201. Asb4, Ata3, and Dcn Are Novel Imprinted Genes Identified by High-Throughput Screening Using RIKEN cDNA Microarray
- Author
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Hiroshi Amanuma, Yukiko Katsuzawa, Mitsuo Oshimura, Yusuke Sotomaru, Makiko Meguro, Jun Kawai, Tomohiro Kono, H. Kiyosawa, Yasuhiro Tomaru, Yosuke Mizuno, Itoshi Nikaido, Yasushi Okazaki, and Yoshihide Hayashizaki
- Subjects
Male ,Amino Acid Transport System A ,Microarray ,High-throughput screening ,Biophysics ,Nerve Tissue Proteins ,Biology ,Autoantigens ,Biochemistry ,snRNP Core Proteins ,Genomic Imprinting ,Mice ,Insulin-Like Growth Factor II ,Complementary DNA ,Animals ,Genetic Testing ,Allele ,Molecular Biology ,Gene ,Oligonucleotide Array Sequence Analysis ,Genetics ,Extracellular Matrix Proteins ,Gene Expression Profiling ,Membrane Proteins ,Cell Biology ,Embryo, Mammalian ,Ribonucleoproteins, Small Nuclear ,Molecular biology ,Ankyrin Repeat ,Mice, Inbred C57BL ,Female ,Proteoglycans ,Ankyrin repeat ,Neuronatin ,Decorin ,Carrier Proteins ,Genomic imprinting - Abstract
Genes differentially expressed between parthenogenetic and androgenetic embryos are candidates for the identification of imprinted genes, which are expressed specifically from the maternal or paternal allele. To search for genes differentially expressed between parthenogenetic and androgenetic embryos, we used the RIKEN full-length enriched mouse cDNA microarray. The 25 candidates obtained included 8 known imprinted genes (such as IgfII, Snrpn, and Neuronatin) and 3 new ones—Asb4 (ankyrin repeat and SOCS box-containing protein 4), Ata3 (amino acid transport system A3), and Decorin—which were confirmed by using normal diploid embryos from the reciprocal F1 crosses of B6 and JF1 mice. The 25 candidates also included genes that showed no imprinting-associated expression in normal diploid embryos. We describe a feasible high-throughput method of screening for novel imprinted genes by using the RIKEN cDNA microarray.
- Published
- 2002