2,264 results on '"Identification methods"'
Search Results
202. A case of infective endocarditis caused by 'Neisseria skkuensis'
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Shota Yonetani, Yoshifumi Nishi, Daisuke Kurai, Koji Araki, and Hiroaki Ohnishi
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0301 basic medicine ,Microbiology (medical) ,Identification methods ,biology ,business.industry ,030106 microbiology ,Coccus ,biology.organism_classification ,Oral cavity ,medicine.disease ,Mass spectrometric ,Neisseria skkuensis ,Microbiology ,03 medical and health sciences ,0302 clinical medicine ,Infectious Diseases ,Infective endocarditis ,16s rrna gene sequencing ,medicine ,Pharmacology (medical) ,030212 general & internal medicine ,Neisseria ,business - Abstract
"Neisseria skkuensis" is a gram-negative coccus that is endemic in the human oral cavity, with only few reports of infection in humans. Herein, we report a case of a male patient in his sixties presenting with infective endocarditis (IE) caused by "N. skkuensis". To our knowledge, this is the second case of IE confirmed using 16S rRNA gene to have been caused by "N. skkuensis". The accurate diagnosis of rare or difficult-to-identify pathogens is a major challenge for clinical microbiological laboratories. Although Neisseria spp. are common in the oral cavity and are often seen in routine tests, identification of their biochemical properties and mass spectrometric analysis are difficult. In this case report, we describe the accurate identification of "N. skkuensis" by 16S rRNA gene sequencing analysis compared to other identification methods. Further cases of "N. skkuensis" are needed to fully evaluate the clinical approach of this detection method.
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- 2021
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203. Robinsoniella peoriensis, originally isolated from swine manure, and early periprosthetic hip infection: Case report and review of the literature.
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Rieber, Heime, Frontzek, Andre, Bell, Andreas, and Frommelt, Lars
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ANIMAL waste , *LABORATORY swine , *PERIPROSTHETIC fractures , *ANAEROBIC bacteria , *VETERINARY medicine , *ANTI-infective agents - Abstract
We report on the first case of a periprosthetic joint infection with the anaerobic spore-forming Gram-positive rod Robinsoniella peoriensis as the causative agent. The bacterium was first isolated from a swine manure storage pit and has so far rarely been associated with human infections. [ABSTRACT FROM AUTHOR]
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- 2016
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204. Methodology for identification of potential threats and ship operations as a part of ship security assessment.
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Prill, Katarzyna and Szymczak, Marcin
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SHIP security measures , *NAVIGATION -- Safety measures , *SECURITY personnel , *SHIPS , *DATA analysis , *MANAGEMENT - Abstract
This paper presents the development of a methodology for the identification of possible intentional threats and key ship operations that may be significant for a ship's security assessment, carried out by a Company Security Officer. The applicable international and domestic legal regulations regarding ship security systems are here analysed. Key factors and parameters that may provide support for the proper identification of realistic threats are also identified, giving practical relevance to this paper. The information reported here may be of support to those responsible for the development and revision of a ship's security assessment as it addresses an important part of the maintenance of navigational safety of ship operations under the provisions of the International Ship and Port Facility Security Code - ISPS Code. [ABSTRACT FROM AUTHOR]
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- 2016
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205. Continuous-time identification of periodically parameter-varying state space models.
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Goos, Jan and Pintelon, Rik
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MULTIVARIATE analysis , *DIFFERENTIAL equations , *ALGORITHMS , *LINEAR systems , *SPARSE graphs - Abstract
This paper presents a new frequency domain identification technique to estimate multivariate Linear Parameter-Varying (LPV) continuous-time state space models, where a periodic variation of the parameters is assumed or imposed. The main goal is to obtain an LPV state space model suitable for control, from a single parameter-varying experiment. Although most LPV controller synthesis tools require continuous time state space models, the identification of such models is new. The proposed identification method designs a periodic input signal, taking the periodicity of the parameter variation into account. We show that when an integer number of periods is observed for both the input and the scheduling, the state space model representation has a specific, sparse structure in the frequency domain, which is exploited to speed up the estimation procedure. A weighted non-linear least squares algorithm then minimizes the output error. Two initialization methods are explored to generate starting values. The first approach uses a Linear Time-Invariant (LTI) approximation. The second estimates a Linear Time-Variant (LTV) input–output differential equation, from which a corresponding state space realization is computed. [ABSTRACT FROM AUTHOR]
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- 2016
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206. Network motif-based method for identifying coronary artery disease.
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YIN LI, YAN CONG, and YUN ZHAO
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CORONARY disease , *GENE expression , *DNA microarrays , *TRANSCRIPTION factors , *CONTROL groups - Abstract
The present study aimed to develop a more efficient method for identifying coronary artery disease (CAD) than the conventional method using individual differentially expressed genes (DEGs). GSE42148 gene microarray data were downloaded, preprocessed and screened for DEGs. Additionally, based on transcriptional regulation data obtained from ENCODE database and protein-protein interaction data from the HPRD, the common genes were downloaded and compared with genes annotated from gene microarrays to screen additional common genes in order to construct an integrated regulation network. FANMOD was then used to detect significant three-gene network motifs. Subsequently, GlobalAncova was used to screen differential three-gene network motifs between the CAD group and the normal control data from GSE42148. Genes involved in the differential network motifs were then subjected to functional annotation and pathway enrichment analysis. Finally, clustering analysis of the CAD and control samples was performed based on individual DEGs and the top 20 network motifs identified. In total, 9,008 significant three-node network motifs were detected from the integrated regulation network; these were categorized into 22 interaction modes, each containing a minimum of one transcription factor. Subsequently, 1,132 differential network motifs involving 697 genes were screened between the CAD and control group. The 697 genes were enriched in 154 gene ontology terms, including 119 biological processes, and 14 KEGG pathways. Identifying patients with CAD based on the top 20 network motifs provided increased accuracy compared with the conventional method based on individual DEGs. The results of the present study indicate that the network motif-based method is more efficient and accurate for identifying CAD patients than the conventional method based on individual DEGs. [ABSTRACT FROM AUTHOR]
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- 2016
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207. Talent’s network way of thinking.
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Gyarmathy, Éva
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GIFTED persons ,THOUGHT & thinking ,STUDENT engagement - Abstract
In the 21st century support for gifted education and talent, as are many other earlier values and solutions, is being reassessed. In the age of rapidly changing values, keeping provision up-to-date is achieved through the continual rethinking, reviewing and challenging the concept of giftedness and talent. The perception and our understanding of what is described as ‘talent’ is a social product; that is, it is culture-dependent, but it does have some basic characteristics which are universal and which help us understand what is meant by the term ‘talent’ both in the past and the present. However, talent is not a homogeneous concept, even though it is often depicted as such in talent support, scientific studies of talent and talent models alike. Talents with different development histories have different needs and the environment necessary for development can differ substantially by age and talent forms. Consequently, provision should not be homogeneous, either. In the present study, through a rethinking of the talent concept, I propose an approach which favours network-based functioning, an approach better suited for use in today’s culture. [ABSTRACT FROM AUTHOR]
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- 2016
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208. Antibiotic resistance mechanisms of Myroides sp.
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Hu, Shao-hua, Yuan, Shu-xing, Qu, Hai, Jiang, Tao, Zhou, Ya-jun, Wang, Ming-xi, and Ming, De-song
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Copyright of Journal of Zhejiang University: Science B is the property of Springer Nature and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
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- 2016
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209. Comparison of Vitek Matrix-assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry Versus Conventional Methods in Candida Identification.
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Keçeli, Sema, Dündar, Devrim, and Tamer, Gülden
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Candida species are generally identified by conventional methods such as germ tube or morphological appearance on corn meal agar, biochemical methods using API kits and molecular biological methods. Alternative to these methods, rapid and accurate identification methods of microorganisms called matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDİ-TOF MS) has recently been described. In this study, Candida identification results by API Candida kit, API 20C AUX kit and identifications on corn meal agar (CMA) are compared with the results obtained on Vitek-MS. All results were confirmed by sequencing internal transcribed spacer (ITS) regions of rDNA. Totally, 97 Candida strains were identified by germ tube test, CMA, API and Vitek-MS. Vitek-MS results were compatible with 74.2 % of API 20C AUX and 81.4 % of CMA results. The difference between the results of API Candida and API 20C AUX was detected. The ratio of discrepancy between Vitek-MS and API 20C AUX was 25.8 %. Candida species mostly identified as C. famata or C. tropicalis by and not compatible with API kits were identified as C. albicans by Vitek-MS. Sixteen Candida species having discrepant results with Vitek-MS, API or CMA were randomly chosen, and ITS sequence analysis was performed. The results of sequencing were compatible 56.2 % with API 20C AUX, 50 % with CMA and 93.7 % with Vitek-MS. When compared with conventional identification methods, MS results are more reliable and rapid for Candida identification. MS system may be used as routine identification method in clinical microbiology laboratories. [ABSTRACT FROM AUTHOR]
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- 2016
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210. Genetic Diversity of Ranaviruses in Amphibians in China: 10 New Isolates and Their Implications.
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Yun-Qi Zhu and Xiao-Long Wang
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Ranaviruses can cause amphibian mass deaths and contribute to global ecological instability. In this study, 10 ranavirus strains isolated from Rana dybowskii and Rana amurensis Boulenger across three geographic locations in Northeastern China were studied through PCR. cloning, sequencing, restriction endonuclease analysis (REA), and phylogenetic analysis. Although the isolates were highly homologous tofrog virus 3, genetic differences were observed among Northeastern Chinese isolates, as well as between these isolates and those from different regions worldwide. Different ratios of substitutions and/or missense mutations were observed through REA at several loci of each isolate, which resulted in shortening or lengthening of the restriction-enzyme cutting sites of Fnu4H I. The cutting sites of other endonucleases (Hinc II, Acc I, and PflM 1) were not affected by the existing mutations. Changes in the REA spectra of the Northeastern Chinese isolates were observed, thereby indicating the high level of genetic diversity of ranaviruses in this region. Nevertheless, further research must be performed over a broader area to confirm the diversity of ranaviruses. This study recommends the inclusion of ranaviruses in pathogen surveillance worldwide. [ABSTRACT FROM AUTHOR]
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- 2016
211. Pigments—the palette of organic colourants in wall paintings
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Maurizio Aceto
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Identification methods ,Archeology ,Painting ,Palette (painting) ,Anthropology ,media_common.quotation_subject ,Art history ,Polychrome ,Pottery ,Art ,media_common - Abstract
The present contribution deals with the use of organic colourants in wall paintings, polychrome pottery and painted stone artworks, i.e. painted artworks on inorganic supports. The term organic colourants is referred to the chemical nature of these compounds but not to the way of application; therefore, organic colourants can be dyes, lakes or pigments. The use of organic colourants in wall paintings has been given little attention in the past, perhaps on the assumption that they were rarely used by ancient artists. Recent diagnostic studies, however, brought evidence that their use was not fragmentary; on the contrary, there seems to be continuity in the centuries, at least with regard to the most widely used such as madder, Tyrian purple and indigo. Sources, alteration phenomena, identification methods and analytical evidence is given for the main organic colourants with concern to red, yellow, green, purple and blue hues. Drawbacks and issues are discussed with concern to the identification techniques.
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- 2021
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212. Application of Parallel-Sequential Identification Algorithms in Diagnostic Tasks
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Vladimir O. Zehcer and Andrey A. Kostoglotov
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Identification methods ,Identification (information) ,Automatic control ,Artificial neural network ,Computer simulation ,Computer science ,Reliability (computer networking) ,Information processing ,Parametric identification ,Algorithm - Abstract
Ensuring the reliability of automatic control systems is directly related to solving diagnostic problems that require the identification of current parameter values in the presence of uncertain impacts or changing operating conditions. This determines the high importance of an effective solution to the problem of parametric identification. Currently, there are many alternatives for solving identification problems, one of which is the joint use of classical identification methods and artificial neural networks. The article proposes a method of systems’ synthesis for identifying the dynamic objects’ parameters based on the complex use of artificial neural networks and recurrent algorithms, which is a parallel-sequential information processing procedure. The efficiency of the recurrent identification algorithm using a neural network is shown. The results of the numerical simulation are presented.
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- 2021
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213. Simple Matching Using QIIME 2 and RDP Reveals Misidentified Sequences and an Underrepresentation of Fungi in Reference Datasets
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David Roy Smith, Lauren E. Eldred, and R. Greg Thorn
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Identification methods ,Matching (statistics) ,Phylogenetic tree ,business.industry ,Computer science ,Basidiomycota ,Pattern recognition ,QH426-470 ,Identification (information) ,Simple (abstract algebra) ,Perspective ,metabarcoding ,Genetics ,Molecular Medicine ,misidentification ,Artificial intelligence ,Evolutionary information ,SILVA ,business ,Classifier (UML) ,Genetics (clinical) ,sequence identification - Abstract
Simple nucleotide matching identification methods are not as accurate as once thought at identifying environmental fungal sequences. This is largely because of incorrect naming and the underrepresentation of various fungal groups in reference datasets, but it is also potentially a reflection of the identification software being used. Here, we explore these issues by examining an environmental metabarcoding dataset of partial large subunit rRNA sequences of Basidiomycota and basal fungi. We employed the simple matching method using the QIIME 2 classifier and the RDP Classifier in conjunction with the latest releases of the SILVA (138.1, 2020) and RDP (11, 2014) reference datasets and then compared the results with a manual phylogenetic binning approach. Of the 71 query sequences tested, 21% and 42% were misidentified using QIIME 2 and the RDP Classifier, respectively. Of these simple matching misidentifications, more than half resulted from the underrepresentation of groups of fungi in the SILVA and RDP reference datasets. More comprehensive reference datasets with fewer misidentified sequences will increase the accuracy of simple matching identifications. However, we argue that the phylogenetic binning approach is a better alternative to simple matching since, in addition to better accuracy, it provides evolutionary information about query sequences.
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- 2021
214. Indirect Measurement of Loading Forces with High-Speed Camera
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Kajetan Dziedziech, Krzysztof Mendrok, Ziemowit Dworakowski, and Krzysztof Holak
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Identification methods ,High-speed camera ,Computer science ,Chemical technology ,Communication ,Monitoring system ,load monitoring ,TP1-1185 ,Biochemistry ,Piezoelectricity ,Atomic and Molecular Physics, and Optics ,Force sensor ,Automotive engineering ,Analytical Chemistry ,Multiple sensors ,Structural health monitoring ,high-speed camera ,Electrical and Electronic Engineering ,load identification ,vision measurements ,Instrumentation ,Strain gauge ,Mechanical Phenomena ,Monitoring, Physiologic - Abstract
In the last few decades, there has been a significant increase in interest in developing, constructing, and using structural health monitoring (SHM) systems. The classic monitoring system should, by definition, have, in addition to the diagnostic module, a module responsible for monitoring loads. These loads can be measured with piezoelectric force sensors or indirectly with strain gauges such as resistance strain gauges or FBG sensors. However, this is not always feasible due to how the force is applied or because sensors cannot be mounted. Therefore, methods for identifying excitation forces based on response measurements are often used. This approach is usually cheaper and easier to implement from the measurement side. However, in this approach, it is necessary to use a network of response sensors, whose installation and wiring can cause technological difficulties and modify the results for slender constructions. Moreover, many load identification methods require the use of multiple sensors to identify a single force history. Increasing the number of sensors recording responses improves the numerical conditioning of the method. The proposed article presents the use of contactless measurements carried out with the help of a high-speed camera to identify the forces exiting the object.
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- 2021
215. A large-sample crisis? Exaggerated false positives by popular differential expression methods
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Wei Li, Xinzhou Ge, Fanglue Peng, Jingyi Jessica Li, and Yumei Li
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Identification methods ,Permutation ,Wilcoxon signed-rank test ,Statistics ,Nonparametric statistics ,False positive paradox ,Differential expression ,Parametric statistics ,Mathematics ,Large sample - Abstract
We report a surprising phenomenon about identifying differentially expressed genes (DEGs) from population-level RNA-seq data: two popular bioinformatics methods, DESeq2 and edgeR, have unexpectedly high false discovery rates (FDRs). Via permutation analysis on an immunotherapy RNA-seq dataset, we observed that DESeq2 and edgeR identified even more DEGs after samples’ condition labels were randomly permuted. Motivated by this, we evaluated six DEG identification methods (DESeq2, edgeR, limma-voom, NOISeq, dearseq, and the Wilcoxon rank-sum test) on population-level RNA-seq datasets. We found that the FDR control was often failed by the three popular parametric methods—DESeq2, edgeR, and limma-voom— and the new non-parametric method dearseq. In particular, the actual FDRs of DESeq2 and edgeR sometimes exceeded 20% when the target FDR threshold was only 5%. Although NOISeq, a non-parametric method used by GTEx, controlled the FDR better than the other four methods did, its power was much lower than that of the Wilcoxon rank-sum test, a classic nonparametric test that consistently controlled the FDR and achieved good power in our evaluation. Based on these results, for population-level RNA-seq studies, we recommend the Wilcoxon rank-sum test.
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- 2021
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216. Development and Validation of a Species-specific PCR Method for the Identification of Ginseng Species Using Orthogonal Approaches
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Zheng Quan, Zhengfei Lu, Ning Zhang, Sara M. Handy, Nandakumara D. Sarma, Gabriel I. Giancaspro, Michael Ambrose, and Qun Xu
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Pharmacology ,Identification methods ,Plants, Medicinal ,Computer science ,Plant Extracts ,Organic Chemistry ,Pharmaceutical Science ,Panax ,Computational biology ,Polymerase Chain Reaction ,Analytical Chemistry ,Ginseng ,Complementary and alternative medicine ,Species Specificity ,Drug Discovery ,Molecular Medicine ,Identification (biology) ,Pcr method - Abstract
When testing botanical ingredients of herbal medicines and dietary supplements, the complexity of botanical matrixes often requires the use of orthogonal methods to establish identification procedures suitable for quality control purposes. Genomic-based botanical identification methods are evolving and emerging as useful quality control tools to complement traditional morphological and chemical identification methods. Species-specific polymerase chain reaction methods are being evaluated for botanical quality control and as a cost-effective approach to identify and discriminate between closely related botanical species. This paper describes orthogonal identification of Panax ginseng, P. quinquefolius, and P. notoginseng materials in commerce as an example of the development and validation of a set of species-specific polymerase chain reaction methods to establish botanical identity in ginseng roots. This work also explored the possibility of extending the application of species-specific polymerase chain reaction methods to provide species identity information for processed materials, such as steamed roots and hydroalcoholic extracts, and showed success with this approach. Finally, the paper provides recommendations for an out-of-specification investigation of samples that may pass some of the orthogonal tests and fail others.
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- 2021
217. A Worked-out Example of Surrogate-based Bayesian Parameter and Field Identification Methods
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Claudia Zoccarato, Noemi Friedman, Hermann G. Matthies, and Elmar Zander
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Identification methods ,Field (physics) ,Computer science ,Bayesian probability ,Data mining ,computer.software_genre ,computer - Published
- 2021
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218. COVID-19: clinical presentation and detection methods
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Sunita Minz, Manju Rawat Singh, Deependra Singh, Krishna Yadav, Ajazuddin, Madhulika Pradhan, Amit Alexander, Kamal Shah, and Nagendra Singh Chauhan
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Identification methods ,medicine.medical_specialty ,Coronavirus disease 2019 (COVID-19) ,Computer science ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,Clinical Biochemistry ,Immunology ,Enzyme-Linked Immunosorbent Assay ,Sensitivity and Specificity ,COVID-19 Testing ,medicine ,Humans ,Immunology and Allergy ,Serologic Tests ,Medical physics ,Reverse Transcriptase Polymerase Chain Reaction ,SARS-CoV-2 ,Viral culture ,Serological assay ,COVID-19 ,Gold standard (test) ,Medical Laboratory Technology ,Identification (information) ,COVID-19 Nucleic Acid Testing ,RNA, Viral ,Radiography, Thoracic ,Tomography, X-Ray Computed ,Viral load - Abstract
The unending outburst of COVID-19 has reinforced the necessity of SARS-CoV-2 identification approaches for the prevention of infection transmission and the proper care of severe and critical patients. As there is no cure, a prompt and reliable diagnosis of SARS-CoV2 is vital to counter the spread and to provide adequate care and treatment for the infection. Currently, RT-PCR is a gold standard detection method for the qualitative and quantitative detection of viral nucleic acids. Besides, enzyme-linked immunosorbent assay is also a primarily used method for qualitative estimation of viral load. However, almost all the detection methods have their pros and cons in terms of specificity, accuracy, sensitivity, cost, time consumption, the need for sophisticated laboratories, and the requirement of skilled technical experts to carry out the detection tests. Thus, it is suggested to integrate different techniques to enhance the detection efficiency and accurateness for SARS-CoV2. This review focuses on preliminary, pre-confirmatory, and confirmatory methods of detection such as imaging techniques (chest-X-ray and chest- computed tomography), nucleic acid detection methods, serological assay methods, and viral culture and identification methods that are currently being employed to detect the presence of SARS-CoV-2 infection along with recent detection method and applicability for COVID-19.
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- 2021
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219. Direct Detection of Streptococcus suis from Cerebrospinal Fluid, Positive Hemoculture, and Simultaneous Differentiation of Serotypes 1, 1/2, 2, and 14 within Single Reaction
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Sorasak Intorasoot, Ingyin Shun Lae Thu, Usanee Anukool, Chayada Sitthidet Tharinjaroen, Khajornsak Tragoolpua, Phadungkiat Khamnoi, and Anusak Kerdsin
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Microbiology (medical) ,Identification methods ,Serotype ,serotype 1 ,Streptococcus suis ,Point-of-care testing ,serotype 2 ,Article ,Cerebrospinal fluid ,serotype 1/2 ,Multiplex polymerase chain reaction ,medicine ,Immunology and Allergy ,Molecular Biology ,serotype 14 ,General Immunology and Microbiology ,biology ,multiplex PCR ,biology.organism_classification ,medicine.disease ,Virology ,Rapid disease progression ,serotyping ,Infectious Diseases ,Medicine ,direct detection ,Meningitis - Abstract
Streptococcus suis is an emerging zoonotic bacterium causing septicemia and meningitis in humans. Due to rapid disease progression, high mortality rate, and many underdiagnosed cases by time-consuming routine identification methods, alternative diagnostic testing is essential. Among 29 broadly accepted S. suis serotypes, serotypes 2 and 14 are high prevalent, however, many PCR assays showed an inability to differentiate serotype 2 from 1/2, and 1 from 14. In this study, we developed and validated a new multiplex PCR assay that facilitates the identification of only the 29 true serotypes of S. suis and simultaneously differentiates serotypes 1, 1/2, 2, and 14 within a single reaction. Importantly, the multiplex PCR could detect S. suis directly from positive hemocultures and CSF. The results revealed high sensitivity, specificity, and 100% accuracy with almost perfect agreement (κ = 1.0) compared to culture and serotyping methods. Direct detection enables a decrease in overall diagnosis time, rapid and efficient treatment, reduced fatality rates, and proficient disease control. This multiplex PCR offers a rapid, easy, and cost-effective method that can be applied in a routine laboratory. Furthermore, it is promising for developing point-of-care testing (POCT) for S. suis detection in the future.
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- 2021
220. Streamflow drought: implication of drought definitions and its application for drought forecasting
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Sutanto, Samuel, van Lanen, Henny A.J., Sub Atmospheric physics and chemistry, and Marine and Atmospheric Research
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Identification methods ,Technology ,010504 meteorology & atmospheric sciences ,0207 environmental engineering ,02 engineering and technology ,Hydrology and Quantitative Water Management ,Environmental technology. Sanitary engineering ,01 natural sciences ,Streamflow ,Geography. Anthropology. Recreation ,medicine ,Earth and Planetary Sciences (miscellaneous) ,Life Science ,GE1-350 ,Hydrometeorology ,020701 environmental engineering ,TD1-1066 ,0105 earth and related environmental sciences ,Confusion ,Water Science and Technology ,WIMEK ,Environmental sciences ,Climatology ,Environmental science ,medicine.symptom ,Hydrologie en Kwantitatief Waterbeheer - Abstract
Streamflow drought forecasting is a key element of contemporary drought early warning systems (DEWS). The term streamflow drought forecasting (not streamflow forecasting), however, has created confusion within the scientific hydrometeorological community as well as in operational weather and water management services. Streamflow drought forecasting requires an additional step, which is the application of a drought identification method to the forecasted streamflow time series. The way streamflow drought is identified is the main reason for this misperception. The purpose of this study, therefore, is to provide a comprehensive overview of the differences between different drought identification approaches to identify droughts in European rivers, including an analysis of both historical drought and implications for forecasting. Streamflow data were obtained from the LISFLOOD hydrological model forced with gridded meteorological observations (known as LISFLOOD-Simulation Forced with Observed, SFO). The same model fed with seasonal meteorological forecasts of the European Centre for Medium-Range Weather Forecasts system 5 (ECMWF SEAS 5) was used to obtain the forecasted streamflow. Streamflow droughts were analyzed using the daily and monthly variable threshold methods (VTD and VTM, respectively), the daily and monthly fixed threshold methods (FTD and FTM, respectively), and the Standardized Streamflow Index (SSI). Our results clearly show that streamflow droughts derived from different approaches deviate from each other in their characteristics, which also vary in different climate regions across Europe. The daily threshold methods (FTD and VTD) identify 25 %–50 % more drought events than the monthly threshold methods (FTM and VTM), and accordingly the average drought duration is longer for the monthly than for the daily threshold methods. The FTD and FTM, in general, identify drought occurrences earlier in the year than the VTD and VTM. In addition, the droughts obtained with the VTM and FTM approaches also have higher drought deficit volumes (about 25 %–30 %) than the VTD and FTD approaches. Overall, the characteristics of SSI-1 drought are close to what is being identified by the VTM. The different outcome obtained with the drought identification methods illustrated with the historical analysis is also found in drought forecasting, as documented for the 2003 drought across Europe and for the Rhine River specifically. In the end, there is no unique hydrological drought definition (identification method) that fits all purposes, and hence developers of DEWS and end-users should clearly agree in the co-design phase upon a sharp definition of which type of streamflow drought is required to be forecasted for a specific application.
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- 2021
221. Photovoltaic Faults: A comparative overview of detection and identification methods
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Dimitrios Karolidis, Maria Samarakou, Stylianos Voutsinas, and Ioannis Voyiatzis
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Identification methods ,Computer science ,media_common.quotation_subject ,Photovoltaic system ,Quality (business) ,Fault detection and identification ,Fault (power engineering) ,Fault detection and isolation ,Energy (signal processing) ,media_common ,Reliability engineering - Abstract
During the last decade, exponential growth in energy production by Photovoltaic systems (PVS) has been observed. Although very promising concerning energy production, PVS are often prone to faults that arise either due to environmental conditions or to the quality of materials used for their manufacturing and handling during installation. If these faults are left untreated, a risk arises both to the operation of the system itself (risk of destruction) and to its very ability to produce energy reliably. This paper discusses methods for fault detection and identification on the DC side of the photovoltaic systems. The methods are studied for their ability to identify various fault types as well as their complexity and limitations.
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- 2021
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222. Restoration of Motion Blurred Image by Modified DeblurGAN for Enhancing the Accuracies of Finger-Vein Recognition
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Kang Ryoung Park, Seung Gu Kim, Jiho Choi, Muhammad Owais, and Jin Seong Hong
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Identification methods ,Biometry ,Biometrics ,genetic structures ,Computer science ,TP1-1185 ,02 engineering and technology ,01 natural sciences ,Biochemistry ,Finger vein recognition ,Motion (physics) ,Article ,Analytical Chemistry ,Image (mathematics) ,law.invention ,Veins ,Fingers ,Motion ,law ,0202 electrical engineering, electronic engineering, information engineering ,modified DeblurGAN ,Humans ,Computer vision ,Electrical and Electronic Engineering ,Instrumentation ,integumentary system ,business.industry ,Chemical technology ,010401 analytical chemistry ,Motion blur ,Atomic and Molecular Physics, and Optics ,eye diseases ,0104 chemical sciences ,Lens (optics) ,Finger-vein recognition ,motion blur image restoration ,Hong Kong ,020201 artificial intelligence & image processing ,Artificial intelligence ,sense organs ,Focus (optics) ,business ,CNN - Abstract
Among many available biometrics identification methods, finger-vein recognition has an advantage that is difficult to counterfeit, as finger veins are located under the skin, and high user convenience as a non-invasive image capturing device is used for recognition. However, blurring can occur when acquiring finger-vein images, and such blur can be mainly categorized into three types. First, skin scattering blur due to light scattering in the skin layer, second, optical blur occurs due to lens focus mismatching, and third, motion blur exists due to finger movements. Blurred images generated in these kinds of blur can significantly reduce finger-vein recognition performance. Therefore, restoration of blurred finger-vein images is necessary. Most of the previous studies have addressed the restoration method of skin scattering blurred images and some of the studies have addressed the restoration method of optically blurred images. However, there has been no research on restoration methods of motion blurred finger-vein images that can occur in actual environments. To address this problem, this study proposes a new method for improving the finger-vein recognition performance by restoring motion blurred finger-vein images using a modified deblur generative adversarial network (modified DeblurGAN). Based on an experiment conducted using two open databases, the Shandong University homologous multi-modal traits (SDUMLA-HMT) finger-vein database and Hong Kong Polytechnic University finger-image database version 1, the proposed method demonstrates outstanding performance that is better than those obtained using state-of-the-art methods.
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- 2021
223. Carbon Dots as an Emergent Class of Antimicrobial Agents
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M. Carmen Galan, Mattia Ghirardello, Javier Ramos-Soriano, European Research Council, Ghirardello, Mattia, Ramos-Soriano, Javier, Galán, M. Carmen, Ghirardello, Mattia [0000-0002-2855-4801], Ramos-Soriano, Javier [0000-0002-3054-0679], and Galán, M. Carmen [0000-0001-7307-2871]
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Identification methods ,General Chemical Engineering ,Wound healing ,Nanotechnology ,Context (language use) ,wound healing ,antimicrobial agents ,02 engineering and technology ,Review ,Bacterial sensing ,010402 general chemistry ,01 natural sciences ,Antibiotic prescribing ,biofilm ,Antibiotic resistance ,carbon dots ,Carbon dots ,General Materials Science ,QD1-999 ,Low toxicity ,Chemistry ,bacterial sensing ,Antimicrobial agents ,021001 nanoscience & nanotechnology ,Antimicrobial ,0104 chemical sciences ,CDs composites ,Antibacterial ,Multiple drug resistance ,antibacterial ,Biofilms ,Drug delivery ,drug delivery ,0210 nano-technology - Abstract
Antimicrobial resistance is a recognized global challenge. Tools for bacterial detection can combat antimicrobial resistance by facilitating evidence-based antibiotic prescribing, thus avoiding their overprescription, which contributes to the spread of resistance. Unfortunately, traditional culture-based identification methods take at least a day, while emerging alternatives are limited by high cost and a requirement for skilled operators. Moreover, photodynamic inactivation of bacteria promoted by photosensitisers could be considered as one of the most promising strategies in the fight against multidrug resistance pathogens. In this context, carbon dots (CDs) have been identified as a promising class of photosensitiser nanomaterials for the specific detection and inactivation of different bacterial species. CDs possess exceptional and tuneable chemical and photoelectric properties that make them excellent candidates for antibacterial theranostic applications, such as great chemical stability, high water solubility, low toxicity and excellent biocompatibility. In this review, we will summarize the most recent advances on the use of CDs as antimicrobial agents, including the most commonly used methodologies for CD and CD/composites syntheses and their antibacterial properties in both in vitro and in vivo models developed in the last 3 years.
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- 2021
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224. Trends in methicillin-resistant Staphylococcus aureus bloodstream infections using statewide population-based surveillance and hospital discharge data, Connecticut, 2010–2018
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Kelly M Hatfield, Runa H Gokhale, Isaac See, Ashley N Rose, Paula Clogher, and Susan Petit
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Methicillin-Resistant Staphylococcus aureus ,Microbiology (medical) ,Identification methods ,Staphylococcus aureus ,medicine.medical_specialty ,Epidemiology ,Bacteremia ,Population based ,030501 epidemiology ,medicine.disease_cause ,Article ,03 medical and health sciences ,0302 clinical medicine ,Hospital discharge ,Humans ,Medicine ,030212 general & internal medicine ,Patient discharge ,Cross Infection ,business.industry ,Staphylococcal Infections ,biochemical phenomena, metabolism, and nutrition ,bacterial infections and mycoses ,Methicillin-resistant Staphylococcus aureus ,Hospitals ,Patient Discharge ,Connecticut ,Infectious Diseases ,Emergency medicine ,0305 other medical science ,business - Abstract
We compared methicillin-resistant Staphylococcus aureus (MRSA) bloodstream infections (BSIs) captured by culture-based surveillance and MRSA septicemia hospitalizations captured by administrative coding using statewide hospital discharge data in Connecticut from 2010 to 2018. Observed discrepancies between identification methods suggest administrative coding is inappropriate for assessing trends in MRSA BSIs.
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- 2020
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225. Subspace System Identification of the Kalman Filter
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David Di Ruscio
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Identification methods ,Subspace methods Stochastic systems ,Sampled data systems ,Electronic computers. Computer science ,QA75.5-76.95 - Abstract
Some proofs concerning a subspace identification algorithm are presented. It is proved that the Kalman filter gain and the noise innovations process can be identified directly from known input and output data without explicitly solving the Riccati equation. Furthermore, it is in general and for colored inputs, proved that the subspace identification of the states only is possible if the deterministic part of the system is known or identified beforehand. However, if the inputs are white, then, it is proved that the states can be identified directly. Some alternative projection matrices which can be used to compute the extended observability matrix directly from the data are presented. Furthermore, an efficient method for computing the deterministic part of the system is presented. The closed loop subspace identification problem is also addressed and it is shown that this problem is solved and unbiased estimates are obtained by simply including a filter in the feedback. Furthermore, an algorithm for consistent closed loop subspace estimation is presented. This algorithm is using the controller parameters in order to overcome the bias problem.
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- 2003
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226. New Methodology for Inertial Identification of Low Mobility Mechanisms Considering Dynamic Contribution
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L. A. M. Calderón and C. A. R. Piedrahita
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Identification methods ,0209 industrial biotechnology ,Inertial frame of reference ,Computer science ,Mechanical Engineering ,CAD ,02 engineering and technology ,Low mobility ,Mechanical system ,Identification (information) ,020303 mechanical engineering & transports ,020901 industrial engineering & automation ,0203 mechanical engineering ,Control theory ,Automotive Engineering ,Suspension (vehicle) - Abstract
Knowledge of dynamic parameters of mechanical systems is required in different applications, particularly in the simulation and control problems. In this paper, the standard identification methods are discussed and a new methodology for identification of inertial parameters is raised when the closed chain has low mobility. The methodology includes formulating a symbolic model based on the transfer of inertial properties and a reduction using dynamic contribution indices based on CAD approximations. The new method is applied to the front suspension of an electrical vehicle. After applying the procedure, a model with few parameters that allows accurately reproducing the dynamic behaviour of the system is obtained. A novel methodology has been developed that allows the identification of dynamic parameters in low mobility mechanical systems.
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- 2019
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227. Clostridium septicum aortitis: A kiss of the devil
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Igor Laskowski, Joshua Goldberg, Purva Ranchal, Rahul Gupta, Marc Y. El Khoury, Adam Ferin, and Ramin Malekan
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Pulmonary and Respiratory Medicine ,Identification methods ,medicine.medical_specialty ,biology ,business.industry ,030204 cardiovascular system & hematology ,biology.organism_classification ,medicine.disease ,Malignancy ,Occult ,Clostridium septicum ,03 medical and health sciences ,Aortic aneurysm ,0302 clinical medicine ,030228 respiratory system ,Internal medicine ,Bacteremia ,medicine ,Lethal infection ,Surgery ,Cardiology and Cardiovascular Medicine ,business ,Aortitis - Abstract
Background Clostridium septicum aortitis is a lethal infection. C. septicum has a strong association with an underlying malignancy, most commonly in the colon. Aim Early identification methods and management strategies of C. Septicum infection. Materials and methods We present a 64-year-old man with aortic aneurysm and C. septicum bacteremia with unknown malignancy who passed away on the fourth day of hospitalization despite emergent endovascular intervention. Computed tomography showed periaortic gas which is the hallmark of infection. Discussion This case report highlights the need of prompt surgical treatment and its different modalities along with the early use of appropriate antibiotics due to the rapid spread of infection associated with high fatality. The authors also discuss the association of C. septicum aortitis with underlying occult malignancies. Conclusion Delay in identification and treatment of C. Septicum is associated with very high mortality rates.
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- 2019
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228. An evidence-based framework for identifying technologies of no or low-added value (NLVT)
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María Eugenia Esandi, Nora Ibargoyen-Roteta, Brian Godman, and Iñaki Gutiérrez-Ibarluzea
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Budgets ,Identification methods ,Comparative Effectiveness Research ,Technology Assessment, Biomedical ,Evidence-based practice ,Process (engineering) ,Computer science ,Medical Overuse ,Environment ,03 medical and health sciences ,0302 clinical medicine ,Added value ,Disinvestment ,Humans ,030212 general & internal medicine ,Decision Making, Organizational ,030503 health policy & services ,Health Policy ,Health technology ,Data science ,Identification (information) ,Systematic review ,Patient Satisfaction ,Evidence-Based Practice ,Costs and Cost Analysis ,0305 other medical science - Abstract
ObjectiveTo synthetize the state of the art of methods for identifying candidate technologies for disinvestment and propose an evidence-based framework for executing this task.MethodsAn interpretative review was conducted. A systematic literature search was performed to identify secondary or tertiary research related to disinvestment initiatives and/or any type of research that specifically described one or more methods for identifying potential candidates technologies, services, or practices for disinvestment. An iterative and critical analysis of the methods described alongside the disinvestment initiatives was performed.ResultsSeventeen systematic reviews on disinvestment or related terms (health technology reassessment or medical reversal) were retrieved and methods of 45 disinvestment initiatives were compared. On the basis of this evidence, we proposed a new framework for identifying these technologies based on the wide definition of evidence provided by Lomas et al. The framework comprises seven basic approaches, eleven triggers and thirteen methods for applying these triggers, which were grouped in embedded and ad hoc methods.ConclusionsAlthough identification methods have been described in the literature and tested in different contexts, the proliferation of terms and concepts used to describe this process creates considerable confusion. The proposed framework is a rigorous and flexible tool that could guide the implementation of strategies for identifying potential candidates for disinvestment.
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- 2019
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229. Clusters of nontuberculous mycobacteria linked to water sources at three Veterans Affairs medical centers
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Benjamin Winters, Jennifer Frisch, Erin Boswell, Gina Oda, Mark Holodniy, Amelia Bumsted, Susan C. Bleasdale, Bruce E. Dunn, Susan M. Pacheco, Monica K. Sikka, and Mark A. Winters
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Male ,Microbiology (medical) ,Identification methods ,medicine.medical_specialty ,Hospitals, Veterans ,Epidemiology ,Water source ,Population ,Mycobacterium Infections, Nontuberculous ,030501 epidemiology ,03 medical and health sciences ,Internal medicine ,medicine ,Humans ,Mycobacterium conceptionense ,education ,Mycobacteriaceae ,Veterans Affairs ,Aged ,Aged, 80 and over ,0303 health sciences ,education.field_of_study ,biology ,030306 microbiology ,business.industry ,Sputum ,Nontuberculous Mycobacteria ,Retrospective cohort study ,Middle Aged ,biology.organism_classification ,United States ,United States Department of Veterans Affairs ,Infectious Diseases ,Mycobacterium porcinum ,Female ,Nontuberculous mycobacteria ,0305 other medical science ,business - Abstract
Objective:To characterize nontuberculous mycobacteria (NTM) associated with case clusters at 3 medical facilities.Design:Retrospective cohort study using molecular typing of patient and water isolates.Setting:Veterans Affairs Medical Centers (VAMCs).Methods:Isolation and identification of NTM from clinical and water samples using culture, MALDI-TOF, and gene population sequencing to determine species and genetic relatedness. Clinical data were abstracted from electronic health records.Results:An identical strain of Mycobacterium conceptionense was isolated from 41 patients at VA Medical Centers (VAMCs A, B, and D), and from VAMC A’s ICU ice machine. Isolates were initially identified as other NTM species within the M. fortuitum clade. Sequencing analyses revealed that they were identical M. conceptionense strains. Overall, 7 patients (17%) met the criteria for pulmonary or nonpulmonary infection with NTM, and 13 of 41 (32%) were treated with effective antimicrobials regardless of infection or colonization status. Separately, a M. mucogenicum patient strain from VAMC A matched a strain isolated from a VAMC B ICU ice machine. VAMC C, in a different state, had a 4-patient cluster with Mycobacterium porcinum. Strains were identical to those isolated from sink-water samples at this facility.Conclusion:NTM from hospital water systems are found in hospitalized patients, often during workup for other infections, making attribution of NTM infection problematic. Variable NTM identification methods and changing taxonomy create challenges for epidemiologic investigation and linkage to environmental sources.
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- 2019
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230. Novel identification methods including a species-specific PCR for hazardousBacillusspecies
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Kateřina Solichová, E. Šviráková, Irena Němečková, and Šárka Horáčková
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Identification methods ,Bacillus species ,Bacillus (shape) ,0303 health sciences ,Bacilli ,biology ,030309 nutrition & dietetics ,Strain (biology) ,fungi ,04 agricultural and veterinary sciences ,biology.organism_classification ,040401 food science ,Microbiology ,03 medical and health sciences ,0404 agricultural biotechnology ,Species level ,Sensu ,Cereus ,Food Science - Abstract
Fifteen strains of Bacillus spp. (three B. cereus strains, one B. subtilis, B. macerans, B. pumilus, and B. mycoides strains, and eight unknown isolates from the food-industry) were identified on species level with three designed pairs of primers for B. cereus, B. licheniformis, and B. subtilis. Primers designed for B. licheniformis (BlichF and BlichR) and B. subtilis (BsubF and BsubR) allowed specific species identification, whereas the designed pair of primers for B. cereus (BcerF2 and BcerR2) showed specificity for B. cereus sensu lato, because both B. cereus strains and B. mycoides gave positive reaction. Bacilli identification was also carried out with routine API method with unsatisfactory results. The (GTG)₅-PCR method was used for strain characterization, enabling bacilli classification into separate clusters according to their taxonomic designations.
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- 2019
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231. ANALYSIS OF SKIN PATTERNS OF GERMAN SHEPHERD’S RHINARIUM IN COMPARATIVE ASPECT
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Lyudmila Y Lykhina and Svetlana E Spotkai
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Identification methods ,Human life ,rhinarium’s imprints ,lcsh:S ,General Medicine ,Symmetry line ,papillary patterns ,language.human_language ,Genealogy ,Breed ,German shepherd ,German ,lcsh:Agriculture ,Rhinarium ,Geography ,language ,Identification (biology) ,form of nose’s symmetry line ,biometric identification of dogs - Abstract
The popularity of the German Shepherd breed and its use in many areas of human life creates the need to search for new identification methods to establish ownership. The identification methods available, such as chipping and marking, have several disadvantages. The method of dogs’ identification by rhinarium’s imprint is comparatively cheap and reliable. Papillary patterns reflected on rhinarium’s imprint are relatively constant, and have common and particular signs of difference, which make it possible to distinguish the impression of one dog from another. Dogs of the same breed have a standardized exterior, that is, similarity in external characters, which suggests that there are similarities between common and particular characteristics within the same breed. It is found that imprints of the rhinarium of German shepherd breed dogs, obtained from dogs of different origin, housing and feeding conditions, have common features of papillary patterns peculiar to the given breed. The presented results of the comparison of skin patterns of the rhinarium show that this breed is characterized by a straight, straight round-pointed and V-shaped forms of the nose symmetry line, the majority of the representatives of the breed have prints heavily spotted with lines and, as a rule, have 2 branches of the line of symmetry, which proves the presence of breed characteristics and allows for the use of prints in forensic and forensic veterinary identification of dogs.
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- 2019
232. Validation of a Targeted PCR Method for Raw and Processed Botanical Material Identification: An Example Using Matricaria chamomilla (Chamomile)
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Zhengfei Lu, Yanjun Zhang, Silva Babajanian, Gary Swanson, Peter R. Chang, Monika Arrhenius, and Tiffany Chua
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Identification methods ,Pharmacology ,biology ,Computer science ,business.industry ,biology.organism_classification ,Biotechnology ,Analytical Chemistry ,Identification (information) ,DNA degradation ,Matricaria chamomilla ,Dna genetics ,Test material ,Environmental Chemistry ,Pcr method ,business ,Agronomy and Crop Science ,Analysis method ,Food Science - Abstract
Background: A requirement of current good manufacturing practices for dietary supplements is that manufacturers must identify their dietary ingredients. DNA-based methods can provide species-level authentication that may sometimes be difficult to achieve using conventional morphological and chemical analysis methods. However, because of varying levels of DNA degradation in botanical materials, many commercial tests fail to generate consistent test results across all types of botanical materials. AOAC published guidelines for validation of botanical identification methods and proposed probability of identification (POI) as a method performance parameter. However, few DNA-based botanical authentication methods in the literature follow these guidelines and evaluate POI. Objective: To provide a targeted PCR method validation example that follows AOAC guidelines for validation of botanical identification methods. Methods: Using Matricaria chamomilla (chamomile) as an example, we performed a single-laboratory validation for a targeted PCR method that aimed to identify both raw and processed chamomile materials. The performance parameters of the test were evaluated by carrying out an inclusivity/exclusivity study and a Specified Superior Test Material/Specified Inferior Test Material study to demonstrate that the method’s POI meets industry requirements. Results: The chamomile samples were identified by the method and achieved a POI greater than 0.9 with respect to all types of chamomile botanical materials. Conclusions: The method was validated for DNA-based identification of raw and processed chamomile materials, such as sterilized powders and extracts. Highlights: This work will provide insight for laboratories and manufacturers that aim to develop and validate DNA-based botanical identification methods.
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- 2019
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233. Strategy for the Implementation of Credit Cooperation Management System Based Online Application to Increase the Income of Cooperative and Members
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Agung Sudjatmoko, Febrizal Rahmana, and Aini Farmania
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Competition (economics) ,Identification methods ,Outreach ,Process management ,business.industry ,Management system ,Information technology ,Community service ,business ,Business management ,Adaptation (computer science) - Abstract
The application of business management systems and cooperative organizations faces the challenges of the development of business dynamics due to the development of science and technology. The use of information technology in all business actors is a form of adaptation to anticipate business development that aims to increase competitiveness and win competition. Cooperative is a business that still has obstacles in optimizing the use of IT to manage businesses in providing services to members. Therefore, through the use of the cooperative organization's business identification methods, the analysis of the guidelines for the use of cooperative online systems, training and outreach, and evaluating the implementation of activities. In this case, the community service activities can provide results that have an impact on optimizing the online cooperative system in improving services and incomes of members and cooperatives.
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- 2019
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234. Maximum likelihood based identification methods for rational models
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Yanjun Liu, Jing Chen, Feng Ding, and Quanmin Zhu
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Identification methods ,0209 industrial biotechnology ,Computer science ,Estimation theory ,Maximum likelihood ,Particle swarm optimization ,02 engineering and technology ,Least squares ,Rational planning model ,Computer Science Applications ,Theoretical Computer Science ,Noise ,020901 industrial engineering & automation ,Control and Systems Engineering ,0202 electrical engineering, electronic engineering, information engineering ,020201 artificial intelligence & image processing ,Algorithm - Abstract
In a rational model, some terms of the information vector are correlated with the noise, which makes the traditional least squares based iterative algorithms biased. In order to overcome th...
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- 2019
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235. 16S rDNA high-throughput sequencing and MALDI-TOF MS are complementary when studying psychrotrophic bacterial diversity of raw cows' milk
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Patrick J. Biggs, Koon Hoong Teh, Steve Flint, Dong Zhang, and Jon Palmer
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Identification methods ,biology ,Pseudomonas ,Food spoilage ,food and beverages ,Raw milk ,16S ribosomal RNA ,biology.organism_classification ,medicine.disease_cause ,Applied Microbiology and Biotechnology ,DNA sequencing ,Matrix-assisted laser desorption/ionization ,Psychrotrophic bacteria ,medicine ,Food science ,Food Science - Abstract
Refrigeration of raw milk favours the growth of psychrotrophic bacteria (psychrotrophs) that can produce spoilage enzymes, which may deteriorate final dairy products. The psychrotrophs from raw milk across four seasons were identified using culture-dependent and culture-independent approaches. Both 16S rDNA high-throughput sequencing (HTS) and MALDI-TOF MS showed the Pseudomonas genus to predominate; however, predominant species differed between the two identification methods. There was no geographical trend in microbiota, but a seasonal variation was evident. The use of HTS and MALDI-TOF MS was complementary in describing the psychrotrophic bacterial diversity of raw milk and provides an understanding of the raw milk microflora that may influence milk quality. This is the first report to compare data obtained from 16S rDNA high-throughput sequencing and MALDI-TOF analysis to assess the psychrotrophic microbial quality of refrigerated raw milk in New Zealand.
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- 2019
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236. Morphology and metabarcoding: a test with stream diatoms from Mexico highlights the complementarity of identification methods
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José H. Grau, Jonas Zimmermann, Sebastian Proft, Nélida Abarca, Javier Carmona, Demetrio Mora, Regine Jahn, Oliver Skibbe, and Neela Enke
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0106 biological sciences ,Identification methods ,0303 health sciences ,Ecology ,biology ,Morphology (biology) ,Aquatic Science ,Test (biology) ,biology.organism_classification ,010603 evolutionary biology ,01 natural sciences ,DNA barcoding ,03 medical and health sciences ,Diatom ,Evolutionary biology ,Complementarity (molecular biology) ,Bioindicator ,Ecology, Evolution, Behavior and Systematics ,030304 developmental biology - Abstract
Diatoms are among the most commonly used bioindicators. Correct taxonomic identifications are critical to their use as bioindicators because closely related diatom species can respond diffe...
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- 2019
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237. Mobile Face Recognition Application using Eigen face Approaches for Android
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mais mohamed husein and Dhia Alzubaydi
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Identification methods ,Biometrics ,Computer science ,business.industry ,Eigen face, Cascade classifier ,Facial recognition system ,Mobile phone ,lcsh:Q ,Computer vision ,Mobile technology ,Artificial intelligence ,Android (operating system) ,lcsh:Science ,Finger print ,business ,Cascading classifiers ,Earth-Surface Processes - Abstract
Face recognition is one of current biometrics identification methods, that based on the measuring to one of human biological characteristics and utilize them to recognize individuals. these characteristics which are called biometric they are hard to fake because they identify a person by measuring one of its biological characteristics such as (finger print, iris print and face print). With the rapid improvement of mobile technologies that happen in last decade face recognition process can make using mobile phone, this paper explains the building of mobile face recognition system using Eigen face approach, Experimental results have been tested on a local data-set that has been created to analyze the efficiency of the application in various cases including different illumination conditions, variation of view, and orientation, the recognition rate of the application when testing on Galaxy Grand Prime + was 78.4. while The recognition rate when testing on Galaxy Note 5 was 82.4. The accuracy of this application can reach to 100% if we use camera with high accuracy and on good light condition.
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- 2019
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238. Acoustic properties of early vocalizations in infants with fragile X syndrome
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Bridgette L. Tonnsen, Lisa R. Hamrick, and Amanda Seidl
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Male ,Identification methods ,congenital, hereditary, and neonatal diseases and abnormalities ,medicine.medical_specialty ,Autism Spectrum Disorder ,Population ,Audiology ,behavioral disciplines and activities ,Article ,03 medical and health sciences ,0302 clinical medicine ,Risk Factors ,mental disorders ,medicine ,Humans ,0501 psychology and cognitive sciences ,education ,Genetics (clinical) ,education.field_of_study ,High prevalence ,Social communication ,business.industry ,General Neuroscience ,05 social sciences ,Infant ,Cognition ,Acoustics ,medicine.disease ,Fragile X syndrome ,Autism spectrum disorder ,Child, Preschool ,Fragile X Syndrome ,Autism ,Female ,Neurology (clinical) ,business ,Child Language ,030217 neurology & neurosurgery ,050104 developmental & child psychology - Abstract
Fragile X syndrome (FXS) is a neurogenetic syndrome characterized by cognitive impairments and high rates of autism spectrum disorder (ASD). FXS is often highlighted as a model for exploring pathways of symptom expression in ASD due to the high prevalence of ASD symptoms in this population and the known single-gene cause of FXS. Early vocalization features-including volubility, complexity, duration, and pitch-have shown promise in detecting ASD in idiopathic ASD populations but have yet to be extensively studied in a population with a known genetic cause for ASD such as FXS. Investigating early trajectories of these features in FXS may inform our limited knowledge of potential mechanisms that predict later social communication outcomes. The present study addresses this need by presenting preliminary findings which (a) characterize early vocalization features in FXS relative to low-risk controls (LRC) and (b) test the specificity of associations between these features and language and ASD outcomes. We coded vocalization features during a standardized child-examiner interaction for 39 nine-month-olds (22 FXS, 17 LRC) whose clinical outcomes were assessed at 24 months. Our results provide preliminary evidence that within FXS, associations between vocalization features and 24-month language outcomes may diverge from those observed in LRC, and that vocalization features may be associated with later ASD symptoms. These findings provide a starting point for more research exploring these features as potential early markers of ASD in FXS, which in turn may lead to improved early identification methods, treatment approaches, and overall well-being of individuals with ASD. Autism Res2019. © 2019 International Society for Autism Research, Wiley Periodicals, Inc. LAY SUMMARY: Although vocal features of 9-month-olds with FXS did not differ from those of low-risk controls, several features were associated with later language and ASD outcomes at 24 months in FXS. These preliminary results suggest acoustic data may be related to clinical outcomes in FXS and potentially other high-risk populations. Further characterizing these associations may facilitate understanding of biological mechanisms and risk factors associated with social communication development and ASD.
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- 2019
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239. A study on wrist identification for forensic investigation
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Frodo Kin Sun Chan, Adams Wai Kin Kong, and Wojciech Michal Matkowski
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FOS: Computer and information sciences ,Identification methods ,Biometrics ,Computer science ,business.industry ,Computer Vision and Pattern Recognition (cs.CV) ,Computer Science - Computer Vision and Pattern Recognition ,020207 software engineering ,02 engineering and technology ,Wrist ,Identification (information) ,medicine.anatomical_structure ,Signal Processing ,0202 electrical engineering, electronic engineering, information engineering ,medicine ,Crime scene ,020201 artificial intelligence & image processing ,Computer vision ,Segmentation ,Computer Vision and Pattern Recognition ,Artificial intelligence ,Feature set ,business ,Gesture - Abstract
Criminal and victim identification based on crime scene images is an important part of forensic investigation. Criminals usually avoid identification by covering their faces and tattoos in the evidence images, which are taken in uncontrolled environments. Existing identification methods, which make use of biometric traits, such as vein, skin mark, height, skin color, weight, race, etc., are considered for solving this problem. The soft biometric traits, including skin color, gender, height, weight and race, provide useful information but not distinctive enough. Veins and skin marks are limited to high resolution images and some body sites may neither have enough skin marks nor clear veins. Terrorists and rioters tend to expose their wrists in a gesture of triumph, greeting or salute, while paedophiles usually show them when touching victims. However, wrists were neglected by the biometric community for forensic applications. In this paper, a wrist identification algorithm, which includes skin segmentation, key point localization, image to template alignment, large feature set extraction, and classification, is proposed. The proposed algorithm is evaluated on NTU-Wrist-Image-Database-v1, which consists of 3945 images from 731 different wrists, including 205 pairs of wrist images collected from the Internet, taken under uneven illuminations with different poses and resolutions. The experimental results show that wrist is a useful clue for criminal and victim identification. Keywords: biometrics, criminal and victim identification, forensics, wrist.
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- 2019
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240. Management and Control of Cattle Using Identification by RFID Technology
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Marcelo Henrique Stoppa, Rogério Teixeira Reis, and Bruno Pereira Barella
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Electronic identification ,Identification methods ,0303 health sciences ,030505 public health ,030309 nutrition & dietetics ,Computer science ,business.industry ,Control (management) ,General Medicine ,Reliability engineering ,03 medical and health sciences ,Identification (information) ,Radio-frequency identification ,0305 other medical science ,business - Abstract
Here is presented a survey of the most common cattle identification methods comparing advantages, disadvantages and costs in the utilization of a new Identification model that uses tags with Radio Frequency Identification Devices (RFID). From there, a RFID system of evaluation is proposed for management automated. When the herd pass through a monitored portal, it can be obtained the immediate identification of each animal. Three tests were performed to verify the better position of the RFID reader in order to determine a setting for it and verify that the settings selected for the assembly of the system remains adequate. The use of this system gives the producer an electronic identification, facilitating the management, identification and control of the herd.
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- 2019
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241. Colorimetric Detection of Horse Meat Based on Loop-Mediated Isothermal Amplification (LAMP)
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Juan Dong, Zhuo Tang, Feng Du, Gangyi Chen, Xin Cui, Sheng Ding, Hengxing Liang, Yuping Wan, Ke Shang, Jiayu Wang, and Mei Li
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Identification methods ,food.ingredient ,Computer science ,010401 analytical chemistry ,Horse meat ,Loop-mediated isothermal amplification ,food and beverages ,04 agricultural and veterinary sciences ,040401 food science ,01 natural sciences ,Applied Microbiology and Biotechnology ,Food Analysis ,0104 chemical sciences ,Analytical Chemistry ,0404 agricultural biotechnology ,food ,Food supply ,Food science ,Safety, Risk, Reliability and Quality ,Animal species ,Safety Research ,Food Science - Abstract
Meat authentication and meat adulteration have become a growing global concern leading to consumers’ demand for accurate meat identification methods. Since existing methods for meat identification are cumbersome and require specialized equipment and/or training, we developed a specific colorimetric detection method that can rapidly identify horse meat as few as 0.1% contamination in xenogeneic meat sources within 1 h with no false-positive signals observed. Specificity analysis revealed no cross-reactivity with 14 other animal species. Therefore, a rapid on-site survey based on our method can be set up to identify undeclared meat in the food supply chain and contributes to an approach on food analysis by meeting the demands for quick and easy-to-perform analytical methods.
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- 2019
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242. A reevaluation of bird taxonomic identifications at Contact‐ and historic‐era North American sites
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Jessica E. Watson and Sarah Heins Ledogar
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Identification methods ,Archeology ,Geography ,Ecology ,Anthropology ,Species diversity ,Morphology (biology) - Published
- 2019
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243. First Report on Identification of Fusarium graminearum Species Complex Members from Turkey and Iran
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Emre Yörük, Özlem Sefer, Berna Tunali, Bayram Kansu, and Bahram Sharifnabi
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Fusarium ,Genetics ,Identification methods ,Species complex ,biology ,multilocus genotyping ,lcsh:S ,food and beverages ,dna sequencing ,General Medicine ,biology.organism_classification ,lcsh:S1-972 ,DNA sequencing ,lcsh:Agriculture ,fusarium graminearum ,Identification (biology) ,lcsh:Agriculture (General) ,species complex ,Pathogen ,Gene ,Genotyping ,fusarium head blight - Abstract
Fusarium graminearum species complex is the major Fusarium head blight disease pathogen in worldwide. Fusarium head blight disease lead to damages on small grain cereals. The identification of the F. graminearum species complex is important for improving disease control and management. Traditional identification methods such as macroscopy and microscopy analysis need to be supported by biochemical and genetics assays. Thus, DNA sequencing-based methods is one of the most preferred, reliable, low priced in the identification methods. In the study, 54 F. graminearum isolates obtained from diseased wheat, barley and corn fields in Turkey and Iran were identified by morphological characteristics and then characterized by species-specific SCAR marker. β-tubulin, Tef1-α, 28s rDNA and Histone H3 genes amplified, purified and then sequenced. The merged multiloci length was obtained as last of all 2215 bp. These sequencing results was used to multiloci genotyping assays. Last of all, 20 isolates were determined as F. graminearum sensu stricto by multiloci genotyping analysis. Remaining isolates were identified as F. asiaticum or Fusarium sp. . The findings are important in terms of revealing the first-time identification in Turkish and Iranian isolates as F. graminearum species complex members by amplification four (β-tubulin, Tef1-α, 28s rDNA and Histone H3) highly conserved DNA regions.
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- 2019
244. Physiologic Stress of Ear Punch Identification Compared with Restraint Only in Mice
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Lon V. Kendall and Kyle T Taitt
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Male ,Restraint, Physical ,Identification methods ,Pain ,Physiology ,Body Temperature ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Heart Rate ,Laboratory Animal Science ,Stress, Physiological ,Heart rate ,Animals ,Medicine ,Punching ,030304 developmental biology ,Baseline values ,0303 health sciences ,integumentary system ,business.industry ,Husbandry ,Female ,Animal Science and Zoology ,business ,030217 neurology & neurosurgery - Abstract
Social housing of laboratory rodents is recommended whenever possible to encourage natural behavior and social dynamics. Several identification methods are used to distinguish rodents from one another. One of the most common means of identifying mice is ear punching. The effect of ear punching for identification or genotyping on the welfare of mice remains a concern, because this method negatively affects welfare in other species. To assess the influence of ear punching on the welfare of mice, we implanted telemetry units in 6 female Swiss–Webster mice and monitored heart rate, body temperature, and activity after various routine procedures. The physiologic and behavioral responses to restraint (by scruffing) only, restraint and ear punching, and routine handling for husbandry were evaluated. The mean heart rate of mice after receiving an ear punch was significantly higher than baseline values at 30 min after the procedure, and the mean body temperature was significantly increased over baseline for at least 1 h. The heart rate, body temperature, and activity levels of mice after scruffing only and routine handling did not differ from baseline values. The proportion of time mice spent head grooming, a potentially nocifensive behavior, was increased immediately after ear punching and began to decline by 60 min. We show that the physiologic stress of mice receiving an ear punch was greater than that from restraint (scruffing) alone, whereas behavioral indices of pain were unchanged, suggesting that ear punching causes a transient response in mice.
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- 2019
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245. Application of a mode shape derivative-based damage index in artificial neural network for structural damage identification in shear frame building
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Animesh Paral, Amiya K. Samanta, and Dilip Kr. Singha Roy
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Identification methods ,Artificial neural network ,business.industry ,Computer science ,010401 analytical chemistry ,Baseline model ,Stiffness ,020101 civil engineering ,02 engineering and technology ,Structural engineering ,01 natural sciences ,0201 civil engineering ,0104 chemical sciences ,Modal ,Shear (geology) ,Normal mode ,Assessment methods ,medicine ,medicine.symptom ,Safety, Risk, Reliability and Quality ,business ,Civil and Structural Engineering - Abstract
Artificial Neural Networks (ANN) have been proven applicable for updating finite-element (FE) baseline model and structural damage assessment. Most ANN-based damage identification methods use natural frequencies and mode shapes as input layer, limiting their application to quantifying single symmetrical damage in small structures. However, getting higher modal information of a structure is a crucial challenge in practice. As of late, researchers began utilizing mode shape derivatives as input layer in ANN to defeat the challenges for damage assessment in real-life structures. This study, therefore, proposes an ANN-based damage assessment method that employs the change in the first mode shape slope (CFMSS) damage index (DI) as input layer in ANN. For single-damage scenarios, the CFMSS-based DI has been able to detect, locate, and quantify the damage. For multiple-damage scenarios, the DI and corresponding stiffness reduction (SR) are fit as input and output layers, respectively, in ANN to measure the damage severity. Structural damage intensity is indicated as rate of decrease in story stiffness compared to baseline model. The efficiency of the proposed damage identification method is demonstrated through a nine-story numerical shear frame model and an experimental test on a three-story steel shear frame model.
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- 2019
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246. Coastal migration patterns of the four largest Barents Sea Atlantic salmon stocks inferred using genetic stock identification methods
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Juha-Pekka Vähä, J. Brian Dempson, Michael Power, Per Fauchald, Mikhail Ozerov, Eero Niemelä, Martin-A. Svenning, Morten Falkegård, Sergey Prusov, and Vidar Wennevik
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0106 biological sciences ,Identification methods ,Atlantic salmon ,medicine.medical_specialty ,coastal fishery ,Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480 [VDP] ,Aquatic Science ,Biology ,Oceanography ,Genetic stock ,010603 evolutionary biology ,01 natural sciences ,Aquatic organisms ,migration models ,Barents Sea ,Molecular genetics ,medicine ,genetics ,Ecology, Evolution, Behavior and Systematics ,Ecology ,010604 marine biology & hydrobiology ,Aquatic animal ,salmon stock origin ,Microsatellite ,Identification (biology) - Abstract
Combining detailed temporal and spatial catch data, including catch per unit effort, with a high-resolution microsatellite genetic baseline facilitated the development of stock-specific coastal migration models for the four largest Atlantic salmon (Salmo salar) populations, Målselv, Alta, Tana and Kola rivers, contributing to the Barents Sea mixed-stock fishery. Målselv salmon displayed a restricted coastal movement with 85% of the fish captured within 20 km of their natal river. Kola salmon also demonstrated limited coastal movements in Norwegian waters, with most (> 90%) caught in eastern Finnmark. Multi-sea-winter (MSW) Alta salmon were caught west of Alta fjord across a broader stretch of coast while one-sea-winter (1SW) fish migrated more extensively along the coast prior to river entry. Tana salmon, however, were detected over a broad expanse (600 km) of the North-Norwegian coast. For all populations MSW salmon dominating catches earlier in the season (May–June) while 1SW fish were more common from July to August. This study provides an example of how traditional catch and effort information may be combined with genetic methods to obtain insights into spatial and temporal changes in Atlantic salmon catch composition and their associated migration patterns in a mixed-stock coastal fishery.
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- 2019
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247. Development and Validation of an Efficient Method for Processing Microplastics in Biota Samples
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Zimin Yu, Eddy Y. Zeng, Liang-Ying Liu, Charles S. Wong, and Bo Peng
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Identification methods ,Microplastics ,Pearl river delta ,South china ,010504 meteorology & atmospheric sciences ,Health, Toxicology and Mutagenesis ,010501 environmental sciences ,Nitric Acid ,01 natural sciences ,Present method ,Animals ,Environmental Chemistry ,Particle Size ,0105 earth and related environmental sciences ,Aquatic ecosystem ,Fishes ,Biota ,Hydrogen Peroxide ,Mussel ,6. Clean water ,Bivalvia ,Gastrointestinal Tract ,Biodegradation, Environmental ,Environmental chemistry ,Environmental science ,Water Pollutants, Chemical ,Environmental Monitoring - Abstract
The impacts of microplastics on aquatic ecosystems and biota are gaining attention globally. Although microplastics have been widely detected in biota, there currently are few standardized detection and identification methods. The present study developed a novel one-step digestion method which was evaluated with mussel and fish samples. This method employed nitric acid and hydrogen peroxide (HNO3 :H2 O2 = 4:1 by volume) as digestion reagents, which completely digested biota samples 0.05) were observed for all tested polymers. Fourier transform infrared spectral analyses demonstrated that the method did not degrade any of the polymers except for polyethylene terephthalate. The method was demonstrated with mussel and fish samples collected from the Pearl River delta, south China, and was able to recover microplastics effectively. Overall, the present method is time-saving and easy to operate, with low procedural cross-contamination. The properties of microplastics recovered by the present method remained largely intact, greatly benefiting subsequent qualitative and quantitative analyses. Environ Toxicol Chem 2019;38:1400-1408. © 2019 SETAC.
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- 2019
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248. Improved identification methods for thermal power equipment mathematical models
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Pavel Safronov, Aleksei Maksimov, and Vitaliy Alekseyuk
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Identification methods ,Mathematical model ,lcsh:TA1-2040 ,Computer science ,lcsh:TA1001-1280 ,Thermal power station ,Control engineering ,lcsh:Transportation engineering ,lcsh:Engineering (General). Civil engineering (General) - Published
- 2019
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249. Criminalistics Identification as Special Criminalistics Methodand its Role in Investigating Crimes
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Valerii V. Biryukov and Tatyana P. Biryukova
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Identification methods ,Event (computing) ,Computer science ,identification field ,Exact science ,Legislation ,identification period ,Data science ,Identification (information) ,forensic identification ,scientific and technical means ,Information system ,Natural (music) ,identification objects ,retrospective knowledge ,identification features ,Law ,technologies - Abstract
The article focuses on the basics of criminalistics identification. The authors emphasize that the emergence of the method of criminalistics identification was initiated by the need to obtain reliable knowledge about the crime event and all its components. The need to recreate a picture of the past event and establish all the objects involved in it, and as a result, its correct legal assessment from the standpoint of current legislation, initiates the use of reliable methods based on the knowledge of the natural and exact sciences by the subjects of investigation. The role and place of the considered method in identification methods, as well as the impact of the achievements of scientific and technical progress on the improvement of identification technologies are shown. It is noted that this method, as a reliable tool of knowledge, along with the investigating crimes, is increasingly being used in other spheres of human activity. A special place belongs to him in the work of modern information systems.
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- 2019
250. Malware homology identification based on a gene perspective
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Yi-hang Chen, Bing-lin Zhao, Zheng Shan, Fudong Liu, Wenjie Sun, and Bo Zhao
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Identification methods ,021110 strategic, defence & security studies ,Software_OPERATINGSYSTEMS ,Application programming interface ,Computer Networks and Communications ,Computer science ,0211 other engineering and technologies ,Partition problem ,020206 networking & telecommunications ,02 engineering and technology ,computer.software_genre ,ENCODE ,Homology (biology) ,ComputingMethodologies_PATTERNRECOGNITION ,Dependency graph ,Hardware and Architecture ,Signal Processing ,0202 electrical engineering, electronic engineering, information engineering ,Malware ,Data mining ,Electrical and Electronic Engineering ,computer ,Gene - Abstract
Malware homology identification is important in attacking event tracing, emergency response scheme generation, and event trend prediction. Current malware homology identification methods still rely on manual analysis, which is inefficient and cannot respond quickly to the outbreak of attack events. In response to these problems, we propose a new malware homology identification method from a gene perspective. A malware gene is represented by the subgraph, which can describe the homology of malware families. We extract the key subgraph from the function dependency graph as the malware gene by selecting the key application programming interface (API) and using the community partition algorithm. Then, we encode the gene and design a frequent subgraph mining algorithm to find the common genes between malware families. Finally, we use the family genes to guide the identification of malware based on homology. We evaluate our method with a public dataset, and the experiment results show that the accuracy of malware classification reaches 97% with high efficiency.
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- 2019
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