201. Preferential selection of adenosines for modification by double-stranded RNA adenosine deaminase.
- Author
-
Polson AG and Bass BL
- Subjects
- Base Sequence, Deamination, Endoribonucleases metabolism, Inosine metabolism, Molecular Sequence Data, Oligoribonucleotides, RNA chemical synthesis, RNA metabolism, RNA Editing, Receptors, Glutamate genetics, Receptors, Glutamate metabolism, Ribonuclease T1 metabolism, Adenosine metabolism, Adenosine Deaminase metabolism, RNA-Binding Proteins metabolism
- Abstract
Double-stranded RNA adenosine deaminase (dsRAD), previously called the double-stranded RNA (dsRNA) unwinding/modifying activity, modifies adenosines to inosines within dsRNA. We used ribonuclease U2 and a mutant of ribonuclease T1 to map the sites of modification in several RNA duplexes. We found that dsRAD had a 5' neighbor preference (A = U > C > G) but no apparent 3' neighbor preference. Further, the proximity of the strand termini affected whether an adenosine was modified. Most importantly, dsRAD exhibited selectivity, modifying a minimal number of adenosines in short dsRNAs. Our results suggest that the specific editing of glutamate receptor subunit B mRNA could be performed in vivo by dsRAD without the aid of specificity factors, and support the hypothesis that dsRAD is responsible for hypermutations in certain RNA viruses.
- Published
- 1994
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