484 results on '"Fu, Ziyi"'
Search Results
202. Promotion of Melanoma Cell Invasion and Tumor Metastasis by Microcystin-LR via Phosphatidylinositol 3-Kinase/AKT Pathway
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Xu, Pengfei, primary, Zhang, Xu-Xiang, additional, Miao, Chen, additional, Fu, Ziyi, additional, Li, Zhengrong, additional, Zhang, Gen, additional, Zheng, Maqing, additional, Liu, Yuefang, additional, Yang, Liuyan, additional, and Wang, Ting, additional
- Published
- 2013
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203. Iterative learning control for a class of non‐linear switched systems
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Bu, Xuhui, primary, Hou, Zhongsheng, additional, Yu, Fashan, additional, and Fu, Ziyi, additional
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- 2013
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204. Stability Analysis of High-Order Iterative Learning Control for a Class of Nonlinear Switched Systems
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Bu, Xuhui, primary, Yu, Fashan, additional, Fu, Ziyi, additional, and Wang, Fuzhong, additional
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- 2013
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205. Comprehensive profiling of biological processes reveals two major prognostic subtypes in breast cancer.
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Chen, Fei, Gao, Sheng, Wang, Fengliang, Ma, Jingjing, Zhang, Min, Lv, Mingming, Zhou, Qian, Fu, Ziyi, Lu, Cheng, and Yin, Hong
- Abstract
Heterogeneity is the major obstacle to breast cancer target therapy. Classification of breast cancer with significant biological process may reduce the influence of heterogeneity of intrinsic tumor. We used survival analysis to filter 95 gene sets and classify 638 breast cancer samples into two subtypes based on those gene sets associated with prognosis. Clinical outcome of two subtypes were evaluated with disease-free survival, distant metastasis-free survival, and overall survival levels in three databases and ER+, PR+ HER2+, and TNBC groups. We established a novel classification with 95 prognostic gene sets. In the training and validation cohorts, the subtype 1 was characterized by significant gene sets associated with regulation of metabolic process and enzyme activity and predicted obviously improved clinical outcome than subtype 2, which was enriched by tumor cell division, mitosis, and cell cycle-related gene sets ( P < 0.05). When evaluated prognostic impact of subtypes in ER+, PR+ HER2+, and TNBC groups, we found that patients in subtype 1 showed better prognosis in ER+ and PR+ groups ( P < 0.05) but had no difference from prognosis of subtype 2 in HER2+ and TNBC groups. These findings may have implications in understanding of breast cancer and filtering effective therapeutic strategies for targeted therapy. [ABSTRACT FROM AUTHOR]
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- 2016
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206. Microcystin-LR Promotes Melanoma Cell Invasion and Enhances Matrix Metalloproteinase-2/-9 Expression Mediated by NF-κB Activation
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Zhang, Xu-Xiang, primary, Fu, Ziyi, additional, Zhang, Zongyao, additional, Miao, Chen, additional, Xu, Pengfei, additional, Wang, Ting, additional, Yang, Liuyan, additional, and Cheng, Shupei, additional
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- 2012
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207. A Novel Dynamic Bandwidth Allocation Algorithm with Correction-based the Multiple Traffic Prediction in EPON
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Fu, Ziyi, primary, Bai, Juanjuan, additional, and Wang, Qiang, additional
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- 2012
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208. Research of Multirate Variable Sampling Period Optimization Strategy Based on Time-Delay Prediction.
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Fu, Ziyi, Li, Xing, and Yang, Guangcan
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- 2014
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209. Reversible Sketch Based on the XOR-Based Hashing
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Feng, Wenfeng, primary, Zhang, Zhibin, additional, Jia, Zongpu, additional, and Fu, Ziyi, additional
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- 2006
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210. Stoichiometry Dependence of Physical and Electrochemical Properties of the SnO x Film Anodes Deposited by Pulse DC Magnetron Sputtering.
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Ma, Yibo, Zhang, Xiaofeng, Liu, Weiming, Wei, Youxiu, Fu, Ziyi, Li, Jiuyong, Zhang, Xuan, Peng, Jingjing, Yan, Yue, and Dorner-Reisel, Annett
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MAGNETRON sputtering ,DC sputtering ,STOICHIOMETRY ,REACTIVE sputtering ,X-ray photoelectron spectroscopy ,X-ray reflection - Abstract
A batch of Sn oxides was fabricated by pulse direct current reactive magnetron sputtering (pDC−RMS) using different Ar/O
2 flow ratios at 0.3 Pa; the influence of stoichiometry on the physical and electrochemical properties of the films was evaluated by the characterization of scanning electron microscope (SEM), X-ray diffraction (XRD), X-ray reflection (XRR), X-ray photoelectron spectroscopy (XPS) and more. The results were as follows. First, the film surface transitioned from a particle morphology (roughness of 50.0 nm) to a smooth state (roughness of 3.7 nm) when Ar/O2 flow ratios changed from 30/0 to 23/7; second, all SnOx films were in an amorphous state, some samples deposited with low O2 flow ratios (≤2 sccm) still included metallic Sn grains. Therefore, the stoichiometry of SnOx calculated by XPS spectra increased linearly from SnO0.0.08 to SnO1.71 as the O2 flow ratios increased, and the oxidation degree was further calibrated by the average valence method and SnO2 standard material. Finally, the electrochemical performance was confirmed to be improved with the increase in oxidation degree (x) in SnOx , and the SnO1.71 film deposited with Ar/O2 = 23/7 possessed the best cycle performance, reversible capacity of 396.1 mAh/g and a capacity retention ratio of 75.4% after 50 cycles at a constant current density of 44 μA/cm2 . [ABSTRACT FROM AUTHOR]- Published
- 2021
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211. Chemoresistance-related long non-coding RNA expression profiles in human breast cancer cells.
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Huang, Lei, Zeng, Lihua, Chu, Jiahui, Xu, Pengfei, Lv, Mingming, Xu, Juan, Wen, Juan, Li, Wenqu, Wang, Luyu, Wu, Xiaowei, Fu, Ziyi, Xie, Hui, and Wang, Shui
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BREAST cancer ,RNA ,GENE expression - Abstract
A correction is presented to the article "Chemoresistance‑related long non‑coding RNA expression profiles in human breast cancer cells" which was published in a 2019 issue of the periodical.
- Published
- 2019
212. Candidate Oligo Therapeutic Target, miR-330-3p, Induces Tamoxifen Resistance in Estrogen Receptor-Positive Breast Cancer Cells via HDAC4.
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Zhang, Meng, Wang, Mei, Jiang, Zhiming, Fu, Ziyi, Ma, Jingjing, and Gao, Sheng
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REVERSE transcriptase polymerase chain reaction , *BIOCHEMISTRY , *WESTERN immunoblotting , *PHENOMENOLOGICAL biology , *MICRORNA , *GENE expression , *CELL proliferation , *DESCRIPTIVE statistics , *RESEARCH funding , *TAMOXIFEN , *HISTONE deacetylase , *CELL lines , *HORMONE receptor positive breast cancer , *DRUG resistance in cancer cells - Abstract
Tamoxifen is a drug used for treating breast cancer (BC), especially for individuals diagnosed with estrogen receptor-positive (ER+) BC. Its prolonged use could reduce the risk of recurrence and significantly lengthen the survival rate of BC patients. However, an increasing number of patients developed resistance to tamoxifen treatment, which reduced therapeutic efficiency and caused substandard prognosis. Therefore, the exploration of the molecular processes involved in tamoxifen resistance (TR) is urgently required. This investigation aimed to elucidate the relationship of microRNA-330 (miR-330-3p) with the TR of BC. There is little information on miR-330-3p′s link with drug-resistant BC, although it is well known to regulate cell proliferation and apoptosis. Primarily, miR-330-3p expression in parental BC (MCF7/T47D), TR (MCF7-TR), and T47D/TR cell lines was detected by qRT-PCR. Then, the impact of miR-330-3p on the TR of BC cells was assessed by a cell proliferation assay. Lastly, dual-luciferase reporter, qRT-PCR, and western blot assessments were carried out to identify histone deacetylase 4 (HDAC4) as the potential miR-330-3p target gene. The data indicated that miRNA-330 was overexpressed in TR ER+ BC cells and its overexpression could induce TR. Furthermore, miRNA-330 could also reduce the expression of HDAC4, which is closely linked to TR, and overexpression of HDAC4 could reverse miRNA-330-induced drug resistance. In summary, miR-330-3p could induce TR of ER+ BC cells by downregulating HDAC4 expression, which might be a novel marker of TR and a possible treatment target against BC patients who are tamoxifen-resistant. [ABSTRACT FROM AUTHOR]
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- 2023
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213. N4‐Acetylcytidine Drives Glycolysis Addiction in Gastric Cancer via NAT10/SEPT9/HIF‐1α Positive Feedback Loop.
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Yang, Qingbin, Lei, Xuetao, He, Jiayong, Peng, Yanmei, Zhang, Yihao, Ling, Ruoyu, Wu, Chaorui, Zhang, Guofan, Zheng, Boyang, Chen, Xinhua, Zou, Boya, Fu, Ziyi, Zhao, Liying, Liu, Hao, Hu, Yanfeng, Yu, Jiang, Li, Fengping, Ye, Gengtai, and Li, Guoxin
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STOMACH cancer , *NEOVASCULARIZATION inhibitors , *GLYCOLYSIS , *ADDICTIONS , *GLUCOSE metabolism , *APATINIB , *ENDOSTATIN - Abstract
Anti‐angiogenic therapy has long been considered a promising strategy for solid cancers. Intrinsic resistance to hypoxia is a major cause for the failure of anti‐angiogenic therapy, but the underlying mechanism remains unclear. Here, it is revealed that N4‐acetylcytidine (ac4C), a newly identified mRNA modification, enhances hypoxia tolerance in gastric cancer (GC) cells by promoting glycolysis addiction. Specifically, acetyltransferase NAT10 transcription is regulated by HIF‐1α, a key transcription factor of the cellular response to hypoxia. Further, acRIP‐sequencing, Ribosome profiling sequencing, RNA‐sequencing, and functional studies confirm that NAT10 in turn activates the HIF‐1 pathway and subsequent glucose metabolism reprogramming by mediating SEPT9 mRNA ac4C modification. The formation of the NAT10/SEPT9/HIF‐1α positive feedback loop leads to excessive activation of the HIF‐1 pathway and induces glycolysis addiction. Combined anti‐angiogenesis and ac4C inhibition attenuate hypoxia tolerance and inhibit tumor progression in vivo. This study highlights the critical roles of ac4C in the regulation of glycolysis addiction and proposes a promising strategy to overcome resistance to anti‐angiogenic therapy by combining apatinib with ac4C inhibition. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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214. Exosome-Transmitted tRF-16-K8J7K1B Promotes Tamoxifen Resistance by Reducing Drug-Induced Cell Apoptosis in Breast Cancer.
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Sun, Chunxiao, Huang, Xiang, Li, Jun, Fu, Ziyi, Hua, Yijia, Zeng, Tianyu, He, Yaozhou, Duan, Ningjun, Yang, Fan, Liang, Yan, Wu, Hao, Li, Wei, Zhang, Yuchen, and Yin, Yongmei
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NUCLEOTIDE metabolism , *EXOSOMES , *TRANSFER RNA , *APOPTOSIS , *GENE expression , *TUMOR necrosis factors , *RESEARCH funding , *TAMOXIFEN , *PROGRESSION-free survival , *EXTRACELLULAR space , *CELL lines , *DRUG resistance in cancer cells , *BREAST tumors , *CASPASES , *PHARMACODYNAMICS - Abstract
Simple Summary: While the prognosis of hormone receptor-positive (HR+) breast cancer has been significantly improved, tamoxifen resistance remains a challenge in the treatment of HR+ breast cancer. This study identified that tRF-16-K8J7K1B, a novel small ncRNA derived from the 3′-end of tRNAAla-TGC, was highly expressed in tamoxifen-resistant cells compared to parental cells. Moreover, extracellular tRF-16-K8J7K1B confers tamoxifen resistance via incorporation into exosomes and then degrades the expression of apoptosis-related proteins, reducing the proportion of drug-induced cell apoptosis. Therefore, we propose that exosomal tRF-16-K8J7K1B could be a potential predictive biomarker and therapeutic target for overcoming tamoxifen resistance. Tamoxifen resistance remains a challenge in hormone receptor-positive (HR+) breast cancer. Recent evidence suggests that transfer ribonucleic acid (tRNA)-derived fragments play pivotal roles in the occurrence and development of various tumors. However, the relationship between tRNA-derived fragments and tamoxifen resistance remains unclear. In this study, we found that the expression of tRF-16-K8J7K1B was upregulated in tamoxifen-resistant cells in comparison with tamoxifen-sensitive cells. Higher levels of tRF-16-K8J7K1B were associated with shorter disease-free survival in HR+ breast cancer. Overexpression of tRF-16-K8J7K1B promotes tamoxifen resistance. Moreover, extracellular tRF-16-K8J7K1B could be packaged into exosomes and could disseminate tamoxifen resistance to recipient cells. Mechanistically, exosomal tRF-16-K8J7K1B downregulates the expression of apoptosis-related proteins, such as caspase 3 and poly (ADP-ribose) polymerase, by targeting tumor necrosis factor-related apoptosis-inducing ligand in receptor cells, thereby reducing drug-induced cell apoptosis. Therapeutically, the inhibition of exosomal tRF-16-K8J7K1B increases the sensitivity of breast cancer cells to tamoxifen in vivo. These data demonstrate that exosomal tRF-16-K8J7K1B may be a novel therapeutic target to overcome tamoxifen resistance in HR+ breast cancer. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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215. A Real-World Multicentre Retrospective Study of Low-Dose Apatinib for Human Epidermal Growth Factor Receptor 2-Negative Metastatic Breast Cancer.
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Zeng, Tianyu, Sun, Chunxiao, Liang, Yan, Yang, Fan, Yan, Xueqi, Bao, Shengnan, Zhang, Yucheng, Huang, Xiang, Fu, Ziyi, Li, Wei, and Yin, Yongmei
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RESEARCH , *GENETIC mutation , *EPIDERMAL growth factor receptors , *ONCOGENES , *ORAL drug administration , *METASTASIS , *TREATMENT duration , *RETROSPECTIVE studies , *PROTEIN-tyrosine kinase inhibitors , *DESCRIPTIVE statistics , *TUMOR markers , *BREAST tumors , *PHARMACODYNAMICS - Abstract
Simple Summary: There are limited treatments for patients with HER2-negative breast cancer, especially for patients with metastatic breast cancer. This study aimed to observe the efficacy and safety of low-dose apatinib combined with chemotherapy in real-world clinical diagnosis and treatment of HER2-negative metastatic breast cancer. A total of 128 patients were treated with 250 mg apatinib, and we observed the median progression-free survival (PFS) and overall survival (OS) were 4.7 months and 15.3 months, respectively. This observation also indicated that the breast cancer susceptibility gene (BRCA) mutation predicted a better response to apatinib and that combination of immunotherapy or paclitaxel-platinum regimens might be an optimal treatment option. Importantly, a lower dose of apatinib showed mild side effects that improved the patients' life quality. Treatment options for human epidermal growth factor receptor (HER2)-negative breast cancer patients are limited in comparison to the HER2-positive patients, particularly for metastatic breast cancer patients. Apatinib is a small-molecule tyrosine kinase inhibitor that targets the vascular endothelial growth factor receptor 2 (VEGFR-2). Here, we reported the apatinib-based therapy data in HER2-negative metastatic breast cancer. Apatinib was taken at a dose of 250 mg orally once per day and combined with standard chemotherapy regimens. The PFS and OS of 128 patients were 4.7 months and 15.3 months, respectively. The objective response rate (ORR) and the disease control rate (DCR) were 22.7% and 80.5%, respectively. Patients with breast cancer susceptibility gene (BRCA) mutations were found to have a longer PFS and OS. Moreover, combination immunotherapy or paclitaxel-platinum regimens shared an improved response to other regimens. Most of the adverse effects (hypertension, anaemia, and hand-foot syndrome) were grade 1 to 2. Metastatic breast cancer patients could benefit from apatinib therapy at a low dosage, and the adverse effects are mild in real-world clinical practice. Furthermore, BRCA may be a putative biomarker for apatinib in HER2-negative breast cancer. Immunotherapy or paclitaxel-platinum regimens may be recommended to combine with apatinib therapy. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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216. Identification of microRNA expression profiles of CD44+ ovarian cancer stem cells.
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Wang, Luyao, Zhi, Xiaogai, Lu, Yingying, Cong, Yu, Fu, Ziyi, Cao, Jian, Xu, Sujuan, Lv, Juan, and Ruan, Hongjie
- Abstract
Purpose: The aim of our study was to investigate microRNA (miRNA) expression profiles in CD44+ ovarian cancer stem cells (ovarian CSCs). Methods: In this study, we enriched CD44+ ovarian CSCs using magnetic activated cell sorting (MACS). A combination of real-time quantitative PCR (qRT-PCR), western blot and sphere formation assays was used to demonstrate stem cell-like properties. RNA sequencing was used to detect the miRNA expression profiles in CD44+ ovarian CSCs. Transient transfection, qRT-PCR, western blot and sphere formation assays were further used to test the function of miR-181a-2-3p. Results: We found that CD44+ ovarian CSCs showed enhanced sphere formation and expression of stemness-associated genes (NANOG, OCT4, SOX2) compared to ovarian cancer cells. The RNA sequencing results showed that the miRNA expression profiles of CD44+ ovarian CSCs were different from those of ovarian cancer cells. GO and KEGG pathway analyses indicated that these miRNAs regulate stem cell-like properties in CD44+ ovarian CSCs. In addition, miR-181a-2-3p negatively regulates the stem cell-like properties of CD44+ ovarian CSCs by targeting EGR1. Conclusion: Our data suggest that miRNAs play important roles in regulating the stem cell-like properties of CD44+ ovarian CSCs. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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217. Molecular Dynamics Simulation of CO2 Hydrate Growth and Intermolecular Weak Interaction Analysis.
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Jing, Xianwu, Chen, Lili, Liu, Youquan, and Fu, Ziyi
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MOLECULAR dynamics , *INTERMOLECULAR interactions , *CARBON dioxide , *AQUEOUS solutions , *HYDROGEN bonding - Abstract
The growth of carbon dioxide (CO2) hydrate in CO2 aqueous solution (box A), and in CO2 aqueous solution with structure I (sI) CO2 hydrate cell as seed (box B) under the same conditions of 275 K and 10 MPa, were simulated respectively. The total simulation time is 5000 ns. The nucleation process is very slow, so it is difficult to observe CO2 hydrate growth in box A without CO2 hydrate seed, CO2 just accumulates to form bubbles, while H2O still remains liquid, the F4 order parameter remains about –0.1. By contrast, beautiful CO2 hydrate in box B grows rapidly, CO2 is trapped in the cages formed by H2O molecules, F4 rises from 0.12 to 0.7 due to the formation of sI hydrate. The density of CO2 hydrate in box B is as high as 1.25 g/cm3, higher than that of seawater, which is beneficial to its permanent sealing on the seabed. In box B, in accordance with the independent gradient model based on Hirshfeld partition (IGMH) analysis, a H2O molecule forms four hydrogen bonds with surrounding H2O molecules, CO2 only has van der Waals interaction with surrounding water cages. In the actual large-scale CO2 storage process, especially for the rapid storage of CO2 in the form of hydrate, it is strongly recommended to pre-add CO2 hydrate crystals into the solution to achieve the purpose of rapid growth of CO2 hydrate. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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218. Stimulation effect of microcystin-LR on matrix metalloproteinase-2/-9 expression in mouse liver
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Zhang, Xu-Xiang, Zhang, Zongyao, Fu, Ziyi, Wang, Ting, Qin, Wendi, Xu, Lizhi, Cheng, Shupei, and Yang, Liuyan
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MICROCYSTINS , *METALLOPROTEINASES , *LABORATORY mice , *LIVER diseases , *ALGAL blooms , *METASTASIS , *ENVIRONMENTAL health , *PHOSPHORYLATION - Abstract
Abstract: In order to investigate the potential effects of microcystin-LR (MC-LR) on the expression of metalloproteinases (MMPs), Mice were orally administered with MC-LR in drinking water (0, 1, 40 and 80μg/L) for 180d, and hepatic MMP-2/-9 expression was evaluated at the levels of enzyme activity, protein level and mRNA expression. Histopathologic observation showed the obvious hepatic lymphocyte infiltration and fatty degeneration in the mice exposed to 40 and 80μg/L MC-LR. Immunohisto-chemical staining and enzyme-linked immunosorbent assay (ELISA) revealed that excess MMP-2/-9 proteins were produced in livers of the mice exposed to MC-LR at the higher concentrations. Hepatic MMP-9 level was elevated from 0.6ng/g liver weight in control to 1.4ng/g liver weight in 80-μg/L group, but a slight increase was found for MMP-2 level. Real time PCR showed that MMP-2/-9 mRNA expression was up-regulated by 6.9 fold and 5.0 fold after 80-μg/L-MC treatment, respectively. MMP-2/-9 expression showed a good dose-dependent manner at both protein and mRNA levels. ELISA demonstrated that MC-LR stimulated phosphorylation of mitogen-activated protein kinases, a potential signal transduction pathway of the MMP-2/-9 expression alteration. This study revealed a significant alteration in hepatic MMP-2/-9 expression induced by MC-LR, which might be involved in cell invasion and metastasis. [ABSTRACT FROM AUTHOR]
- Published
- 2010
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219. Nonmetastatic breast cancer patients subsequently developing second primary malignancy: A population‐based study.
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Bao, Shengnan, Jiang, Mengping, Wang, Xi, Hua, Yijia, Zeng, Tianyu, Yang, Yiqi, Yang, Fan, Yan, Xueqi, Sun, Chunxiao, Yang, Mengzhu, Fu, Ziyi, Huang, Xiang, Li, Jun, Wu, Hao, Li, Wei, Tang, Jinhai, and Yin, Yongmei
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BREAST cancer , *SECONDARY primary cancer , *CANCER patients , *PROGNOSIS , *MEDICAL personnel - Abstract
Background: With life span extending, breast cancer (BC) survivors may face the possibility of developing second primary cancer (SPC) and considerably shorten survivorship. However, little is known about multiple primary cancer (MPC) patients with nonmetastatic breast cancer as a first primary malignancy (BCFPM). Methods: Here, we retrospectively analyzed data on cancer survivors with BCFPM diagnosed between 2010 and 2015 from the Surveillance, Epidemiology, and End Results (SEER) database. The prognostic factors for breast cancer‐specific survival (BCSS) were ascertained by the stepwise regression analysis and a competing risk model, and were integrated to the establishment of prognostic nomogram, of which the accuracy was measured by the calibration curve and the concordance index (C‐index). Results: In total, 8616 patients were identified with 4.6% of 3‐year breast cancer‐ specific death (BCSD) and 8.6% of 5‐year BCSD. The most common SPC among BCFPM patients were female BC and lung cancer. Besides, the median latency time between BC and SPC was 22 months. At a ratio of 7:3, all patients were randomly categorized into a training cohort (n = 6032) and a validation cohort (n = 2584). By a proportional subdistribution hazards regression analysis, the following factors were considered to own independent prognostic abilities of BCSS: subtypes, grade, T classification, N classification, radiation, and sites of SPC. The nomogram could accurately predict 3‐year and 5‐year breast cancer‐associated survival of BCFPM patients with high internal and external validated C‐index, 0.715 (95% CI, 0.691–0.739), and 0.683 (95% CI, 0.642–0.724), respectively. Conclusions: BC survivors remained a high risk of developing SPC and considerably shortened survival time. In this study, a favorable nomogram was constructed to as a prediction model for 3‐year and 5‐year BCSS of BCFPM patients, largely intending to prolong the life of these patients by assisting clinicians to make individualized follow‐up plans. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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220. Long noncoding RNA ZEB1-AS1 affects paclitaxel and cisplatin resistance by regulating MMP19 in epithelial ovarian cancer cells.
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Dai, Chencheng, Xu, Pengfei, Liu, Siyu, Xu, Sujuan, Xu, Juan, Fu, Ziyi, Cao, Jian, Lv, Mingming, Zhou, Juan, Liu, Guangquan, Zhang, Huilin, and Jia, Xuemei
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LINCRNA , *OVARIAN epithelial cancer , *CANCER cells , *PACLITAXEL , *CISPLATIN - Abstract
Purpose: The long noncoding RNA (lncRNA) ZEB1-AS1 is reported overexpressed in sensitive ovarian cancer cells A2780 compared with paclitaxel (PTX)—and cisplatin (DDP)- resistant. However, the function and mechanism of ZEB1-AS1 in EOC cells still unknown. Methods: We used quantitative real-time PCR (qPCR) to detect ZEB1-AS1 expression in A2780 and A2780/R cells. A combination of siRNA, plasmids, CCK8 and flow cytometry was used to detect the effect of ZEB1-AS1 on ovarian cancer cell A2780 PTX and DDP resistance. Transcriptome sequencing, qPCR, and western blot were used for further mechanistic studies. Results: ZEB1-AS1 depletion using siRNA in chemosensitive A2780 cells significantly increased PTX and DDP resistance. In contrast, ZEB1-AS1 overexpression in PTX- and DDP-resistant A2780/resistant (A2780/R) cells reversed the observed drug resistance. Thus, ZEB1-AS1 plays an important role in PTX and DDP resistance in EOC cells. However, quantitative real-time PCR (qPCR) and western blot results suggested that ZEB1-AS1 did not regulate chemoresistance through regulation of ZEB1 protein. We used sequencing to detect mRNA expression changes in A2780 cells after ZEB1-AS1 silencing. The results indicated that MMP19 was the likely downstream factor of ZEB1-AS1. We further examined whether ZEB1-AS1 played an important role in chemoresistance by silencing MMP19 in ZEB1-AS1-overexpressing cells. CCK8 assay results suggested that MMP19 knockdown promoted ZEB1-AS1-induced chemoresistance to PTX and DDP in A2780 cells. Conclusion: This study is the first to reveal that ZEB1-AS1 plays a pivotal role in cancer chemoresistance. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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221. Comprehensive description of the current breast cancer microenvironment advancements via single-cell analysis.
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Yan, Xueqi, Xie, Yinghong, Yang, Fan, Hua, Yijia, Zeng, Tianyu, Sun, Chunxiao, Yang, Mengzhu, Huang, Xiang, Wu, Hao, Fu, Ziyi, Li, Wei, Jiao, Shiping, and Yin, Yongmei
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BREAST cancer , *RNA sequencing , *NUCLEOTIDE sequencing , *TUMOR microenvironment , *CELL morphology - Abstract
Breast cancer is a heterogeneous disease with a complex microenvironment consisting of tumor cells, immune cells, fibroblasts and vascular cells. These cancer-associated cells shape the tumor microenvironment (TME) and influence the progression of breast cancer and the therapeutic responses in patients. The exact composition of the intra-tumoral cells is mixed as the highly heterogeneous and dynamic nature of the TME. Recent advances in single-cell technologies such as single-cell DNA sequencing (scDNA-seq), single-cell RNA sequencing (scRNA-seq) and mass cytometry have provided new insights into the phenotypic and functional diversity of tumor-infiltrating cells in breast cancer. In this review, we have outlined the recent progress in single-cell characterization of breast tumor ecosystems, and summarized the phenotypic diversity of intra-tumoral cells and their potential prognostic relevance. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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222. Heat treatment effects in oxygen-doped β-Li3PS4 solid electrolyte prepared by wet chemistry method.
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Li, Jiuyong, Liu, Weiming, Zhang, Xiaofeng, Ma, Yibo, Wei, Youxiu, Fu, Ziyi, Li, Jiaming, and Yan, Yue
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SOLID state batteries , *SOLID electrolytes , *WET chemistry , *HEAT treatment , *ELECTROLYTES , *IONIC conductivity , *TREATMENT effectiveness - Abstract
For advanced all-solid-state lithium batteries, the solid electrolyte is one of the most critical components that significantly affect battery performance. Herein, solid electrolytes 75Li2S·(25-x)P2S5·xP2O5 (mol%) are successfully prepared via wet chemistry method. Their XRD patterns show that only the crystalline phase β-Li3PS4 is detected for x = 0, 1, 2, 3, 5 mol% and the highest room-temperature ionic conductivity of 2.53 × 10−4 S cm−1 is obtained when x = 2. Next, effects of heat treatment on the structure and electrochemical performance of 75Li2S·23P2S5·2P2O5 are systematically studied. The thermal stability, morphology, structure, and crystal phase of the 75Li2S·23P2S5·2P2O5 electrolyte heated at different temperatures are characterized by thermogravimetric analysis and differential scanning calorimetry (TGA-DSC), SEM, N2 adsorption/desorption, Raman, and XRD. The 75Li2S·23P2S5·2P2O5 electrolyte heat-treated at 320 °C exhibits the highest ionic conductivity of 2.72 × 10−4 S cm−1, the lowest electronic conductivity of 4.8 × 10−9 S cm−1, and excellent electrochemical stability against the metallic lithium electrode. When the heat treatment temperature further increases from 320 to 500 °C, the electrolyte partially decomposes into Li4P2S6 and Li2S. Our results underscore the importance of heat treatment for the synthesis and performance optimization of solid electrolytes for the application of high-energy solid-state batteries. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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223. Lapatinib in combination with capecitabine versus continued use of trastuzumab in breast cancer patients with trastuzumab-resistance: a retrospective study of a Chinese population.
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Yang, Fan, Huang, Xiang, Sun, Chunxiao, Li, Jianbin, Wang, Biyun, Yan, Min, Jin, Feng, Wang, Haibo, Zhang, Jin, Fu, Peifen, Zeng, Tianyu, Wang, Jian, Li, Wei, Li, Yongfei, Yang, Mengzhu, Li, Jun, Wu, Hao, Fu, Ziyi, Yin, Yongmei, and Jiang, Zefei
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CHINESE people , *LAPATINIB , *BREAST cancer , *METASTATIC breast cancer , *PROGRESSION-free survival - Abstract
Background: The efficacy and safety of lapatinib plus capecitabine (LC or LX) versus trastuzumab plus chemotherapy in patients with HER-positive metastatic breast cancer who are resistant to trastuzumab is unknown.Methods: We retrospectively analyzed data from breast cancer patients who began treatment with regimens of lapatinib plus capecitabine (LC or LX) or trastuzumab beyond progression (TBP) at eight hospitals between May 2010 and October 2017.Results: Among 554 patients who had developed resistance to trastuzumab, the median PFS (progression free survival) was 6.77 months in the LX group compared with 5.6 months in the TBP group (hazard ratio 0.804; 95% CI, 0.67 to 0.96; P = 0.019). The central nervous system progression rate during treatment was 5.9% in the LX group and 12.5% in the TBP group (P = 0.018).Conclusion: The combination of lapatinib and capecitabine showed a prolonged PFS relative to TBP in patients who had progressed on trastuzumab. [ABSTRACT FROM AUTHOR]- Published
- 2020
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224. 1,25(OH)2D3 deficiency increases TM40D tumor growth in bone and accelerates tumor-induced bone destruction in a breast cancer bone metastasis model.
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Lu, Guangping, Li, Jun, Chu, Jiahui, Jin, Shidai, Fu, Ziyi, Miao, Dengshun, and Yin, Yongmei
- Subjects
- *
BONE metastasis , *TUMOR growth , *BREAST cancer , *VITAMIN D , *CELL proliferation - Abstract
Breast cancer is one of the most common malignancies and bone is the commonest site of distant metastases. Evidences indicate that adequate supply of vitamin D will decrease the morbidity and mortality of breast cancer. However, the main role of vitamin D deficiency in breast cancer bone metastases remains unclear. In this study, the relationship between vitamin D and breast cancer bone metastases were evaluated. Results showed that 1,25(OH) 2 D 3 can not only inhibit the proliferation, migration and invasion of breast cancer cell TM40D in vitro, but also attenuate the breast cancer cell TM40D-induced bone destruction in vivo, whose underlying mechanism was at least partially through decreasing the number of the osteoclasts. To our knowledge, this is the first to use 1-alpha-hydroxylase [1α(OH)ase] knockout mice which characterized vitamin D deficiency to establish the breast cancer bone metastases model. Based on this model, we also found that vitamin D deficiency will accelerate the osteolytic lesions, and 1,25(OH) 2 D 3 supplement will restrain osteolytic lesions. Therefore, these findings suggest that vitamin D has the potential capacity to be a therapeutic agent for the breast cancer bone metastases. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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225. Roles of cancer/testis antigens (CTAs) in breast cancer.
- Author
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Li, Yongfei, Li, Jun, Wang, Yifan, Zhang, Yanhong, Chu, Jiahui, Sun, Chunxiao, Fu, Ziyi, Huang, Yi, Zhang, Hansheng, Yuan, Hongyan, and Yin, Yongmei
- Subjects
- *
BREAST cancer diagnosis , *IMMUNOTHERAPY , *TUMOR markers , *ANTIGENS , *CANCER-related mortality , *BREAST tumor treatment , *ANIMALS , *BREAST tumors , *DRUG therapy , *PROGNOSIS , *TESTIS tumors , *TUMOR antigens - Abstract
Breast cancer is the most common cancer diagnosed and is the second leading cause of cancer death among women in the US. For breast cancer, early diagnosis and efficient therapy remains a significant clinical challenge. Therefore, it is necessary to identify novel tumor associated molecules to target for biomarker development and immunotherapy. In this regard, cancer testis antigens (CTAs) have emerged as a potential clinical biomarker targeting immunotherapy for various malignancies due to the nature of its characteristics. CTAs are a group of tumor associated antigens (TAAs) that display normal expression in immune-privileged organs, but display aberrant expression in several types of cancers, particularly in advanced cancers. Investigation of CTAs for the clinical management of breast malignancies indicates that these TAAs have potential roles as novel biomarkers, with increased specificity and sensitivity compared to those currently used in the clinic. Moreover, TAAs could be therapeutic targets for cancer immunotherapy. This review is an attempt to address the promising CTAs in breast cancer and their possible clinical implications as biomarkers and immunotherapeutic targets with particular focus on challenges and future interventions. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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226. Molecular dynamics simulation of CO2 hydrate growth in salt water.
- Author
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Jing, Xianwu, Luo, Qin, Cui, Xuefeng, Wang, Qingjiang, Liu, Youquan, and Fu, Ziyi
- Subjects
- *
MOLECULAR dynamics , *SALINE waters , *CARBON offsetting , *CARBON dioxide , *BINDING energy - Abstract
• Supporting information. • Weak interaction. • IGMH. • H-bonds. To achieve the "carbon peaking and carbon neutrality goals", carbon capture, utilization, and storage (CCUS) is a research hotspot. In our work, molecular dynamics simulation method is used to simulate the CO 2 hydrate growth in NaCl aqueous solution with pure structure I CO 2 hydrate as seed, at a temperature of 275 K, a pressure of 10 MPa, and a total simulation time of 5000 ns. It was found that not all water molecules participated in the formation of hydrate. The F3 and F4 order parameters and cage numbers proved the formation of structure I CO 2 hydrate. According to independent gradient model based on Hirshfeld partition (IGMH) analysis, one water molecule could form four H-bonds with adjacent water molecules in a perfect hydrate; single Cl− could form multiple H-bonds with adjacent water molecules; but the specific water molecule which was near the Cl− might not form four H-bond with its adjacent water molecules, resulting in the inability to form a perfect hydrate and thus water molecules remain liquid; Na+ does not participate in the formation of hydrates. In addition, Na+ and Cl− always come in pairs, so we do believe that NaCl always act as hydrate inhibitor, regardless of its concentration. This is the mechanism how hydrate inhibitor works and plays a significant guiding role in developing highly effective hydrate inhibitors. From the perspective of binding energies of H-bonds, we believe that HOH···Cl− is stronger than HOH···OH 2. The density of CO 2 hydrate is higher than that of seawater, which could help CO 2 hydrate sink spontaneously on the seabed. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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227. Comparative analysis of transient receptor potential channel 5 opposite strand-induced gene expression patterns and protein-protein interactions in triple-negative breast cancer.
- Author
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Peng, Jinghui, Pei, Shengbin, Cui, Yangyang, Xia, Yiqin, Huang, Yue, Wu, Xiaowei, Zheng, Mingjie, Weng, Miaomiao, Han, Xu, Fu, Hongtao, Yang, Lili, Zhou, Wenbin, Fu, Ziyi, Wang, Shui, and Xie, Hui
- Subjects
- *
TRP channels , *TRIPLE-negative breast cancer , *GENE expression , *PROTEIN-protein interactions , *LIQUID chromatography-mass spectrometry - Abstract
In patients with triple-negative breast cancer (TNBC), high tumour mutation burden and aberrant oncogene expression profiles are some of the causes of poor prognosis. Therefore, it is necessary to identify aberrantly expressed oncogenes, since they have the potential to serve as therapeutic targets. Transient receptor potential channel 5 opposite strand (TRPC5OS) has been previously shown to function as a novel tumour inducer. However, the underlying mechanism of TRPC5OS function in TNBC remain to be elucidated. Therefore, in the present study TRPC5OS expression was first measured in tissue samples of patients with TNBC and a panel of breast cancer cell lines (ZR-75-1, MDA-MB-453, SK-BR-3, JIMT-1, BT474 and HCC1937) by using qRT-PCR and Western blotting. Subsequently, the possible effects of TRPC5OS on MDA-MB-231 cells proliferation were determined using Cell Counting Kit-8 and 5-Ethynyl-2′-deoxyuridine assays after Lentiviral transfection of MDA-MB-231. In addition, potential interaction partners of TRPC5OS were explored using liquid chromatography-mass spectrometry (LC-MS)/MS. Gene expression patterns following TRPC5OS overexpression were also detected in MDA-MB-231 cells by using High-throughput sequencing. Gene Ontology (GO) and Kyoto Encyclopaedia of Genes and Genomes (KEGG) analysis were then used to systematically verify the potential interactions among the TRPC5OS-regulated genes. The potential relationship between TRPC5OS-interacting proteins and gene expression patterns were studied using Search Tool for the Retrieval of Interacting Genes/Proteins (STRING) analysis. TRPC5OS expression was found to be significantly higher in TNBC tumour tissues and breast cancer cell lines compared with luminal tumour tissues and ZR-75-1. In addition, the overexpression of TRPC5OS significantly increased cell proliferation. High-throughput sequencing results revealed that 5,256 genes exhibited differential expression following TRPC5OS overexpression, including 3,269 upregulated genes and 1,987 downregulated genes. GO analysis results indicated that the functions of these differentially expressed genes were enriched in the categories of 'cell division' and 'cell proliferation' regulation. KEGG analysis showed that the TRPC5OS-regulated genes were associated with processes of 'homologous recombination' and 'TNF signalling pathways'. Subsequently, 17 TRPC5OS-interacting proteins were found using LC-MS/MS and STRING analysis. The most important protein among interacting proteins was ENO1 which was associated with glycolysis and regulated proliferation of cancer. In summary, data from the present study suggest that TRPC5OS overexpression can increase TNBC cell proliferation and ENO1 may be a potential target protein mediated by TRPC5OS. Therefore, TRPC5OS may serve as a novel therapeutic target for TNBC. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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228. MO18-2 A phase II trial of neoadjuvant apatinib combined with nab-paclitaxel and carboplatin in triple-negative breast cancer.
- Author
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Zeng, Tianyu, Wang, Jue, Li, Wei, Sun, Chunxiao, Yang, Fan, Liang, Yan, Fu, Ziyi, Zha, Xiaoming, and Yin, Yongmei
- Subjects
- *
TRIPLE-negative breast cancer , *APATINIB , *CARBOPLATIN - Published
- 2022
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229. Investigation on the properties of Li doped Ni-W oxide film and application for black electrochromic device.
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Wei, Youxiu, Liu, Weiming, Li, Jiuyong, Fu, Ziyi, and Yan, Yue
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OXIDE coating , *ELECTROCHROMIC devices , *TUNGSTEN trioxide , *RARE earth oxides , *MAGNETRON sputtering , *TRANSITION metal oxides , *ZINC oxide films - Abstract
• Li doped Ni-W oxide film was firstly prepared by magnetron sputtering. • Li doping dramatically improves charge capacity of Ni-W oxide films. • Li doped film has excellent complementary electrochromic characteristics to WO 3 film. • An ECD based on Li doped Ni-W oxide and WO 3 films was prepared. • The colored ECD has a balanced light absorption in the whole visible region. Ni-W oxide film within a certain range of Ni/W ratio could be used as anodic electrochromic material. However, with increasing W content, the film has low charge capacity and poor electrochromic properties. In this paper, lithium (Li) was doped into Ni-W oxide film by magnetron sputtering for improving charge capacity in accordance with electrochromic properties. Results show that doping Li could dramatically improve the charge capacity of Ni-W oxide film, which is associated with the doping amount. The charge capacity density of doped film with about 300 nm thickness is more than 30 mC/cm2 by applying a pulse potential with ± 1.2 V, the transmittance in colored state is lower than 10% in the 300–600 nm wavelength range, and transmittance modulation (∆T) is over than 60% in the whole 440–750 nm wavelength range. The Li doped Ni-W oxide film has excellent complementary electrochromic properties to WO 3 film. EIS data analysis indicates that doping Li could greatly decrease the resistance of ions movement in the film-electrolyte interface and inside the film, and this is benefit for improving the charge capacity of film. Investigations based on XPS and SEM data also show that upon doping Li, the grains on the surface of film are more smaller, and the chemical surroundings around Ni ions is more likely to be changed. These factors result in that the Li doped Ni-W oxide film exhibits good anodic electrochromic properties. The colored device prepared by using Li doped Ni-W oxide and WO 3 films has a balanced light absorption in the whole visible wavelength range, and appears dark brown. [Display omitted] [ABSTRACT FROM AUTHOR]
- Published
- 2022
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230. P16-3 Maintenance therapy in HER2 and hormone receptor-positive breast cancer.
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Bao, Shengnan, Yang, Fan, Sun, Chunxiao, Hua, Yijia, Yang, Mengzhu, Yang, Yiqi, Xie, Yinghong, Yan, Xueqi, Zhang, Yuchen, Zeng, Tianyu, Fu, Ziyi, Wu, Hao, Huang, Xiang, Li, Jun, Li, Wei, and Yin, Yongmei
- Subjects
- *
HORMONE receptor positive breast cancer , *HER2 gene , *CANCER chemotherapy - Published
- 2021
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231. Altered glycolysis results in drug-resistant in clinical tumor therapy.
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Peng, Jinghui, Cui, Yangyang, Xu, Shipeng, Wu, Xiaowei, Huang, Yue, Zhou, Wenbin, Wang, Shui, Fu, Ziyi, and Xie, Hui
- Subjects
- *
DRUG resistance in cancer cells , *GLYCOLYSIS , *PYRUVATE dehydrogenase complex , *CELL metabolism , *PYRUVATE kinase - Abstract
Cancer cells undergo metabolic reprogramming, including increased glucose metabolism, fatty acid synthesis and glutamine metabolic rates. These enhancements to three major metabolic pathways are closely associated with glycolysis, which is considered the central component of cancer cell metabolism. Increasing evidence suggests that dysfunctional glycolysis is commonly associated with drug resistance in cancer treatment, and aberrant glycolysis plays a significant role in drug-resistant cancer cells. Studies on the development of drugs targeting these abnormalities have led to improvements in the efficacy of tumor treatment. The present review discusses the changes in glycolysis targets that cause drug resistance in cancer cells, including hexokinase, pyruvate kinase, pyruvate dehydrogenase complex, glucose transporters, and lactate, as well the underlying molecular mechanisms and corresponding novel therapeutic strategies. In addition, the association between increased oxidative phosphorylation and drug resistance is introduced, which is caused by metabolic plasticity. Given that aberrant glycolysis has been identified as a common metabolic feature of drug-resistant tumor cells, targeting glycolysis may be a novel strategy to develop new drugs to benefit patients with drug-resistance. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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232. tRF-27 competitively Binds to G3BPs and Activates MTORC1 to Enhance HER2 Positive Breast Cancer Trastuzumab Tolerance.
- Author
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He Y, Liu Y, Gong J, Yang F, Sun C, Yan X, Duan N, Hua Y, Zeng T, Fu Z, Liang Y, Li W, Huang X, Tang J, and Yin Y
- Subjects
- Humans, Female, Cell Line, Tumor, Cell Proliferation drug effects, Drug Resistance, Neoplasm, Receptor, ErbB-2 metabolism, Animals, Poly-ADP-Ribose Binding Proteins metabolism, RNA, Transfer metabolism, Mice, RNA Helicases metabolism, Mice, Nude, RNA Recognition Motif Proteins metabolism, Trastuzumab pharmacology, Trastuzumab therapeutic use, Breast Neoplasms metabolism, Breast Neoplasms drug therapy, Mechanistic Target of Rapamycin Complex 1 metabolism
- Abstract
About 20% of breast cancer patients are positive for HER2. The efficacy of current treatments is limited by primary and secondary resistance to trastuzumab. tRNA-derived fragments (tRFs) have shown crucial regulatory roles in various cancers. This study aimed to evaluate the role of tRF-27 in regulating the resistance of HER2-positive breast cancer against trastuzumab. tRF-27 was highly expressed in trastuzumab-resistant cells, and its expression level could predict the resistance to trastuzumab. High expression of tRF-27 promoted the growth and proliferation of trastuzumab-exposed cells. RNA-pulldown assay and mass spectrometry were performed to identify Ras GTPase-activating protein-binding proteins 1 and 2 (G3BPs) (two proteins targeted by tRF-27 ); RNA-immunoprecipitation (RIP) to confirm their bindings; co-immunoprecipitation (co-IP) and RNA-pulldown assay to determine the binding domains between G3BPs and tRF-27 . tRF-27 bound to the nuclear transport factor 2 like domain(NTF2 domain) of G3BPs through a specific sequence. tRF-27 relied on G3BPs and NTF2 domain to increase trastuzumab tolerance. tRF-27 competed with lysosomal associated membrane protein 1(LAMP1) for NTF2 domain, thereby inhibiting lysosomal localization of G3BPs and tuberous sclerosis complex (TSC). Overexpression of tRF-27 inhibited phosphorylation of TSCs and promoted the activation of mechanistic target of rapamycin complex 1(MTORC1) to enhance cell proliferation and entice the resistance of HER2-positive breast cancer against trastuzumab., Competing Interests: Competing Interests: The authors have declared that no competing interest exists., (© The author(s).)
- Published
- 2024
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233. Unveiling Alterations of Epigenetic Modifications and Chromatin Architecture Leading to Lipid Metabolic Reprogramming during the Evolutionary Trastuzumab Adaptation of HER2-Positive Breast Cancer.
- Author
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Duan N, Hua Y, Yan X, He Y, Zeng T, Gong J, Fu Z, Li W, and Yin Y
- Subjects
- Humans, Female, Drug Resistance, Neoplasm genetics, Cell Line, Tumor, Antineoplastic Agents, Immunological therapeutic use, Antineoplastic Agents, Immunological pharmacology, Metabolic Reprogramming, Breast Neoplasms genetics, Breast Neoplasms drug therapy, Breast Neoplasms metabolism, Trastuzumab therapeutic use, Trastuzumab pharmacology, Epigenesis, Genetic genetics, Epigenesis, Genetic drug effects, Receptor, ErbB-2 genetics, Receptor, ErbB-2 metabolism, Chromatin metabolism, Chromatin genetics, Lipid Metabolism drug effects, Lipid Metabolism genetics
- Abstract
Secondary trastuzumab resistance represents an evolutionary adaptation of HER2-positive breast cancer during anti-HER2 treatment. Most current studies have tended to prioritize HER2 and its associated signaling pathways, often overlooking broader but seemingly less relevant cellular processes, along with their associated genetic and epigenetic mechanisms. Here, transcriptome data is not only characterized but also examined epigenomic and 3D genome architecture information in both trastuzumab-sensitive and secondary-resistant breast cancer cells. The findings reveal that the global metabolic reprogramming associated with trastuzumab resistance may stem from genome-wide alterations in both histone modifications and chromatin structure. Specifically, the transcriptional activities of key genes involved in lipid metabolism appear to be regulated by variant promoter H3K27me3 and H3K4me3 modifications, as well as promoter-enhancer interactions. These discoveries offer valuable insights into how cancer cells adapt to anti-tumor drugs and have the potential to impact future diagnostic and treatment strategies., (© 2024 The Authors. Advanced Science published by Wiley‐VCH GmbH.)
- Published
- 2024
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234. Physical breakdown of CH 4 hydrate under stress: a molecular dynamics simulation study.
- Author
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Jing X, Zhou L, Ma Y, Fu Z, Huang Q, and Zhang Z
- Abstract
As a solid energy source, CH
4 hydrate will inevitably break down physically as the result of geological movement or exploitation. Here, the molecular dynamics method was employed to simulate the uniaxial-deformation behavior of structure I (sI type) CH4 hydrate under stress. The stress increases regardless of whether the hydrate is stretched or squeezed, and other physical parameters also changed, such as hydrate cage numbers, order parameters, and the number of water molecules. A noticeable difference is observed between the two systems. Upon stretching, the stress immediately recovers to 0 GPa once the hydrate is completely stretched apart. During the squeeze process, the stress is ultimately not zero since solid and liquid are always in contact. When the hydrate is stretched apart, about 5% of water molecules change from solid to liquid, about 7.8% of CH4 molecules lose their shelter and become free due to the disintegration of water cages. While in the squeezing process, large cages (512 62 ) are crushed more easily than small cages (512 ); in the end, about 93.5% of large cages and 73% of small cages are crushed, and approximately 87.5% CH4 is released from the cages. In mining CH4 hydrates, caution must be exercised, as if the hydrates break as a result of stress, a large release of CH4 may pose a security risk., (© 2024. The Author(s).)- Published
- 2024
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235. The Efficacy & Molecular Mechanisms of a Terpenoid Compound Ganoderic Acid C1 on Corticosteroid-Resistant Neutrophilic Airway Inflammation: In vivo and in vitro Validation.
- Author
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Wang ZZ, Li H, Maskey AR, Srivastava K, Liu C, Yang N, Xie T, Fu Z, Li J, Liu X, Sampson HA, and Li XM
- Abstract
Introduction: Neutrophil predominant airway inflammation is associated with severe and steroid-resistant asthma clusters. Previously, we reported efficacy of ASHMI, a three-herb TCM asthma formula in a steroid-resistant neutrophil-dominant murine asthma model and further identified Ganoderic Acid C1 (GAC1) as a key ASHMI active compound in vitro. The objective of this study is to investigate GAC1 effect on neutrophil-dominant, steroid-resistant asthma in a murine model., Methods: In this study, Balb/c mice were systematically sensitized with ragweed (RW) and alum and intranasally challenged with ragweed. Unsensitized/PBS challenged mice served as normal controls. Post sensitization, mice were given 4 weeks of oral treatment with GAC1 or acute dexamethasone (Dex) treatment at 48 hours prior to challenge. Pulmonary cytokines were measured by ELISA, and lung sections were processed for histology by H&E staining. Furthermore, GAC1 effect on MUC5AC expression and on reactive oxygen species (ROS) production in human lung epithelial cell line (NCI-H292) was determined by qRT-PCR and ROS assay kit, respectively. Computational analysis was applied to select potential targets of GAC1 in steroid-resistant neutrophil-dominant asthma. Molecular docking was performed to predict binding modes between GAC1 and Dex with TNF-α., Results: The result of the study showed that chronic GAC1 treatment, significantly reduced pulmonary inflammation (P < 0.01-0.001 vs Sham) and airway neutrophilia (P < 0.01 vs Sham), inhibited TNF-α, IL-4 and IL-5 levels (P < 0.05-0.001 vs Sham). Acute Dex treatment reduced eosinophilic inflammation and IL-4, IL-5 levels, but had no effect on neutrophilia and TNF-α production. GAC1 treated H292 cells showed decreased MUC5AC gene expression and production of ROS (P < 0.001 vs stimulated/untreated cells). Molecular docking results showed binding energy of complex GAC1-TNF was -10.8 kcal/mol., Discussion: GAC1 may be a promising anti-asthma botanical drug for treatment of steroid-resistant asthma., Competing Interests: Xiu-Min Li received research support to her institution from the National Institutes of Health (NIH)/National Center for Complementary and Integrative Health (NCCAM) # 1P01 AT002644725-01 “Center for Chinese Herbal Therapy (CHT) for Asthma”, and grant #1R01AT001495-01A1 and 2R01 AT001495- 05A2, NIH/NIAID R43AI148039, NIH/NIAID 1R21AI176061-01, NIH/NIAID 1R44AI177183-01, NIH/NIAID 1R41AI172572-01A1, Food Allergy Research and Education (FARE), Winston Wolkoff Integrative Medicine Fund for Allergies and Wellness, the Parker Foundation and Henan University of Chinese Medicine; received consultancy fees from FARE and Johnson & Johnson Pharmaceutical Research & Development, L.L.C. Bayer Global Health LLC; received royalties from UpToDate; received travel expenses from the NCCAM and FARE; share US patent US7820175B2 (FAHF-2), US10500169B2 (XPP), US10406191B2 (S. Flavescens), US10028985B2 (WL); US11351157B2 (nanoBBR); take compensation from her practice at Center for Integrative Health and Acupuncture PC; US Times Technology Inc is managed by her related party; is a member of General Nutraceutical Technology LLC. Nan Yang received research support to his institute from the National Institutes of Health (NIH)/ National Center for Complementary and Alternative Medicine (NCCAM), NIH/NIAID R43AI148039, NIH/NIAID 1R21AI176061- 01, NIH/NIAID 1R44AI177183-01, NIH/NIAID 1R41AI172572- 01A1; shares US patent: US10500169B2 (XPP), US10406191B2 (S. Flavescens), US10028985B2 (WL); and is a member of General Nutraceutical Technology, LLC; receives a salary from General Nutraceutical Technology, LLC; Kamal Srivastava shares US11351157B2 (nanoBBR); Hugh Sampson shares US patent PCT/ AQ7 US05/008417 (FAHF-2), PCT/US2014/012306 (S. Flavescens). He also reports personal fees for consulting and stock options from DBV Technologies and N-Fold, LLC; personal fees for Scientific Advisory Board from Siolta Therapeutics; and personal fees for serving on a Anaphylaxis Adjudication Committee from AbbVie, Inc, outside the submitted work. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (© 2024 Wang et al.)
- Published
- 2024
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236. An Imbalance in Histone Modifiers Induces tRNA-Cys-GCA Overexpression and tRF-27 Accumulation by Attenuating Promoter H3K27me3 in Primary Trastuzumab-Resistant Breast Cancer.
- Author
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Duan N, Hua Y, Yan X, He Y, Zeng T, Gong J, Fu Z, Li W, and Yin Y
- Abstract
tRNA-derived fragments (tRFs) play crucial roles in cancer progression. Among them, tRF-27 has been identified as a key factor in promoting naïve trastuzumab resistance in HER2-positive breast cancer. However, the origin of tRF-27 remains uncertain. In this study, we propose that the upregulated expression of specific cysteine tRNAs may lead to the increased accumulation of tRF-27 in trastuzumab-resistant JIMT1 cells. Mechanistically, the reduced inhibitory H3K27me3 modification at the promoter regions of tRF-27-related tRNA genes in JIMT1 cells, potentially resulting from decreased EZH2 and increased KDM6A activity, may be a critical factor stimulating the transcriptional activity of these tRNA genes. Our research offers fresh insights into the mechanisms underlying elevated tRF-27 levels in trastuzumab-resistant breast cancer cells and suggests potential strategies to mitigate trastuzumab resistance in clinical treatments.
- Published
- 2024
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237. Sulforaphane activates CD8 + T cells antitumor response through IL-12RB2/MMP3/FasL-induced MDSCs apoptosis'.
- Author
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Liu J, Chen H, Guo C, Li J, Li M, Zhao M, Fu Z, Zhang Z, Li F, Zhao X, Yang L, Wang L, Lv Q, and Zhang Y
- Subjects
- Humans, Mice, Animals, CD8-Positive T-Lymphocytes, Matrix Metalloproteinase 3 pharmacology, Cell Line, Tumor, Apoptosis, Myeloid-Derived Suppressor Cells, Sulfoxides, Isothiocyanates
- Abstract
Background: Extensive attention has been given to the role of myeloid-derived suppressor cells (MDSCs) in driving tumor progression and treatment failure. Preclinical studies have identified multiple agents that eliminate MDSCs. However, none have been authorized in the cliniccal ues due to the safety reasons. In the present study, we investigated the efficacy and mechanism of sulforaphane (SFN) to eliminate MDSCs in the tumor microenvironment (TME)., Methods: We monitored SFN effect on tumor growth and the percents or apoptosis of immune cell subsets in mice models bearing LLC or B16 cells. Flow cytometry, quantitative reverse transcription-PCR, immunohistochemistry, ELISA, immunofluorescence, imaging flow cytometry and western blot were performed to validate the role of SFN on MDSCs function in vivo and in vitro. RNA sequencing was then used to interrogate the mechanisms of how SFN regulated MDSCs function. Tumor xenograft models were established to evaluate the involvement of IL-12RB2/MMP3/FasL induced MDSCs apoptosis in vivo. We verified the effect of SFN on MDSCs and CD8
+ T cells in the blood samples from a phase I clinical trial (KY-2021-0350)., Results: In this study, we elucidated that SFN liberated CD8+ T-cell antitumor ability by reducing MDSCs abundance, leading to repressed tumor growth. SFN treatment suppressed MDSCs accumulation in the peripheral blood and tumor sites of mice, but had no effect on the bone marrow. Mechanistically, SFN activates IL-12RB2, which stimulates the MMP3/FasL signaling cascade to trigger caspase 3 cleavage and induce apoptosis in MDSCs. Clinically, SFN treatment eliminates peripheral MDSCs and increases the percentage and activation of CD8+ T cells., Conclusions: Collectively, we uncovered the role of SFN in eliminating MDSCs to emancipate CD8+ T cells through IL-12RB2/MMP3/FasL induced apoptosis, thus providing a strategy for targeting MDSCs to control tumors and improve clinical efficacy., Competing Interests: Competing interests: None declared., (© Author(s) (or their employer(s)) 2024. Re-use permitted under CC BY-NC. No commercial re-use. See rights and permissions. Published by BMJ.)- Published
- 2024
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238. High B7-H3 expression with low PD-L1 expression identifies armored-cold tumors in triple-negative breast cancer.
- Author
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Mei J, Cai Y, Zhu H, Jiang Y, Fu Z, Xu J, Chen L, Yang K, Zhao J, Song C, Zhang Y, Mao W, and Yin Y
- Abstract
Triple-negative breast cancer (TNBC) is generally regarded as the most aggressive subtype among breast cancers, but exhibits higher chemotherapeutic and immunotherapeutic responses due to its unique immunogenicity. Thus, appropriate discrimination of subtypes is critical for guiding therapeutic options in clinical practice. In this research, using multiple in-house and public cohorts, we investigated the expression features and immuno-correlations of B7-H3 in breast cancer and checked the anti-tumor effect of the B7-H3 monoclonal antibody in a mouse model. We also developed a novel classifier combining B7-H3 and PD-L1 expression in TNBC. B7-H3 was revealed to be related to immuno-cold features and accumulated collagen in TNBC. In addition, targeting B7-H3 using the monoclonal antibody significantly suppressed mouse TNBC growth, reversed the armored-cold phenotype, and also boosted anti-PD-1 immunotherapy. In addition, patients with B7-H3 high and PD-L1 low expression showed the lowest anti-tumor immune infiltration, the highest collagen level, and the lowest therapeutic responses to multiple therapies, which mostly belong to armored-cold tumors. Overall, this research provides a novel subtyping strategy based on the combination of B7-H3/PD-L1 expression, which leads to a novel approach for the management of TNBC., (© 2024. The Author(s).)
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- 2024
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239. Molecular simulation of imperfect structure I CO 2 hydrate growth in brine.
- Author
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Fu Z, Jing X, Zhou L, Luo Q, and Zhang P
- Abstract
In order to investigate the viability of carbon dioxide (CO
2 ) storage in seawater, molecular dynamics techniques were employed to study the dynamic evolution of CO2 hydrate in saline water. The simulation was conducted under specific conditions: a temperature of 275 K, a pressure of 10 MPa and a simulated marine environment achieved using a 3.4 wt% sodium chloride (NaCl) solution. The total simulation time was 1000 ns. The results of the simulation indicate that the pre-existence of CO2 hydrate crystals as seeds leads to rapid growth of CO2 hydrate. However, analysis of the F3 and F4 order parameters reveals that the hydrate does not meet the standard values of the perfect structure I (sI) type, confirming the existence of an imperfect structure during the simulation. Additionally, the changes in the number of different phase states of water molecules during the hydrate growth process shows that there are always some liquid water molecules, which means some water molecules fail to form solid water cages. Further investigation suggests that the presence of Na+ and Cl- hampers the hydrogen bonds between water molecules, resulting in incomplete cage structures. By analyzing the density variations in the system, it is observed that CO2 hydrate, with a density of around 1.133 g cm-3 , forms rapidly, surpassing the average density of seawater. This density increase facilitates the efficient and swift containment of CO2 on the seabed, thereby supporting the feasibility of the CO2 storage theory.- Published
- 2023
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240. MDSCs-derived GPR84 induces CD8 + T-cell senescence via p53 activation to suppress the antitumor response.
- Author
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Liu J, Liu J, Qin G, Li J, Fu Z, Li J, Li M, Guo C, Zhao M, Zhang Z, Li F, Zhao X, Wang L, and Zhang Y
- Subjects
- Animals, Humans, Mice, CD8-Positive T-Lymphocytes, Immunosuppression Therapy, Receptors, G-Protein-Coupled genetics, Receptors, G-Protein-Coupled metabolism, T-Cell Exhaustion, Tumor Suppressor Protein p53 genetics, Tumor Suppressor Protein p53 metabolism, Myeloid-Derived Suppressor Cells
- Abstract
Backgrounds: G-protein-coupled receptor 84 (GPR84) marks a subset of myeloid-derived suppressor cells (MDSCs) with stronger immunosuppression in the tumor microenvironment. Yet, how GPR84 endowed the stronger inhibition of MDSCs to CD8
+ T cells function is not well established. In this study, we aimed to identify the underlying mechanism behind the immunosuppression of CD8+ T cells by GPR84+ MDSCs., Methods: The role and underlying mechanism that MDSCs or exosomes (Exo) regulates the function of CD8+ T cells were investigated using immunofluorescence, fluorescence activating cell sorter (FACS), quantitative real-time PCR, western blot, ELISA, Confocal, RNA-sequencing (RNA-seq), etc. In vivo efficacy and mechanistic studies were conducted with wild type, GPR84 and p53 knockout C57/BL6 mice., Results: Here, we showed that the transfer of GPR84 from MDSCs to CD8+ T cells via the Exo attenuated the antitumor response. This inhibitory effect was also observed in GPR84-overexpressed CD8+ T cells, whereas depleting GPR84 elevated CD8+ T cells proliferation and function in vitro and in vivo. RNA-seq analysis of CD8+ T cells demonstrated the activation of the p53 signaling pathway in CD8+ T cells treated with GPR84+ MDSCs culture medium. While knockout p53 did not induce senescence in CD8+ T cells treated with GPR84+ MDSCs. The per cent of GPR84+ CD8+ T cells work as a negative indicator for patients' prognosis and response to chemotherapy., Conclusions: These data demonstrated that the transfer of GPR84 from MDSCs to CD8+ T cells induces T-cell senescence via the p53 signaling pathway, which could explain the strong immunosuppression of GPR84 endowed to MDSCs., Competing Interests: Competing interests: No, there are no competing interests., (© Author(s) (or their employer(s)) 2023. Re-use permitted under CC BY-NC. No commercial re-use. See rights and permissions. Published by BMJ.)- Published
- 2023
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241. Efficacy and safety of the proposed bevacizumab biosimilar BAT1706 compared with reference bevacizumab in patients with advanced nonsquamous non-small cell lung cancer: A randomized, double-blind, phase III study.
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Chen L, Rangel JDG, Cil T, Li X, Cicin I, Shen Y, Liu Z, Ozyilkan O, Igor B, Chen J, Oleksandr K, Chen Z, Zhang H, Fu Z, Dong Q, Song S, Yu JC, and Zhang L
- Subjects
- Humans, Antineoplastic Combined Chemotherapy Protocols, Bevacizumab adverse effects, Carboplatin therapeutic use, Double-Blind Method, Paclitaxel therapeutic use, Biosimilar Pharmaceuticals adverse effects, Carcinoma, Non-Small-Cell Lung drug therapy, Lung Neoplasms drug therapy
- Abstract
Background: BAT1706 is a proposed biosimilar of bevacizumab (Avastin®). We aimed to compare the efficacy and safety of BAT1706 with that of EU-sourced reference bevacizumab (EU-bevacizumab) in patients with advanced nonsquamous non-small cell lung cancer (NSCLC)., Methods: Patients were randomized 1:1 to BAT1706 plus paclitaxel and carboplatin (BAT1706 arm) or EU-bevacizumab plus paclitaxel and carboplatin (EU-bevacizumab arm) given every 3 weeks for six cycles, followed by maintenance therapy with BAT1706 or EU-bevacizumab. The primary endpoint was overall response rate at week 18 (ORR
18 ). Clinical equivalence was demonstrated if the 90% confidence interval (CI) of the BAT1706:EU-bevacizumab ORR18 risk ratio was contained within the predefined equivalence margins of 0.75-1.33 (China National Medical Products Administration requirements), or 0.73-1.36 (US Food and Drug Administration), or if the 95% CI of the ORR18 risk difference between treatments was contained within the predefined equivalence margin of -0.12 to 0.15 (EMA requirements)., Results: In total, 649 randomized patients (BAT1706, n = 325; EU-bevacizumab, n = 324) received at least one cycle of combination treatment. The ORR18 was comparable between the BAT1706 and EU-bevacizumab arms (48.0% and 44.5%, respectively). The ORR18 risk ratio of 1.08 (90% CI: 0.94-1.24) and the ORR18 risk difference of 0.03 (95% CI: -0.04 to 0.11) were within the predefined equivalence margins, demonstrating the biosimilarity of BAT1706 and EU-bevacizumab. The safety profile of BAT1706 was consistent with that of EU-bevacizumab and no new safety signals were observed., Conclusion: In patients with advanced nonsquamous NSCLC, BAT1706 demonstrated clinical equivalence to EU-bevacizumab in terms of efficacy, safety, pharmacokinetics, and immunogenicity., (© 2023 The Authors. Cancer Medicine published by John Wiley & Sons Ltd.)- Published
- 2023
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242. tRF-21-LNK8KEP1B as a potential novel diagnostic biomarker for enthesitis-related arthritis.
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Wang P, Fu Z, Liu Y, Huang S, Guo Y, Jin J, Fang Y, Pan Y, Fan Z, and Yu H
- Subjects
- Child, Humans, Biomarkers, RNA, Transfer genetics, RNA, Transfer metabolism, Arthritis
- Abstract
Objective: tRNA-derived fragments (tRFs) play crucial roles in the progression of various diseases, and widely distribute in human tissues, including blood and urine. The diagnosis of enthesitis-related arthritis (ERA) is based on the observation of clinical manifestations. Therefore, we aimed to investigate whether serum tRFs can be used as diagnostic markers for ERA., Methods: Serum was collected from children admitted to the Children's Hospital Affiliated with Nanjing Medical University between February 2022 to October 2022. The expression profiles of tRFs in the serum of ERA patients (n = 5) and healthy controls (HCs; n = 5) were investigated using small RNA high-throughput sequencing. The level and diagnostic value of tRF-21-LNK8KEP1B were evaluated by real-time quantitative PCR in serum samples from 30 ERA patients and 31 HCs. The specificity and sensitivity of tRFs were determined using receiver operating characteristic analyses. Bioinformatics analysis was performed to explore and identify the potential biological pathways induced by tRFs., Results: Ninety-eight upregulated and 63 downregulated tRFs were identified in the serum. We selected tRF-21-LNK8KEP1B as a candidate marker using KEGG pathway enrichment and PCR validation. tRF-21-LNK8KEP1B was substantially increased in the serum of ERA patients compared with that in HCs. The area under the curve (AUC) for tRF-21-LNK8KEP1B in the ERA group was 0.7849., Conclusions: Collectively, we demonstrated the promising role of serum tRF-21-LNK8KEP1B -levels as a diagnostic biomarker for ERA., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 The Authors. Published by Elsevier B.V. All rights reserved.)
- Published
- 2023
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243. Heat-shock protein 90α protects NME1 against degradation and suppresses metastasis of breast cancer.
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Zhang Y, Zhao G, Yu L, Wang X, Meng Y, Mao J, Fu Z, Yin Y, Li J, Wang X, and Guo C
- Subjects
- Humans, Female, Cell Line, Tumor, Protein Processing, Post-Translational, HSP90 Heat-Shock Proteins metabolism, Neoplasm Metastasis, NM23 Nucleoside Diphosphate Kinases genetics, Heat-Shock Proteins metabolism, Breast Neoplasms pathology
- Abstract
Background: NME1 has been exploited as a potential translational target for decades. Substantial efforts have been made to upregulate the expression of NME1 and restore its anti-metastasis function in metastatic cancer., Methods: Cycloheximide (CHX) chase assay was used to measure the steady-state protein stability of NME1 and HSP90α. The NME1-associating proteins were identified by immunoprecipitation combined with mass spectrometric analysis. Gene knockdown and overexpression were employed to examine the impact of HSP90AA1 on intracellular NME1 degradation. The motility and invasiveness of breast cancer cells were examined in vitro using wound healing and transwell invasion assays. The orthotopic spontaneous metastasis and intra-venous experimental metastasis assays were used to test the formation of metastasis in vivo, respectively., Results: HSP90α interacts with NME1 and increases NME1 lifetime by impeding its ubiquitin-proteasome-mediated degradation. HSP90α overexpression significantly inhibits the metastatic potential of breast cancer cells in vitro and in vivo. A novel cell-permeable peptide, OPT22 successfully mimics the HSP90α function and prolongs the life span of endogenous NME1, resulting in reduced metastasis of breast cancer., Conclusion: These results not only reveal a new mechanism of NME1 degradation but also pave the way for the development of new and effective approaches to metastatic cancer therapy., (© 2023. The Author(s), under exclusive licence to Springer Nature Limited.)
- Published
- 2023
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244. Digging out the biology properties of tRNA-derived small RNA from black hole.
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Shi H, Xie J, Pei S, He D, Hou H, Xu S, Fu Z, and Shi X
- Abstract
An unique subclass of functional non-coding RNAs generated by transfer RNA (tRNA) under stress circumstances is known as tRNA-derived small RNA (tsRNA). tsRNAs can be divided into tRNA halves and tRNA-derived fragments (tRFs) based on the different cleavage sites. Like microRNAs, tsRNAs can attach to Argonaute (AGO) proteins to target downstream mRNA in a base pairing manner, which plays a role in rRNA processing, gene silencing, protein expression and viral infection. Notably, tsRNAs can also directly bind to protein and exhibit functions in transcription, protein modification, gene expression, protein stabilization, and signaling pathways. tsRNAs can control the expression of tumor suppressor genes and participate in the initiation of cancer. It can also mediate the progression of diseases by regulating cell viability, migration ability, inflammatory factor content and autophagy ability. Precision medicine targeting tsRNAs and drug therapy of plant-derived tsRNAs are expected to be used in clinical practice. In addition, liquid biopsy technology based on tsRNAs indicates a new direction for the non-invasive diagnosis of diseases., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2023 Shi, Xie, Pei, He, Hou, Xu, Fu and Shi.)
- Published
- 2023
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245. Erratum: SECTM1 is upregulated in immuno-hot tumors and predicts immunotherapeutic efficacy in multiple cancers.
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Mei J, Fu Z, Cai Y, Song C, Zhou J, Zhu Y, Mao W, Xu J, and Yin Y
- Abstract
[This corrects the article DOI: 10.1016/j.isci.2023.106027.]., (© 2023 The Author(s).)
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- 2023
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246. Maternal Serum tRNA-Derived Fragments (tRFs) as Potential Candidates for Diagnosis of Fetal Congenital Heart Disease.
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Lu E, Wu L, Chen B, Xu S, Fu Z, Wu Y, Wu Y, and Gu H
- Abstract
Background: Congenital heart disease (CHD) is one of the most predominant birth defects that causes infant death worldwide. The timely and successful surgical treatment of CHD on newborns after delivery requires accurate detection and reliable diagnosis during pregnancy. However, there are no biomarkers that can serve as an early diagnostic factor for CHD patients. tRNA-derived fragments (tRFs) have been reported to play an important role in the occurrence and progression of numerous diseases, but their roles in CHD remains unknown., Methods: High-throughput sequencing was performed on the peripheral blood of pregnant women with an abnormal fetal heart and a normal fetal heart, and 728 differentially expressed tRFs/tiRNAs were identified, among which the top 18 tRFs/tiRNAs were selected as predictive biomarkers of CHD. Then, a quantitative reverse transcriptase polymerase chain reaction verified the expression of tRFs/tiRNAs in more clinical samples, and the correlation between tRFs/tiRNAs abnormalities and CHD was analyzed., Results: tRF-58:74-Gly-GCC-1 and tiRNA-1:35-Leu-CAG-1-M2 may be promising biomarkers. Through further bioinformatics analysis, we predicted that TRF-58:744-GLy-GCC-1 could induce CHD by influencing biological metabolic processes., Conclusions: Our results provide a theoretical basis for the abnormally expressed tRF-58:74-Gly-GCC-1 in maternal peripheral blood as a new potential biomarker for the accurate diagnosis of CHD during pregnancy.
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- 2023
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247. SECTM1 is upregulated in immuno-hot tumors and predicts immunotherapeutic efficacy in multiple cancers.
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Mei J, Fu Z, Cai Y, Song C, Zhou J, Zhu Y, Mao W, Xu J, and Yin Y
- Abstract
Immune checkpoint inhibitors (ICIs) have transformed the management of advanced cancers. However, many patients could not benefit from ICIs therapy, and thus several biomarkers for therapeutic prediction have been uncovered. In this research, more than ten public and in-house cohorts were used to explore the predictive value and immunological correlations of secreted and transmembrane 1 (SECTM1) in cancers. SECTM1 expression was enhanced in tumors from patients with well immunotherapeutic responses in multiple cancers. In addition, SECTM1 was immuno-correlated in pan-cancer and enhanced in immuno-hot tumors. In vitro assays revealed that SECTM1 was upregulated by the IFN-γ/STAT1 signaling. Moreover, analysis of in-house immunotherapy cohorts suggested both tumor-expressed and circulating SECTM1 are promising biomarkers to predict therapeutic responses. Overall, this study reveals that SECTM1 is a biomarker of benefit to ICIs in cancer patients. Further studies including large-scale patients are needed to establish its utilization as a biomarker of benefit to ICIs., Competing Interests: The authors declare no competing interests., (© 2023 The Author(s).)
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- 2023
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248. Proteolytic regulation of CD73 by TRIM21 orchestrates tumor immunogenicity.
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Fu Z, Chen S, Zhu Y, Zhang D, Xie P, Jiao Q, Chi J, Xu S, Xue Y, Lu X, Song X, Cristofanilli M, Gradishar WJ, Kalinsky K, Yin Y, Zhang B, and Wan Y
- Subjects
- Humans, CD8-Positive T-Lymphocytes, Proteolysis, Ubiquitin-Protein Ligases, Immunotherapy methods, Triple Negative Breast Neoplasms
- Abstract
Despite the rapid utilization of immunotherapy, emerging challenges to the current immune checkpoint blockade need to be resolved. Here, we report that elevation of CD73 levels due to its aberrant turnover is correlated with poor prognosis in immune-cold triple-negative breast cancers (TNBCs). We have identified TRIM21 as an E3 ligase that governs CD73 destruction. Disruption of TRIM21 stabilizes CD73 that in turn enhances CD73-catalyzed production of adenosine, resulting in the suppression of CD8
+ T cell function. Replacement of lysine 133, 208, 262, and 321 residues by arginine on CD73 attenuated CD73 ubiquitylation and degradation. Diminishing of CD73 ubiquitylation remarkably promotes tumor growth and impedes antitumor immunity. In addition, a TRIM21high /CD73low signature in a subgroup of human breast malignancies was associated with a favorable immune profile. Collectively, our findings uncover a mechanism that governs CD73 proteolysis and point to a new therapeutic strategy by modulating CD73 ubiquitylation.- Published
- 2023
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249. High rate of epidermal growth factor receptor-mutated primary lung cancer in patients with primary breast cancer.
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Zeng T, Xu H, Liu Y, Sun C, Yang F, Liang Y, Huang X, Fu Z, Li W, and Yin Y
- Abstract
Background: With increased survival in breast cancer, resulting from advances in treatment, patients incur the possibility of subsequent primary malignancies, especially lung cancer. The aim of this study was to assess the frequency of CT-detected pulmonary ground-glass nodules and lung cancer following breast cancer diagnosis, the associations between breast cancer and lung cancer, the pathological features of double primary cancer, and the status of epidermal growth factor receptor (EGFR) mutations in second primary lung cancer., Methods: Clinical data from more than 9000 individuals who were diagnosed with primary breast cancer at Jiangsu Province Hospital (Jiangsu, China) between January 2008 and December 2021 were retrospectively analyzed., Results: Of the 9179 patients, 6512 underwent diagnostic CT, 55 (0.8%) were diagnosed with a second primary lung cancer, which accounted for approximately 18.4% of the pulmonary ground-glass nodules (GGNs) detected. The incidence was higher than in the general female population (standardized incidence ratio 1.4 [95% confidence interval (CI): 1.25-1.55]). Patients who experienced a second primary lung cancer exhibited a significantly higher rate of EGFR mutation (78.5%) than those with lung adenocarcinoma alone, with most exhibiting low-grade malignancy, older age, estrogen receptor negativity, low Ki67, and no lymph node metastasis., Conclusions: Breast cancer patients, especially those with low-grade malignancy, were at high risk for developing primary lung cancer. For isolated GGN in patients with high-risk factors, clinicians should insist on close follow-up. Furthermore, EGFR may play an important role in primary lung adenocarcinomas and breast cancer., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Zeng, Xu, Liu, Sun, Yang, Liang, Huang, Fu, Li and Yin.)
- Published
- 2022
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250. Molecular Characterization of Exosomes for Subtype-Based Diagnosis of Breast Cancer.
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Cao Y, Yu X, Zeng T, Fu Z, Zhao Y, Nie B, Zhao J, Yin Y, and Li G
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- Cell Line, Tumor, Female, Humans, Reproducibility of Results, Breast Neoplasms metabolism, Exosomes, MicroRNAs metabolism, Triple Negative Breast Neoplasms drug therapy
- Abstract
Breast cancer is very heterogeneous and the most frequently diagnosed cancer worldwide, and precise therapy targeting specific subtypes may improve the survival rates of breast cancer patients. In this study, we designed a biomimetic vesicle by camouflaging catalytic DNA machinery with a breast cancer cell membrane, which enabled the molecular classification of circulating exosomes for subtype-based diagnosis through homotypic recognition. In addition, the vesicles specifically targeted and fused with breast cancer exosomes with phenotypic homology and manipulated the DNA machinery to amplify electrochemical signaling using exosomal RNA as an endogenous trigger. The biomimetic vesicles prepared with MCF-7 cancer cell-derived membranes were shown to recognize estrogen receptor-positive breast cancer exosomes and exhibited a low detection limit of 557 particles mL
-1 with microRNA-375 used as the endogenous biomarker. Furthermore, the biomimetic vesicles prepared with MDA-MB-231 cancer cell-derived membranes displayed satisfactory performance in a homotypic analysis of triple-negative breast cancer exosomes with a potential therapeutic target, PD-L1 mRNA, used as the endogenous biomarker. Most importantly, cross-validation experiments confirmed the high accuracy and selectivity of this homotypic recognition-driven analysis for molecular subtyping of breast cancer. When applied to clinical samples of breast cancer patients, the vesicles demonstrated feasibility and reliability for evaluating the molecular features of cancer cell-derived exosomes and enabled stage-specific monitoring of breast cancer patients because the electrochemical signals showed a positive correlation with disease progression. Therefore, this work may provide new ideas for the precise diagnosis and personalized treatment of breast cancer patients throughout the whole disease process.- Published
- 2022
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