray crystallography to determine the three-dimensional structures of versions of these proteins from a bacterium called Sinorhizobium meliloti. This included structures of the proteins on their own, and when they were bound to each other. These structures revealed that a subtle change in the shape of SorU occurs when the proteins interact, which enables an electron to be quickly transferred. McGrath et al. also found that the interface between the two proteins showed an unexpectedly high number of contact sites. These strengthen the interaction between the two proteins, which helps to make electron transfer more efficient. However, these contact sites do not prevent the two proteins from quickly moving apart after the electrons have been transferred. The next challenge is to find out whether these observations are common to SOEs from other forms of life. DOI: http://dx.doi.org/10.7554/eLife.09066.002
- Published
- 2015
223. Synthesis, characterization and biological activities of semicarbazones and their copper complexes
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Paul V. Bernhardt, Taracad K. Venkatachalam, David C. Reutens, Kris Thurecht, Nicholas L. Fletcher, Gregory K. Pierens, and Christopher J. Noble
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Thiosemicarbazones ,Stereochemistry ,Cell Survival ,Dimer ,chemistry.chemical_element ,Antineoplastic Agents ,Crystal structure ,010402 general chemistry ,Crystallography, X-Ray ,01 natural sciences ,Biochemistry ,law.invention ,Inorganic Chemistry ,chemistry.chemical_compound ,Inhibitory Concentration 50 ,Structure-Activity Relationship ,law ,Coordination Complexes ,Cell Line, Tumor ,Polymer chemistry ,Humans ,Dimethyl Sulfoxide ,Electron paramagnetic resonance ,Semicarbazone ,Semicarbazones ,Molecular Structure ,010405 organic chemistry ,Electron Spin Resonance Spectroscopy ,Epithelial Cells ,Copper ,0104 chemical sciences ,Monomer ,chemistry ,X-ray crystallography ,Solvents ,Single crystal ,Dimerization ,Sulfur - Abstract
Substituted semicarbazones/thiosemicarbazones and their copper complexes have been prepared and several single crystal structures examined. The copper complexes of these semicarbazone/thiosemicarbazones were prepared and several crystal structures examined. The single crystal X-ray structure of the pyridyl-substituted semicarbazone showed two types of copper complexes, a monomer and a dimer. We also found that the p-nitrophenyl semicarbazone formed a conventional 'magic lantern' acetate-bridged dimer. Electron Paramagnetic Resonance (EPR) of several of the copper complexes was consistent with the results of single crystal X-ray crystallography. The EPR spectra of the p-nitrophenyl semicarbazone copper complex in dimethylsulfoxide (DMSO) showed the presence of two species, confirming the structural information. Since thiosemicarbazones and semicarbazones have been reported to exhibit anticancer activity, we examined the anticancer activity of several of the derivatives reported in the present study and interestingly only the thiosemicarbazone showed activity while the semicarbazones were not active indicating that introduction of sulphur atom alters the biological profile of these thiosemicarbazones.
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- 2015
224. Engineering PQQ-glucose dehydrogenase into an allosteric electrochemical Ca(2+) sensor
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Zhong Guo, Kirill Alexandrov, Palraj Kalimuthu, Viktor Stein, Siro Perez-Alcala, Wayne A. Johnston, and Paul V. Bernhardt
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Analyte ,Calmodulin ,Nanotechnology ,Dehydrogenase ,macromolecular substances ,02 engineering and technology ,Biosensing Techniques ,010402 general chemistry ,Protein Engineering ,01 natural sciences ,Redox ,Catalysis ,Allosteric Regulation ,Glucose dehydrogenase ,Materials Chemistry ,Humans ,biology ,Chemistry ,technology, industry, and agriculture ,Metals and Alloys ,Glucose 1-Dehydrogenase ,General Chemistry ,Protein engineering ,Electrochemical Techniques ,021001 nanoscience & nanotechnology ,Amperometry ,0104 chemical sciences ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,Ceramics and Composites ,biology.protein ,Calcium ,0210 nano-technology ,Biosensor - Abstract
Electrochemical biosensors convert biological events to an electrical current. To date most electrochemical biosensors exploit activities of naturally occurring enzymes. Here we demonstrated that insertion of a calmodulin domain into the redox enzyme PQQ-glucose dehydrogenase resulted in a selective Ca(2+) biosensor that could be used to rapidly measure Ca(2+) concentrations in human biological fluids. We were able to convert a point-of-care glucometer into Ca(2+) monitor by refurbishing it with the developed biosensor. We propose that similar engineering strategies may be used to create highly specific electrochemical biosensors to other analytes. Compatibility with cheap and ubiquitous amperometric detectors is expected to accelerate progression of these biosensors into clinical applications.
- Published
- 2015
225. ChemInform Abstract: New PKS-NRPS Tetramic Acids and Pyridinone from an Australian Marine-Derived Fungus, Chaunopycnis sp
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Angela A. Salim, Li Li, Zeinab G. Khalil, Breno Pannia Espósito, Robert J. Capon, Michelle Quezada, Zhuo Shang, and Paul V. Bernhardt
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Circular dichroism ,biology ,Chemistry ,Stereochemistry ,General Medicine ,Tetramic acid ,Fungus ,biology.organism_classification ,Siphonaria ,Metal ,Chaunopycnis sp ,visual_art ,visual_art.visual_art_medium ,Chelation ,Antibacterial activity - Abstract
Chemical analysis of a marine-derived fungus, Chaunopycnis sp. (CMB-MF028), isolated from the inner tissue of a pulmonate false limpet Siphonaria sp., collected from rock surfaces in the intertidal zone of Moora Park, Shorncliffe, Queensland, yielded the tetramic acid F-14329 (1) and new analogues, chaunolidines A-C (2-4), together with the new pyridinone chaunolidone A (5), and pyridoxatin (6). Structures inclusive of absolute configurations were assigned to 1-6 on the basis of detailed spectroscopic analysis, X-ray crystallography, electronic circular dichroism (ECD), biosynthetic considerations and chemical interconversion. Chaunolidine C (4) exhibits modest Gram-positive antibacterial activity (IC50 5-10 μM), while chaunolidone A (5) is a selective and potent inhibitor (IC50 0.09 μM) of human non-small cell lung carcinoma cells (NCI-H460). Tetramic acids 1-4 form metal chelates with Fe(III), Al(III), Cu(II), Mg(II) and Zn(II).
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- 2015
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226. Author response: Structural basis of interprotein electron transfer in bacterial sulfite oxidation
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G Patricia Casas Garcia, Paul V. Bernhardt, Ulrike Kappler, Megan J. Maher, Marc Kvansakul, Benoit Calmes, Jill Trewhella, Aaron P. McGrath, Graeme R. Hanson, J. Mitchell Guss, and Elise L Laming
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Electron transfer ,chemistry.chemical_compound ,Sulfite ,Basis (linear algebra) ,Chemistry ,Photochemistry - Published
- 2015
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227. Viridicatumtoxins: Exploring structural diversity and antibiotic properties
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Angela A. Salim, Z Shang, Robert J. Capon, Paul V. Bernhardt, Zeinab G. Khalil, and Michelle Quezada
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Pharmacology ,business.industry ,medicine.drug_class ,Organic Chemistry ,Antibiotics ,Pharmaceutical Science ,Structural diversity ,Analytical Chemistry ,Biotechnology ,Complementary and alternative medicine ,Drug Discovery ,Molecular Medicine ,Medicine ,business - Published
- 2015
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228. Synthesis, characterization and X-ray crystallographic structural study of copper(II) and nickel(II) complexes of the 2-quinoline carboxaldehyde Schiff base of S-methyldithiocarbazate (Hqaldsme)
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Malai Haniti S. A. Hamid, M. Akbar Ali, Aminul Huq Mirza, Paul V. Bernhardt, and Fatriah Hj Bujang
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Schiff base ,Quinoline ,chemistry.chemical_element ,Crystal structure ,Copper ,Inorganic Chemistry ,chemistry.chemical_compound ,Crystallography ,Nickel ,Monomer ,chemistry ,Octahedral molecular geometry ,Materials Chemistry ,Molecule ,Physical and Theoretical Chemistry - Abstract
Complexes of general formulae, [Cu(qaldsme)(X)(CH3OH)(n)] and [Ni(qaldsme)(2)] (.) 0.5CH(3)CN (qaldsme = anionic form of the 2-quinoline carboxaldehyde Schiff base of S-methyldithiocarbazate; X = NCS-, I-, NO3-; n = 0 or 1) have been synthesized and characterized by magnetic and spectroscopic techniques. X-ray crystal structure determination of [Cu(qaldsme)(ONO2)(CH3OH)] (1), [Cu(qaldsme)(NCS)](2) (2) and [Ni(qaldsme)(2)] (.) 0.5CH(3)CN (4) shows that the nitrato-complex of copper (1) is monomeric and five-coordinate and the thiocyanato-complex (2) has a novel thiolate sulfur-bridged dimeric structure in which each of the copper(II) ions adopts a five-coordinate, approximately square-pyramidal geometry, with a CuN3S2 coordination kernel. The nickel(II) complex (3) has a distorted octahedral geometry with meridional dispositions of the two uninegatively charged tridentate NNS ligands. In all these complexes, the Schiff bases are coordinated in their iminothiolate forms via the quinoline nitrogen atom, the azomethine nitrogen atom and the thiolate sulfur atom. (c) 2006 Elsevier Ltd. All rights reserved.
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- 2006
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229. Preparation and characterization of pentagonal-bipyramidal zinc(II) and cadmium(II) complexes of a neutral N3S2 thiosemicarbazone derived from 2N-methylthiosemicarbazide and the X-ray crystal and molecular structures of the free ligand and its cadmium(II) complex, Cd(dap-2NMetsc)(NO3)2
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Mohammad Ali, William Bin Ejau, Aminul Huq Mirza, and Paul V. Bernhardt
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Cadmium ,Denticity ,Stereochemistry ,Ligand ,chemistry.chemical_element ,Zinc ,Crystal structure ,Inorganic Chemistry ,chemistry.chemical_compound ,Crystallography ,Pentagonal bipyramidal molecular geometry ,chemistry ,Pyridine ,Materials Chemistry ,Physical and Theoretical Chemistry ,Single crystal - Abstract
A new pentadentate thiosemicarbazone has been synthesized and structurally characterized by spectroscopic and X-ray diffraction techniques. It reacts with zinc(II) and cadmium(II) nitrate producing crystalline complexes of general formula, [M(dap-(2) NMetsc)(NO3)(2)] (M = Zn2+, Cd2+; dap-(2)NMetsc = 2,6-diacetylpyridine bis(N-2-methylthiosemicarbazone)) which have been characterized by a variety of physico-chemical techniques. X-ray crystallographic structure determination of the free ligand shows that, in the solid state, it remains in the E form about the azomethine bonds with both the thione sulfur and pyridine nitrogen atoms trans to the azomethine nitrogen atoms. A single crystal X-ray structure determination of the [Cd(dap-(2) NMetsc)(NO3)(2)] complex shows that the ligand is coordinated to the cadmium(II) ion via the two azomethine nitrogen atoms, the pyridine nitrogen atom and the two thione sulfur atoms. The thiosemicarbazone occupies the equatorial plane and the two nitrate ligands are coordinated to the cadmium atom as monodentate ligands occupying axial positions, the overall geometry of the complex being a distorted pentagonal-bipyramid. (c) 2006 Elsevier Ltd. All rights reserved.
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- 2006
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230. Direct electrochemistry of human and rat NADPH cytochrome P450 reductase
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Paul V. Bernhardt, Alka Shukla, and Elizabeth M. J. Gillam
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Flavin adenine dinucleotide ,chemistry.chemical_classification ,biology ,Stereochemistry ,Cytochrome P450 reductase ,Cytochrome P450 ,Redox ,lcsh:Chemistry ,chemistry.chemical_compound ,Electron transfer ,chemistry ,lcsh:Industrial electrochemistry ,lcsh:QD1-999 ,Oxidoreductase ,Electrochemistry ,biology.protein ,Proton-coupled electron transfer ,Heme ,lcsh:TP250-261 - Abstract
The diflavo-protein NADPH cytochrome P450 reductase (CPR) is the key electron transfer partner for all drug metabolizing cytochrome P450 enzymes in humans. The protein delivers, consecutively, two electrons to the heme active site of the P450 in a carefully orchestrated process which ultimately leads to the generation of a high valent oxo-heme moiety. Despite its central role in P450 function, no direct electrochemical investigation of the purified protein has been reported. Here we report the first voltammetric study of purified human CPR where responses from both the FMN and FAD cofactors have been identified using both cyclic and square wave voltammetry. For human CPR redox responses at −2 and −278 mV (with a ratio of 1e−:3e−) vs NHE were seen at pH 7.9 while the potentials for rat CPR at pH 8.0 were −20 and −254 mV. All redox responses exhibit a pH dependence of approximately −59 mV/pH unit consistent with proton coupled electron transfer reactions of equal stoichiometry. Keywords: Cytochrome P450 reductase, Protein, Voltammetry
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- 2006
231. Dipyridyl Thiosemicarbazone Chelators with Potent and Selective Antitumor Activity Form Iron Complexes with Redox Activity
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Dakshita Senaratne, Mohammad Islam, David B. Lovejoy, Danuta S. Kalinowski, Paul V. Bernhardt, Des R. Richardson, and Philip C. Sharpe
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Models, Molecular ,Thiosemicarbazones ,Magnetic Resonance Spectroscopy ,Ketone ,Chemical Phenomena ,Spectrophotometry, Infrared ,Pyridines ,Stereochemistry ,Iron ,Hydrazone ,Antineoplastic Agents ,Ascorbic Acid ,Crystallography, X-Ray ,Hydroxylation ,Iron Chelating Agents ,Benzoates ,Redox ,Chemical synthesis ,Structure-Activity Relationship ,chemistry.chemical_compound ,Drug Discovery ,Electrochemistry ,Humans ,Structure–activity relationship ,Semicarbazone ,chemistry.chemical_classification ,Chemistry, Physical ,3-Aminopyridine-2-carboxaldehyde thiosemicarbazone ,DNA ,Combinatorial chemistry ,chemistry ,Lipophilicity ,Molecular Medicine ,Oxidation-Reduction ,Plasmids - Abstract
There has been much interest in the development of iron (Fe) chelators for the treatment of cancer. We developed a series of di-2-pyridyl ketone thiosemicarbazone (HDpT) ligands which show marked and selective antitumor activity in vitro and in vivo. In this study, we assessed chemical and biological properties of these ligands and their Fe complexes in order to understand their marked activity. This included examination of their solution chemistry, electrochemistry, ability to mediate redox reactions, and antiproliferative activity against tumor cells. The higher antiproliferative efficacy of the HDpT series of chelators relative to the related di-2-pyridyl ketone isonicotinoyl hydrazone (HPKIH) analogues can be ascribed, in part, to the redox potentials of their Fe complexes which lead to the generation of reactive oxygen species. The most effective HDpT ligands as antiproliferative agents possess considerable lipophilicity and were shown to be charge neutral at physiological pH, allowing access to intracellular Fe pools.
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- 2006
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232. Towards the Total Synthesis of Vibsanin E, 15-O-Methylcyclovibsanin B,3-Hydroxyvibsanin E, Furanovibsanin A, and 3-O-Methylfuranovibsanin A
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Craig M. Williams, Stefan Wiedemann, Paul V. Bernhardt, Brett D. Schwartz, David Tilly, and Ralf Heim
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Viburnum awabuki ,Chemistry ,15-O-methylcyclovibsanin B ,Stereochemistry ,Organic Chemistry ,Total synthesis ,Vibsanin E ,Physical and Theoretical Chemistry - Abstract
Studies detailing synthetic approaches to a variety of biosynthetically related vibsanin-type diterpenes (i.e. vibsanin E, 15-O-methylcyclovibsanin B, 3-hydroxy-vibsanin E, furano-vibsanin A, and 3-O-methylfuranovibsanin A) are discussed. Biogenetically modelled approaches are coupled with an in-vestigation of classical and modern six- to seven-membered ring-expansion protocols, which gain access to the central core of these natural products. (c) Wiley-VCH Verlag GmbH & Co.
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- 2006
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233. Polyamines from polyols – Pathways to azamacrocycles with hydroxymethyl pendent groups
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Jack M. Harrowfield, Paul V. Bernhardt, Pierre Thuéry, Doo Cheon Yoon, Jee Young Kim, Jeong Hwan Cho, Sujandi, and Yang Kim
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Inorganic Chemistry ,chemistry.chemical_compound ,Denticity ,chemistry ,Stereochemistry ,Materials Chemistry ,Hydroxymethyl ,Reaction intermediate ,Crystal structure ,Physical and Theoretical Chemistry ,Polyamine - Abstract
Several pathways to macromonocylic polyamine ligands with pendent hydroxymethyl substituents have been explored. The new ligands have all been characterised by single-crystal, X-ray structure determinations on their complexes with Co(III) (one case) and Cu(II). As in some related systems, four-membered ring species, here oxetanes rather than azetidines, appear to be involved as reaction intermediates and can be quite readily isolated, providing reactants of potential for the construction of even more complicated multidentate ligands.
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- 2006
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234. Dimeric allylpalladium(II) complexes with pyrazolate bridges: Synthesis, characterization, structure and thermal behaviour
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R.K. Mishra, Shailendra K. Kulshreshtha, Anshu Singhal, Edward R. T. Tiekink, and Paul V. Bernhardt
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chemistry.chemical_classification ,Chemistry ,Stereochemistry ,Vapor pressure ,Organic Chemistry ,Enthalpy ,chemistry.chemical_element ,Nuclear magnetic resonance spectroscopy ,Biochemistry ,Coordination complex ,Inorganic Chemistry ,Crystallography ,chemistry.chemical_compound ,Materials Chemistry ,Molecule ,Thermal stability ,Physical and Theoretical Chemistry ,Acetonitrile ,Palladium - Abstract
The synthesis, characterization and thermal behaviour of some new dimeric allylpalladium (II) complexes bridged by pyrazolate ligands are reported. The complexes [Pd(mu-3, 5-R'(2)pz)(eta(3)-CH2C(R)CH2)](2) [R = H; R'= CH(CH3)(2) (1a); R = H, R' = C(CH3)(3) (1b), R = H; R' = CF3 (1c); R = CH3, R' = CH(CH3)(2) (2a); R = CH3, R' = C(CH3)(3) (2b); and R = CH3, R' = CF3 (2c)] have been prepared by the room temperature reaction of [Pd(eta(3)-CH2C(R)CH2)(acac)](acac = acetylacetonate) with 3,5-disubstituted pyrazoles in acetonitrile solution. The complexes have been characterized by NMR (H-1, C-13{H-1}), FT-IR, and elemental analyses. The structure of a representative complex, viz. 2c, has been established by single-crystal X-ray diffraction. The dinuclear molecule features two formally square planar palladium centres which are bridged by two pyrazole ligands and the coordination of each metal centre is completed by allyl substituents. The molecule has non-crystallographic mirror symmetry. Thermogravimetric studies have been carried out to evaluate the thermal stability of these complexes. Most of the complexes thermally decompose in argon atmosphere to give nanocrystals of palladium, which have been characterized by XRD, SEM and TEM. However, complex 2c can be sublimed in vacuo at 2 mbar without decomposition. The equilibrium vapour pressure of 2c has been measured by the Knudsen effusion technique. The vapour pressure of the complex 2c could be expressed by the relation: In (p/Pa)(+/- 0.06) = -18047.3/T + 46.85. The enthalpy and entropy of vapourization are found to be 150.0 +/- 3 kJ mol(-1) and 389.5 +/- 8 J K-1 mol(-1), respectively. (c) 2005 Elsevier B.V. All rights reserved.
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- 2006
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235. Direct electrochemically driven catalysis of bovine milk xanthine oxidase
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Michael J. Honeychurch, Paul V. Bernhardt, and Alastair G. McEwan
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biology ,Stereochemistry ,Allopurinol ,Dehydrogenase ,Xanthine ,Cofactor ,Enzyme catalysis ,lcsh:Chemistry ,chemistry.chemical_compound ,lcsh:Industrial electrochemistry ,lcsh:QD1-999 ,chemistry ,Xanthine dehydrogenase ,Electrochemistry ,biology.protein ,medicine ,Uric acid ,Xanthine oxidase ,lcsh:TP250-261 ,medicine.drug - Abstract
The complex molybdoenzyme xanthine oxidase (XO) catalyses the oxidation of xanthine to uric acid. Here we report the first direct (unmediated) catalytic electrochemistry of the enzyme in the presence of xanthine. The only non-turnover response (without substrate present) is a sharp two-electron wave from the FAD cofactor at −242 mV vs. NHE (pH 8.0). Upon addition of xanthine to the electrochemical cell a pronounced electrocatalytic anodic current appears at ca. +300 mV vs. NHE, but the FAD peak remains. This is unusual as the onset of catalysis should occur at the potential of the FAD cofactor (the site at which oxygen or NAD+ binds to the enzyme in solution). The observed electrochemical catalysis is prevented by the addition of known XO inhibitors allopurinol or cyanide. Keywords: Xanthine oxidase, Enzyme, Catalysis, Voltammetry
- Published
- 2006
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236. Electronic Energy-Transfer Rate Constants for Geometrical Isomers of a Bichromophoric Macrocyclic Complex
- Author
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Evan G. Moore, Paul V. Bernhardt, Trevor A. Smith, and Mark J. Riley
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Anthracene ,Stereochemistry ,Crystal structure ,Acceptor ,Inorganic Chemistry ,chemistry.chemical_compound ,Reaction rate constant ,chemistry ,Cyclam ,Physical chemistry ,Molecule ,Physical and Theoretical Chemistry ,Conformational isomerism ,Cis–trans isomerism - Abstract
The rate of electronic energy transfer (EET) between a naphthalene donor and an anthracene acceptor in [ZnL(3)](ClO(4))(2) and [ZnL(4)](ClO(4))(2) was determined by time-resolved fluorescence measurements, where L(3) and L(4) are the geometrical isomers of 6-[(anthracen-9-ylmethyl)amino]-trans-6,13-dimethyl-1,4,8,11-tetraazacyclotetradecane-13-amine (L(2)), substituted with either a naphthalen-1-ylmethyl or naphthalen-2-ylmethyl donor, respectively. The energy-transfer rate constant, k(EET), was determined to be (0.92 +/- 0.02) x 10(9) s(-1) for the naphthalen-1-ylmethyl-substituted isomer, while that for the naphthalen-2-ylmethyl-substituted isomer is somewhat faster, with k(EET) = (1.31 +/- 0.01) x 10(9) s(-1). The solid-state structure of [ZnL(3)Cl]ClO(4) has been determined, and using molecular modeling calculations, the likely distributions of solution conformations in CH(3)CN have been evaluated for both complexes. The calculated conformational distributions in the common trans-III N-based isomeric form gave Förster EET rate constants that account for the differences observed and are in excellent agreement with the experimental values. It is shown that the full range of conformers must be considered to accurately reproduce the observed EET kinetics.
- Published
- 2005
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237. Complexes of Cytotoxic Chelators from the Dipyridyl Ketone Isonicotinoyl Hydrazone (HPKIH) Analogues
- Author
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Paul V. Bernhardt, Johan Mattsson, and Des R. Richardson
- Subjects
Models, Molecular ,Ketone ,Pyridines ,Stereochemistry ,Hydrazone ,Crystal structure ,Crystallography, X-Ray ,Ligands ,Electrochemistry ,Redox ,Medicinal chemistry ,Coordination complex ,Inorganic Chemistry ,2,2'-Dipyridyl ,Cell Line, Tumor ,Metals, Heavy ,Divalent metal ions ,Organometallic Compounds ,Tumor Cells, Cultured ,Humans ,Physical and Theoretical Chemistry ,Cell Proliferation ,Chelating Agents ,chemistry.chemical_classification ,Molecular Structure ,Chemistry ,Hydrazones ,Ketones ,Solvent ,Oxidation-Reduction - Abstract
In an effort to better understand the antiproliferative effects of the tridentate hydrazone chelators di-2-pyridyl ketone isonicotinoyl hydrazone (HPKIH) and di-2-pyridyl ketone benzoyl hydrazone (HPKBH), we report the coordination chemistry of these ligands with the divalent metal ions, Mn, Co, Ni, Cu, and Zn. These complexes are compared with their Fe(II) analogues which were reported previously. The crystal structures of Co(PKIH)(2), Ni(PKIH)(2), Cu(PKIH)(2), Mn(PKBH)(2), Ni(PKBH)(2), Cu(PKBH)(2), and Zn(PKBH)(2) are reported where similar bis-tridenate coordination modes of the ligands are defined. In pure DMF, all complexes except the Zn(II) compounds exhibit metal-centered M(III/II) (Mn, Fe, Co, Ni) or M(II/I) (Cu) redox processes. All complexes show ligand-centered reductions at low potential. Electrochemistry in a mixed water/DMF solvent only elicited metal-centered responses from the Co and Fe complexes. Remarkably, all complexes show antiproliferative activity against the SK-N-MC neuroepithelioma cell line similar to (HPKIH) or significantly greater than that of the (HPKBH) ligand which suggests a mechanism that does not only involve the redox activity of these complexes. In fact, we suggest that the complexes act as lipophilic transport shuttles that allow entrance to the cell and enable the delivery of both the ligand and metal which act in concert to inhibit proliferation.
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- 2005
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238. Intra- vs Intermolecular Photoinduced Electron Transfer Reactions of a Macrocyclic Donor−Acceptor Dyad
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Evan G. Moore, Alexandre Fürstenberg, Mark J. Riley, Paul V. Bernhardt, and Eric Vauthey
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Anthracene ,chemistry.chemical_compound ,chemistry ,Intramolecular force ,ddc:540 ,Intermolecular force ,Cyclam ,Free base ,Physical and Theoretical Chemistry ,Chromophore ,Photochemistry ,Fluorescence ,Photoinduced electron transfer - Abstract
The synthesis, structural characterization, and photophysical behavior of a 14-membered tetraazamacrocycle with pendant 4-dimethylaminobenzyl (DMAB) and 9-anthracenylmethyl groups is reported (L-3, 6-((9-anthracenylmethyl)amino)-trans-6,13-dimethyl-13-((4-dimethylaminobenzyl)amino)-1,4,8,11-tetraaza-cyclotetradecane). In its free base form, this compound displays rapid intramolecular photoinduced electron transfer (PET) quenching of the anthracene emission, with both the secondary amines and the DMAB group capable of acting as electron donors. When complexed with Zn(II), the characteristic fluorescence of the anthracene chromophore is restored as the former of these pathways is deactivated by coordination. Importantly, it is shown that the DMAB group, which remains uncoordinated and PET active, acts only very weakly to quench emission, by comparison to the behavior of a model Zn complex lacking the pendant DMAB group, [ZnL2](2+) (Chart 1). By contrast, Stern-Volmer analysis of intermolecular quenching of [ZnL2](2+) by N,N-dimethylaniline (DMA) has shown that this reaction is diffusion limited. Hence, the pivotal role of the bridge in influencing intramolecular PET is highlighted.
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- 2005
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239. Synthesis, characterization and X-ray crystal structures of dinuclear nickel(II) complexes of a novel potentially hexadentate but functionally tetradentate binucleating ligand
- Author
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Feroza Karim, Mohammad Ali, Paul V. Bernhardt, Aminul Huq Mirza, and Mohamed Nazimuddin
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inorganic chemicals ,Schiff base ,Stereochemistry ,Ligand ,Dimer ,Imine ,chemistry.chemical_element ,Crystal structure ,Tautomer ,Inorganic Chemistry ,chemistry.chemical_compound ,Crystallography ,Nickel ,chemistry ,Pyridine ,Materials Chemistry ,Physical and Theoretical Chemistry - Abstract
A binucleating potentially hexadentate chelating agent containing oxygen, nitrogen and sulfur as potential donor atoms (H2ONNO) has been synthesized by condensing alpha,alpha-xylenebis(N-methyldithiocarbazate) with 2,4-pentanedione. An X-ray crystallographic structure determination shows that the Schiff base remains in its ketoimine tautomeric form with the protons attached to the imine nitrogen atoms. The reaction of the Schiff base with nickel(II) acetate in a 1:1 stoichiometry leads to the formation of a dinuclear nickel(II) complex [Ni(ONNO)](2) (ONNO2- = dianionic form of the Schiff base) containing N,O-chelated tetradentate ligands, the sulfur donors remaining uncoordinated. A single crystal X-ray structure determination of this dimer reveals that each ligand binds two low spin nickel(II) ions, bridged by a xylyl group. The nickel(II) atoms adopt a distorted square-planar geometry in a trans-N2O2 donor environment. Reaction of the Schiff base with nickel(II) acetate in the presence of excess pyridine leads to the formation of a similar dinuclear complex, [Ni(ONNO)(py)](2), but in this case comprises five coordinate high-spin Ni(II) ions with pyridine ligands occupying the axial coordination sites as revealed by X-ray crystallographic analysis. (c) 2005 Published by Elsevier B.V.
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- 2005
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240. Molecular mixed-valence cyanide bridged CoIII–FeII complexes
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Brendan P. Macpherson, Fernando Bozoglian, Paul V. Bernhardt, and Manuel Martínez
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Substitution reaction ,Prussian blue ,Valence (chemistry) ,Chemistry ,Molecular electronics ,Photochemistry ,Redox ,Inorganic Chemistry ,Metal ,Crystallography ,chemistry.chemical_compound ,Electrochromism ,visual_art ,Materials Chemistry ,visual_art.visual_art_medium ,Macrocyclic ligand ,Physical and Theoretical Chemistry - Abstract
Cyano-bridged mixed-valence compounds have been known for a long time, i.e., Prussian Blue polymeric solids. Nevertheless, the interest in discrete complexes having a well-defined molecular nuclearity has emerged more recently. There are numerous examples of cyano-bridged mixed-valence complexes in the recent literature, as they show promising and useful applications in electrochromism, molecular magnetism and molecular electronics. In this paper, the reactivity, synthetic and structural chemistry, as well as some physical and chemical properties, of a series of discrete dinuclear mixed-valence cyano-bridged complexes of general formulae [LnCoIII(mu NC)Fe-II(CN)(5)](-) (L = pentadentate macrocyclic ligand) are reviewed. Special emphasis is given to the synthetic strategy, redox properties and metal-to-metal-charge-transfer (MMCT) band energy. Tuning the MMCT transition energy has been possible by changing the redox potential of the metal centers, both through structural and outer-sphere changes. The redox processes that involve the appearance and disappearance of these MMCT bands in the visible region have been dealt with in relation to the possible uses of the complexes. (c) 2004 Elsevier B.V. All rights reserved.
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- 2005
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241. Time-Resolved Spectroscopy of the Metal-to-Metal Charge Transfer Excited State in Dinuclear Cyano-Bridged Mixed-Valence Complexes
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Andreas Hauser, Stéphane Pagès, Paul V. Bernhardt, Brendan P. Macpherson, and Eric Vauthey
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Time Factors ,Valence (chemistry) ,Molecular Conformation ,Analytical chemistry ,Infrared spectroscopy ,Chromophore ,Inorganic Chemistry ,chemistry.chemical_compound ,chemistry ,Metals, Heavy ,Excited state ,ddc:540 ,Nitriles ,Spectroscopy, Fourier Transform Infrared ,Ultrafast laser spectroscopy ,Organometallic Compounds ,Thermodynamics ,Physical chemistry ,Ferricyanide ,Physical and Theoretical Chemistry ,Time-resolved spectroscopy ,Spectroscopy - Abstract
Visible pump-probe spectroscopy has been used to identify and characterize short-lived metal-to-metal charge transfer (MMCT) excited states in a group of cyano-bridged mixed-valence complexes of the formula [LCo(III)NCM(II)(CN)(5)](-), where L is a pentadentate macrocyclic pentaamine (L(14)) or triamine-dithiaether (L(14S)) and M is Fe or Ru. Nanosecond pump-probe spectroscopy on frozen solutions of [L(14)Co(III)NCFe(II)(CN)(5)](-) and [L(14S)Co(III)NCFe(II)(CN)(5)](-) at 11 K enabled the construction of difference transient absorption spectra that featured a rise in absorbance in the region of 350-400 nm consistent with the generation of the ferricyanide chromophore of the photoexcited complex. The MMCT excited state of the Ru analogue [L(14)Co(III)NCRu(II)(CN)(5)](-) was too short-lived to allow its detection. Femtosecond pump-probe spectroscopy on aqueous solutions of [L(14)Co(III)NCFe(II)(CN)(5)](-) and [L(14S)Co(III)NCFe(II)(CN)(5)](-) at room temperature enabled the lifetimes of their Co(II)-Fe(III) MMCT excited states to be determined as 0.8 and 1.3 ps, respectively.
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- 2005
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242. Cyanocobalt(III) complexes of penta- and tetradentate-coordinated macrocyclic hexaamines
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Paul V. Bernhardt and Nathan L. Kilah
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Tetrahydrate ,Ligand ,Trans effect ,Stereochemistry ,chemistry.chemical_element ,General Medicine ,Crystal structure ,General Biochemistry, Genetics and Molecular Biology ,Bond length ,Metal ,Crystallography ,chemistry.chemical_compound ,chemistry ,Diamine ,visual_art ,visual_art.visual_art_medium ,Cobalt - Abstract
The pendent-arm macrocyclic hexaamine trans-6,13-dimethyl-1,4,8,11-tetraazacyclotetradecane-6,13-diamine (L) may coordinate in tetra-, penta- or hexadentate modes, depending on the metal ion and the synthetic procedure. We report here the crystal structures of two pseudo-octahedral cobalt(III) complexes of L, namely sodium trans-cyano(trans-6,13-dimethyl-1,4,8,11-tetraazacyclotetradecane-6,13-diamine)cobalt(III) triperchlorate, Na[Co(CN)(C13H30N6)](ClO4)3 or Na{trans-[CoL(CN)]}(ClO4)3, (I), where L is coordinated as a pentadentate ligand, and trans-dicyano(trans-6,13-dimethyl-1,4,8,11-tetraazacyclotetradecane-6,13-diamine)cobalt(III) trans-dicyano(trans-6,13-dimethyl-1,4,8,11-tetraazacyclotetradecane-6,13-diaminium)cobalt(III) tetraperchlorate tetrahydrate, [Co(CN)2(C14H32N6)][Co(CN)2(C14H30N6)](ClO4)4.4H2O or trans-[CoL(CN)2]trans-[Co(H2L)(CN)2](ClO4)4.4H2O, (II), where the ligand binds in a tetradentate mode, with the remaining coordination sites being filled by C-bound cyano ligands. In (I), the secondary amine Co-N bond lengths lie within the range 1.944 (3)-1.969 (3) A, while the trans influence of the cyano ligand lengthens the Co-N bond length of the coordinated primary amine [Co-N = 1.986 (3) A]. The Co-CN bond length is 1.899 (3) A. The complex cations in (II) are each located on centres of symmetry. The Co-N bond lengths in both cations are somewhat longer than in (I) and span a narrow range [1.972 (3)-1.982 (3) A]. The two independent Co-CN bond lengths are similar [1.918 (4) and 1.926 (4) A] but significantly longer than in the structure of (I), again a consequence of the trans influence of each cyano ligand.
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- 2005
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243. Tuning the Photophysical Behavior of Luminescent Cyclam Derivatives by Cation Binding and Excited State Redox Potential
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Paul V. Bernhardt, Alexandre Fürstenberg, Eric Vauthey, Mark J. Riley, Trevor A. Smith, and Evan G. Moore
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Cation binding ,chemistry.chemical_compound ,Chemistry ,ddc:540 ,Cyclam ,Physical and Theoretical Chemistry ,Chromophore ,Photochemistry ,Lone pair ,Fluorescence ,Redox ,Photon upconversion ,Photoinduced electron transfer - Abstract
The emission from two photoactive 14-membered macrocyclic ligands, 6-((naphthalen-1-ylmethyl)-amino)-trans-6,13-dimethyl-13-amino-1,4,8,11-tetraaza-cyclotetradecane (L1) and 6-((anthracen-9-ylmethyl)-amino)-trans-6,13-dimethyl-13-amino-1,4,8,11-tetraaza-cyclotetradecane (L2) is strongly quenched by a photoinduced electron transfer (PET) mechanism involving amine lone pairs as electron donors. Time-correlated single photon counting (TCSPC), multiplex transient grating (TG), and fluorescence upconversion (FU) measurements were performed to characterize this quenching mechanism. Upon complexation with the redox inactive metal ion, Zn(II), the emission of the ligands is dramatically altered, with a significant increase in the fluorescence quantum yields due to coordination-induced deactivation of the macrocyclic amine lone pair electron donors. For [ZnL2]2+, the substituted exocyclic amine nitrogen, which is not coordinated to the metal ion, does not quench the fluorescence due to an inductive effect of the proximal divalent metal ion that raises the ionization potential. However, for [ZnL1]2+, the naphthalene chromophore is a sufficiently strong excited-state oxidant for PET quenching to occur.
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- 2005
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244. Direct electrochemistry of enzymes from the cytochrome P450 2C family
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Paul V. Bernhardt, Alka Shukla, Deanne J. Mitchell, and Elizabeth M. J. Gillam
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inorganic chemicals ,chemistry.chemical_classification ,medicine.medical_specialty ,Unspecific monooxygenase ,biology ,Stereochemistry ,Cytochrome P450 ,Metabolism ,Ligand (biochemistry) ,Isozyme ,lcsh:Chemistry ,Electron transfer ,Enzyme ,lcsh:Industrial electrochemistry ,lcsh:QD1-999 ,chemistry ,Biochemistry ,Bioelectrochemistry ,Electrochemistry ,biology.protein ,medicine ,lcsh:TP250-261 - Abstract
The human cytochromes P450 are responsible for the clearance of ∼90% of xenobiotics yet comparatively little is known about their electrochemistry. Here we report the first direct electrochemistry of P450s from the 2C subfamily; one of the major groups of enzymes from this family. Specifically, the proteins that we have examined are recombinant human P450s 2C9, 2C18 and 2C19 and reversible FeIII/II couples are seen in the absence of dioxygen. Even in the presence of trace amounts of dioxygen, a pronounced cathodic response is seen which is assigned to catalytic reduction of the bound dioxygen ligand by the ferrous P450. Keywords: Cytochrome P450, Voltammetry, Direct electron transfer
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- 2005
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245. Nitrogen is a requirement for the photochemical induced 3-azabicyclo[3.3.1]nonane skeletal rearrangement!
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Paul V. Bernhardt, Craig M. Williams, and Ralf Heim
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chemistry.chemical_compound ,chemistry ,Stereochemistry ,Organic Chemistry ,Drug Discovery ,chemistry.chemical_element ,Nonane ,Cleavage (embryo) ,Photochemistry ,Biochemistry ,Nitrogen - Abstract
Specific 3-azabicyclo[3.3.1]nonane derivatives undergo skeletal cleavage when subjected to light or Lewis acidic conditions affording novel heterotricycles, which is in stark contrast to 3-oxabicyclo[3.3.1]nonanes.
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- 2005
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246. Investigating direct routes to an advanced intermediate for the synthesis of C-20 diterpene alkaloids
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Lewis N. Mander, Anthony C. Willis, Craig M. Williams, and Paul V. Bernhardt
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Stereochemistry ,Organic Chemistry ,Ring (chemistry) ,Biochemistry ,chemistry.chemical_compound ,chemistry ,Intramolecular force ,Drug Discovery ,Functional group ,Organic chemistry ,Diterpene ,Nonane ,Imide ,Friedel–Crafts reaction ,Derivative (chemistry) - Abstract
Rapid access to the ABCE ring system of the C-20 diterpene alkaloids was achieved by silver (I) promoted intramolecular Friedel-Crafts arylation of a functional group specific 5-bromo-3-azabicyclo[3.3.1]nonane derivative. (c) 2005 Elsevier Ltd. All rights reserved.
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- 2005
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247. Macrocycles and medicine – facile synthesis of a bis(macrocycle) with pendent functionality
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Sujandi Chow, Jee Young Kim, Paul V. Bernhardt, Young Hoon Lee, and Yang Kim
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Perchlorate ,chemistry.chemical_compound ,chemistry ,Stereochemistry ,Ligand ,General Chemical Engineering ,Cyclam ,X-ray crystallography ,Molecule ,General Chemistry ,Crystal structure ,Medicinal chemistry ,Chemical synthesis - Abstract
The crystal structure of the Cu(II) perchlorate complex of a functionalised bis(rnacrocycle) ligand, where the individual macrocycle units are of the cyclam type and adopt the trans-III configuration, is analysed in terms of its possible relationship to those of bis(macrocycle) complexes possessing anti-viral activity. To cite this article: P V Bernhardt et al., C. R. Chimie 8 (2005). (C) 2004 Academie des sciences. Published by Elsevier SAS. All rights reserved.
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- 2005
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248. Diphenyltin(IV) complexes of the 2-quinolinecarboxaldehyde Schiff bases of S-methyl- and S-benzyldithiocarbazate (Hqaldsme and Hqaldsbz): X-ray crystal structures of Hqaldsme and two conformers of its diphenyltin(IV) complex
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Paul V. Bernhardt, Aminul Huq Mirza, Malai Haniti S. A. Hamid, and Mohammad Ali
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Schiff base ,Ligand ,Stereochemistry ,Quinoline ,Crystal structure ,Tautomer ,Inorganic Chemistry ,chemistry.chemical_compound ,2-Formylpyridine ,Crystallography ,Deprotonation ,chemistry ,Octahedral molecular geometry ,Materials Chemistry ,Physical and Theoretical Chemistry - Abstract
New organometallic tin(IV) complexes of the empirical formula Sn(NNS)Ph2Cl (NNS = anionic forms of the 2-quinolinecarboxaldehyde Schiff bases of S-methyl- and S-benzyldithiocarbazate) have been prepared and characterized by IR, electronic, I H NMR and ES mass spectroscopic techniques. The molecular structures of the 2-quinolinecarboxaldehyde Schiff base of S-methyldithiocarbazate (Hqaldsme) and its diphenyltin(IV) complex, Sn(qaldsme)Ph2Cl, have been determined by X-ray diffraction. In the solid state, the ligand remains as the thione tautomer in which the dithiocarbazate chain adopts an E,E configuration and is almost coplanar with the quinoline ring. The Sn(qaldsme)Ph2Cl complex crystallizes in two distinctly different conformationally isomeric forms, each having the same space group but different lattice parameters. X-ray analysis shows that in each polymorph, the tin atom adopts a distorted octahedral geometry with the Schiff base coordinated to it as a uninegatively charged tridentate chelating agent via the quinoline nitrogen atom, the azomethine nitrogen atom and the thiolate sulfur atom. The two phenyl groups occupy axial positions and the chloride ligand occupies the sixth coordination position of the tin atom. The deprotonated ligand adopts an E,E,Z configuration in the complex. (C) 2004 Elsevier Ltd. All rights reserved.
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- 2005
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249. A Numerical Approach to Modeling the Catalytic Voltammetry of Surface-Confined Redox Enzymes
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Michael J. Honeychurch and Paul V. Bernhardt
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Steady state ,Chemistry ,Quantitative Biology::Molecular Networks ,Inorganic chemistry ,Finite difference method ,Surfaces, Coatings and Films ,Enzyme catalysis ,Quantitative Biology::Subcellular Processes ,Nonlinear system ,Electron transfer ,Materials Chemistry ,Physical and Theoretical Chemistry ,Cyclic voltammetry ,Biological system ,Voltammetry ,Sparse matrix - Abstract
A finite difference method for simulating voltammograms of electrochemically driven enzyme catalysis is presented. The method enables any enzyme mechanism to be simulated. The finite difference equations can be represented as a matrix equation containing a nonlinear sparse matrix. This equation has been solved using the software package Mathematica. Our focus is on the use of cyclic voltammetry since this is the most commonly employed electrochemical method used to elucidate mechanisms. The use of cyclic voltammetry to obtain data from systems obeying Michaelis-Menten kinetics is discussed, and we then verify our observations on the Michaelis-Menten system using the finite difference simulation. Finally, we demonstrate how the method can be used to obtain mechanistic information on a real redox enzyme system, the complex bacterial molybdoenzyme xanthine dehydrogenase.
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- 2004
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250. The preparation and characterization of tin(IV) complexes of 2-quinolinecarboxaldehyde Schiff bases of S-methyl- and S-benzyldithiocarbazates and the X-ray crystal and molecular structures of the 2-quinolinecarboxaldehyde Schiff base of S-benzyldithiocarbazate (Hqaldsbz) and its tin(IV) complex [Sn(qaldsbz)I3]
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Mohammad Ali, Fatriah Hj Bujang, Paul V. Bernhardt, Malai Haniti S. A. Hamid, and Aminul Huq Mirza
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chemistry.chemical_classification ,Schiff base ,Stereochemistry ,Ligand ,chemistry.chemical_element ,Tautomer ,Coordination complex ,Inorganic Chemistry ,chemistry.chemical_compound ,Crystallography ,2-Formylpyridine ,Deprotonation ,chemistry ,Octahedral molecular geometry ,Materials Chemistry ,Physical and Theoretical Chemistry ,Tin - Abstract
New tin(IV) complexes of empirical formula, Sn(NNS)I-3 (NNS = anionic forms of the 2-quinolinecarboxaldehyde Schiff bases of S-methyl- and S-benzyldithiocarbazate) have been prepared and characterized by a variety of physico-chemical techniques. In the solid state, the Schiff bases exist as the thione tautomer but in solution and in the presence of tin(IV) iodide they convert to the thiol tautomer and coordinate to the tin atom in their deprotonated thiolate forms. The structures of the free ligand, Hqaldsbz and its triiodotin(IV) complex, [Sn(qaldsbz)I-3] have been determined by X-ray diffraction. The complex, [Sn(qaldsbz)I-3] has a distorted octahedral structure with the Schiff base coordinated to the tin atom as a uninegatively charged tridentate chelating agent via the quinoline nitrogen atom, the azomethine nitrogen atom and the thiolate sulfur atom. The three iodo ligands are coordinated meridionally to the tin atom. The distortion from an ideal octahedral geometry of [Sn(qaldsbz)I-3] is attributed to the restricted bite size of the tridentate Schiff base ligand. (C) 2004 Elsevier Ltd. All rights reserved.
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- 2004
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