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As the most effective irrigation method in arid and semi-arid regions, drip irrigation under mulch could general comprehension of the production efficiency of agricultural irrigation water, and reduce agriculture consumption of water resources. The paper has carried out an investigation over a two year period (2020–2021) in a semi-arid climate in the Hexi Oasis region of China, aiming at determining the influence of regulated deficit irrigation (RDI) under mulch on the growth, yield, water use efficiency (WUE), irrigation water use efficiency (IWUE) and quality of pumpkin at different growth stages. A total of nine treatments with three irrigation levels (75–85% field capacity, 65–75% field capacity, and 55–65% field capacity) have been used in four growing periods of pumpkin (seedling, vine extension, fruit expansion, and maturation stages). The results have shown that light water deficit treatment at the seedling stage had the highest water use efficiency (12.47 kg/m3) without significantly affecting yield (45,966.90 kg/ha), and improved pumpkin fruit quality. It was concluded that light water deficit at the seedling stage and adequate irrigation at other development stages was the optimal irrigation strategy for pumpkin growth. The results of this research provide theoretical and technical support for efficient water-saving plantation and industrialization of pumpkin in the Hexi Oasis.

The transmission power of important receiving section is generally large, and tripping of high-voltage line will cause the risk of chain failure of the system. This paper analyzes the electromagnetic ring network mechanism model and operating characteristics, taking into account the actual grid operating characteristics, and proposes 1000kV/500kV partitioned weak connection mode electromagnetic ring network operating mode. This model can not only improve the stability of the important send to receive section can also inhibit low voltage level short-circuit current level does not exceed the standard. Through the analysis of the actual grid cases, the effectiveness of the proposed 1000kV/500kV partitioned weak link mode electromagnetic ring network operation mode is demonstrated.

Considerable differences in molecular characteristics have been defined between non-smoker and smokers in patients with lung adenocarcinoma (LUAD), yet study of open chromatin patterns associated with LUAD progression caused by smoking is still lacking. Here, we constructed a novel network based on correlations between each ATAC-seq peak from TCGA data using our previously developed algorithm. Subsequently, principal component analysis was performed on LUAD samples with retained peaks filtered by the correlation network and pathway analysis was conducted for potential pathways identification. Results were verified in an independent dataset from primary LUAD samples. We identified a set of peaks that clearly differentiated long-term from short-term smokers in LUAD patients and also significantly associated with overall survival of these patients. We then investigated the gene set related to those peaks and found that the comprising genes are strongly associated with LUAD development, such as B3GNT3, ACTN4 and CLDN3. They are consistent with the important roles for the associated pathways in LUAD oncogenesis induced by smoking, including glycosphingolipid biosynthesis and tight junction pathways.In summary, our study may provide valuable insights on exploration of ATAC-seq peaks and on smoking-related LUAD carcinogenesis from a perspective of open chromatin changes.

Background Cataracts are commonly seen during the diagnosis of rhegmatogenous retinal detachment (RRD) or occur following its surgical management. Refractive changes following combined phacoemulsification and vitrectomy (phacovitrectomy) can affect the quality of vision. This study aimed to evaluate the refractive changes following vitrectomy versus phacovitrectomy in patients with RRD. Methods A total of 96 patients who underwent retinal surgery for RRD in one eye, between August 2016 and January 2018, were enrolled and divided into three groups. In 18 eyes, 23-gauge transconjunctival sutureless vitrectomy (23G TSV) was performed (group A); 25G TSV was performed in 49 eyes (group B), and phacovitrectomy with 25G TSV was performed in 29 eyes (group C). Silicone oil was injected after the surgery in all three groups. Anterior and posterior corneal astigmatism, axial length (AL), and anterior chamber depth (ACD) were measured at baseline and postoperatively at 1 week, 1 month, and 3 months. Results Anterior and posterior corneal astigmatism did not change, and AL continued to increase for 3 months after surgery, whereas ACD decreased postoperatively but quickly returned to baseline in groups A and B. In group C, anterior and posterior corneal astigmatism, AL, and ACD increased postoperatively, and corneal astigmatism returned to baseline by 3 months, but AL and ACD continued to increase for 3 months. Conclusion Vitrectomy alone does not affect anterior or posterior corneal astigmatism. Following vitrectomy, the AL increases, while the ACD decreases transiently. When vitrectomy is combined with phacoemulsification for cataract removal, the anterior and posterior corneal astigmatism increases transiently, while AL and ACD are enlarged for several months following surgery.

Neoantigen-based immunotherapy has yielded promising results in clinical trials. However, it is limited to tumor-specific mutations, and is often tailored to individual patients. Identifying suitable tumor-specific antigens is still a major challenge. Previous proteogenomics studies have identified peptides encoded by predicted non-coding sequences in human genome. To investigate whether tumors express specific peptides encoded by non-coding genes, we analyzed published proteomics data from five cancer types including 933 tumor samples and 275 matched normal samples and compared these to data from 31 different healthy human tissues. Our results reveal that many predicted non-coding genes such as DGCR9 and RHOXF1P3 encode peptides that are overexpressed in tumors compared to normal controls. Furthermore, from the non-coding genes-encoded peptides specifically detected in cancers, we predict a large number of “dark antigens” (neoantigens from non-coding genomic regions), which may provide an alternative source of neoantigens beyond standard tumor specific mutations., Rong Xiang et al. analyze the expression of non-coding genes encoded peptides in publicly-available proteomics data from five cancer types and matched controls. They identify peptides from non-coding genes including DGCR9 and RHOXF1P3 that are upregulated in tumors compared to controls, suggesting that non-coding gene-encoded peptides may be a source of neoantigens in some cancers.

Modeling of genomic profiles from the Cancer Genome Atlas (TCGA) by using recently developed mathematical frameworks has associated a genome-wide pattern of DNA copy-number alterations with a shorter, roughly one-year, median survival time in glioblastoma (GBM) patients. Here, to experimentally test this relationship, we whole-genome sequenced DNA from tumor samples of patients. We show that the patients represent the U.S. adult GBM population in terms of most normal and disease phenotypes. Intratumor heterogeneity affects ≈ 11 % and profiling technology and reference human genome specifics affect 30%. With a 2.25-year Kaplan–Meier median survival difference, a 3.5 univariate Cox hazard ratio, and a 0.78 concordance index, i.e., accuracy, the pattern predicts survival better than and independent of age at diagnosis, which has been the best indicator since 1950. The prognostic classification by the pattern may, therefore, help to manage GBM pseudoprogression. The diagnostic classification may help drugs progress to regulatory approval. The therapeutic predictions, of previously unrecognized targets that are correlated with survival, may lead to new drugs. Other methods missed this relationship in the roughly 3B-nucleotide genomes of the small, order of magnitude of 100, patient cohorts, e.g., from TCGA. Previous attempts to associate GBM genotypes with patient phenotypes were unsuccessful. This is a proof of principle that the frameworks are uniquely suitable for discovering clinically actionable genotype–phenotype relationships.

Previous proteogenomics studies have identified peptides encoded by non-coding sequences such as pseudogenes and long non-coding RNAs (lncRNAs) in healthy human tissues as well as in cancers. However, these studies are either limited to analyze only healthy or cancerous tissues, lacking direct comparison between them. In this study, we used an established proteogenomics analysis workflow to analyze proteomics data from 926 cancer samples of five cancer types and 31 different healthy human tissues. We observed the protein level expression of pseudogenes can be classified as ubiquitous or lineage expression. The ubiquitously translated pseudogenes are homologous to house-keeping genes. Our results suggest there is common mechanism underlying the translation of pseudogenes in both normal and tumors. Moreover, we discovered several translated non-coding genes such as DGCR5 and RHOXF1P3 that were up-regulated in tumors compared to normal. These translated pseudogenes imply the biological function of pseudogenes extends to protein level yet to be studied. Further, from the non-coding region encoded peptides specifically detected in tumors we have predicted a large number of potential neoantigens which can be developed as cancer vaccine.

The unmixing of grain-size distribution (GSD) with multivariate statistical analysis provides insight into sediment provenance, transport processes and environment conditions. In this article, we performed hierarchical clustering endmember modeling analysis (CEMMA) to identify the sedimentary environment of fluvial deposits at core HDZ04 drilled in the paleofloodplain on the north bank of the upper Yellow River. The CEMMA results show that four end members can effectively explain the variance in the dataset. End-Member 1 and End-Member 2 are polymodal and dominated by silty clay, and they are associated with the suspended load. End-Member 3 is composed of fine sand and silt, and medium-coarse sand makes up the majority of End-Member 4, corresponding to a mixed saltation load and bed load, respectively. Combined with the end-member scores, we constructed energy values to further divide the core samples into different depositional environments. Unit 2 and unit 5 have a high proportion of coarser end-member components, presenting a shallow channel and a high-energy channel environment, respectively. Unit 1 and unit 3 are composed of fine-grained silt and clay and are dominated by finer end-member components, which can be interpreted as a floodplain situation. Unit 4 is characterized by frequent fluctuations in grain-size composition and energy values, indicating the transition from a high-energy river channel to floodplain deposits. For the channel sedimentary environment, the accumulation rate was relatively low (0.32 mm/yr) due to the frequency migration of the channel. A high accumulation rate of the fluvial deposits had occurred in unit 1 during 1.6 Ka (4.35 mm/yr), which was a response to the influence of increased fluvial instability and human activity during the late Holocene.

Renewable energy has typical intermittent characteristics, strong random fluctuation of output, and insufficient support capacity at peak load. Therefore, the power supply guarantee of high proportion of renewable energy power system is facing severe challenges. Renewable energy allocation and energy storage can solve the problem of random volatility of renewable energy to a certain extent. In this context, based on the operation mechanism of electrochemical energy storage, this paper establishes the Renewable energy + Energy storage operation optimization model considering the operation safety characteristics of electrochemical energy storage. In order to provide technical support for the planning and construction of related enterprises, the paper explores the effectiveness of large-scale renewable energy configuration of electrochemical energy storage, and analyzes the impact of different energy storage operation modes which is solved by CPLEX. The results indicate that renewable energy configuration energy storage can improve its confidence capacity and reduce the peak valley difference rate of net load, but the specific effect is closely related to the operation mode of energy storage.

This work proposed a two-stage pretreatment with alkaline sulphonation and steam treatment, and investigated its efficiency for converting Eucalyptus woody biomass to fermentable sugars and bioethanol. Comparing with steam pretreatment and subsequent sulphonation, this alkaline sulphonation-steam pretreatment improved carbohydrate recovery by maintaining a more neutral pH throughout the pretreatment process, while promoting the enzymatic digestibility of biomass through lignin removal and modification. Results showed that the alkaline sulphonation-steam pretreatment caused lignin removal of 69.37% and 120.28 mmol/kg acid groups incorporation into substrate, both of which could lead to significantly improved cellulose accessibility. About 80% of the sugars present in the original carbohydrate (cellulose and hemicellulose) were released, which could be recovered after pretreatment and enzymatic hydrolysis. The sugars released from enzymatic hydrolysis of substrate pretreated by alkaline sulphonation-steam pretreatment could be efficiently converted to ethanol, indicating that alkaline sulphonation-steam two-stage pretreatment is a promising pretreatment approach of lignocellulosic biomass for the production of biofuels.

Background Macrophages are highly plastic cells that play an important role in the pathogenesis of cardiovascular disease. Objectives This study investigated the role of GATA3-positive macrophages in modulating cardiac function after myocardial infarction (MI) or in response to pressure overload hypertrophy. Methods Myeloid-specific GATA3-deficient (mGATA3KO) mice were generated, MI or pressure overload was induced, and cardiac function was determined by echocardiography. GATA3-sufficient Cre mice were used as a control. Immunohistochemical staining, flow cytometry, MILLIPLEX Mouse Cytokine/Chemokine Assay, cultured macrophages, quantitative real-time polymerase chain reaction, and western blot were used to determine the role of GATA3 in macrophages. Results GATA3-positive macrophages rapidly accumulated in the infarcted region of the myocardium after acute MI. Deficiency of GATA3-positive macrophages led to a significant improvement of cardiac function in response to acute MI or pressure overload hypertrophy compared with the control mice. This improvement was associated with the presence of a large number of proinflammatory Ly6Chi monocytes/macrophages and fewer reparative Ly6Clo macrophages in the myocardium of mGATA3KO mice compared with control mice. Analysis of serum proteins from the 2 mouse genotypes revealed no major changes in the profile of serum growth factors and cytokines between the 2 mice genotypes before and after MI. GATA3 was found to be specifically and transiently induced by interleukin 4 in cultured macrophages through activity of the proximal promoter, whereas the distal promoter remained silent. In addition, the absence of GATA3 in macrophages markedly attenuated arginase-1 expression in cultured macrophages. Conclusions We demonstrated that the presence of GATA3-positive macrophages adversely affects remodeling of the myocardium in response to ischemia or pressure overload, whereas the absence of these macrophages led to a significant improvement in cardiac function. Targeting of signaling pathways that lead to the expression of GATA3 in macrophages may have favorable cardiac outcomes.

In this study, acrylamide-containing crosslinking agents 2,4-diacrylamidebenzenesulfonic acid (AC-DABS1) and 2,5-diacrylamidebenzenesulfonic acid (AC-DABS2) were synthesized and applied to cotton fabric as durable press finishing agents under alkaline conditions. The target products were characterized by high-performance liquid chromatography (HPLC) and proton nuclear magnetic resonance. The stability of the acrylamide group in alkaline solution was investigated by model compound para-acrylamidebenzenesulfonic acid. The efficiency of AC-DABS1 and AC-DABS2 as durable press finishing agents was examined and compared by testing the wrinkle recovery angle (WRA), tearing strength retention (TSR) and washing durability under different conditions using the steaming process. The performance of fabric treated with 1,3,5-triacroylaminohexahydro-s-triazine (FAP) was also investigated and compared with those treated with acrylamide-containing crosslinking agents. The results showed that the anti-crease effects of FAP were better than those of the new synthesized agents. However, the new synthesized agents have the advantage of water solubility and low cost. The fabric treated with new synthesized agents presented satisfactory WRA and TSR, indicating that AC-DABS1 and AC-DABS2 can be utilized as effective alkaline crosslinking agents. In addition, the different performance of the FAP-treated fabric and fabric treated with the new synthesized agents was illustrated by the HPLC method.

The restriction of Yin Yang 1 (YY1) at BRCA2 and CDKN1A/p21-interacting protein (BCCIP) transcriptional start site (TSS) proximal region in several human cancer cell lines was found by analyzation of ChIP-Seq database from UCSC Genome Browser (http://genome.ucsc.edu). However, whether the stabilization of YY1 by BCCIP impacts its recruitment in the BCCIP promoter region is unclear. Here, we present evidence that transcriptional regulation of YY1 on BCCIP is closely related to YY1 stability in HCT116 human colon cancer cells. YY1 stabilization was in turn regulated by BCCIP, suggesting the existence of a BCCIP-YY1 feedback loop in regulating BCCIP transcription by the YY1. Overexpression of BCCIP stabilized YY1 while knockdown of BCCIP reduced YY1 protein level. In addition, direct interaction between YY1 and BCCIP was confirmed by coimmunoprecipitation approach. Also, the N-terminus region of BCCIP, including the internal conserved domain (ICD), was responsible for binding with the amino acid 146-270 of YY1. More importantly, YY1 stability was related to the BCCIP/ICD domain-mediated YY1 ubiquitination pathway. Moreover, a limited BCCIP promoter region containing YY1 binding site (CCGCCATC) was tightly associated with the pGL4-BCCIP-Luc luciferase activity. In ChIP assays, shBCCIP lentiviral-mediated YY1 instability decreased recruitment of the YY1 at BCCIP TSS proximal region, which could not be restored by YY1 overexpression. Furthermore, knockdown of YY1 inhibited the binding of BCCIP itself at BCCIP promoter region proximal to TSS, demonstrating that transcriptional regulation of the YY1 on BCCIP can be modulated by BCCIP itself in a YY1-dependent fashion.

The chemical heat sink of endothermic hydrocarbon fuels (EHFs) is generally dependent on its thermal cracking in the cooling channel, which is accompanied and limited by the formation of carbon deposit. In this work, HF-1 (a kerosene-based EHF) was electrically heated in the rectangular, square, and circular channels with the same cross-sectional area under 3.5 MPa to study the effect of cooling channel geometric structures on the thermal cracking and carbon deposition behaviors. It was found that under similar conditions (inlet flow rate of fuel, pressure, outlet temperature), conversions of HF-1 in both rectangular and square channels were slightly higher than that in the circular one with high selectivity to methane but lower selectivities to the primary cracking products (such as 1-hexene and 1-heptene, etc.). In addition, more carbon deposits were formed in the rectangular and square channels, especially around the corners of channels. Based on the CFD simulation, the possible reasons should be ascri...

Background Global disparities in prostate cancer (PCa) incidence highlight the urgent need to identify genomic abnormalities in prostate tumors in different ethnic populations including Asian men. Objective To systematically explore the genomic complexity and define disease-driven genetic alterations in PCa. Design, setting, and participants The study sequenced whole-genome and transcriptome of tumor-benign paired tissues from 65 treatment-naive Chinese PCa patients. Subsequent targeted deep sequencing of 293 PCa-relevant genes was performed in another cohort of 145 prostate tumors. Outcome measurements and statistical analysis The genomic alteration landscape in PCa was analyzed using an integrated computational pipeline. Relationships with PCa progression and survival were analyzed using nonparametric test, log-rank, and multivariable Cox regression analyses. Results and limitations We demonstrated an association of high frequency of CHD1 deletion with a low rate of TMPRSS2-ERG fusion and relatively high percentage of mutations in androgen receptor upstream activator genes in Chinese patients. We identified five putative clustered deleted tumor suppressor genes and provided experimental and clinical evidence that PCDH9, deleted/loss in approximately 23% of tumors, functions as a novel tumor suppressor gene with prognostic potential in PCa. Furthermore, axon guidance pathway genes were frequently deregulated, including gain/amplification of PLXNA1 gene in approximately 17% of tumors. Functional and clinical data analyses showed that increased expression of PLXNA1 promoted prostate tumor growth and independently predicted prostate tumor biochemical recurrence, metastasis, and poor survival in multi-institutional cohorts of patients with PCa. A limitation of this study is that other genetic alterations were not experimentally investigated. Conclusions There are shared and salient genetic characteristics of PCa in Chinese and Caucasian men. Novel genetic alterations in PCDH9 and PLXNA1 were associated with disease progression. Patient summary We reported the first large-scale and comprehensive genomic data of prostate cancer from Asian population. Identification of these genetic alterations may help advance prostate cancer diagnosis, prognosis, and treatment.

This paper studies the dual-side event-triggered output feedback H∞ control for networked control system with network-induced delays. Unlike continuous-time event-triggered mechanism (ETM) or state-dependent ETM, the discrete dual-side ETMs are firstly proposed by using plant output and controller output, respectively, which effectively reduce transmission rate of sampled data in both sensor-to-controller and controller-to-actuator channels. Then, the closed-loop system is modelled as a time-delay system, which characterizes effects of the dual-side ETMs and networked-induced delays in a unified framework. Based on the system model, asymptotic stability criterion satisfying H∞ performance is derived, and conservatism is reduced by the delay decomposition method and reciprocally convex approach. Moreover, a co-design scheme is presented to design the dual-side ETMs and controller simultaneously, which is more convenient than two-step design method requiring controllers to be given a priori. Finally, examples confirm effectiveness of the proposed method.

The partial bleaching of the luminescence signal prior to deposition results in age overestimation, and can be a problem in delineating fluvial evolution within an OSL chronological framework. The Inner Mongolian reaches of the Yellow River are characterised by a high sediment load and complex sources of sediments. To test the incomplete bleaching occurring in this type of environment, the residual doses and the luminescence signal characteristics of different particle size fractions from 14 modern fluvial sediment samples were investigated. Furthermore, 26 OSL ages derived from drilling cores were compared with 11 radiocarbon ages. Our results show that the residual equivalent doses principally range between 0.16 and 0.49 Gy for silt grains, and between 0.35 and 3.72 Gy for sand grains of modern samples. This suggests that medium-grained quartz has been well bleached prior to deposition, and is preferable to coarse-grained quartz when dating fluvial sediments in this region. The results also show that the De values of coarse-grained fractions display a stronger correlation with distance downstream. In addition, a comparison of OSL and radiocarbon ages from drilling cores establishes further confidence that any initial bleaching of these sediments was sufficient. As a result, we believe that the studied fluvial samples were well bleached prior to deposition.

High-voltage circuit breakers are important protection and control equipment in power systems. In order to understand the mechanical characteristics of vacuum circuit breaker, the mathematical relationship between the released energy of closing spring, the stored energy of opening spring and overtravel spring and the rotation angle of output crank arm is studied. The characteristic curve between the released energy of closing spring and the rotation angle of output crank arm and the characteristic curve between the stored energy of opening spring and overtravel spring and the rotation angle of output crank arm are drawn by MATLAB. In order to improve the matching of energy release and energy storage characteristic curves, a method of improving cam profile is proposed. The dynamics simulation model of spring operating mechanism of high voltage circuit breaker is established and the original cam and adjusted cam are imported into the dynamics simulation model of mechanism. The simulation results show that the adjusted cam improves the closing speed of vacuum circuit breaker. This helps to reduce the stress on the parts of the vacuum circuit breaker and increase the service life of the vacuum circuit breaker.

Background and aims Inflammation, particularly innate immunity, plays an important role in cardiovascular diseases. The aim of this study was to investigate whether atherogenic determinants such as oxidized LDL modulate the phenotype of eosinophils. Methods Cultured eosinophils were treated with oxidized LDL and the expression of selective inflammatory and anti-inflammatory cytokines was determined. In addition, the eosinophil receptor and signaling that mediate these events were identified. Results Treatment of cultured eosinophils with oxidized LDL (Ox-LDL) specifically induced the expression of IFNα and IFNβ without affecting expression of other proinflammatory cytokines, such as TNFα, IL-1β, and IL-6. In macrophages, Ox-LDL downregulated expression of both IFNα and IFNβ, suggesting that the effect of Ox-LDL on the expression of type I interferons is specific to eosinophils. Furthermore, we noted that eosinophils constitutively expressed IL-4 and IL-13, and Ox-LDL markedly downregulated their expression. Analysis of Ox-LDL signaling revealed that eosinophils constitutively expressed SRB2, CD36, and CD68 scavenger receptors, and Ox-LDL markedly induced the expression of CD36. Further analysis of CD36 signaling by siRNA and neutralizing antibodies showed that the induction of type I IFN by Ox-LDL is mediated by CD36 signaling whereas downregulation of IL-4 is independent of CD36 activation. We further showed that peritoneal macrophages treated with condition medium collected from Ox-LDL treated eosinophils markedly induced the expression of M1 markers such as iNOS, IL6, SOSC3 and TNFα whereas the condition medium from non-treated eosinophils significantly induced expression of M2 markers like ARG1 and CCL24. Conclusions Our data suggest that an atherogenic condition could activate eosinophils and modulate the phenotype of macrophages (from M2 to M1 phenotype), in part, through the CD36 receptor signaling.

Insights into reaction mechanism were vital to direct naphtha catalytic cracking process to produce light olefins. In order to reveal influences of reaction pathways modulation on light olefins production, Zr-ZSM-5, Ag-ZSM-5, and the regenerated HZSM-5 (ZSM-5(R2)) were prepared and employed in n -pentane catalytic cracking. It was found that light olefins yield obtained over Zr-ZSM-5, Ag-ZSM-5, and ZSM-5(R2) at 500 °C was 58%, 81%, and 113% higher than that over the parent HZSM-5 (12.0%), respectively. Promotion on light olefins production caused by Zr-incorporation can be attributed to the enhancement of hydride transfer reactions increasing the utilization of Bronsted acid sites and the catalytic activity accompanied with the proximate stability compared to the parent HZSM-5. Different from Zr-ZSM-5, Ag-ZSM-5 and ZSM-5(R2) respectively introduced dehydrogenation cracking and redox cracking to n -pentane catalytic cracking, which selectively promoted the formation of light olefins and significantly enhanced n -pentane protolytic cracking. However, both Ag-ZSM-5 and ZSM-5(R2) went through a rapid deactivation at 550 °C, which was probably due the selective enhancement of alkenes accelerating the side reactions to coke formation.

Both chronic Obstruction Pulmonary Disease (COPD) and lung cancer are leading causes of death globally. Although COPD and lung cancer coexist frequently, it is unknown whether lung cancer patients with COPD harbor distinct genomic characteristics compared to those without COPD. In this study, we retrospectively analyzed genomic sequencing data from 272 patients with lung adenocarcinoma (LUAD) and compared the genetic alterations in LUAD patients with and without COPD. Integrative analysis of whole-genome and exome sequencing data revealed that COPD and non-COPD groups showed high concordance in mutational burden and spectra. Notably, we also found that EGFR mutations were more prevalent in LUAD patients without COPD, whereas mutated LRP1B was more frequently observed in LUAD patients with COPD. In addition, multi-variable analysis with logistic regression demonstrated that mutation of LRP1B was a predictive marker for the presence of COPD in the patients with LUAD. Our analysis demonstrated for the first time the high concordance in genomic alterations between the tumors from LUAD patients with and without COPD. We also identified higher prevalence of LRP1B among the LUAD patients with COPD, which might help understand the underlying mechanisms which link COPD and lung cancer.

In comparison with traditional point forecasting method, probability density forecasting can reflect the load fluctuation more effectively and provides more information. This paper proposes a hybrid hourly power load forecasting model, which integrates K-means clustering algorithm, Salp Swarm Algorithm (SSA), Least Square Support Vector Machine (LSSVM), and kernel density estimation (KDE) method. Firstly, the loads at 24 times a day are grouped into three categories according to the K-means clustering algorithm, which correspond to the valley period, flat period, and peak period of the load, respectively. Secondly, the load point forecasting value is obtained by LSSVM method optimized by SSA algorithm. Furthermore, the kernel density estimation method is employed to fit the forecasting error of SSA-LSSVM in different time periods, and the probability density function of the error distribution is obtained. The final load probability density forecasting result is obtained by combining the point forecasting value and the error fitting result, and then the upper and lower limits of the confidence interval under the given confidence level are solved. In this paper, the performance of the model is evaluated by two indicators named interval coverage and interval average width. Meanwhile, in comparison with several other models, it can be concluded that the proposed model can effectively improve the forecasting effect.

Somatic mosaicism is widespread among tissues and could indicate distinct tissue origins of circulating cell-free DNA (cfDNA), DNA fragments released by lytic cells into the blood. By investigating the alignment patterns of whole genome sequencing reads with the genomic DNA of different tissues, we found that the read distributions formed type-specific patterns in some regions as a result of somatic mosaicism. We then utilized this information to construct a tissue-of-origin mapping model and evaluated its predictive performance on whole genome sequencing data from tissue and cfDNA samples. In total, 1,545 tissue samples associated with 13 cancer types were included, and identification of the tissue of origin achieved a specificity of 82% and a sensitivity of 80%. Furthermore, a total of 30 cfDNA samples from lung cancer and liver cancer patients and healthy controls were analyzed to predict their tissues of origin with a specificity of 87% and a sensitivity of 87%. Our results show that read distribution patterns from whole genome sequencing could be used to identify cfDNA tissues of origin with high accuracy, suggesting the potential application of our model to early cancer detection and diagnosis.

The distinct molecular subtypes of lung cancer are defined by monogenic biomarkers, such as EGFR, KRAS, and ALK rearrangement. Tumor mutation burden (TMB) is a potential biomarker for response to immunotherapy, which is one of the measures for genomic instability. The molecular subtyping based on TMB has not been well characterized in lung adenocarcinomas in the Chinese population. Here we performed molecular subtyping based on TMB with the published whole exome sequencing data of 101 lung adenocarcinomas and compared the different features of the classified subtypes, including clinical features, somatic driver genes, and mutational signatures. We found that patients with lower TMB have a longer disease-free survival, and higher TMB is associated with smoking and aging. Analysis of somatic driver genes and mutational signatures demonstrates a significant association between somatic RYR2 mutations and the subtype with higher TMB. Molecular subtyping based on TMB is a potential prognostic marker for lung adenocarcinoma. Signature 4 and the mutation of RYR2 are highlighted in the TMB-High group. The mutation of RYR2 is a significant biomarker associated with high TMB in lung adenocarcinoma.

Owing to the implementation of increasingly stringent water conservation policies and regulations, the pulp and paper mill industry must make increased efforts to meet the limits for pollutant emissions. The primary pretreatment and secondary biochemical treatment methods used currently generally fail to meet the country-specific environmental regulations, and the wastewater must be processed further even after being subjected to secondary biochemical treatments. In this work, we synthesized Fe3O4/MnO2 nanocomposites (FMNs) with a flower-like structure for use in the heterogeneous photocatalytic treatment of biotreated papermaking wastewater. FMNs1.25, which were formed using a KMnO4/Fe3O4 molar ratio of 1.25, could be separated readily using an external magnetic field and exhibited higher photocatalytic activity than those of the other samples as well as MnO2 and Fe3O4. The effects of various experimental parameters on the photocatalytic activity of FMNs1.25, including the initial pH of the wastewater and the catalyst dosage, were determined. The common chemical oxygen demand (CODCr) reduction rate in the case of this sample reached 56.58% within 120 min at a pH of 3, the CODCr of effluent after treatment was 52.10 mg/L. Further, even under neutral conditions, the CODCr of the treated effluent was below the current limit for discharge in China. Moreover, the nanocomposites exhibited good recyclability, and their catalytic activity did not decrease significantly even after five usage cycles. This study should serve as a platform for the fabrication of effective photocatalysts for the advanced treatment of biotreated papermaking effluent and refractory organic wastewater.

In this paper, we proposed a Ka-band single-chip Transceiver MMIC based on GaAs PHEMT process. In the first, A Ka-band low phase noise PHEMT voltage controlled oscillator and a medium power amplifier were design. The presented MMIC delivers a typical transmit power of 14dBm at the center frequency of 36.5GHz with a tuning range of more than 2GHz. The close-to-carrier phase noise is shown to be around −70dBc/Hz at an offset of 10kHz for maximum output-power conditions. The receiver gain is 15dB by employing a less than 2.0dB noise figure current-reused LNA and a double balanced mixer. The transceiver MMIC also employs on-chip power splitter and low pass filter. A compact layout was optimized and the chip size is only $2.9\text{mm}\times 1.8\text{mm}$ . The current consumption is 115mA with a single +5V supply power. This transceiver MMIC is very conveniently for FMCW application cooperating with signal processing circuits.

Transactivation of p21 (cyclin-dependent kinase inhibitor 1A, CDKN1A) is closely related to the recruitment of transcription cofactors at the p53 responsive elements (p53REs) in its promoter region. Human chromatin remodeling enzyme INO80 can be recruited to the p53REs of p21 promoter and negatively regulates p21. As one of the key subunits of the INO80 complex, YY1 has also been confirmed to bind to the p53RE sites of p21 promoter. Importantly, YY1 was recently reported to be bound and stabilized by BCCIP (BRCA2 and CDKN1A-interacting protein). Therefore, we hypothesized that the YY1/BCCIP complex plays an important role in regulating the transactivation of p21. Here we present evidence that the YY1/BCCIP complex coordinatively regulates p53RE-mediated p21 transactivation. We first confirmed the cross-interaction between YY1, BCCIP, and p53, suggesting an intrinsic link between three proteins in the regulation of p21 transcription. In dual luciferase assays, YY1 inhibited p53RE-mediated luciferase activity, whereas BCCIP revealed the opposite effect. More interestingly, the region 146&ndash, 270 amino acids of YY1, which bound to BCCIP, increased p53-mediated luciferase activity, indicating the complexity of the YY1/BCCIP complex in co-regulating p21 transcription. Further in-depth research confirmed the co-occupancy of YY1/BCCIP with p53 at the p53RE-proximal region of p21. Lentiviral-mediated knockdown of BCCIP inhibited the recruitment of p53 and YY1 at the p53RE proximal region of p21, however, this phenomenon was reversed by expressing exogenous YY1, suggesting the collaborative regulation of YY1/BCCIP complex in p53RE-mediated p21 transcription. These data provide new insights into the transcriptional regulation of p21 by the YY1/BCCIP complex.

This study aims to investigate the level of DNA damage in high iodine (HI)-induced autoimmune thyroiditis (AIT), and to explore the role of DNA repair protein MutT homolog-1 (MTH1) in this process. The levels of pro-inflammatory cytokines tumor necrosis factor (TNF)-α, interleukin (IL)-6, and IL-8 were measured using qRT-PCR and ELISA. The apoptosis was evaluated using TUNEL staining. The pathological changes of thyroid tissues were evaluated using hematoxylin and eosin (HE) staining. The DNA damage was assessed by determining the expression of 8-hydroxy-2'deoxyguanosine (8-OHdG; an indicator of oxidative DNA damage) and performing the Comet assay. Our results showed that both the HI-treated NOD.H-2h4 mice (experimental AIT mice) and the HI-treated mouse thyroid follicular epithelial cells showed enhanced inflammation, apoptosis, and DNA damage level, accompanied by decreased MTH1 expression. Importantly, overexpression of MTH1 effectively abrogated the HI-induced enhancement of inflammation, apoptosis, and DNA damage in mouse thyroid follicular epithelial cells. In conclusion, HI treatment induces DNA damage in AIT, at least in part, by inhibiting the DNA repair protein MTH1.

Although PCV2 infections generally cause mild disease in pigs, concurrent co-infections with other pathogens can damage the immune system and cause more severe diseases, collectively termed porcine circovirus associated diseases (PCVAD). Involvement of porcine parvovirus (PPV, a common cause of reproductive failure in naïve dams) in PCVAD caused by PCV2, has been reported. As this co-infection can be difficult to eliminate, there is a critical need to develop an effective vaccine to protect against PPV or synergistic effects of PCV2 and PPV under field conditions. In this study, we designed chimeric PCV2 virus-like particles (cVLPs) displaying a B-cell epitope derived from PPV1 structural protein around the surface of the 2-fold axes of PCV2 VLPs, based on 3D-structure analysis of the PCV2 capsid. The cVLPs were successfully prepared, verified by transmission electron microscopy and chromatography, with robust antibody titers against PCV2 and PPV1 produced in mice and guinea pigs. In addition, in guinea pigs challenged with 10

Background: Subacute thyroiditis (SAT) is a self-limited disease commonly treated with prednisolone (PSL). The present study aimed to assess the effectiveness and safety of the new treatment protocol which consisted of PSL and Prunella vulgaris (PV) to reduce the dosage and incidence of side effects from PSL. Methods: Data regarding the patients with SAT treated at the First Affiliated Hospital, School of Medicine, Zhejiang University between September 2013 and May 2016 were retrospectively analyzed. Patients treated with PSL only or a combination of PSL and PV were divided into two groups. Results: In total, 87 patients were included. Patients treated with PSL and PV showed a similar remission rate to the patients who received only PSL. The recurrence rate (4.4% vs . 9.5%) and incidence of transient hypothyroidism (2.2% vs . 4.8%) were similar between the two groups (P=0.350 and P=0.517, respectively). Only two cases of a mild skin rash were recorded, and these were related to the use of PV. Conclusions: The combination of low-dose PSL as a treatment choice for SAT was both effective and safe.

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Intimately coupled photocatalysis and biodegradation (ICPB) provides novel insights into the removal of refractory pollutants. However, the practical application of ICPB was limited by low bacterial loading density and low microbial activity. Herein, an environment-friendly, low-cost and renewable biocarrier was fabricated using natural loofah sponge. In comparison to polyurethane carrier, after employing loofah sponge in ICPB, the tetracycline hydrochloride (TCH) removal rate was increased by ∼6.6 %, the mineralization was increased by ∼9.2 %, and almost all photocatalytic products were degraded. Compared with conventional catalyst coating strategies, our powder spraying method enables the exterior surface of biocarrier to be firmly coated by the photocatalyst, while the inside of biocarrier was extremely clean to accumulate bacteria. The biocarrier provided a higher loading density and a higher microbial activity of bacteria than that of polyurethane carrier. Besides, it can regulate the bacterial community to have more favorable members to biodegrade the photocatalysis intermediates. In summary, using loofah sponge as biocarrier could be an effective approach for enhancing the biodegradation performance of ICPB.

To elucidate the molecular mechanisms underlying the therapeutic activity of ginsenoside Rg3 (Gs-Rg3) in the context of hepatocellular carcinoma (HCC). Methods Relevant databases were searched to identify protein targets that were both dysregulated and implicated in HCC, as well as targeted by Gs-Rg3. Generation of a protein-protein interaction network facilitated the selection of connected nodes for the construction of a shared disease- and drug-target interaction network model, and topological analysis identified the most highly connected nodes. Targets were annotated with their associated Gene Ontology terms, followed by Kyoto Encyclopedia of Genes and Genomes biological pathway enrichment analysis. In vitro experiments using 2 hours CC cell lines (Bel-7402 and HCCLM3) were performed to investigate the impact of Gs-Rg3 on cell proliferation, viability, cell cycle, cyclin D1 and sirtuin 2 (SIRT2) levels, and global cellular histone acetylation (specifically H3K18ac and H4K16ac). Results Network pharmacology suggested that Gs-Rg3 synergistically targets multiple proteins and pathways relevant to HCC pathogenesis, including those involved in cell cycle and proliferation. In vitro experiments confirmed that Gs-Rg3 dose-dependently inhibits cell proliferation and viability; induces G1 phase cell cycle arrest; decreases cyclin D1, cyclin-dependent kinase 2 (CDK2), and SIRT2 levels; and enhances global H3K18ac and H4K16ac. Conclusions Hypotheses derived from the network analysis were confirmed in vitro. Gs-Rg3 induces G1 phase cell cycle arrest, concomitant with decreased cyclin D1 and CDK2 levels, suggesting a possible mechanism for inhibiting proliferation. In addition, Gs-Rg3 decreases SIRT2 levels, concomitant with enhanced global H3K18ac and H4K16ac. These findings provide a theoretical basis and a support for further preclinical study of the safety and antineoplastic molecular mechanisms of Gs-Rg3, with the goal of eventual clinical translation.