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A letter to the editor is presented in response to the article "Double trouble: the expansion of the Suez Canal and marine bioinvasions in the Mediterranean Sea" in the 2014 issue.

Increasing anthropogenic pressures are causing long-lasting regime shifts from high-diversity ecosystems to low-diversity degraded ones. Understanding the effects of multiple threats on ecosystems, and identifying processes allowing for the recovery of biodiversity, are the current major challenges in ecology. In several temperate marine areas, large parts of rocky subtidal habitats characterised by high diversity have been completely degraded to barren grounds by overfishing, including illegal date mussel fishing. Bare areas are characterized by the dominance of sea urchins whose grazing perpetuates the impact of overfishing. We investigated experimentally the separate and combined effects of nutrient enrichment and sea urchin exclusion on the recovery of barren grounds. Our results indicate that the two factors have a synergistic effect leading to the re-establishment of erect macroalgal canopies, enhancing the structural complexity of subtidal assemblages. In particular, in the overfished system considered here, the recovery of disturbed assemblages could occur only if sea urchins are removed. However, the recolonization of barren grounds by erect macroalgae is further enhanced under enriched conditions. This study demonstrates that the recovery of dramatically depleted marine habitats is possible, and provides useful indications for specific management actions, which at present are totally lacking, to achieve the restoration of barren grounds caused by human activity. [ABSTRACT FROM AUTHOR]

Twenty leading scientists in the field of marine conservation planning attended the first international workshop on conservation planning in the Mediterranean Sea. This globally significant biodiversity hotspot has been subjected to human exploitation and degradation for 1,000s of years. Recently, several initiatives have tried to identify priority areas for conservation across the Mediterranean Sea. However, none of these efforts have led to large-scale actions yet. The aim of the workshop was to establish a network of scientists who are involved in large-scale conservation planning initiatives throughout the Mediterranean basin to promote collaboration and reduce redundancy in conservation initiatives. The three focus groups of the workshop build on existing efforts and intend to deliver: (1) a roadmap for setting conservation priorities, (2) a methodological framework for linking threats, actions and costs to improve the prioritization process, and (3) a systematic conservation planning process tailored to complex environments such as the Mediterranean Sea. Joining forces and involving more scientists (especially from the South-eastern part of the region) in following meetings, the participants endeavour to provide guidelines on how to bridge the science-policy gap and hence aid decision-makers to take efficient conservation actions. [ABSTRACT FROM AUTHOR]

Submarine caves are considered as a top priority for conservation, but the effects of common pressures are poorly known for these habitats. Here, we examined the effect of recreational human visitation on a selection of submarine caves in a Mediterranean Marine Protected Area (40°35′40″N; 8°11′39″E) where diving activities are regulated. Sampling was conducted in visited and not visited caves to assess whether diving activities have a significant effect on cave habitats, what are the components of biodiversity most affected by this disturbance, and its potential effects on spatial heterogeneity of benthic assemblages. Results clearly showed that human visitation could significantly affect spatial patterns of benthic assemblages. Organisms with erect growth forms were significantly more abundant and homogeneously distributed where diving activities are forbidden. An increase in the small-scale heterogeneity of assemblages and a decrease in their three-dimensional structure could be the ultimate consequences of human visitation. The interaction between specific stressors and the patterns of distribution of species and assemblages can drive their spatial heterogeneity also in unique habitats like marine caves, representing an early warning for the development of appropriate management measures. [ABSTRACT FROM AUTHOR]

Summary 1. Taxonomic sufficiency concerns the use of higher-taxon diversity as a surrogate for species diversity. It represents a fast and cost-effective method to assess community responses to natural and anthropogenic environmental drivers. In spite of the potential applications of using higher taxa as surrogates for species, little research has been carried out to determine the underlying reasons that might make taxonomic surrogacy effective for detecting diversity changes. 2. Here, we determine whether the effectiveness of higher taxa as species surrogates relies mostly on taxonomic relatedness of species (i.e. the relative closeness of species in the Linnaean taxonomic hierarchy) or depends simply on the numerical ratio between species and higher taxa (i.e. the degree of species aggregation). We reviewed the current literature on taxonomic sufficiency to check for any correlation between the effectiveness of higher taxa and the degree of species aggregation across different types of organisms. Tests based on random simulations from diverse marine mollusc assemblages were also carried out to ascertain whether the ability of higher taxa to detect variation in the multivariate structure of assemblages depended on the degree of species aggregation. 3. Mollusc data showed that information loss and the ensuing decrease in statistical power to detect natural or human-driven changes in assemblages at higher taxonomic levels depend on the degree of species aggregation, rather than on the taxonomic resolution employed. Analyses of the literature suggested that such outcomes could be generalizable to a wide range of organisms and environmental settings. 4. Our findings do not support the idea of a direct relationship between taxonomic relatedness and ecological similarity among species. This indicates that taxonomic ranks higher than species may not provide ecologically meaningful information, because higher taxa can behave as random groups of species unlikely to convey consistent responses to natural or human-driven environmental changes. 5. Synthesis and applications. Surrogates of species-level information can be based on the 'highest practicable aggregation' of species, irrespective of their taxonomic relatedness. Our findings cast doubt on static taxonomical groupings, legitimizing the use of alternative ways to aggregate species to maximize the use of species surrogacy. [ABSTRACT FROM AUTHOR]

Human activities determine dramatic changes in natural systems, especially in marine coastal areas. This is especially true when economic development is fast and scarcely regulated, representing a serious threat to biodiversity. Besides the obvious prediction of impairment of natural systems, forecasting the effects of human activities can be particularly challenging since they affect species and assemblages, the patterns of distribution and extent of which are often totally unknown. In Vlora Bay, we show through an interdisciplinary project that 15 y of coastal development can result in a loss of over 50% of seagrass cover and a decline in macroalgae cover such as Cystoseira spp., which are structurally and functionally crucial habitats that provide essential goods and services for local human communities and recreation. Furthermore, illegal fishery practices (date mussel fishery, trawling, and use of explosives) contribute to depict a scenario of fragmentation and loss of shallow species-rich assemblages. Large-scale changes in sedimentation patterns have been recognised as one of the main drivers of those changes. This model of development, associated with nearly irreversible environmental consequences, as observed in Albania, can serve as an example for many other Mediterranean areas, showing a combination of high biodiversity and low protection regime. We discuss the urgent need for ecosystem-based management to ensure sustainable development while conserving and managing natural biodiversity and resources. [ABSTRACT FROM AUTHOR]

Abstract: Ecological indicators likely constitute the mainstream tools in assessing the quality of aquatic ecosystems as they condense composite biological information into single measures, easier to handle for environmental managers and more understandable for non-scientific users. However, sampling settings can influence the performance of most indices, and their use is often constrained to specific habitat types. Average taxonomic distinctness (Δ +) and variation in taxonomic distinctness (Λ +) may represent promising tools in overcoming sampling bias, and potentially applicable to a wide range of environmental contexts. In marine systems, such metrics showed higher sensitivity than classical indices in discriminating among perturbed and unperturbed conditions, though a number of studies found Δ + and Λ + also varying along natural gradients, suggesting a lower ability to discern human-driven variations from natural variability than what expected. Here, analyzing existing data sets from previous impact assessment studies, we test the response of Δ + and Λ + in detecting the effects of different sources of anthropogenic disturbance on marine mollusks and polychaetes from Mediterranean soft sediments and hard substrates. Our results showed that neither classical univariate analyses on Δ + and Λ + values nor their associated statistical framework were able to discern among perturbed and unperturbed sites, highlighting a low sensitiveness of such metrics in detecting assemblage variations related to anthropogenic disturbance. Δ + and Λ + are based on presence/absence data, and assume impacts being likely to induce variations in taxonomic structures of assemblages. As a consequence, they could experience reduced discrimination power when impacts mostly affect relative abundances of organisms rather than assemblage composition, or drive species replacement within higher taxa. Our results also showed that habitat type could strongly affect taxonomic relatedness of species within assemblages, and that this effect can vary among different organisms, suggesting that the departures from expectation of Δ + and Λ + values might not be always univocally attributable to human perturbations, since possibly depending on habitat effects. Taxonomic distinctness indices can provide useful additional information on taxonomic diversity of assemblages, crucial to better address the wide concept of biological diversity. However, the effectiveness of such measures in disclosing the effects of human disturbance is still unclear, requiring further investigations especially on their potential application in defining the ecological status of coastal rocky systems. [Copyright &y& Elsevier]

Abstract: Habitat destruction is one of the main threats to environmental integrity. Assessing the consequences of human impacts is crucial both to predict and prevent structural and functional changes of habitats. However, to date almost all studies on marine threats, from regional to global scales, have been entirely qualitative and generally based on little more than expert opinion. We have developed a meta-analytical approach to quantify overall effects of various stressors on different Mediterranean habitat types and to compare the relative importance of different impacts across a range of habitats. We first qualitatively reviewed and synthesized 366 experiments (either manipulative or correlative) collected in the literature. After a selection procedure, we finally quantitatively meta-analyzed 158 experiments. We showed that fisheries (destructive or not), species invasion, aquaculture, sedimentation increase, water degradation and urbanization have negative effects on Mediterranean habitats and associated species assemblages. We also explored the overlap between the impacts identified as important in the Mediterranean and those identified by experts as being important globally, highlighting the inadequacies of relying on expert opinion alone. Finally, we drew attention to the critical lack of empirical knowledge about marine systems in many areas of the Mediterranean, which impedes the implementation of effective conservation measures. Our study is the first to synthesize experimental analyses on human-driven impacts on marine habitats across such a broad geographic scale. [ABSTRACT FROM AUTHOR]

Abstract: Taxonomic Sufficiency (TS) is a promising analysis technique, particularly in light of the current need for rapid and reliable procedures in marine impact assessment and monitoring. However, generalizations are still difficult and there are few studies comparing the effectiveness of TS under different environmental settings. The present study investigates whether reduced taxonomy can be used to detect natural and human-driven patterns of variation in mollusk and polychaete assemblages from subtidal soft and hard bottoms in the Mediterranean. Results showed that, unlike in polychaetes, mollusk families represent effective taxonomic surrogates across a range of environmental contexts. These findings suggest that the mechanisms behind TS in mollusks could act homogeneously across habitats and environmental conditions. In contrast, multiple factors could interact to determine the robustness of polychaetes to taxonomic aggregation. This study highlights the need to go beyond the current pragmatism in this field of work and focus on the reasons underlying TS effectiveness in order to provide a general framework on the application of taxonomic surrogates in marine systems. [Copyright &y& Elsevier]

Aim Virtually all studies exploring the use of taxonomic surrogates in assessing patterns of diversity have focused on clear shifts in the location of samples in multivariate space. The potential use of coarser levels of taxonomic resolution to detect patterns of variability in multivariate space, corresponding to β-diversity in the case of presence/absence data, remains unexplored. Here we considered five ecological data sets of highly diverse marine molluscan assemblages to test the hypothesis that patterns in compositional heterogeneity would be maintained at coarser levels of taxonomic resolution. Location Italy, Norway, New Zealand and the Arctic. Methods We used multivariate dispersion based on the Jaccard resemblance measure of presence/absence data as a measure of β-diversity to test the null hypothesis that patterns of heterogeneity in species composition for molluscs would be maintained at coarser levels of taxonomic resolution. Tests to compare β-diversities among groups (based on distances to centroids and using 9999 permutations) were carried out separately for each of five data sets at the species level and then for each of genus, family, order and class levels. Results Differences in multivariate dispersion at the species level (heterogeneity in the identities of species) were maintained for genera and for families, but not at coarser levels of taxonomic resolution (order or class). These results were consistent across all data sets, despite differences in their spatial scale and extent, geographical location, environmental and habitat features (benthic soft sediments, rocky reefs or kelp holdfasts). Main conclusions These results suggest that either genera or families may be used as effective taxonomic surrogates to detect spatial differences in β-diversity for molluscs. The use of surrogates can provide considerable sampling efficiencies for biodiversity assessments. We consider, however, that a degree of caution and more work is needed, as heterogeneity at the species level may not be reflected by taxonomic surrogates at smaller spatial scales. [ABSTRACT FROM AUTHOR]

Local, regional and global targets have been set to halt marine biodiversity loss. Europe has set its own policy targets to achieve Good Environmental Status (GES) of marine ecosystems by implementing the Marine Strategy Framework Directive (MSFD) across member states. We combined an extensive dataset across five Mediterranean ecoregions including 26 Marine Protected Areas (MPAs), their reference unprotected areas, and a no-trawl case study. Our aim was to assess if MPAs reach GES, if their effects are local or can be detected at ecoregion level or up to a Mediterranean scale, and which are the ecosystem components driving GES achievement. This was undertaken by using the analytical tool NEAT (Nested Environmental status Assessment Tool), which allows an integrated assessment of the status of marine systems. We adopted an ecosystem approach by integrating data from several ecosystem components: the seagrass Posidonia oceanica , macroalgae, sea urchins and fish. Thresholds to define the GES were set by dedicated workshops and literature review. In the Western Mediterranean, most MPAs are in good/high status, with P. oceanica and fish driving this result within MPAs. However, GES is achieved only at a local level, and the Mediterranean Sea, as a whole, results in a moderate environmental status. Macroalgal forests are overall in bad condition, confirming their status at risk. The results are significantly affected by the assumption that discrete observations over small spatial scales are representative of the total extension investigated. This calls for large-scale, dedicated assessments to realistically detect environmental status changes under different conditions. Understanding MPAs effectiveness in reaching GES is crucial to assess their role as sentinel observatories of marine systems. MPAs and trawling bans can locally contribute to the attainment of GES and to the fulfillment of the MSFD objectives. Building confidence in setting thresholds between GES and non-GES, investing in long-term monitoring, increasing the spatial extent of sampling areas, rethinking and broadening the scope of complementary tools of protection (e.g., Natura 2000 Sites), are indicated as solutions to ameliorate the status of the basin. • A comparative assessment of environmental health across the Mediterranean Sea. • Overall, the basin found in a generally moderate environmental status. • Good/high status reached only in the Western Mediterranean Marine Protected Areas. • Seagrasses and fish drive these results. Macroalgae are overall in bad conditions. • Marine Protected Areas are crucial as sentinel observatories of marine systems. [ABSTRACT FROM AUTHOR]

Abstract: Current policies of habitat conservation, recovery, and management are strongly biased in favour of terrestrial systems, being poorly applicable to marine environments. A sound habitat classification, leading to spatially explicit accounts on the distribution of marine habitats and communities, is a prerequisite to identify conservation priorities, based on appropriate methods for assessing habitat sensitivity to human disturbance, aimed at preventing habitat loss. The ten major European marine habitat classifications, recognizing a total of 1121 marine habitats, have been here revised, and their major differences have been formally tested in terms of multivariate dissimilarity. Mediterranean-based classifications resulted rather uniform, their habitats forming a separate cluster from the rest of European ones; these differences might be due to either distinct ecological features, or to divergences in the way habitats are classified. Either too vague or too detailed classifications, leading to cumbersome appreciations of biodiversity at habitat level, fail to provide proper tools for the conservation and management of marine environments. Different species assemblages can inhabit the same habitat type, representing the well-know natural variability that, at large scale, should not affect the appreciation of habitat distribution. Intra-habitat natural variability, in fact, causes a misleading qualitative interpretation of small-scale biodiversity distribution. Mediterranean classifications have been integrated and simplified by identifying habitats according to explicit criteria: level on the shore, type of primary substrate, presence of bioconstructors, presence of habitat formers, presence of ecosystem engineers. The motivating idea is to limit the current emphasis on spatial dominance as the only criteria for the introduction of species, assemblages, and habitats in the lists, towards a clearer recognition of the structural and functional role of biodiversity. The reduction of previous classifications to a list of 94 Mediterranean marine habitat types represents an initial attempt at providing a simple and flexible tool for the evaluation of biodiversity at habitat level, leading to more feasible conservation measures, potentially extendable at European scale. [Copyright &y& Elsevier]

The exploitation of fossil fuels in the Mediterranean Sea will likely lead to an increase in the number of offshore platforms, a recognized threat for marine biodiversity. To date, in this basin, few attempts have been made to assess the impact of offshore gas and oil platforms on the biodiversity of benthic assemblages. Here, we adopted a structured experimental design coupled with high taxonomic resolution to outline putative effects of gas platforms on soft-bottom macrofauna assemblages in the North Ionian Sea. The analysis was based on a total of 20,295 specimens of 405 taxa, almost entirely identified at species level. Multivariate and univariate analyses showed idiosyncratic patterns of assemblage change with increasing distance from the platforms. Potential reasons underlying such inconsistency are analyzed and the view that structured experimental monitoring is a crucial tool to quantify the extent and magnitude of potential threats and to provide sound baseline information on biodiversity patterns is supported. [Copyright &y& Elsevier]

In coastal marine ecosystems, predation might affect spatial distribution and population dynamics of benthic assemblages. Here, by means of experimental exclusion of potential predators, we compared the effects of epibenthic predation on metazoan meiofaunal assemblages on soft and rocky substrates. Different patterns of abundance were observed in uncaged versus caged plots, across habitats. In caged soft substrates, the abundance of Nematodes, Copepods and Polychaetes increased by 56, 45, 57%, respectively, in the first 3 months. An increase in the number of meiofaunal taxa was also observed. The exclusion of predators from rocky substrates showed less clear patterns. It did not affect the number of taxa while a decrease in meiofaunal abundance was observed. Our results suggest that the exclusion of epibenthic predators had clear effect on total metazoan meiofaunal abundance and on the number of taxa, only in soft bottoms. The different impact of predation across habitats can be potentially explained by differences in terms of spatial variability and substrate complexity. We estimated that, coarsely, more than 75% of total metazoan meiofaunal production can be channeled to higher trophic levels through predation on soft-bottoms. Among meiofaunal taxa, Polychaetes and Nematodes provided the major contribution to benthic energy transfers. These results suggest the trophic relevance of metazoan meiofauna in coastal food webs and claim for the refinement of further experiments for the quantification of its role in different ecological systems. [ABSTRACT FROM AUTHOR]

The article examines the impact of fish-farm activities on the biochemistry of the sea floor. The quantity and biochemical composition of sediment organic matter in four different regions in the temperate-warm Mediterranean Sea including the Akrotiri Bay in Cyprus, Sounion Bay in Greece, Pachino Bay in Italy and the Gulf of Alicante in Spain were investigated. Results showed that the quantitative and qualitative changes in the organic loads of sediments that came from intensive aquaculture depend upon the surrounding ecology and cannot be predicted only on the basis of fish-farm attributes and hydrodynamic regimes.

We surveyed shallow, rocky reefs in southwestern Apulia (Mediterranean Sea) to assess the effects on coastal fish assemblages of the date mussel (Lithophaga lithophaga) fishery, an illegal practice that strips the rocky reef bare. We visually sampled fish four times over 15 months at three locations, one affected by datemussel fishery and two controls. The fish assemblage at the affected location differed significantly from those at the control locations over all sampling times. Herbivorous fishes, sparids, and labrids (genus Symphodus) contributed most to the differences between the affected location and controls. Lower densities of Symphodus spp. were observed at the affected location, whereas detritivorous fishes were recorded exclusively at control sites. Small serranids and sparids showed temporal trends that differed between the affected location and the control locations. Our results suggest that the date-mussel fishery affects fish assemblages chiefly through reduction of arborescent macroalgae (contributing to habitat complexity and primary production) and emphasize the need for more effective policing against this destructive practice. [ABSTRACT FROM AUTHOR]

The first record of the kelp species Phyllariopsis brevipes in the Campania Region (Tyrrhenian Sea, South Italy) is here reported. The species has been observed in October 2021 in four sites along Sorrento Peninsula and Capri Island coast during scuba diving surveys. P. brevipes grew on living thalli of crustose coralline algae from 32 up to 55 m depth, occasionally forming dense aggregations with a maximum cover of about 0.2 m2. The DNA barcoding analysis on the basis of the cox1 gene supported the identification, with 98.36% of similarity between the sample collected in this study (NCBI accession number: PP622796) and a sequence obtained from a specimen from Provence, Mediterranean France (NCBI accession number: GQ368264). The study area can be considered a stepping stone for the species dispersion. The occurrence of P. brevipes can be related to upwelling and good water quality and the monitoring of its health status might be a sentinel of environmental changes. [ABSTRACT FROM AUTHOR]

Rhodolith beds represent a key habitat worldwide, from tropical to polar ecosystems. Despite this habitat is considered a hotspot of biodiversity, providing a suite of ecosystem goods and services, still scarce quantitative information is available thus far about rhodolith beds occurrence and ecological role, especially in the Mediterranean Sea. This study reports the composition and patterns of distribution of rhodolith assemblages found in four study areas along ca. 860 km of coast in the Central Mediterranean Sea. These rhodolith beds were studied for the first time and significant differences at all spatial scales have been highlighted, documenting the high variability of this habitat. Rhodolith species composition, morphology and distribution have been discussed considering the potential role of environmental factors in driving these patterns. The need for improving their protection is discussed to complement present conservation and management initiatives, particularly in the frame of the EU Marine Strategy Framework Directive. [ABSTRACT FROM AUTHOR]

Aim: Coralligenous reefs are the main marine bioconstructions in terms of spatial distribution within the Mediterranean basin. Two distinct reef morphologies can be distinguished based on the surface and topographical features of the seafloor: cliffs developing vertical slopes and banks found on gently steep or horizontal bottoms. Despite their importance for monitoring and conservation efforts, observations regarding the variability of biogeographical patterns are scarce. Here, we aimed to assess the differences in the composition and structure of these cliffs across ecoregions and estimate the relative role of abiotic environmental features, geographic location, and connectivity in shaping diversity patterns. Location: The study was carried out in the Central‐Western Mediterranean Sea. Samples were collected at 65 sites across the Algero‐Provençal Basin, the Ionian Sea and the Tyrrhenian Sea. Methods: We assessed the composition and structure of coralligenous cliffs through photographic samplings collected by scuba divers. Patterns in α‐ and β‐diversity were associated with 9 abiotic environmental variables, latitudinal and longitudinal gradients, and connectivity measures using Generalized Additive (GAM) and Conditional Autoregressive (CAR) models. Results: Coralligenous cliffs were primarily composed of algae and displayed a high degree of variability. The Partition Around Medoids (PAM) clustering method successfully delineated seven distinct clusters with a non‐uniform distribution within the studied ecoregions. The α‐diversity increased in eastern and northern sites and with phosphate concentration, while decreased with temperature, chlorophyll and nitrates concentration. β‐diversity at the site level increased with temperature, while it was negatively affected by northward current speed and chlorophyll concentration. Moveover, β‐diversity increased within connected sites. Main Conclusions: Coralligenous cliff diversity responds both to the physico‐chemical features of the habitat and between‐habitats connectivity. However, our findings suggest that small‐scale abiotic and biotic processes could contribute to explaining the variability observed. These findings can significantly enhance the monitoring and conservation efforts of this Mediterranean endemic ecosystem. [ABSTRACT FROM AUTHOR]

In the Anthropocene, marine ecosystems are rapidly shifting to new ecological states. Achieving effective conservation of marine biodiversity has become a fast‐moving target because of both global climate change and continuous shifts in marine policies. How prepared are we to deal with this crisis? We examined EU Member States Programs of Measures designed for the implementation of EU marine environmental policies, as well as recent European Marine Spatial Plans, and discovered that climate change is rarely considered operationally. Further, our analysis revealed that monitoring programs in marine protected areas are often insufficient to clearly distinguish between impacts of local and global stressors. Finally, we suggest that while the novel global Blue Growth approach may jeopardize previous marine conservation efforts, it can also provide new conservation opportunities. Adaptive management is the way forward (e.g., preserving ecosystem functions in climate change hotspots, and identifying and targeting climate refugia areas for protection) using Marine Spatial Planning as a framework for action, especially given the push for Blue Growth. [ABSTRACT FROM AUTHOR]

Fishery is one of the most impacting human activities and is responsible for habitat loss in marine systems. While the effects of large‐scale fisheries have been largely investigated, impacts of small‐scale fisheries (SSF) on seafloor integrity are more often assumed than quantitatively investigated. We carried out a literature review at global scale, resulting in 19 studies with quantitative data on sessile benthic bycatch and only one documenting habitat loss driven by SSF. We also conducted a fine‐scale assessment within a Mediterranean partially protected area (PPA). Results showed that 513 m2 of the Posidonia oceanica meadow are removed annually by local SSF within the PPA, considering bycatch, fishing effort, and shoot density. Knowledge on fishing effort and fine‐scale mapping is critical to assess habitat loss, suggesting the need for specific recommendations for eco‐sustainable local fisheries. [ABSTRACT FROM AUTHOR]