670 results on '"Agata, K."'
Search Results
202. Costimulation with Dexamethasone and Prostaglandin E2: A Novel Paradigm for the Induction of T-Cell Anergy
- Author
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Elliott, Lucinda H., primary and Levay, Agata K., additional
- Published
- 1997
- Full Text
- View/download PDF
203. Dexamethasone and Prostaglandin E2Modulate T-Cell Receptor Signaling through a cAMP-Independent Mechanism
- Author
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Elliott, Lucinda H., primary, Levay, Agata K., additional, Sparks, Brad, additional, Miller, Marianne, additional, and Roszman, Thomas L., additional
- Published
- 1996
- Full Text
- View/download PDF
204. Genetic characterization of the multipotent dedifferentiated state of pigmented epithelial cells in vitro
- Author
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Agata, K., primary, Kobayashi, H., additional, Itoh, Y., additional, Mochii, M., additional, Sawada, K., additional, and Eguchi, G., additional
- Published
- 1993
- Full Text
- View/download PDF
205. POU-Domain Genes in Planarian Dugesia japonica: The Structure and Expression
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Orii, H., primary, Agata, K., additional, and Watanabe, K., additional
- Published
- 1993
- Full Text
- View/download PDF
206. EG-Integration und Deutscher Föderalismus
- Author
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Agata, K., primary
- Published
- 1993
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- View/download PDF
207. Analysis of genes whose expression is regulated during lens transdifferentiation in vitro
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Agata, K., primary and Eguchi, G., additional
- Published
- 1992
- Full Text
- View/download PDF
208. Gene expression of growth factors and their receptors during development and regeneration of chicken eye, as revealed by in situ hybridization
- Author
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Ohuchi, H., primary, Noji, S., additional, Agata, K., additional, Nohno, T., additional, Koyama, E., additional, Myokai, F., additional, Nishikawa, K., additional, Matsuo, T., additional, Eguchi, G., additional, Taniguchi, S., additional, and Matsuo, N., additional
- Published
- 1992
- Full Text
- View/download PDF
209. Testing the Bio-compatibility of Aluminum PDFU BRIC Hardware.
- Author
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Schultz, Eric R., Zupanska, Agata K., Manning-Roach, Susan, Camacho, Jose, Levine, Howard, Paul, Anna-Lisa, and Ferl, Robert J.
- Subjects
- *
SPACE environment , *SPACE biology , *TOXICOLOGY of aluminum , *PLANT growth - Abstract
Biological research in an orbital environment necessitates the containment of the sample and its associated chemical fixatives. The Biological Research in Canisters (BRIC) hardware developed by Kennedy Space Center has been widely used in several configurations to support biological experiments on the Shuttle and the International Space Station (ISS). The current model of BRIC hardware contains six Petri Dish Fixation Units (PDFUs), each of which holds one Petri plate containing the specimen. This study compares traditional polycarbonate PDFUs to PDFUs primarily composed of aluminum with respect to their biocompatibility with Arabidopsis thaliana (Arabidopsis) growth and development. Seeds were planted on nutrient agar plates and inserted into either polycarbonate or aluminum PDFUs, which were then secured in the BRIC hardware. Plates were allowed to develop in the PDFUs in the dark for a period of 12 days, after which they were preserved by either RNAlater or glutaraldehyde, harvested, photographed, RNA-extracted, and prepared for gene expression analyses. Direct comparison of the etiolated Arabidopsis seedlings from the polycarbonate and aluminum PDFUs presented no discernible morphological differences, nor were there any significant differences between the expression levels of several target genes chosen for their sensitivity in reporting an aluminum stress response. [ABSTRACT FROM AUTHOR]
- Published
- 2012
210. Regulatory T cells fail to suppress CD4+ T-bet+ T cells in relapsing multiple sclerosis patients.
- Author
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Frisullo, Giovanni, Nociti, Viviana, Iorio, Raffaele, Patanella, Agata K., Caggiula, Marcella, Marti, Alessandro, Sancricca, Cristina, Angelucci, Francesco, Mirabella, Massimiliano, Tonali, Pietro A., and Batocchi, Anna P.
- Subjects
T cells ,CD4 antigen ,MULTIPLE sclerosis ,DISEASE relapse ,DISEASE remission ,PATIENTS - Abstract
Multiple sclerosis (MS) is a chronic inflammatory demyelinating disease of the central nervous system and a defect in the regulatory T-cell subset seems to be involved in the pathogenesis of the disease. Foxp3 is a transcription factor that is selectively expressed in CD4
+ CD25+ regulatory T cells and is required for their development and function. T-bet is a key transcription factor for the development of T helper 1 (Th1) cells. We found that both the percentage of circulating CD4+ CD25+ Foxp3+ cells and Foxp3 expression were lower in relapsing-remitting (RR) MS patients during relapses than during remission. Otherwise, the percentage of CD4+ T-bet+ T cells and T-bet expression in CD4+ T cells were higher in relapsing than in remitting RRMS patients. CD4+ CD25+ T cells both from relapsing and from remitting RRMS patients showed significantly less capacity than corresponding cells from healthy subjects to suppress autologous CD4+ CD25− T-cell proliferation, despite a similar Foxp3 expression level. CD4+ CD25+ T cells from healthy subjects and patients in remission clearly reduced T-bet mean fluorescence intensity (MFI) in CD4+ CD25− T cells up to a ratio of 1:10, whereas CD4+ CD25+ T cells from patients in relapse were able to reduce T-bet expression only at a high ratio. Our data indicate that the increased number of regulatory T (T-reg) cells and the increased Foxp3 expression in circulating CD4+ CD25+ T cells may contribute to the maintenance of tolerance in the remission phase of MS. Moreover, the inhibitory capacity of CD4+ CD25+ T cells seems to be impaired in relapsing patients under inflammatory conditions, as shown by the high levels of T-bet expression in CD4+ T cells. [ABSTRACT FROM AUTHOR]- Published
- 2009
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- View/download PDF
211. Cytogenetic assignment of 29 functional genes to chicken microchromosomes by FISH.
- Author
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Suzuki, T., Kurosaki, T., Agata, K., Koide, M., Shimada, K., Kansaku, N., Namikawa, T., and Matsuda, Y.
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ANIMAL genome mapping ,LINKAGE (Genetics) ,CHROMOSOMES ,GENOMES ,CHICKENS ,FLUORESCENCE in situ hybridization - Abstract
We assigned 29 functional genes to chicken microchromosomes by fluorescence in situ hybridization (FISH). Two linkage groups in the genetic linkage map of the East Lansing breed were identified in this study by localizing the genes AGRN and H2FA to microchromosomes. The frequency of the genes mapped on 30 pairs of microchromosomes, which account for roughly 30% of the whole chicken genome, was about 40% of the 73 genes randomly mapped in our laboratory. This result confirms the important role of microchromosomes for avian genome function and supports the likelihood of a high gene density on avian microchromosomes. Copyright © 2000 S. Karger AG, Basel [ABSTRACT FROM AUTHOR]
- Published
- 1999
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- View/download PDF
212. Cytogenetic mapping of 31 functional genes on chicken chromosomes by direct R-banding FISH.
- Author
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Suzuki, T., Kurosaki, T., Shimada, K., Kansaku, N., Kuhniein, U., Zadworny, D., Agata, K., Hashimoto, A., Koide, M., Koike, M., Takata, M., Kuroiwa, A., Minai, S., Namikawa, T., and Matsuda, Y.
- Subjects
FLUORESCENCE in situ hybridization ,CHROMOSOMES ,THYMIDINE ,LINKAGE (Genetics) ,HUMAN chromosomes ,CHICKENS as laboratory animals - Abstract
Using direct R-banding fluorescence in situ hybridization, we determined the location of 31 functional genes on chicken chromosomes. Replication R-banded chromosomes were obtained by synchronizing splenocyte cultures with excessive thymidine, followed by BrdU treatment. Thirty-one functional genes were directly localized to banded chicken chromosomes using genomic DNA and cDNA fragments as probes. The possibility of conserved linkage homology between chicken and human chromosomes was demonstrated for seven chicken chromosome regions (1p, 1q, 2q, 4p, 4q, and 5q). Copyright © 1999 S. Karger AG, Basel [ABSTRACT FROM AUTHOR]
- Published
- 1999
- Full Text
- View/download PDF
213. Effects of germinated barley foodstuff on dextran sulfate sodium-induced colitis in rats.
- Author
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Kanauchi, Osamu, Nakamura, Tomohiko, Agata, Kazue, Mitsuyama, Keiichi, Iwanaga, Toshihiko, Kanauchi, O, Nakamura, T, Agata, K, Mitsuyama, K, and Iwanaga, T
- Subjects
ULCERATIVE colitis ,INFLAMMATION ,BARLEY - Abstract
Germinated barley foodstuff (GBF), derived from the aleurone and scutellum fractions of germinated barley, is rich in glutamine and low-lignified hemicellulose, and increases mucosal protein, RNA, and DNA content in the intestine when fed to normal rats. The aim of this study was to evaluate the effects of feeding GBF or germinated gramineous seeds on experimental ulcerative colitis. Sprague-Dawley rats that received 3% dextran sulfate sodium in their diets were used as an experimental colitis model. The effects of sulfasalazine, a drug used to treat inflammatory bowel disease, were compared with those of GBF. After rats had consumed diets containing GBF or various aleurone and scutellum fractions, mucosal damage; the content of mucosal protein, RNA, and DNA in the colo-rectum; and serum interleukin-8 and alpha1-acid glycoprotein levels were assessed. GBF and germinated seeds more effectively prevented bloody diarrhea and mucosal damage in colitis compared with controls and rats receiving sulfasalazine, but non-germinated samples did not have a protective effect. GBF increased mucosal protein and RNA content in the colitis model. The consumption of GBF appears to prevent inflammation in a colitis model, and its effect seems to be related to the germination process. GBF and germinated seeds have the potential to serve as nutritional therapy for ulcerative colitis. [ABSTRACT FROM AUTHOR]
- Published
- 1998
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214. Shedding of TNF receptors in multiple sclerosis patients
- Author
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Jurewicz, Anna M., Walczak, Agata K., and Selmaj, Krzysztof W.
- Abstract
To evaluate the rate of shedding of tumor necrosis factor (TNF) receptors (TNFRs) in MS patients.
- Published
- 1999
215. Ectopic pharynxes arise by regional reorganization after anterior/posterior chimera in planarians
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Kobayashi, C., Nogi, T., Watanabe, K., and Agata, K.
- Published
- 1999
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216. Establishment of a novel human myeloid leukaemia cell line (HNT-34) with t(3;3)(q21;q26), t(9;22)(q34;q11) and the expression of EVI1 gene, P210 and P190 BCR/ABL chimaeric transcripts from a patient with AML after MDS with 3q21q26 syndrome
- Author
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amaguchi, H iroyuki H, uzukawa, K azumi S, agata, K aoru N, amamoto, K atsuya Y, agasaki, F umiharu Y, and orishita, K azuhiro M
- Abstract
A novel human myeloid leukaemia cell line (HNT-34) was established from the peripheral blood of a 45-year-old female patient with acute myelogenous leukaemia (AML) transformed from chronic myelomonocytic leukaemia (CMMoL) with 3q21q26 syndrome. Morphologically, the HNT-34 cells were undifferentiated blasts which were negative for myeloperoxidase. The HNT-34 cells were positive for CD4, CD13, CD33 and CD34, but negative for CD41a and CD42b. The cells actively proliferated in suspension with a doubling time of 26–27 h in the absence of any growth factors. Neither proliferative advantage nor differentiation was observed with the addition of G-CSF, GM-CSF, IL-3, TPO, DMSO or PMA. Cytogenetic analysis showed 46,XX, t(3;3)(q21;q26), t(9;22)(q34;q11),20q−. Molecular analysis showed expression of EVI1 gene, P210 and P190 BCR/ABL chimaeric transcripts. The chromosomal breakpoint at 3q26 of HNT-34 cell line was located to approximately 200 kb 5′ of FIM3 locus and more upstream of the MDS1, which is the same region as that of somatic cell hybrid line H10C. The breakpoint at 3q21 was located within the 390 kb centromeric from the breakpoint cluster region. These results suggest that the HNT-34 cell line may be a useful tool for the elucidation of the mechanisms of leukaemogenesis which involve the 3q21q26 syndrome and Ph1 chromosome.
- Published
- 1997
217. HSFA2 Functions in the Physiological Adaptation of Undifferentiated Plant Cells to Spaceflight.
- Author
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Zupanska, Agata K., LeFrois, Collin, Ferl, Robert J., and Paul, Anna-Lisa
- Subjects
- *
PLANT cells & tissues , *HEAT shock factors , *ARABIDOPSIS thaliana , *ENDOPLASMIC reticulum , *GENE expression - Abstract
Heat Shock Factor A2 (HsfA2) is part of the Heat Shock Factor (HSF) network, and plays an essential role beyond heat shock in environmental stress responses and cellular homeostatic control. Arabidopsis thaliana cell cultures derived from wild type (WT) ecotype Col-0 and a knockout line deficient in the gene encoding HSFA2 (HSFA2 KO) were grown aboard the International Space Station (ISS) to ascertain whether the HSF network functions in the adaptation to the novel environment of spaceflight. Microarray gene expression data were analyzed using a two-part comparative approach. First, genes differentially expressed between the two environments (spaceflight to ground) were identified within the same genotype, which represented physiological adaptation to spaceflight. Second, gene expression profiles were compared between the two genotypes (HSFA2 KO to WT) within the same environment, which defined genes uniquely required by each genotype on the ground and in spaceflight-adapted states. Results showed that the endoplasmic reticulum (ER) stress and unfolded protein response (UPR) define the HSFA2 KO cells' physiological state irrespective of the environment, and likely resulted from a deficiency in the chaperone-mediated protein folding machinery in the mutant. Results further suggested that additional to its universal stress response role, HsfA2 also has specific roles in the physiological adaptation to spaceflight through cell wall remodeling, signal perception and transduction, and starch biosynthesis. Disabling HsfA2 altered the physiological state of the cells, and impacted the mechanisms induced to adapt to spaceflight, and identified HsfA2-dependent genes that are important to the adaption of wild type cells to spaceflight. Collectively these data indicate a non-thermal role for the HSF network in spaceflight adaptation. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
218. Evolutionary embryology revived in Japan with a new molecular basis--Nori Satoh and history of ascidian studies in Kyoto in the 20th century
- Author
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Kuratani S, Rie Kusakabe, Wada H, and Agata K
- Subjects
Japan ,Awards and Prizes ,Animals ,Urochordata ,History, 20th Century ,Biological Evolution ,History, 21st Century ,Developmental Biology
219. Long-term monitoring of organic pollutants in water - Application of passive dosimetry
- Author
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Zabiegała, B., Agata, K., and Jacek Namiesnik
220. Improved timed-mating, non-invasive method using fewer unproven female rats with pregnancy validation via early body mass increases
- Author
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Stramek, Agata K., Johnson, Michelle L., Taylor, Victoria J., Stramek, Agata K., Johnson, Michelle L., and Taylor, Victoria J.
- Abstract
For studies requiring accurate conception-timing, reliable, efficient methods of detecting oestrus reduce time and costs, whilst improving welfare. Standard methods use vaginal cytology to stage cycle, and breeders are paired–up using approximately five proven females with proven males to achieve at least one conception on a specific day. We describe an alternative, fast, consistent, non-invasive method of timed-mating using detection of lordosis behaviour in Wistar and Lister-Hooded rats that used unproven females with high success rates. Rats under reverse-lighting had body masses recorded pre-mating, day (d) 3-4, d8, d10 and d18 of pregnancy. Using only the presence of the oestrus dance to time-mate females for 24-hrs, 89% Wistar and 88% Lister-Hooded rats successfully conceived. We did not observe behavioural oestrus in Sprague-Dawleys without males present. Significant body mass increases following mating distinguished pregnant from non-pregnant rats, as early as d4 of pregnancy (10% ± 1.0 increase cf 3% ± 1.2). The pattern of increases throughout gestation was similar for all pregnant rats until late pregnancy, when there were smaller increases for primi- and multiparous rats (32% ± 2.5; 25% ± 2.4), whereas nulliparous rats had highest gains (38% ± 1.5). This method demonstrated a distinct refinement of the previous timed-mating common practice used, as disturbance of females was minimised. Only the number required of nulli-, primi- or multiparous rats were mated, and body mass increases validated pregnancy status. This new breeding-management method is now established practice for two strains of rat and resulted in a reduction in animal use.
221. Improved timed-mating, non-invasive method using fewer unproven female rats with pregnancy validation via early body mass increases
- Author
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Stramek, Agata K., Johnson, Michelle L., Taylor, Victoria J., Stramek, Agata K., Johnson, Michelle L., and Taylor, Victoria J.
- Abstract
For studies requiring accurate conception-timing, reliable, efficient methods of detecting oestrus reduce time and costs, whilst improving welfare. Standard methods use vaginal cytology to stage cycle, and breeders are paired–up using approximately five proven females with proven males to achieve at least one conception on a specific day. We describe an alternative, fast, consistent, non-invasive method of timed-mating using detection of lordosis behaviour in Wistar and Lister-Hooded rats that used unproven females with high success rates. Rats under reverse-lighting had body masses recorded pre-mating, day (d) 3-4, d8, d10 and d18 of pregnancy. Using only the presence of the oestrus dance to time-mate females for 24-hrs, 89% Wistar and 88% Lister-Hooded rats successfully conceived. We did not observe behavioural oestrus in Sprague-Dawleys without males present. Significant body mass increases following mating distinguished pregnant from non-pregnant rats, as early as d4 of pregnancy (10% ± 1.0 increase cf 3% ± 1.2). The pattern of increases throughout gestation was similar for all pregnant rats until late pregnancy, when there were smaller increases for primi- and multiparous rats (32% ± 2.5; 25% ± 2.4), whereas nulliparous rats had highest gains (38% ± 1.5). This method demonstrated a distinct refinement of the previous timed-mating common practice used, as disturbance of females was minimised. Only the number required of nulli-, primi- or multiparous rats were mated, and body mass increases validated pregnancy status. This new breeding-management method is now established practice for two strains of rat and resulted in a reduction in animal use.
222. ChemInform Abstract: AQUATION OF FIRST ROW TRANSITION METAL PERCHLORATES IN ACETIC ACID
- Author
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SAWADA, K., primary, AGATA, K., additional, and TANAKA, M., additional
- Published
- 1978
- Full Text
- View/download PDF
223. Organ-specific remodeling of the Arabidopsis transcriptome in response to spaceflight
- Author
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Eric R. Schultz, Anna-Lisa Paul, Agata K. Zupanska, and Robert J. Ferl
- Subjects
Regulation of gene expression ,biology ,Arabidopsis Proteins ,Ecology ,Arabidopsis ,Plant Science ,Space Flight ,Root hair ,biology.organism_classification ,Spaceflight ,law.invention ,Cell biology ,Transcriptome ,Species Specificity ,Gene Expression Regulation, Plant ,law ,Arabidopsis thaliana ,Gene ,Transcription factor ,Ecosystem ,Research Article - Abstract
Background Spaceflight presents a novel environment that is outside the evolutionary experience of terrestrial organisms. Full activation of the International Space Station as a science platform complete with sophisticated plant growth chambers, laboratory benches, and procedures for effective sample return, has enabled a new level of research capability and hypothesis testing in this unique environment. The opportunity to examine the strategies of environmental sensing in spaceflight, which includes the absence of unit gravity, provides a unique insight into the balance of influence among abiotic cues directing plant growth and development: including gravity, light, and touch. The data presented here correlate morphological and transcriptome data from replicated spaceflight experiments. Results The transcriptome of Arabidopsis thaliana demonstrated organ-specific changes in response to spaceflight, with 480 genes showing significant changes in expression in spaceflight plants compared with ground controls by at least 1.9-fold, and 58 by more than 7-fold. Leaves, hypocotyls, and roots each displayed unique patterns of response, yet many gene functions within the responses are related. Particularly represented across the dataset were genes associated with cell architecture and growth hormone signaling; processes that would not be anticipated to be altered in microgravity yet may correlate with morphological changes observed in spaceflight plants. As examples, differential expression of genes involved with touch, cell wall remodeling, root hairs, and cell expansion may correlate with spaceflight-associated root skewing, while differential expression of auxin-related and other gravity-signaling genes seemingly correlates with the microgravity of spaceflight. Although functionally related genes were differentially represented in leaves, hypocotyls, and roots, the expression of individual genes varied substantially across organ types, indicating that there is no single response to spaceflight. Rather, each organ employed its own response tactics within a shared strategy, largely involving cell wall architecture. Conclusions Spaceflight appears to initiate cellular remodeling throughout the plant, yet specific strategies of the response are distinct among specific organs of the plant. Further, these data illustrate that in the absence of gravity plants rely on other environmental cues to initiate the morphological responses essential to successful growth and development, and that the basis for that engagement lies in the differential expression of genes in an organ-specific manner that maximizes the utilization of these signals – such as the up-regulation of genes associated with light-sensing in roots.
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- View/download PDF
224. Comprehensive Analysis of Gene Expression Profiles of the Beet Armyworm Spodoptera exigua Larvae Challenged with Bacillus thuringiensis Vip3Aa Toxin.
- Author
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Bel, Yolanda, Jakubowska, Agata K., Costa, Juliana, Herrero, Salvador, and Escriche, Baltasar
- Subjects
- *
BEET armyworm , *GENE expression , *INSECT genetics , *INSECT larvae , *BACILLUS thuringiensis , *BACTERIAL toxins , *HOST-parasite relationships , *PROTEIN microarrays - Abstract
Host-pathogen interactions result in complex relationship, many aspects of which are not completely understood. Vip proteins, which are Bacillus thuringensis (Bt) insecticidal toxins produced during the vegetative stage, are selectively effective against specific insect pests. This new group of Bt proteins represents an interesting alternative to the classical Bt Cry toxins because current data suggests that they do not share the same mode of action. We have designed and developed a genome-wide microarray for the beet armyworm Spodoptera exigua, a serious lepidopteran pest of many agricultural crops, and used it to better understand how lepidopteran larvae respond to the treatment with the insecticidal protein Vip3Aa. With this approach, the goal of our study was to evaluate the changes in gene expression levels caused by treatment with sublethal doses of Vip3Aa (causing 99% growth inhibition) at 8 and 24 h after feeding. Results indicated that the toxin provoked a wide transcriptional response, with 19% of the microarray unigenes responding significantly to treatment. The number of up- and down-regulated unigenes was very similar. The number of genes whose expression was regulated at 8 h was similar to the number of genes whose expression was regulated after 24 h of treatment. The up-regulated sequences were enriched for genes involved in innate immune response and in pathogen response such as antimicrobial peptides (AMPs) and repat genes. The down-regulated sequences were mainly unigenes with homology to genes involved in metabolism. Genes related to the mode of action of Bt Cry proteins were found, in general, to be slightly overexpressed. The present study is the first genome-wide analysis of the response of lepidopteran insects to Vip3Aa intoxication. An insight into the molecular mechanisms and components related to Vip intoxication will allow designing of more effective management strategies for pest control. [ABSTRACT FROM AUTHOR]
- Published
- 2013
- Full Text
- View/download PDF
225. Stem cells and their niche in planarians
- Author
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Agata, K. and Teramoto, M.
- Published
- 2006
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- View/download PDF
226. Occupation Times of Continuous Markov Processes
- Author
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Korpas, Agata K.
- Subjects
- Mathematics, Markov processes, Occupation times
- Abstract
We study the long-time asymptotic growth rate of mean occupation times of certain multidimensional continuous strong Markov processes. This problem for one-dimensional diffusions has been studied by many authors, also in the context of the limiting distributions of occupation times. The existing results for linear diffusions use analytical methods. They rely on Krein's correspondence from one-dimensional theory of strings. We extend the one-dimensional results of Kasahara, Kotani and Watanabe, (1975-1982) improved by Zirbel (1997), to multidimensional diffusions which are time changed Wiener processes. The difficulties in generalizing the existing methods to higher dimensions arise from the fact that the Wiener process in higher dimensions does not revisit single points, therefore we need a new approach. The method we propose is probabilistic and it works in multiple dimensions. Our approach uses reversibility and the scaling property of the Wiener process. We find a decomposition for the mean occupation time of a reversible multidimensional diffusion in terms of a function h which reflects recurrence properties of the process and a factor depending on the function used to measure the occupation time. For time changed Wiener process having radial speed density given by a power function, we find the recurrence function h exactly. This gives us the asymptotics of mean occupation times of radially time changed d-dimensional Wiener process with speed density m(x) = c|x|δ. We prove a comparison result which allows us to determine the asymptotic behavior of the function h in some non-radial cases. The bounds on hitting times combined with the comparison result allow us to determine the mean occupation times also in some non-radial cases.
- Published
- 2006
227. Study of crystallin expression in human lens epithelial cells during differentiation in culture and in non-lenticular tissues
- Author
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Reddy, V.N., Katsura, H., Arita, T., Lin, L.-R., Eguchi, G., Agata, K., and Sawada, K.
- Published
- 1991
- Full Text
- View/download PDF
228. cDNA cloning and partial sequencing of homeobox genes in Dugesia japonica
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Miyamoto, T., Orii, H., Agata, K., and Watanabe, K.
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DNA ,MOLECULAR biology - Published
- 1995
229. Single Nucleotide Polymorphisms of Interleukins and Toll-like Receptors and Neuroimaging Results in Newborns with Congenital HCMV Infection.
- Author
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Czech-Kowalska, Justyna, Jedlińska-Pijanowska, Dominika, Pleskaczyńska, Agata K., Niezgoda, Anna, Gradowska, Kinga, Pietrzyk, Aleksandra, Jurkiewicz, Elżbieta, Jaworski, Maciej, and Kasztelewicz, Beata
- Subjects
- *
SINGLE nucleotide polymorphisms , *TOLL-like receptors , *CYTOMEGALOVIRUS diseases , *NEWBORN infants , *INTERLEUKINS ,CENTRAL nervous system infections - Abstract
Congenital cytomegalovirus infection (cCMV) is the most common intrauterine infection with central nervous system (CNS) involvement. There is limited data on the associations between Single Nucleotide Polymorphisms (SNPs) in genes involving the first-line defense mechanism and the risk of CNS damage during cCMV. We investigated the associations between neuroimaging findings and SNPs in genes encoding the following cytokines and cytokine receptors in 92 infants with cCMV: interleukins (IL1B rs16944, IL12B rs3212227, IL28B rs12979860), C-C motif chemokine ligand 2 (CCL2 rs1024611), dendritic cell-specific intercellular adhesion grabbing non-integrin (DC-SIGN rs735240), Toll-like receptors (TLR2 rs5743708, TLR4 rs4986791, TLR9 rs352140). The SNP of IL1B rs16944 (G/A) was associated with a reduced risk of ventriculomegaly on MRI (OR = 0.46, 95% CI, 0.22–0.95; p = 0.03) and cUS (OR = 0.38, 95% CI, 0.0–0.93; p = 0.034). Infants carrying heterozygous (T/C) genotype at IL28B rs12979860 had an increased risk of cystic lesions on cUS (OR = 3.31, 95% CI, 1.37–8.01; p = 0.0064) and MRI (OR = 4.97, 95% CI, 1.84–13.43; p = 0.001), and an increased risk of ventriculomegaly on MRI (OR = 2.46, 95% CI, 1.03–5.90; p = 0.04). No other associations between genotyped SNPs and neuroimaging results were found. This is the first study demonstrating new associations between SNPs of IL1B and IL28B and abnormal neuroimaging in infants with cCMV. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
230. Insulinoma in pregnancy (a case presentation and systematic review of the literature).
- Author
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Dobrindt, Eva M, Mogl, Martina, Goretzki, Peter E, Pratschke, Johann, and Dukaczewska, Agata K
- Subjects
- *
INSULINOMA , *PREGNANCY , *SYMPTOMS , *BENIGN tumors , *PREGNANT women - Abstract
Insulinomas are rare, benign and functional tumors that coincidentally may become overt during pregnancy or in the post-partum period. As the general symptoms of a pregnancy might cover the clinical presentation, diagnosing remains challenging. We present one additional case of a post-partum insulinoma, combined with a systematic review of the literature to sum up relevant details in diagnosis and treatment. A systematic request of Pubmed/Medline was conducted using the following terms: "insulinoma AND pregnancy" and "insulinoma" for a second request of ClinicalTrials.gov. All publications concerning pregnant or post-partum women with insulinoma were included. Thirty-six cases could be identified for analysis. Each publication was reviewed for demographic, diagnostic and therapeutic data. The most frequent clinical signs were unconsciousness and neurological symptoms. 64.9% were diagnosed during early pregnancy and 35.1% post-partum. 91.9% underwent surgery with a third resected during pregnancy without severe influence on fetal or maternal outcome. Three patients died of metastatic disease or misdiagnosing, two of them miscarried. Insulinoma in pregnancy is rare but should be considered in case of unclear hyperinsulinemic hypoglycemia. Surgery can be performed during the second trimester or post-partum with promising outcome. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
231. Recurrent Domestication by Lepidoptera of Genes from Their Parasites Mediated by Bracoviruses.
- Author
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Gasmi, Laila, Boulain, Helene, Gauthier, Jeremy, Hua-Van, Aurelie, Musset, Karine, Jakubowska, Agata K., Aury, Jean-Marc, Volkoff, Anne-Nathalie, Huguet, Elisabeth, Herrero, Salvador, and Drezen, Jean-Michel
- Subjects
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GENETIC research , *VIRAL genetics , *LEPIDOPTERA , *NUCLEOTIDE sequencing , *PHYLOGENY , *HORIZONTAL gene transfer - Abstract
Bracoviruses are symbiotic viruses associated with tens of thousands of species of parasitic wasps that develop within the body of lepidopteran hosts and that collectively parasitize caterpillars of virtually every lepidopteran species. Viral particles are produced in the wasp ovaries and injected into host larvae with the wasp eggs. Once in the host body, the viral DNA circles enclosed in the particles integrate into lepidopteran host cell DNA. Here we show that bracovirus DNA sequences have been inserted repeatedly into lepidopteran genomes, indicating this viral DNA can also enter germline cells. The original mode of Horizontal Gene Transfer (HGT) unveiled here is based on the integrative properties of an endogenous virus that has evolved as a gene transfer agent within parasitic wasp genomes for ≈100 million years. Among the bracovirus genes thus transferred, a phylogenetic analysis indicated that those encoding C-type-lectins most likely originated from the wasp gene set, showing that a bracovirus-mediated gene flux exists between the 2 insect orders Hymenoptera and Lepidoptera. Furthermore, the acquisition of bracovirus sequences that can be expressed by Lepidoptera has resulted in the domestication of several genes that could result in adaptive advantages for the host. Indeed, functional analyses suggest that two of the acquired genes could have a protective role against a common pathogen in the field, baculovirus. From these results, we hypothesize that bracovirus-mediated HGT has played an important role in the evolutionary arms race between Lepidoptera and their pathogens. [ABSTRACT FROM AUTHOR]
- Published
- 2015
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232. Pharmacological activation of myosin II paralogs to correct cell mechanics defects.
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Surcel, Alexandra, Win Pin Ng, West-Foyle, Hoku, Qingfeng Zhu, Ren, Yixin, Avery, Lindsay B., Krenc, Agata K., Meyers, David J., Rock, Ronald S., Anders, Robert A., Freel Meyers, Caren L., and Robinson, Douglas N.
- Subjects
- *
CELLULAR signal transduction , *CELLULAR mechanics , *MYOSIN , *HYDROXYACETOPHENONES , *PHOSPHORYLATION , *CANCER cells , *EPITHELIAL cells - Abstract
Current approaches to cancer treatment focus on targeting signal transduction pathways. Here, we develop an alternative system for targeting cell mechanics for the discovery of novel therapeutics. We designed a live-cell, high-throughput chemical screen to identify mechanical modulators. We characterized 4-hydroxyacetophenone (4-HAP), which enhances the cortical localization of the mechanoenzyme myosin II, independent of myosin heavy-chain phosphorylation, thus increasing cellular cortical tension. To shift cell mechanics, 4-HAP requires myosin II, including its full power stroke, specifically activating human myosin IIB (MYH10) and human myosin IIC (MYH14), but not human myosin IIA (MYH9). We further demonstrated that invasive pancreatic cancer cells are more deformable than normal pancreatic ductal epithelial cells, a mechanical profile that was partially corrected with 4-HAP, which also decreased the invasion and migration of these cancer cells. Overall, 4-HAP modifies nonmuscle myosin II-based cell mechanics across phylogeny and disease states and provides proof of concept that cell mechanics offer a rich drug target space, allowing for possible corrective modulation of tumor cell behavior. [ABSTRACT FROM AUTHOR]
- Published
- 2015
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233. Conditioning- and reward-related dendritic and presynaptic plasticity of nucleus accumbens neurons in male and female sign-tracker rats.
- Author
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Colom M, Kraev I, Stramek AK, Loza IB, Rostron CL, Heath CJ, Dommett EJ, and Singer BF
- Subjects
- Animals, Male, Female, Rats, Cues, Neurons physiology, Synaptophysin metabolism, Rats, Sprague-Dawley, Presynaptic Terminals physiology, Nucleus Accumbens physiology, Nucleus Accumbens cytology, Reward, Neuronal Plasticity physiology, Dendritic Spines physiology, Conditioning, Classical physiology
- Abstract
For a subset of individuals known as sign-trackers, discrete Pavlovian cues associated with rewarding stimuli can acquire incentive properties and exert control over behaviour. Because responsiveness to cues is a feature of various neuropsychiatric conditions, rodent models of sign-tracking may prove useful for exploring the neurobiology of individual variation in psychiatric vulnerabilities. Converging evidence points towards the involvement of dopaminergic neurotransmission in the nucleus accumbens core (NAc) in the development of sign-tracking, yet whether this phenotype is associated with specific accumbal postsynaptic properties is unknown. Here, we examined dendritic spine structural organisation, as well as presynaptic and postsynaptic markers of activity, in the NAc core of male and female rats following a Pavlovian-conditioned approach procedure. In contrast to our prediction that cue re-exposure would increase spine density, experiencing the discrete lever-cue without reward delivery resulted in lower spine density than control rats for which the lever was unpaired with reward during training; this effect was tempered in the most robust sign-trackers. Interestingly, this same behavioural test (lever presentation without reward) resulted in increased levels of a marker of presynaptic activity (synaptophysin), and this effect was greatest in female rats. Whilst some behavioural differences were observed in females during initial Pavlovian training, final conditioning scores did not differ from males and were unaffected by the oestrous cycle. This work provides novel insights into how conditioning impacts the neuronal plasticity of the NAc core, whilst highlighting the importance of studying the behaviour and neurobiology of both male and female rats., (© 2024 The Author(s). European Journal of Neuroscience published by Federation of European Neuroscience Societies and John Wiley & Sons Ltd.)
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- 2024
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234. Electronic Band Structure and Optical Properties of HgPS 3 Crystal and Layers.
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de Simoni B, Rybak M, Antonatos N, Herman AP, Ciesiołkiewicz K, Tołłoczko AK, Peter M, Piejko A, Mosina K, Sofer Z, and Kudrawiec R
- Abstract
Transition metal thiophosphates (MPS
3 ) are of great interest due to their layered structure and magnetic properties. Although HgPS3 may not exhibit magnetic properties, its uniqueness lies in its triclinic crystal structure and in the substantial mass of mercury, rendering it a compelling subject for exploration in terms of fundamental properties. In this work, we present comprehensive experimental and theoretical studies of the electronic band structure and optical properties for the HgPS3 crystal and mechanically exfoliated layers from a solid crystal. Based on absorption, reflectance and photoluminescence measurements supported by theoretical calculations, it is shown that the HgPS3 crystal has an indirect gap of 2.68 eV at room temperature. The direct gap is identified at the Γ point of the Brillouin zone (BZ) ≈ 50 meV above the indirect gap. The optical transition at the Γ point is forbidden due to selection rules, but the oscillator strength near the Γ point increases rapidly and therefore the direct optical transitions are visible in the reflectance spectra approximately at 60-120 meV above the absorption edge, across the temperature range of 40 to 300 K. The indirect nature of the bandgap and the selection rules for Γ point contribute to the absence of near-bandgap emission in HgPS3 . Consequently, the photoluminescence spectrum is primarily governed by defect-related emission. The electronic band structure of HgPS3 undergoes significant changes when the crystal thickness is reduced to tri- and bilayers, resulting in a direct bandgap. Interestingly, in the monolayer regime, the fundamental transition is again indirect. The layered structure of the HgPS3 crystal was confirmed by scanning electron microscopy (SEM) and by mechanical exfoliation., Competing Interests: The authors declare no competing financial interest., (© 2024 The Authors. Published by American Chemical Society.)- Published
- 2024
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235. Physical activity of children and adolescents with disabilities in Poland - First Para Report Card.
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Kazimierz UP, Paweł Z, Kwok N, and Agata K
- Abstract
Background: This study provides a comprehensive evaluation of the Polish Para Report Card, which assesses various aspects of physical activity (PA) and related indicators among Polish children and adolescents with disabilities. This area has been under-researched, especially in the Polish context., Methods: The research methodology included systematic literature searches from 2014 to 2022, utilizing databases such as PubMed, EBSCO, and Google Scholar. This was complemented by outreach to governmental institutions for additional reports and data. The search strategy was aligned with the Global Matrix methodology and aimed at evaluating ten distinct indicators: Overall PA, Organized Sport and PA, Active Play, Active Transportation, Sedentary Behavior, Family and Peers, School, Community and Environment, Government., Results: Grades were assigned to three of ten indicators. The Overall PA, Sedentary Behavior, and Government indicators each received a D-grade., Conclusions: The study reveals the need for an extensive system to monitor PA among Polish children and adolescents with disabilities, and the development of effective strategies to enhance PA in this group. Children with disabilities in Poland are under-researched in the area of PA compared to their their counterparts without disabilities., Competing Interests: The authors declare that they have no competing interests., (© 2023 The Society of Chinese Scholars on Exercise Physiology and Fitness. Published by Elsevier (Singapore) Pte Ltd.)
- Published
- 2024
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236. FGF-stimulated tendon cells embrace a chondrogenic fate with BMP7 in newt tissue culture.
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Sugiura N and Agata K
- Subjects
- Animals, Cell Differentiation, Salamandridae metabolism, Tendons metabolism, Chondrocytes metabolism, Fibroblast Growth Factors pharmacology, Fibroblast Growth Factors metabolism, Bone Morphogenetic Protein 7 metabolism, Bone Morphogenetic Protein 7 pharmacology
- Abstract
Newts can regenerate functional elbow joints after amputation at the joint level. Previous studies have suggested the potential contribution of cells from residual tendon tissues to joint cartilage regeneration. A serum-free tissue culture system for tendons was established to explore cell dynamics during joint regeneration. Culturing isolated tendons in this system, stimulated by regeneration-related factors, such as fibroblast growth factor (FGF) and platelet-derived growth factor, led to robust cell migration and proliferation. Moreover, cells proliferating in an FGF-rich environment differentiated into Sox9-positive chondrocytes upon BMP7 introduction. These findings suggest that FGF-stimulated cells from tendons may aid in joint cartilage regeneration during functional elbow joint regeneration in newts., (© 2024 The Authors. Development, Growth & Differentiation published by John Wiley & Sons Australia, Ltd on behalf of Japanese Society of Developmental Biologists.)
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- 2024
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237. Fgf10 mutant newts regenerate normal hindlimbs despite severe developmental defects.
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Suzuki M, Okumura A, Chihara A, Shibata Y, Endo T, Teramoto M, Agata K, Bronner ME, and Suzuki KT
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- Animals, Hindlimb growth & development, Regeneration, Pleurodeles genetics, Pleurodeles growth & development, Pleurodeles metabolism, Fibroblast Growth Factor 10 genetics, Fibroblast Growth Factor 10 metabolism
- Abstract
In amniote limbs, Fibroblast Growth Factor 10 (FGF10) is essential for limb development, but whether this function is broadly conserved in tetrapods and/or involved in adult limb regeneration remains unknown. To tackle this question, we established Fgf10 mutant lines in the newt Pleurodeles waltl which has amazing regenerative ability. While Fgf10 mutant forelimbs develop normally, the hindlimbs fail to develop and downregulate FGF target genes. Despite these developmental defects, Fgf10 mutants were able to regenerate normal hindlimbs rather than recapitulating the embryonic phenotype. Together, our results demonstrate an important role for FGF10 in hindlimb formation, but little or no function in regeneration, suggesting that different mechanisms operate during limb regeneration versus development., Competing Interests: Competing interests statement:The authors declare no competing interest.
- Published
- 2024
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238. Establishment of a new method to isolate viable x-ray-sensitive cells from planarian by fluorescence-activated cell sorting.
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Ishida M, Kuroki Y, and Agata K
- Subjects
- Animals, Flow Cytometry methods, X-Rays, Fluorescent Dyes pharmacology, Mammals, Planarians
- Abstract
Planarians show outstanding regenerative ability due to the proliferation of neoblasts. Hence the method to isolate planarian neoblasts is important to understand the regeneration process. In our previous study, we reported a method to isolate planarian neoblasts of Dugesia japonica using fluorescence-activated cell sorting (FACS). However, we have not yet succeeded in cultivating these cells even under in vivo conditions after transplantation into x-ray-irradiated planarians. This suggests that dissociated cells might enter apoptotic or necrotic states in the process of fluorescent dye staining and sorting. Here, we developed a new method to isolate viable neoblasts, which can proliferate in the x-ray-irradiated planarians. First, the toxicity of various fluorescence dyes was investigated. All nuclear fluorescent dyes such as Hoechst 33342, DRAQ5, and DyeCycle, showed, more or less, toxicity to mammalian culture cells. In contrast, cytoplasmic fluorescent dye for live cells, calcein AM, was less toxic on these cells. Next, we stained the dissociated planarian cells with only calcein AM, and then collected the x-ray-sensitive fraction. Although the purity of neoblasts was slightly lower than that of the original staining method (ca. 97% → ca. 89%), the sorted cells could actively proliferate when they were injected into x-ray-irradiated planarians. This simple staining and sorting method will provide new opportunities to isolate viable neoblasts and understand regenerating processes., (© 2023 The Authors. Development, Growth & Differentiation published by John Wiley & Sons Australia, Ltd on behalf of Japanese Society of Developmental Biologists.)
- Published
- 2023
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239. Isolation of planarian viable cells using fluorescence-activated cell sorting for advancing single-cell transcriptome analysis.
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Kuroki Y and Agata K
- Subjects
- Animals, Flow Cytometry methods, Single-Cell Gene Expression Analysis, RNA, Messenger, Planarians genetics, Pluripotent Stem Cells
- Abstract
Preparing viable single cells is critical for conducting single-cell RNA sequencing (scRNA-seq) because the presence of ambient RNA from dead or damaged cells can interfere with data analysis. Here, we developed a method for isolating viable single cells from adult planarian bodies using fluorescence-activated cell sorting (FACS). This method was then applied to both adult pluripotent stem cells (aPSCs) and differentiating/differentiated cells. Initially, we employed a violet instead of ultraviolet (UV) laser to excite Hoechst 33342 to reduce cellular damage. After optimization of cell staining conditions and FACS compensation, we generated FACS profiles similar to those created using a previous method that employed a UV laser. Despite successfully obtaining high-quality RNA sequencing data for aPSCs, non-aPSCs produced low-quality RNA reads (i.e., <60% of cells possessing barcoding mRNAs). Subsequently, we identified an effective FACS gating condition that excluded low-quality cells and tissue debris without staining. This non-staining isolation strategy not only reduced post-dissociation time but also enabled high-quality scRNA-seq results for all cell types (i.e., >80%). Taken together, these findings imply that the non-staining FACS strategy may be beneficial for isolating viable cells not only from planarians but also from other organisms and tissues for scRNA-seq studies., (© 2023 The Authors. Genes to Cells published by Molecular Biology Society of Japan and John Wiley & Sons Australia, Ltd.)
- Published
- 2023
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240. Inducing Angiogenesis in the Nucleus Pulposus.
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Damle SR, Krzyzanowska AK, Korsun MK, Morse KW, Gilbert S, Kim HJ, Boachie-Adjei O, Rawlins BA, van der Meulen MCH, Greenblatt MB, Hidaka C, and Cunningham ME
- Subjects
- Rats, Animals, Vascular Endothelial Growth Factor A metabolism, Rats, Inbred Lew, Proteoglycans metabolism, Nucleus Pulposus metabolism, Intervertebral Disc pathology
- Abstract
Bone morphogenetic protein (BMP) gene delivery to Lewis rat lumbar intervertebral discs (IVDs) drives bone formation anterior and external to the IVD, suggesting the IVD is inhospitable to osteogenesis. This study was designed to determine if IVD destruction with a proteoglycanase, and/or generating an IVD blood supply by gene delivery of an angiogenic growth factor, could render the IVD permissive to intra-discal BMP-driven osteogenesis and fusion. Surgical intra-discal delivery of naïve or gene-programmed cells (BMP2/BMP7 co-expressing or VEGF
165 expressing) +/- purified chondroitinase-ABC (chABC) in all permutations was performed between lumbar 4/5 and L5/6 vertebrae, and radiographic, histology, and biomechanics endpoints were collected. Follow-up anti-sFlt Western blotting was performed. BMP and VEGF/BMP treatments had the highest stiffness, bone production and fusion. Bone was induced anterior to the IVD, and was not intra-discal from any treatment. chABC impaired BMP-driven osteogenesis, decreased histological staining for IVD proteoglycans, and made the IVD permissive to angiogenesis. A soluble fragment of VEGF Receptor-1 (sFlt) was liberated from the IVD matrix by incubation with chABC, suggesting dysregulation of the sFlt matrix attachment is a possible mechanism for the chABC-mediated IVD angiogenesis we observed. Based on these results, the IVD can be manipulated to foster vascular invasion, and by extension, possibly osteogenesis.- Published
- 2023
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241. Editorial: Revisiting the limits of plant life - plant adaptations to extreme terrestrial environments relating to astrobiology and space biology.
- Author
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Zupanska AK, Arena C, Zuñiga GE, Casanova-Katny A, Turnbull JD, Bravo LA, Ramos P, Sun H, and Shishov VV
- Abstract
Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
- Published
- 2023
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242. Predictors for pharmacological therapy and perinatal outcomes with metformin treatment in women with gestational diabetes.
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Brzozowska MM, Puvanendran A, Bliuc D, Zuschmann A, Piotrowicz AK, and O'Sullivan A
- Subjects
- Infant, Newborn, Pregnancy, Female, Humans, Hypoglycemic Agents therapeutic use, Cesarean Section, Prospective Studies, Australia epidemiology, Insulin therapeutic use, Glucose therapeutic use, Diabetes, Gestational drug therapy, Diabetes, Gestational epidemiology, Metformin therapeutic use
- Abstract
Background: The prevalence of gestational diabetes mellitus (GDM) has been increasing in Australia and worldwide. The study aims were to examine, in comparison with dietary intervention, perinatal outcomes for women with gestational diabetes who were attending a single hospital clinic and to identify predictors for their pharmacological GDM treatment., Methods: A prospective, observational study of women with GDM, treated with "Diet, N= 50", "Metformin, N = 35", "Metformin and Insulin, N = 46" or "Insulin, N = 20"., Findings: The mean BMI for the whole cohort was 25.8 ± 4.7 kg/m
2 . The Metformin group, compared to the Diet group, had OR=3.1 (95% CI:1.13 to 8.25) for caesarean section birth (LSCS) compared to normal vaginal birth mode with no longer such a significant association after controlling for the number of their elective LSCS. The insulin treated group had the highest number of small for gestational age neonates (20%, p<0.05) with neonatal hypoglycaemia (25%, p< 0.05). Fasting glucose value on oral GTT (glucose tolerance test) was the strongest predictor for a pharmacological intervention requirement with OR = 2.77 (95CI%: 1.16 to 6.61), followed by timing of OGTT with OR=0.90 (95% CI: 0.83 to 0.97) and previous pregnancy loss with OR=0.28 (95% CI:0.10 to 0.74)., Interpretation: These data suggest that metformin may be a safe alternative treatment to insulin treatment in GDM. Raised fasting glucose on oral GTT was the strongest indicator that GDM women with BMI < 35 kg/m2 may require pharmacological therapy. Further studies are needed to identify the most effective and safe management of gestational diabetes within the public hospital setting., Australian New Zealand Clinical Trial Registry Anzctr Trial Id: ACTRN12620000397910., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2023 Brzozowska, Puvanendran, Bliuc, Zuschmann, Piotrowicz and O’Sullivan.)- Published
- 2023
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243. MEK/ERK Signaling Regulates Reconstitution of the Dopaminergic Nerve Circuit in the Planarian Dugesia japonica.
- Author
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Hijioka M, Ikemoto Y, Fukao K, Inoue T, Kobayakawa T, Nishimura K, Takata K, Agata K, and Kitamura Y
- Subjects
- Animals, Dopamine physiology, Dopaminergic Neurons, Mitogen-Activated Protein Kinase Kinases, Oxidopamine toxicity, Planarians physiology
- Abstract
Planarian Dugesia japonica is a flatworm that can autonomously regenerate its own body after an artificial amputation. A recent report showed the role of the mitogen-activated protein kinase/extracellular signal-regulated kinase (MEK/ERK) pathway in the head morphogenesis during the planarian regeneration process after amputation; however, neuron-specific regeneration mechanisms have not yet been reported. Here, whether MEK/ERK pathway was involved in the dopaminergic neuronal regeneration in planarians was investigated. Planarians regenerated their body within 14 days after amputation; however, the head region morphogenesis was inhibited by MEK inhibitor U0126 (3 or 10 μM). Furthermore, the number of planarian tyrosine hydroxylase (DjTH)-positive dopaminergic neurons in the regenerated head region was also decreased by U0126. The 6-hydroxydopamine (6-OHDA), a dopaminergic neurotoxin, can decrease the number of dopaminergic neurons; however, planarians can regenerate dopaminergic neurons after injecting 6-OHDA into the intestinal tract. MEK inhibitor PD98059 (30 μM) or U0126 (10 μM) significantly decreased dopaminergic neurons 5 days after the 6-OHDA injection. During the regeneration process of dopaminergic neurons, phosphorylated histone H3 (H3P)-positive stem cells known as "neoblasts" were increased in the head region; however, MEK inhibitors significantly decreased the number of H3P-positive neoblasts. These results suggested that dopaminergic neuronal regeneration in planarian was regulated by the MEK/ERK pathway., (© 2021. The Author(s), under exclusive licence to Springer Science+Business Media, LLC part of Springer Nature.)
- Published
- 2022
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244. CRISPR/Cas9-based simple transgenesis in Xenopus laevis.
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Shibata Y, Suzuki M, Hirose N, Takayama A, Sanbo C, Inoue T, Umesono Y, Agata K, Ueno N, Suzuki KT, and Mochii M
- Subjects
- Animals, Animals, Genetically Modified, Ribonucleoproteins genetics, Transgenes, Xenopus laevis genetics, CRISPR-Cas Systems genetics, Gene Transfer Techniques
- Abstract
Transgenic techniques have greatly increased our understanding of the transcriptional regulation of target genes through live reporter imaging, as well as the spatiotemporal function of a gene using loss- and gain-of-function constructs. In Xenopus species, two well-established transgenic methods, restriction enzyme-mediated integration and I-SceI meganuclease-mediated transgenesis, have been used to generate transgenic animals. However, donor plasmids are randomly integrated into the Xenopus genome in both methods. Here, we established a new and simple targeted transgenesis technique based on CRISPR/Cas9 in Xenopus laevis. In this method, Cas9 ribonucleoprotein (RNP) targeting a putative harbor site (the transforming growth factor beta receptor 2-like (tgfbr2l) locus) and a preset donor plasmid DNA were co-injected into the one-cell stage embryos of X. laevis. Approximately 10% of faithful reporter expression was detected in F0 crispants in a promoter/enhancer-specific manner. Importantly, efficient germline transmission and stable transgene expression were observed in the F1 offspring. The simplicity of this method only required preparation of a donor vector containing the tgfbr2l genome fragment and Cas9 RNP targeting this site, which are common experimental procedures used in Xenopus laboratories. Our improved technique allows the simple generation of transgenic X. laevis, so is expected to become a powerful tool for reporter assay and gene function analysis., Competing Interests: Declaration of competing interest The authors declare that they have no competing interests., (Copyright © 2022 Elsevier Inc. All rights reserved.)
- Published
- 2022
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245. Zbtb20 identifies and controls a thymus-derived population of regulatory T cells that play a role in intestinal homeostasis.
- Author
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Krzyzanowska AK, Haynes Ii RAH, Kovalovsky D, Lin HC, Osorio L, Edelblum KL, Corcoran LM, Rabson AB, Denzin LK, and Sant'Angelo DB
- Subjects
- Animals, Homeostasis, Intestines, Mice, Mice, Knockout, Colitis chemically induced, T-Lymphocytes, Regulatory metabolism, Transcription Factors genetics
- Abstract
The expression of BTB-ZF transcription factors such as ThPOK in CD4
+ T cells, Bcl6 in T follicular helper cells, and PLZF in natural killer T cells defines the fundamental nature and characteristics of these cells. Screening for lineage-defining BTB-ZF genes led to the discovery of a subset of T cells that expressed Zbtb20. About half of Zbtb20+ T cells expressed FoxP3, the lineage-defining transcription factor for regulatory T cells (Tregs ). Zbtb20+ Tregs were phenotypically and genetically distinct from the larger conventional Treg population. Zbtb20+ Tregs constitutively expressed mRNA for interleukin-10 and produced high levels of the cytokine upon primary activation. Zbtb20+ Tregs were enriched in the intestine and specifically expanded when inflammation was induced by the use of dextran sodium sulfate. Conditional deletion of Zbtb20 in T cells resulted in a loss of intestinal epithelial barrier integrity. Consequently, knockout (KO) mice were acutely sensitive to colitis and often died because of the disease. Adoptive transfer of Zbtb20+ Tregs protected the Zbtb20 conditional KO mice from severe colitis and death, whereas non-Zbtb20 Tregs did not. Zbtb20 was detected in CD24hi double-positive and CD62Llo CD4 single-positive thymocytes, suggesting that expression of the transcription factor and the phenotype of these cells were induced during thymic development. However, Zbtb20 expression was not induced in "conventional" Tregs by activation in vitro or in vivo. Thus, Zbtb20 expression identified and controlled the function of a distinct subset of Tregs that are involved in intestinal homeostasis.- Published
- 2022
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246. An approach for elucidating dermal fibroblast dedifferentiation in amphibian limb regeneration.
- Author
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Satoh A, Kashimoto R, Ohashi A, Furukawa S, Yamamoto S, Inoue T, Hayashi T, and Agata K
- Abstract
Urodele amphibians, Pleurodeles waltl and Ambystoma mexicanum, have organ-level regeneration capability, such as limb regeneration. Multipotent cells are induced by an endogenous mechanism in amphibian limb regeneration. It is well known that dermal fibroblasts receive regenerative signals and turn into multipotent cells, called blastema cells. However, the induction mechanism of the blastema cells from matured dermal cells was unknown. We previously found that BMP2, FGF2, and FGF8 (B2FF) could play sufficient roles in blastema induction in urodele amphibians. Here, we show that B2FF treatment can induce dermis-derived cells that can participate in multiple cell lineage in limb regeneration. We first established a newt dermis-derived cell line and confirmed that B2FF treatment on the newt cells provided plasticity in cellular differentiation in limb regeneration. To clarify the factors that can provide the plasticity in differentiation, we performed the interspecies comparative analysis between newt cells and mouse cells and found the Pde4b gene was upregulated by B2FF treatment only in the newt cells. Blocking PDE4B signaling by a chemical PDE4 inhibitor suppressed dermis-to-cartilage transformation and the mosaic knockout animals showed consistent results. Our results are a valuable insight into how dermal fibroblasts acquire multipotency during the early phase of limb regeneration via an endogenous program in amphibian limb regeneration., (© 2022. The Author(s).)
- Published
- 2022
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247. Toll signalling promotes blastema cell proliferation during cricket leg regeneration via insect macrophages.
- Author
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Bando T, Okumura M, Bando Y, Hagiwara M, Hamada Y, Ishimaru Y, Mito T, Kawaguchi E, Inoue T, Agata K, Noji S, and Ohuchi H
- Subjects
- Animals, Gene Expression Regulation, Gryllidae genetics, Insect Proteins genetics, Toll-Like Receptors genetics, Gryllidae metabolism, Hindlimb physiology, Insect Proteins biosynthesis, Regeneration, Signal Transduction, Toll-Like Receptors biosynthesis
- Abstract
Hemimetabolous insects, such as the two-spotted cricket Gryllus bimaculatus, can recover lost tissues, in contrast to the limited regenerative abilities of human tissues. Following cricket leg amputation, the wound surface is covered by the wound epidermis, and plasmatocytes, which are insect macrophages, accumulate in the wound region. Here, we studied the function of Toll-related molecules identified by comparative RNA sequencing during leg regeneration. Of the 11 Toll genes in the Gryllus genome, expression of Toll2-1, Toll2-2 and Toll2-5 was upregulated during regeneration. RNA interference (RNAi) of Toll, Toll2-1, Toll2-2, Toll2-3 or Toll2-4 produced regeneration defects in more than 50% of crickets. RNAi of Toll2-2 led to a decrease in the ratio of S- and M-phase cells, reduced expression of JAK/STAT signalling genes, and reduced accumulation of plasmatocytes in the blastema. Depletion of plasmatocytes in crickets using clodronate also produced regeneration defects, as well as fewer proliferating cells in the regenerating legs. Plasmatocyte depletion also downregulated the expression of Toll and JAK/STAT signalling genes in the regenerating legs. These results suggest that Spz-Toll-related signalling in plasmatocytes promotes leg regeneration through blastema cell proliferation by regulating the Upd-JAK/STAT signalling pathway., Competing Interests: Competing interests The authors declare no competing or financial interests., (© 2021. Published by The Company of Biologists Ltd.)
- Published
- 2022
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248. A Case of Focal Segmental Glomerulosclerosis in a Young Girl with a Very Low Birth Weight.
- Author
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Kashiwagi Y, Agata K, Yamanaka G, and Kawashima H
- Abstract
In Japan, the prevalence of low birth weight (LBW) has been estimated to be approximately 10%, which is the highest among developed countries. This high prevalence might affect the occurrence of LBW-associated diseases in the adult population of Japan. LBW has been recognized as a contributing factor to post-adaptive focal segmental glomerulosclerosis (FSGS) in adulthood; however, few reports to date have evaluated the clinical and pathological characteristics of post-adaptive FSGS. A 13-year-old girl was referred to our hospital owing to mild proteinuria, which was detected at a school urinary screening. She was born at a gestational age of 23 weeks, with a very LBW of 630 g. Dipstick urinalysis revealed grade (2+) proteinuria. Her serum creatinine level was 1.02 mg/dL, and she was diagnosed as having stage 2 chronic kidney disease (CKD). Her serum uric acid level was 7 mg/dL. Furthermore, her mother and 16-year old brother had hyperuricemia. A percutaneous renal biopsy leads to a diagnosis of FSGS. After 3 years of treatment with an angiotensin receptor blocker, her proteinuria decreased. However, her serum creatinine level was 1.07 mg/dL, and she still had stage 2 CKD. We considered that in this patient, the first hit was her LBW, and the second hit was hyperuricemia. The second hit might be associated with the development of CKD. The birth history of patients is not usually confirmed by nephrologists. Our case demonstrates that obtaining information regarding the preterm birth and LBW of patients is important in the diagnosis of noncommunicable diseases because school urinary screening is not routinely performed in countries other than Japan.
- Published
- 2022
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249. Migratory regulation by MTA homologous genes is essential for the uniform distribution of planarian adult pluripotent stem cells.
- Author
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Sato Y, Shibata N, Hashimoto C, and Agata K
- Subjects
- Animals, Cell Differentiation genetics, Adult Stem Cells, Planarians, Pluripotent Stem Cells
- Abstract
The migration of adult stem cells in vivo is an important issue, but the complex tissue structures involved, and limited accessibility of the cells hinder a detailed investigation. To overcome these problems, the freshwater planarian Dugesia japonica was used because it has a simple body plan and abundant adult pluripotent stem cells (neoblasts) distributed uniformly throughout its body. To investigate the migratory mechanisms of neoblasts, two planarian homologous genes of metastatic tumor antigen (MTA-A and MTA-B), a protein involved in cancer metastasis that functions through histone deacetylation, were identified, and their function was analyzed using RNA interference (RNAi). MTA-A or MTA-B knockdown disrupted homeostatic tissue turnover and regeneration in planarians. Whereas neoblasts in MTA-A (RNAi) and MTA-B (RNAi) animals were maintained, neoblast differentiation was inhibited. Furthermore, the normal uniform neoblast distribution pattern changed to a branch-like pattern in MTA-A (RNAi) and MTA-B (RNAi) animals. To examine the neoblast migratory ability, a partial X-ray irradiation assay was performed in D. japonica. Using this assay system, the MTA-A knockdown neoblasts migrated collectively in a branch-like pattern, and the MTA-B knockdown neoblasts were not able to migrate. These results indicated that MTA-A was required for the exit of neoblasts from the branch-like region, and that MTA-B was required for neoblast migration. Thus, the migration mediated by MTA-A and MTA-B enabled uniform neoblast distribution and was required for neoblast differentiation to achieve tissue homeostasis and regeneration., (© 2022 Japanese Society of Developmental Biologists.)
- Published
- 2022
- Full Text
- View/download PDF
250. Newt Hoxa13 has an essential and predominant role in digit formation during development and regeneration.
- Author
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Takeuchi T, Matsubara H, Minamitani F, Satoh Y, Tozawa S, Moriyama T, Maruyama K, Suzuki KT, Shigenobu S, Inoue T, Tamura K, Agata K, and Hayashi T
- Subjects
- Animals, Extremities, Limb Buds metabolism, Mice, Salamandridae genetics, Salamandridae metabolism, Transcription Factors genetics, Transcription Factors metabolism, Gene Expression Regulation, Developmental, Homeodomain Proteins genetics, Homeodomain Proteins metabolism
- Abstract
The 5'Hox genes play crucial roles in limb development and specify regions in the proximal-distal axis of limbs. However, there is no direct genetic evidence that Hox genes are essential for limb development in non-mammalian tetrapods or for limb regeneration. Here, we produced single to quadruple Hox13 paralog mutants using the CRISPR/Cas9 system in newts (Pleurodeles waltl), which have strong regenerative capacities, and also produced germline mutants. We show that Hox13 genes are essential for digit formation in development, as in mice. In addition, Hoxa13 has a predominant role in digit formation, unlike in mice. The predominance is probably due to the restricted expression pattern of Hoxd13 in limb buds and the strong dependence of Hoxd13 expression on Hoxa13. Finally, we demonstrate that Hox13 genes are also necessary for digit formation in limb regeneration. Our findings reveal that the general function of Hox13 genes is conserved between limb development and regeneration, and across taxa. The predominance of Hoxa13 function both in newt limbs and fish fins, but not in mouse limbs, suggests a potential contribution of Hoxa13 function in fin-to-limb transition., Competing Interests: Competing interests The authors declare no competing or financial interests., (© 2022. Published by The Company of Biologists Ltd.)
- Published
- 2022
- Full Text
- View/download PDF
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