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Trapped-ion quantum information processing may benefit from qubits encoded in isotopes that are practically available in only small quantities, e.g., due to low natural abundance or radioactivity. Laser ablation provides a method of controllably liberating neutral atoms or ions from low-volume targets, but energetic ablation products can be difficult to confine in the small ion-electrode distance, micron-scale microfabricated traps amenable to high-speed, high-fidelity manipulation of ion arrays. Here, we investigate ablation-based ion loading into surface-electrode traps of different sizes to test a model describing ion loading probability as a function of effective trap volume and other trap parameters. We characterize loading of ablated barium from a metallic source in two cryogenic surface-electrode traps with 730 and 50 μm ion-electrode distances. Our loading rate agrees with a predictive analytical model, providing insight for the confinement of limited-quantity species of interest for quantum computing, simulation, and sensing. [ABSTRACT FROM AUTHOR]

Children and adolescents do not participate in enough physical activity (PA) to meet the recommended levels, which stops them from benefiting from regular PA's positive effects on their health. In recent years, technology-based initiatives have provided children and adolescents with a compelling and viable way to encourage PA. Based on the results of previous research, we have conducted this review to gain a better understanding of if and how specific commercially available wearable devices impact physical activity promotion and health in children and adolescents. We have conducted this review, that was based on a theoretical framework of the self-determination theory (SDT), and focused on the impact that wearable devices have on physical activity promotion and health. The electronic databases of Google Scholar, Web of Science, and PubMed were searched between 2010 and 2023 for all available literature. Eleven studies overall satisfied the requirements for inclusion criteria. The sample sizes for the studies ranged from 32 to 502, and they included both boys and girls between the ages of 4 and 14. Wearable technology was used for no less than one week and no more than four months. The current review revealed that commercial wearable activity tracker-based programs among children and adolescents had a positive influence on daily levels of MVPA and step totals, as well as sedentary behavior. [ABSTRACT FROM AUTHOR]

The substantial climate change mitigation potential of restoring peatlands through rewetting and intensifying agriculture to reduce greenhouse gas (GHG) emissions is largely recognized. The green deal in Denmark aims at restoring 100 000 ha of peatlands by 2030. This area corresponds to more than half of the Danish peatland, with an expected reduction in GHG emissions of almost half of the entire land use, land use change and forestry (LULUFC) emissions. Recent advances established the functional relationship between hydrological regimes, i.e., water table depth (WTD), and CO2 and CH4 emissions. This builds the basis for science-based tools to evaluate and prioritize peatland restoration projects. With this article, we lay the foundation of such a development by developing a high-resolution WTD map for Danish peatlands. Further, we define WTD response functions (CO2 and CH4) fitted to Danish flux data to derive a national GHG emission estimate for peat soils. We estimate the annual GHG emissions to be 2.6 MtCO2-eq , which is around 15 % lower than previous estimates. Lastly, we investigate alternative restoration scenarios and identify substantial differences in the GHG reduction potential depending on the prioritization of fields in the rewetting strategy. If wet fields are prioritized, which is not unlikely in a context of a voluntary bottom-up approach, the GHG reduction potential is just 30 % for the first 10 000 ha with respect to a scenario that prioritizes drained fields. This underpins the importance of the proposed framework linking WTD and GHG emissions to guide a spatially differentiated peatland restoration. The choice of model type used to fit the CO2 WTD response function, the applied global warming potentials and uncertainties related to the WTD map are investigated by means of a scenario analysis, which suggests that the estimated GHG emissions and the reduction potential are associated with coefficients of variation of 13 % and 22 %, respectively. [ABSTRACT FROM AUTHOR]

Practical experiments drive important scientific discoveries in biology, but theory‐based research studies also contribute novel—sometimes paradigm‐changing—findings. Here, we appraise the roles of theory‐based approaches focusing on the experiment‐dominated wet‐biology research areas of microbial growth and survival, cell physiology, host–pathogen interactions, and competitive or symbiotic interactions. Additional examples relate to analyses of genome‐sequence data, climate change and planetary health, habitability, and astrobiology. We assess the importance of thought at each step of the research process; the roles of natural philosophy, and inconsistencies in logic and language, as drivers of scientific progress; the value of thought experiments; the use and limitations of artificial intelligence technologies, including their potential for interdisciplinary and transdisciplinary research; and other instances when theory is the most‐direct and most‐scientifically robust route to scientific novelty including the development of techniques for practical experimentation or fieldwork. We highlight the intrinsic need for human engagement in scientific innovation, an issue pertinent to the ongoing controversy over papers authored using/authored by artificial intelligence (such as the large language model/chatbot ChatGPT). Other issues discussed are the way in which aspects of language can bias thinking towards the spatial rather than the temporal (and how this biased thinking can lead to skewed scientific terminology); receptivity to research that is non‐mainstream; and the importance of theory‐based science in education and epistemology. Whereas we briefly highlight classic works (those by Oakes Ames, Francis H.C. Crick and James D. Watson, Charles R. Darwin, Albert Einstein, James E. Lovelock, Lynn Margulis, Gilbert Ryle, Erwin R.J.A. Schrödinger, Alan M. Turing, and others), the focus is on microbiology studies that are more‐recent, discussing these in the context of the scientific process and the types of scientific novelty that they represent. These include several studies carried out during the 2020 to 2022 lockdowns of the COVID‐19 pandemic when access to research laboratories was disallowed (or limited). We interviewed the authors of some of the featured microbiology‐related papers and—although we ourselves are involved in laboratory experiments and practical fieldwork—also drew from our own research experiences showing that such studies can not only produce new scientific findings but can also transcend barriers between disciplines, act counter to scientific reductionism, integrate biological data across different timescales and levels of complexity, and circumvent constraints imposed by practical techniques. In relation to urgent research needs, we believe that climate change and other global challenges may require approaches beyond the experiment. [ABSTRACT FROM AUTHOR]

Introduction: Mutations in the peripherin-2 gene (PRPH2) are a common cause of inherited retinal dystrophies well known for their phenotypic diversity. We describe a novel presentation of the c.623G > A; p.(Gly208Asp) variant in association with cone-rod dystrophy and reduced penetrance. Case description: A 39-year-old man presents with a history of decreased visual acuity, photophobia, and dyschromatopsia. Fundus examination was largely unremarkable while spectral-domain optical coherence tomography (SD-OCT) demonstrated diffuse granularity at the ellipsoid zone. Full-field electroretinogram (ffERG) revealed a cone-rod dystrophy. Genetic testing revealed a heterozygous pathogenic variant, c.623G > A; p.(Gly208Asp), in the PRPH2 gene, also found in an unaffected brother. The 50-year-old brother had no visual symptoms and no findings on fundus examination. SD-OCT showed normal retinal architecture and ffERG was within normal limits bilaterally. Conclusion: This case report broadens the known phenotypic presentations of PRPH2-associated retinopathy and suggests that the PRPH2 variant c.623G > A; p.(Gly208Asp) may be associated with reduced penetrance. [ABSTRACT FROM AUTHOR]

Copyright of Canadian Journal of Agricultural Economics is the property of Wiley-Blackwell and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)

We present the results of a study on the climate forcing effects of replacing coal for power generation in the United Kingdom (UK) with wood pellets produced in northern Ontario, Canada. Continuous wood pellet production from two biomass sources were considered: fiber from increased harvesting of standing live trees (stemwood scenario) and from harvest residue provided by ongoing harvesting operations (residue scenario). In both scenarios, biomass was collected from harvesting operations in two forest management units (FMUs) with contrasting harvest residue treatments: natural decay of slash piles in the Hearst FMU and slash pile burning in the Kenora FMU. Life cycle emissions associated with wood pellets were assessed for production, transportation, and combustion to replace coal at a hypothetical power generating station in the UK. Greenhouse gas (GHG) emissions and removals in wood pellet and coal scenarios were assessed using two methods: global warming potential (GWP)-based mass balance and dynamic life cycle assessment (LCA) approaches. In the stemwood scenario, climate change mitigation from replacing coal with wood pellets was not achieved within the study timeline (2020–2100). In the residue scenario, immediate climate change mitigation was achieved with fiber sourced from the Kenora FMU where the current practice is to burn slash piles; for the Hearst FMU, where slash is allowed to decompose in the forest, climate change mitigation occurred 11.6 and 3.1 years after biomass collection began, as assessed by the mass balance and dynamic LCA methods, respectively. Factors affecting mitigation potential in the studied scenarios are discussed. [ABSTRACT FROM AUTHOR]

For the problem of multiple noises in the visual images captured by CMOS sensors in the γ radiation environment, this paper proposed a two-stage image denoising method based on speckle splitting to improve the clarity of the γ radiation scene image. In the first stage, we first losslessly split the noisy image into multiple sub-images by dilated down-sampling, which makes the speckle noise of the original image decomposed into isolated point noise in the sub-images. And then, the isolated point noise is removed by detection-based median filtering. In the second stage, we present a gradient-guided NLM filtering in YUV color space, which further deals with the residual weak noise derived from the subtle difference between the non-salient speckle edge and background pixels. Extensive experiments are carried out on the practical scene images captured from Co60 γ radiation scene. With the help of our proposed scheme, the quality of noisy image has been obviously improved. Concretely, the PSNR is boosted by 8.17 dB and the SSIM is increased by 0.32. Experimental results demonstrate that the proposed method enjoys state-of-the-art performance in improving the clarity of γ radiation images. [ABSTRACT FROM AUTHOR]

The retina is a highly specialized tissue composed of a network of neurons, glia, and vascular and epithelial cells; all working together to coordinate and transduce visual signals to the brain. The retinal extracellular matrix (ECM) shapes the structural environment in the retina but also supplies resident cells with proper chemical and mechanical signals to regulate cell function and behavior and maintain tissue homeostasis. As such, the ECM affects virtually all aspects of retina development, function and pathology. ECM-derived regulatory cues influence intracellular signaling and cell function. Reversibly, changes in intracellular signaling programs result in alteration of the ECM and downstream ECM-mediated signaling network. Our functional studies in vitro, genetic studies in mice, and multi omics analyses have provided evidence that a subset of ECM proteins referred to as cellular communication network (CCN) affects several aspects of retinal neuronal and vascular development and function. Retinal progenitor, glia and vascular cells are major sources of CCN proteins particularly CCN1 and CCN2. We found that expression of the CCN1 and CCN2 genes is dependent on the activity of YAP, the core component of the hippo-YAP signaling pathway. Central to the Hippo pathway is a conserved cascade of inhibitory kinases that regulate the activity of YAP, the final transducer of this pathway. Reversibly, YAP expression and/or activity is dependent on CCN1 and CCN2 downstream signaling, which creates a positive or negative feedforward loop driving developmental processes (e.g., neurogenesis, gliogenesis, angiogenesis, barriergenesis) and, when dysregulated, disease progression in a range of retinal neurovascular disorders. Here we describe mechanistic hints involving the CCN–Hippo–YAP regulatory axis in retina development and function. This regulatory pathway represents an opportunity for targeted therapies in neurovascular and neurodegenerative diseases. [ABSTRACT FROM AUTHOR]

Copyright of African Journal of Ecology is the property of Wiley-Blackwell and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)

When it comes to greenhouse gas (GHG) reduction, the role of water tables in former peat extraction areas has received considerable interest in recent decades. This study analysed the carbon dioxide (CO2), methane (CH4) and nitrous oxide (N2O) surface-to-atmosphere fluxes from a rewetted and permanently flooded former peat extraction areas in comparison to pristine peatland in hemiboreal Latvia. Measurements of GHG fluxes combined gas sampling using a closed-chamber (opaque) method with the gas chromatography detection method. Among the studied land-use types, the highest annualised CO2 fluxes (soil heterotrophic and autotrophic respiration) were recorded in rewetted former peat extraction areas with restored vegetation and in undisturbed peatland (4.10 ± 0.21 and 3.45 ± 0.21 t CO2-C ha−1 yr−1, respectively), with the lowest in flooded former peat extraction areas (0.55 ± 0.05 t CO2-C ha−1 yr−1); temperature and groundwater level were found to be significant influencing factors. The highest annualised CH4 fluxes were recorded in undisturbed peatland (562.4 ± 155.8 kg CH4-C ha−1 yr−1), followed by about two-fold and ~20-fold smaller CH4 fluxes in flooded and rewetted areas, respectively. N2O fluxes were negligible in all the studied land-use types, with the highest N2O fluxes in undisturbed peatland (0.66 ± 0.41 kg N2O-N ha−1 yr−1). [ABSTRACT FROM AUTHOR]

Introduction: ophthalmic genetics is rapidly evolving globally but is still nascent in much of sub- Saharan Africa, with gaps in knowledge about the burden in the region. This study evaluated the burden and manifestations of genetic eye diseases in children in Ibadan, Nigeria. Methods: this was a hospital-based cross-sectional study in which new and follow-up paediatric eye clinic patients were recruited consecutively at the University College Hospital, Ibadan. Children with genetic eye diseases had comprehensive ocular and systemic examinations, and their pedigrees were charted to determine the probable modes of inheritance. The main outcome variables were the proportion of study participants with genetic eye diseases, the probable modes of inheritance, and the clinical diagnoses. Summary statistics were performed using means and standard deviations for numerical variables and proportions for categorical variables. Results: fifty-two (12%) of 444 children had genetic eye diseases, and their mean (SD) age was 88.8 ± 50.4 months. Thirteen different phenotypic diagnoses were made following the evaluation of the 52 children, including primary congenital glaucoma (13, 25%) and familial non-syndromic cataracts (8, 15%). The probable modes of inheritance were derived from the pedigree charts, and 30 (58%) conditions were presumed to be sporadic. Conclusion: this study demonstrated a significant burden and a wide range of paediatric genetic eye diseases in this tertiary referral centre in Nigeria. This information provides invaluable evidence for planning ophthalmic genetic services. [ABSTRACT FROM AUTHOR]

Environmental influences on community structure are often assessed through multivariate analyses in order to relate microbial abundances to separately measured physicochemical variables. However, genes and proteins are themselves chemical entities; in combination with genome databases, differences in microbial abundances directly encode for chemical variability. We predicted that the carbon oxidation state of estimated community proteomes, obtained by combining taxonomic abundances from published 16S rRNA gene sequencing datasets with reference microbial proteomes from the NCBI Reference Sequence (RefSeq) database, would reflect environmental oxidation-reduction conditions. Analysis of multiple datasets confirms the geobiochemical predictions for environmental redox gradients in hydrothermal systems, stratified lakes and marine environments, and shale gas wells. The geobiochemical signal is largest for the steep redox gradients associated with hydrothermal systems and between injected water and produced fluids from shale gas wells, demonstrating that microbial community composition can be a chemical proxy for environmental redox gradients. Although estimates of oxidation state from 16S amplicon and metagenomic sequences are correlated, the 16S-based estimates show stronger associations with redox gradients in some environments. [ABSTRACT FROM AUTHOR]

Rhodopsin is a light-sensitive G protein-coupled receptor that initiates the phototransduction cascade in rod photoreceptors. Mutations in the rhodopsinencoding gene RHO are the leading cause of autosomal dominant retinitis pigmentosa (ADRP). To date, more than 200 mutations have been identified in RHO. The high allelic heterogeneity of RHO mutations suggests complicated pathogenic mechanisms. Here, we discuss representative RHO mutations as examples to briefly summarize the mechanisms underlying rhodopsin-related retinal dystrophy, which include but are not limited to endoplasmic reticulum stress and calcium ion dysregulation resulting from protein misfolding, mistrafficking, and malfunction. Based on recent advances in our understanding of disease mechanisms, various treatment methods, including adaptation, whole-eye electrical stimulation, and small molecular compounds, have been developed. Additionally, innovative therapeutic treatment strategies, such as antisense oligonucleotide therapy, gene therapy, optogenetic therapy, and stem cell therapy, have achieved promising outcomes in preclinical disease models of rhodopsin mutations. Successful translation of these treatment strategies may effectively ameliorate, prevent or rescue vision loss related to rhodopsin mutations. [ABSTRACT FROM AUTHOR]

RAPOC (Rosseland and Planck Opacity Converter) is a Python 3 code that calculates Rosseland and Planck mean opacities (RPMs) from wavelength-dependent opacities for a given temperature, pressure, and wavelength range. In addition to being user-friendly and rapid, RAPOC can interpolate between discrete data points, making it flexible and widely applicable to the astrophysical and Earth-sciences fields, as well as in engineering. RAPOC uses ExoMol, DACE, or any user defined input data, provided that it is in a readable format. In this paper, we present the RAPOC code and compare its calculated Rosseland and Planck mean opacities with other values in the literature. RAPOC is open-source and available on Pypi and GitHub. [ABSTRACT FROM AUTHOR]

The study of the dynamics of mycobiota during composting the cow manure and wheat straw was carried out, using DNA barcoding and cultural method. Fungi of phyla Ascomycota, Basidiomycota, Mortierellomycota, Chytridiomycota, Rozellomycota and Aphelidiomycota have been found using DNA barcoding. Cultural (plating) method identified fungi of phyla Ascomycota, Basidiomycota, Mucoromycota. All the orders of fungi determined by the plating method, with the exception of Saccharomycetales in Ascomycota and Mucorales in Mucoromycota, have been also discovered using DNA barcoding, but many other orders have been identified using the latter method. The coincidence of the species detected by both methods was very rare. The changes in the number of colony-forming and operational-taxonomic units of taxa of different levels have been observed during the transformation of manure with straw into compost. The DNA barcoding allowed to identify more fully the changes in the taxonomic and ecological-trophic structure of the fungal community during composting of manure and straw. They were manifested in a significant increase in the representation of basidiomycetes, especially Coprinus spp., Coprinellus spp., in compost, capable to transform lignin, complex organic substances of manure, and a decrease of the fraction of abundantly spore-bearing "sugars" and cellulolytic ascomycetes predominating in the initial substrates: Sordariomycetes in manure and Dothideomycetes in straw. Significant rearrangements occurred during composting in the composition of coprophilic, epiphytic, and phytopathogenic fungi. The importance of toxin-forming, allergenic, and thermophilic species of fungi that pose a danger to human health, and the possibility of assessing the readiness of compost for application to the soil as a biofertilizer, taking into account data on mycobiota, have been discussed. [ABSTRACT FROM AUTHOR]

The mid-infrared spectral region provides a unique window into the atmospheric temperature, chemistry, and dynamics of the giant planets. From more than a century of mid-infrared remote sensing, progressively clearer pictures of the composition and thermal structure of these atmospheres have emerged, along with a greater insight into the processes that shape them. Our knowledge of Jupiter and Saturn has benefitted from their proximity and relatively warm temperatures, while the details of colder and more distant Uranus and Neptune are limited as these planets remain challenging targets. As the timeline of observations continues to grow, an understanding of the temporal and seasonal variability of the giant planets is beginning to develop with promising new observations on the horizon. [ABSTRACT FROM AUTHOR]

Holoprosencephaly (HPE) is the most common malformation of the prosencephalon in humans. It is characterized by a continuum of structural brain anomalies resulting from the failure of midline cleavage of the prosencephalon. The three classic subtypes of HPE are alobar, semilobar and lobar, although a few additional categories have been added to this original classification. The severity of the clinical phenotype is broad and usually mirrors the radiologic and associated facial features. The etiology of HPE includes both environmental and genetic factors. Disruption of sonic hedgehog (SHH) signaling is the main pathophysiologic mechanism underlying HPE. Aneuploidies, chromosomal copy number variants and monogenic disorders are identified in a large proportion of HPE patients. Despite the high postnatal mortality and the invariable presence of developmental delay, recent advances in diagnostic methods and improvements in patient management over the years have helped to increase survival rates. In this review, we provide an overview of the current knowledge related to HPE, and discuss the classification, clinical features, genetic and environmental etiologies and management. [ABSTRACT FROM AUTHOR]

Aspergillosis encompasses a wide range of clinical conditions based on the interaction between Aspergillus and the host. It ranges from colonization to invasive aspergillosis. The human lung provides an entry door for Aspergillus. Aspergillus has virulence characteristics such as conidia, rapid growth at body temperature, and the production of specific proteins, carbohydrates, and secondary metabolites that allow A. fumigatus to infiltrate the lung's alveoli and cause invasive aspergillosis. Alveolar epithelial cells play an important role in both fungus clearance and immune cell recruitment via cytokine release. Although the innate immune system quickly clears conidia in immunocompetent hosts, A. fumigatus has evolved multiple virulence factors in order to escape immune response such as ROS detoxifying enzymes, the rodlet layer, DHN-melanin and toxins. Bacterial co-infections or interactions can alter the immune response, impact Aspergillus growth and virulence, enhance biofilm formation, confound diagnosis, and reduce treatment efficacy. The gut microbiome's makeup influences pulmonary immune responses generated by A. fumigatus infection and vice versa. The real-time PCR for Aspergillus DNA detection might be a particularly useful tool to diagnose pulmonary aspergillosis. Metagenomics analyses allow quick and easy detection and identification of a great variety of fungi in different clinical samples, although optimization is still required particularly for the use of NGS techniques. This review will analyze the current state of aspergillosis in light of recent discoveries in the microbiota and mycobiota., (© 2024. The Author(s), under exclusive licence to Springer Nature B.V.)

Climate change (CC) necessitates reforestation/afforestation programs to mitigate its impacts and maximize carbon sequestration. But comprehending how tree growth, a proxy for fitness and resilience, responds to CC is critical to maximize these programs' effectiveness. Variability in tree response to CC across populations can notably be influenced by the standing genetic variation encompassing both neutral and adaptive genetic diversity. Here, a framework is proposed to assess tree growth potential at the population scale while accounting for standing genetic variation. We applied this framework to black spruce (BS, Picea mariana [Mill] B.S.P.), with the objectives to (1) determine the key climate variables having impacted BS growth response from 1974 to 2019, (2) examine the relative roles of local adaptation and the phylogeographic structure in this response, and (3) project BS growth under two Shared Socioeconomic Pathways while taking standing genetic variation into account. We modeled growth using a machine learning algorithm trained with dendroecological and genetic data obtained from over 2600 trees (62 populations divided in three genetic clusters) in four 48-year-old common gardens, and simulated growth until year 2100 at the common garden locations. Our study revealed that high summer and autumn temperatures negatively impacted BS growth. As a consequence of warming, this species is projected to experience a decline in growth by the end of the century, suggesting maladaptation to anticipated CC and a potential threat to its carbon sequestration capacity. This being said, we observed a clear difference in response to CC within and among genetic clusters, with the western cluster being more impacted than the central and eastern clusters. Our results show that intraspecific genetic variation, notably associated with the phylogeographic structure, must be considered when estimating the response of widespread species to CC., (© 2024 His Majesty the King in Right of Canada and The Author(s). Global Change Biology published by John Wiley & Sons Ltd. Reproduced with the permission of the Minister of Natural Resources Canada.)

Recently burned boreal forests have lower aboveground fuel loads, generating a negative feedback to subsequent wildfires. Despite this feedback, short-interval reburns (≤20 years between fires) are possible under extreme weather conditions. Reburns have consequences for ecosystem recovery, leading to enduring vegetation change. In this study, we characterize the strength of the fire-fuel feedback in recently burned Canadian boreal forests and the weather conditions that overwhelm resistance to fire spread in recently burned areas. We used a dataset of daily fire spread for thousands of large boreal fires, interpolated from remotely sensed thermal anomalies to which we associated local weather from ERA5-Land for each day of a fire's duration. We classified days with >3 ha of fire growth as spread days and defined burned pixels overlapping a fire perimeter ≤20 years old as short-interval reburns. Results of a logistic regression showed that the odds of fire spread in recently burned areas were ~50% lower than in long-interval fires; however, all Canadian boreal ecozones experienced short-interval reburning (1981-2021), with over 100,000 ha reburning annually. As fire weather conditions intensify, the resistance to fire spread declines, allowing fire to spread in recently burned areas. The weather associated with short-interval fire spread days was more extreme than the conditions during long-interval spread, but overall differences were modest (e.g. relative humidity 2.6% lower). The frequency of fire weather conducive to short-interval fire spread has significantly increased in the western boreal forest due to climate warming and drying (1981-2021). Our results suggest an ongoing degradation of fire-fuel feedbacks, which is likely to continue with climatic warming and drying., (© 2024 His Majesty the King in Right of Canada. Global Change Biology published by John Wiley & Sons Ltd. Reproduced with the permission of the Minister of Natural Resources Canada.)

Non-enzymatic template-directed primer extension is increasingly being studied for the production of RNA and DNA. These reactions benefit from producing RNA or DNA in an aqueous, protecting group free system, without the need for expensive enzymes. However, these primer extension reactions suffer from a lack of fidelity, low reaction rates, low overall yields, and short primer extension lengths. This review outlines a detailed mechanistic pathway for non-enzymatic template-directed primer extension and presents a review of the thermodynamic driving forces involved in entropic templating. Through the lens of entropic templating, the rate and fidelity of a reaction are shown to be intrinsically linked to the reactivity of the activating agent used. Thus, a strategy is discussed for the optimization of non-enzymatic template-directed primer extension, providing a path towards cost-effective in vitro synthesis of RNA and DNA., (© 2024 The Authors. ChemBioChem published by Wiley-VCH GmbH.)

We present Hubble Space Telescope (HST) transit observations of the Hot-Jupiter WASP-79 b acquired with the Space Telescope Imaging Spectrograph (STIS) in the near ultraviolet (NUV). Two transit observations, part of the PanCET program, are used to obtain the transmission spectra of the planet between 2280 and 3070 Å. We correct for systematic effects in the raw data using the jitter engineering parameters and polynomial modelling to fit the white light curves of the two transits. We observe an increase in the planet-to-star radius ratio at short wavelengths, but no spectrally resolved absorption lines. The difference between the radius ratios at 2400Å and 3000Å reaches 0.0191 ± 0.0042 (~4.5-s). Although the NUV transmission spectrum does not show evidence of hydrodynamical escape, the strong atmospheric features are likely due to species at very high altitudes. We performed a 1D simulation of the temperature and composition of WASP-79 b using Exo-REM. The temperature pressure profile crosses condensation curves of radiatively active clouds, particularly MnS, Mg2SiO4, Fe, and Al2O3. Still, none of these species produces the level of observed absorption at short wavelengths and can explain the observed increase in the planet's radius. WASP-79 b's transit depth reaches 23 scale height, making it one of the largest spectral features observed in an exoplanet at this temperature (~1700 K). The comparison of WASP-79 b's transmission spectrum with three warmer hot Jupiters shows a similar level of absorption toWASP-178 b andWASP-121 b between 0.2 and 0.3 µm, while HAT-P-41 b's spectrum is flat. The features could be explained by SiO absorption. [ABSTRACT FROM AUTHOR]

Context. Young giant planets are the best targets for characterization with direct imaging. The Medium Resolution Spectrometer (MRS) of the Mid-Infrared Instrument (MIRI) of the recently launched James Webb Space Telescope (JWST) will give access to the first spectroscopic data for direct imaging above 5 µm with unprecedented sensitivity at a spectral resolution of up to 3700. This will provide a valuable complement to near-infrared data from ground-based instruments for characterizing these objects. Aims. We aim to evaluate the performance of MIRI/MRS in detecting molecules in the atmosphere of exoplanets and in constraining atmospheric parameters using Exo-REM atmospheric models. Methods. The molecular mapping technique based on cross-correlation with synthetic models was recently introduced. We test this promising detection and characterization method on simulated MIRI/MRS data. Results. Directly imaged planets can be detected with MIRI/MRS, and we are able to detect molecules (H2O, CO, NH3, CH4, HCN, PH3, CO2) at various angular separations depending on the strength of the molecular features and brightness of the target. We find that the stellar spectral type has a weak impact on the detection level. This method is globally most efficient for planets with temperatures below 1500 K, for bright targets, and for angular separations of greater than 1′′. Our parametric study allows us to anticipate the ability to characterize planets that will be detected in the future. Conclusions. The MIRI/MRS will give access to molecular species not yet detected in exoplanetary atmospheres. The detection of molecules acting as indicators of the temperature of the planets will make it possible to discriminate between various hypotheses of the preceding studies, and the derived molecular abundance ratios should bring new constraints on planet-formation scenarios. [ABSTRACT FROM AUTHOR]

Numerous studies claim that rewetting interventions reduce CO2 and increase CH4 fluxes. To verify the claim, we conducted a systematic review and meta-analysis of the effects of rewetting on CO2 and CH4 fluxes and dissolved organic carbon (DOC). We identified 28 primary articles eligible for meta-analysis, from which we calculated 48 effect sizes for CO2 emissions, 67 effect sizes for CH4 emissions, and 5 effect sizes for DOC. We found that rewetting significantly decreased CO2 fluxes, with temperate zones showing the highest Hedges' g effect size (−0.798 ± 0.229), followed by tropical (−0.338 ± 0.269) and boreal (−0.209 ± 0.372) zones. Meanwhile, rewetting increased CH4 fluxes, with the highest Hedges' g effect size shown in temperate zones (1.108 ± 0.144), followed by boreal (0.805 ± 0.183) and tropical (0.096 ± 0.284) zones. In addition, based on yearly monitoring after rewetting, the CH4 emissions effect size increased significantly over the first 4 years (r2 = 0.853). Overall, the rewetting intervention reduced CO2 emissions by −1.43 ± 0.35 Mg CO2–C ha−1 year−1, increased CH4 emissions by 0.033 ± 0.003 Mg CH4–C ha−1 year−1, and had no significant impact on DOC. To improve the precision and reduce the bias of rewetting effect size quantification, it is recommended to conduct more experimental studies with extended monitoring periods using larger sample sizes and apply the before-after control-impact study design, especially in boreal and tropical climate zones. [ABSTRACT FROM AUTHOR]