196 results on '"Wilson, Nerida G."'
Search Results
152. IsCadlinella ornatissimaa chromodorid? Sperm ultrastructure in an enigmatic nudibranch (Opisthobranchia, Mollusca)
- Author
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WILSON, NERIDA G., primary and HEALY, JOHN M., additional
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- 2002
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153. New deep-sea species of Xenoturbellaand the position of Xenacoelomorpha
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Rouse, Greg W., Wilson, Nerida G., Carvajal, Jose I., and Vrijenhoek, Robert C.
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Description of four new species of Xenoturbellaand phylogenomic analyses, aligning Xenacoelomorpha as sister group to the rest of Bilateria, or as sister to Protostomia.
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- 2016
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154. Shagenes A and B, New Tricyclic Sesquiterpenes Producedby an Undescribed Antarctic Octocoral.
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von Salm, Jacqueline L., Wilson, Nerida G., Vesely, Brian A., Kyle, Dennis E., Cuce, Jason, and Baker, Bill J.
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CYCLIC compounds , *SESQUITERPENES , *OCTOCORALLIA , *CELL-mediated cytotoxicity , *MASS spectrometry - Abstract
The isolation and characterizationof two new tricyclic sesquiterpenoids,shagenes A (1) and B (2) are presented.These compounds were isolated from an undescribed soft coral collectedfrom the Scotia Arc in the Southern Ocean. One- and two-dimensionalNMR spectroscopy and mass spectrometry provided the data necessaryto characterize the compounds and their relative stereochemical configurations.Exploration of the bioactivity of shagenes A and B found 1active against the visceral leishmaniasis causing parasite, Leishmania donovani, with no cytotoxicity against the mammalianhost. [ABSTRACT FROM AUTHOR]
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- 2014
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155. 3D microanatomy of a gastropod ‘worm’, Rhodope rousei n. sp. (Heterobranchia) from southern Australia.
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Brenzinger, Bastian, Wilson, Nerida G., and Schrödl, Michael
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TAXONOMISTS , *ANIMAL classification , *RHODOPE (Mollusks) , *HABITATS , *ANIMAL morphology , *INTERSEXUALITY in animals - Abstract
The turbellarian-like, radula-lacking Rhodope has been a mystery to taxonomists for over 160 years and was considered a specialized off-shoot of either opisthobranch or pulmonate Euthyneura. Occasionally reported from intertidal waters and sand habitats from all continents, most species of these minute slugs are poorly known and characterized mainly by differences in pigmentation. To understand the evolution of heterobranch microslugs, we established a morphological dataset for Rhodope by describing a new species found in the temperate waters of southern Australia. To set a standard for rhodopids, all major organ systems of R. rousei n. sp. are reconstructed three-dimensionally from series of semithin sections using the software Amira. Microanatomy confirms the loss of many general gastropod features such as foot, cephalic tentacles, shell, radula, mantle cavity, gill and heart. Excretory and digestive systems are heavily modified, with free rhogocytes in the presumed position of the heart, and a secondary buccal bulb replacing the function of the vestigial pharynx. Structural details of the monaulic but hermaphroditic genital system suggest cutaneous fertilization via spermatophores formed in specialized glands. The highly concentrated central nervous system is compared to those of other species of the genus and targets of all detectable nerves are summarized. These characters are compared with adaptations shown by other interstitial gastropods. [ABSTRACT FROM AUTHOR]
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- 2011
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156. Bioluminescent signals spatially amplified by wavelength-specific diffusion through the shell of a marine snail.
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Deheyn, Dimitri D. and Wilson, Nerida G.
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SNAILS ,BIOLUMINESCENCE ,WAVELENGTHS ,COMPETITION (Biology) ,OPTICAL communications ,PHOTONICS - Abstract
Some living organisms produce visible light (bioluminescence) for intra- or interspecific visual communication. Here, we describe a remarkable bioluminescent adaptation in the marine snail Hinea brasiliana. This species produces a luminous display in response to mechanical stimulation caused by encounters with other motile organisms. The light is produced from discrete areas on the snail's body beneath the snail's shell, and must thus overcome this structural barrier to be viewed by an external receiver. The diffusion and transmission efficiency of the shell is greater than a commercial diffuser reference material. Most strikingly, the shell, although opaque and pigmented, selectively diffuses the blue-green wavelength of the species bioluminescence. This diffusion generates a luminous display that is enlarged relative to the original light source. This unusual shell thus allows spatially amplified outward transmission of light communication signals from the snail, while allowing the animal to remain safely inside its hard protective shell. [ABSTRACT FROM AUTHOR]
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- 2011
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157. Briarella doliaris spec. nov., a new philoblennid copepod parasite from Australia: a potential link to the Splanchnotrophidae.
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Salmen, Andrea, Anton, Roland, Wilson, Nerida G., and Schrödl, Michael
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The article presents a study which examined the possibility that the species Briarella doliaris and the Splanchnotrophidae share a common ancestor which switched to an endoparasitic lifestyle. It describes the morphological similarities between the two, such as two strong claws on the distal margin of the antenna, a long blade of the mandible and the maxilla displaying a subapical element on the allobasis. Biological and taxonomical analyses revealed that both species' mouthparts are nearly identical and that they only differ with regard to the number and position of setae.
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- 2010
158. Ocean barriers and glaciation: evidence for explosive radiation of mitochondrial lineages in the Antarctic sea slug Doris kerguelenensis (Mollusca, Nudibranchia).
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WILSON, NERIDA G., SCHRÖDL, M., and HALANYCH, KENNETH M.
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DORIS , *NUDIBRANCHIA , *MITOCHONDRIAL DNA , *SPECIES distribution , *BIOLOGICAL divergence , *VICARIANCE , *POPULATION dynamics - Abstract
Strong currents and deep passages of water can be barriers for larval dispersal of continental marine animals, but potential effects on direct developers are under-investigated. We examined the genetic structure of Doris kerguelenensis, a directly developing sea slug that occurs across the Drake Passage, the body of water separating Antarctica from South America. We found deep mitochondrial divergences within populations on both sides of the Drake Passage, and South American animals formed multiple sister-group relationships with Antarctic animals. A generalised molecular clock suggested these trans-Drake pairs diverged during the Pliocene–Pleistocene, after the formation of the Drake Passage. Statistical parsimony methods recovered 29 separate haplotype networks (many sympatric) that likely correlate with allopatric events caused by repeated glacial cycles. Data from 16S were congruent but more conserved than COI, and the estimated ancestral 16S haplotype was widespread. The marked difference in the substitution rates between these two mitochondrial genes results in different estimates of connectivity. Demographic analyses on networks revealed some evidence for selection and expanding populations. Contrasting with the Northern Hemisphere, glaciation in Antarctica appears to have increased rather than reduced genetic diversity. This suggests orbitally forced range dynamics based on Northern Hemisphere phylogeography do not hold for Antarctica. The diverse lineages found in D. kerguelenensis point towards a recent, explosive radiation, likely reflecting multiple refuges during glaciation events, combined with limited subsequent dispersal. Whether recognised as cryptic species or not, genetic diversity in Antarctic marine invertebrates appears higher than expected from morphological analyses, and supports the Antarctic biodiversity pump phenomenon. [ABSTRACT FROM AUTHOR]
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- 2009
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159. The Florida amphioxus (Cephalochordata) hosts larvae of the tapeworm Acanthobothrium brevissime: natural history, anatomy and taxonomic identification of the parasite.
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Holland, Nicholas D., Campbell, Terry G., Garey, James R., Holland, Linda Z., and Wilson, Nerida G.
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TAPEWORMS ,LARVAE ,CEPHALOCHORDATA ,PARASITES ,AMPHIOXUS ,ACANTHOBOTHRIUM ,PHYSIOLOGY - Abstract
Plerocercoid larvae of a tapeworm are frequently found in the hindgut lumen of the Florida amphioxus ( Branchiostoma floridae) in central west Florida. About three-quarters of the adult amphioxus are parasitized. On average, each adult amphioxus hosts about five tapeworm larvae. The residence time of the parasites in the amphioxus gut appears to be in the order of several months, which is considerably shorter than the potential lifetime of the host. The living larvae range in length (when fully extended) from 300 to 850 µm and are approximately cone-shaped, tapering to a point posteriorly and bearing a single large sucker anteriorly. Toward the anterior end of the body are four hookless bothridia, each indented by three loculi plus an inconspicuous accessory sucker. The larvae initiate the early stages of hook formation when they are cultured for a few days in urea-saline (mimicking the gut fluid of the definitive host, which is an elasmobranch). The tapeworm larvae are identifiable to genus and species on the basis of correspondences between their nuclear ribosomal DNA genes and those of adult specimens of Acanthobothrium brevissime recovered from the spiral valve of a stingray from the same environment. [ABSTRACT FROM AUTHOR]
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- 2009
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160. Polyphyly across oceans: a molecular phylogeny of the Chromodorididae (Mollusca, Nudibranchia).
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Turner, Lucy M. and Wilson, Nerida G.
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PHYLOGENY , *OCEAN , *CHROMODORIDIDAE , *NUDIBRANCHIA , *MITOCHONDRIA , *SPECIES - Abstract
The Chromodorididae is a large and colourful family of nudibranch sea slugs distributed across the world's oceans. Most diversity is centred in the Indo-Pacific, but several genera are present in multiple ocean basins, or across regions separated by biogeographical barriers. The monophyly of these widespread genera had not been tested previously. We used 18S rDNA, 16S rDNA and COI sequence data to generate a molecular phylogeny for this group. We recovered evidence of paraphyly or polyphyly in all of the widespread genera examined ( Hypselodoris, Mexichromis, Chromodoris and Glossodoris). East Atlantic Hypselodoris and west Atlantic + east Pacific Mexichromis species were more closely related to each other than they were to their Indo-Pacific congeners. The addition of Southern Ocean species of Digidentis demonstrated an interesting alternative to this relationship, becoming the sister group for the east Atlantic Hypselodoris on the basis of 16S and 18S data, but not COI data. Sister group relationships were recovered for most monotypic or enigmatic genera. Ardeadoris is linked to Glossodoris, as is Diversidoris; Pectenodoris is sister to the Indo-Pacific Mexichromis clade, and Verconia is the sister to Noumea haliclona. Controversy surrounding the placement of the three most basal genera was only partially resolved. Using Actinocyclus to root the mitochondrial trees, Cadlinella was the unsupported sister to the Chromodorididae (excluding Cadlina), and Tyrinna occupied a relatively basal position, although this also did not receive significant statistical support. Adding nuclear 18S data gave support for Cadlina as the sister group to the rest of the Chromodorididae s.s. Otherwise, like previous molecular studies, mitochondrial genes supported an alternative position for Cadlina (with other dorid genera). [ABSTRACT FROM AUTHOR]
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- 2008
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161. Emerging biological archives can reveal ecological and climatic change in Antarctica.
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Strugnell, Jan M., McGregor, Helen V., Wilson, Nerida G., Meredith, Karina T., Chown, Steven L., Lau, Sally C. Y., Robinson, Sharon A., and Saunders, Krystyna M.
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CLIMATE change , *EFFECT of human beings on climate change , *COLONIES (Biology) , *QUATERNARY Period , *SEAWATER salinity , *PEAT bogs - Abstract
Anthropogenic climate change is causing observable changes in Antarctica and the Southern Ocean including increased air and ocean temperatures, glacial melt leading to sea‐level rise and a reduction in salinity, and changes to freshwater water availability on land. These changes impact local Antarctic ecosystems and the Earth's climate system. The Antarctic has experienced significant past environmental change, including cycles of glaciation over the Quaternary Period (the past ~2.6 million years). Understanding Antarctica's paleoecosystems, and the corresponding paleoenvironments and climates that have shaped them, provides insight into present day ecosystem change, and importantly, helps constrain model projections of future change. Biological archives such as extant moss beds and peat profiles, biological proxies in lake and marine sediments, vertebrate animal colonies, and extant terrestrial and benthic marine invertebrates, complement other Antarctic paleoclimate archives by recording the nature and rate of past ecological change, the paleoenvironmental drivers of that change, and constrain current ecosystem and climate models. These archives provide invaluable information about terrestrial ice‐free areas, a key location for Antarctic biodiversity, and the continental margin which is important for understanding ice sheet dynamics. Recent significant advances in analytical techniques (e.g., genomics, biogeochemical analyses) have led to new applications and greater power in elucidating the environmental records contained within biological archives. Paleoecological and paleoclimate discoveries derived from biological archives, and integration with existing data from other paleoclimate data sources, will significantly expand our understanding of past, present, and future ecological change, alongside climate change, in a unique, globally significant region. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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162. One Antarctic slug to confuse them all: the underestimated diversity of Doris kerguelenensis
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Maroni, Paige J., Baker, Bill J., Moran, Amy L., Woods, H. Arthur, Avila, Conxita, Johnstone, Glenn J., Stark, Jonathan S., Kocot, Kevin M., Lockhart, Susanne, Saucède, Thomas, Rouse, Greg W., and Wilson, Nerida G.
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- 2022
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163. Crossing the polar front—Antarctic species discovery in the nudibranch genus Tritoniella (Gastropoda).
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Schächinger, Peter M., Schrödl, Michael, Wilson, Nerida G., and Moles, Juan
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VICARIANCE , *DIGESTIVE organs , *GENITALIA , *SCANNING electron microscopy , *SPECIES , *GASTROPODA - Abstract
Tritoniella belli is the only valid species of a nudibranch genus endemic to the Southern Ocean. Recent exhaustive sampling and molecular analyses led to the discovery of several new lineages. A total of 69 specimens were collected from 25 sites across the Weddell and Scotia Seas, from 5 to 751 m depth. In this study, we provide morphological and anatomical characters to describe five new Tritoniella species, namely T. gnocchi n. sp., T. prinzess n. sp., T. gnathodentata n. sp., T. schoriesi n. sp., T. heideae n. sp. Detailed descriptions of colouration, external morphology, digestive and reproductive organs, distribution, and ecology are presented in a systematic context. These are compared to the type material from the Ross Sea of T. belli and its synonym T. sinuata, whose status requires additional sampling to be solved. Discrete differences in external characters, including the shape of dorsal notum ridge and mantle edges, support the species hypotheses delimited by Moles, Berning et al. (2021). Moreover, detailed scanning electron microscopy images of the masticatory border of the jaws, radula teeth, and penial papilla were provided and their differences discussed. The gut content of all species revealed sclerites of Primnoidae gorgonians as their preferred prey. Pseudo-cryptic radiations along the Scotia Arc, explained by the combination of distribution reduction due to glacial cycles and the existence of refugia, and enhanced by their direct development, could explain the allopatric speciation events in Tritoniella species. [ABSTRACT FROM AUTHOR]
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- 2022
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164. Molecular Identification of Larvae of a Tetraphyllidean Tapeworm (Platyhelminthes: Eucestoda) in a Razor Clam as an Alternative Intermediate Host in the Life Cycle of Acanthobothrium brevissime.
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Holland, Nicholas D. and Wilson, Nerida G.
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LARVAL behavior ,PLATYHELMINTHES ,CLAMS ,AMPHIOXUS ,STINGRAYS ,HABITATS - Abstract
Dwarf razor clams (Ensis minor) in the Gulf of Mexico are known to be infected with plerocercoid larvae of a tetraphyllidean tapeworm. Here, we show that these larvae live unencysted in the intestinal lumen of the clam. Morphologically, the larvae are similar to (although significantly larger than) tapeworm larvae previously described living in the gut of amphioxus (Branchiostoma floridae) from the same habitat. Sequence data from the D2 region of the 28S rDNA from claminfecting larvae were identical to the sequence of Acanthobothrium brevissime isolated as larvae from amphioxus and as adults from a stingray (Dasyatis say). The sequence data leave little doubt that the dwarf razor clam and the amphioxus are alternative intermediate hosts in the life cycle of A. brevissime. [ABSTRACT FROM AUTHOR]
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- 2009
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165. Phylotranscriptomics confirms Alveopora is sister to Montipora within the family Acroporidae.
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Richards, Zoe T., Carvajal, Jose I., Wallace, Carden C., and Wilson, Nerida G.
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The genus Alveopora is a scleractinian coral taxon whose phylogenetic classification has recently changed from the family Poritidae to Acroporidae. This change, which was made based on single-locus genetic data, has led to uncertainty about the placement of Alveopora and the ability for deep evolutionary relationships in these groups to be accurately recovered and represented by limited genetic datasets. We sought to characterize the higher-level position of Alveopora using newly available transcriptome data to confirm its placement within Acroporidae and resolve its closest ancestor. Here we present an analysis of a new 2031 gene dataset that confirms the placement of Alveopora within Acroporidae corroborating other single-locus (COI, 16S and ITS) analyses and a mitogenome dataset. We also resolve the position of Alveopora as sister to the genus Montipora. This has allowed the re-interpretation of morphology, and a rediagnosis of the family Acroporidae and the genus Alveopora. • Transcriptomics resolves the coral genus Alveopora inside Acroporidae • Alveopora is the sister to Montipora , not the hypothesized Astreopora • In all Acroporidae, septa are produced by the horizontal growth of synapticular rods inwards from the corallite wall • New systematic diagnoses for the taxa Acroporidae and Alveopora are provided • This study advances scleractinian nomenclatural stability [ABSTRACT FROM AUTHOR]
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- 2020
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166. A newly discovered radiation of endoparasitic gastropods and their coevolution with asteroid hosts in Antarctica.
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Layton, Kara K. S., Rouse, Greg W., and Wilson, Nerida G.
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COEVOLUTION ,STARFISHES ,ASTEROIDS ,CONTINENTAL shelf ,PARASITES ,GASTROPODA ,ENDOPARASITES ,MARINE invertebrates - Abstract
Background: Marine invertebrates are abundant and diverse on the continental shelf in Antarctica, but little is known about their parasitic counterparts. Endoparasites are especially understudied because they often possess highly modified body plans that pose problems for their identification. Asterophila, a genus of endoparasitic gastropod in the family Eulimidae, forms cysts in the arms and central discs of asteroid sea stars. There are currently four known species in this genus, one of which has been described from the Antarctic Peninsula (A. perknasteri). This study employs molecular and morphological data to investigate the diversity of Asterophila in Antarctica and explore cophylogenetic patterns between host and parasite. Results: A maximum-likelihood phylogeny of Asterophila and subsequent species-delimitation analysis uncovered nine well-supported putative species, eight of which are new to science. Most Asterophila species were found on a single host species, but four species were found on multiple hosts from one or two closely related genera, showing phylogenetic conservatism of host use. Both distance-based and event-based cophylogenetic analyses uncovered a strong signal of coevolution in this system, but most associations were explained by non-cospeciation events. Discussion: The prevalence of duplication and host-switching events in Asterophila and its asteroid hosts suggests that synchronous evolution may be rare even in obligate endoparasitic systems. The apparent restricted distribution of Asterophila from around the Scotia Arc may be an artefact of concentrated sampling in the area and a low obvious prevalence of infection. Given the richness of parasites on a global scale, their role in promoting host diversification, and the threat of their loss through coextinction, future work should continue to investigate parasite diversity and coevolution in vulnerable ecosystems. [ABSTRACT FROM AUTHOR]
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- 2019
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167. Integrated evidence reveals a new species in the ancient blue coral genus Heliopora (Octocorallia).
- Author
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Richards, Zoe T., Yasuda, Nina, Kikuchi, Taisei, Foster, Taryn, Mitsuyuki, Chika, Stat, Michael, Suyama, Yoshihisa, and Wilson, Nerida G.
- Abstract
Maintaining the accretion potential and three dimensional structure of coral reefs is a priority but reef-building scleractinian corals are highly threatened and retreating. Hence future reefs are predicted to be dominated by non-constructional taxa. Since the Late Triassic however, other non-scleractinian anthozoans such as Heliopora have contributed to tropical and subtropical reef-building. Heliopora is an ancient and highly conserved reef building octocoral genus within the monospecific Family Helioporidae, represented by a single extant species - H. coerulea, Pallas, 1766. Here we show integrated morphological, genomic and reproductive evidence to substantiate the existence of a second species within the genus Heliopora. Importantly, some individuals of the new species herein described as Heliopora hiberniana sp. nov. feature a white skeleton indicating that the most diagnostic and conserved Heliopora character (the blue skeleton) can be displaced. The new species is currently known only from offshore areas in north Western Australia, which is a part of the world where coral bleaching events have severely impacted the scleractinian community over the last two decades. Field observations indicate individuals of both H. coerulea and H. hiberniana sp. nov. were intact after the 2016 Scott Reef thermal stress event, and we discuss the possibility that bleaching resistant non-scleractinian reef builders such as Heliopora could provide new ecological opportunities for the reconfiguration of future reefs by filling empty niches and functional roles left open by the regression of scleractinian corals. [ABSTRACT FROM AUTHOR]
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- 2018
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168. Correction: Wilson, N.G., et al. Tropical Range Extension for the Temperate, Endemic South-Eastern Australian Nudibranch Goniobranchus splendidus (Angas, 1864). Diversity 2016, 8, 16.
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Wilson, Nerida G., Winters, Anne E., and Cheney, Karen L.
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NUDIBRANCHIA , *SPECIES diversity - Published
- 2018
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169. Correction to Phylogenomic analyses of deep gastropod relationships reject Orthogastropoda.
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Zapata, Felipe, Wilson, Nerida G., Howison, Mark, Andrade, Sónia C. S., Jörger, Katharina M., Schrödl, Michael, Goetz, Freya E., Giribet, Gonzalo, and Dunn, Casey W.
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GENOMICS , *GASTROPODA - Abstract
A correction to the article "Phylogenomic analyses of deep gastropod relationships reject Orthogastropoda" that was published in the 2014 issue is presented.
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- 2015
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170. Genomic insights of evolutionary divergence and life history innovations in Antarctic brittle stars.
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Lau, Sally C. Y., Strugnell, Jan M., Sands, Chester J., Silva, Catarina N. S., and Wilson, Nerida G.
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LIFE history theory , *ANTARCTIC Circumpolar Current , *SINGLE nucleotide polymorphisms , *OCEAN currents , *GENE flow , *ECOSYSTEMS , *MARINE biodiversity - Abstract
Understanding the drivers of evolutionary innovation provides a crucial perspective of how evolutionary processes unfold across taxa and ecological systems. It has been hypothesised that the Southern Ocean provided ecological opportunities for novelty in the past. However, the drivers of innovation are challenging to pinpoint as the evolutionary genetics of Southern Ocean fauna are influenced by Quaternary glacial–interglacial cycles, oceanic currents and species ecology. Here we examined the genome‐wide single nucleotide polymorphisms of the Southern Ocean brittle stars Ophionotus victoriae (five arms, broadcaster) and O. hexactis (six arms, brooder). We found that O. victoriae and O. hexactis are closely‐related species with interspecific gene flow. During the late Pleistocene, O. victoriae likely persisted in a connected deep water refugium and in situ refugia on the Antarctic continental shelf and around Antarctic islands; O. hexactis persisted exclusively within in situ island refugia. Within O. victoriae, contemporary gene flow linking to the Antarctic Circumpolar Current, regional gyres and other local oceanographic regimes was observed. Gene flow connecting West and East Antarctic islands near the Polar Front was also detected in O. hexactis. A strong association was detected between outlier loci and salinity in O. hexactis. Both O. victoriae and O. hexactis are associated with genome‐wide increase in alleles at intermediate‐frequencies; the alleles associated with this peak appear to be species specific, and these intermediate‐frequency variants are far more excessive in O. hexactis. We hypothesise that the peak in alleles at intermediate frequencies could be related to adaptation in the recent past, linked to evolutionary innovations of increase in arm number and a switch to brooding from broadcasting, in O. hexactis. [ABSTRACT FROM AUTHOR]
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- 2023
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171. Cryptic species of Archinome (Annelida: Amphinomida) from vents and seeps.
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Borda, Elizabeth, Kudenov, Jerry D., Chevaldonné, Pierre, Blake, James A., Desbruyères, Daniel, Fabri, Marie-Claire, Hourdez, Stéphane, Pleijel, Fredrik, Shank, Timothy M., Wilson, Nerida G., Schulze, Anja, and Rouse, Greg W.
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AMPHINOMIDA ,CYTOCHROME oxidase ,HYDROTHERMAL vents ,MOLECULAR biology ,ANNELIDA - Abstract
Since its description from the Galapagos Rift in the mid-1980s, Archinome rosacea has been recorded at hydrothermal vents in the Pacific, Atlantic and Indian Oceans. Only recently was a second species described from the Pacific Antarctic Ridge. We inferred the identities and evolutionary relationships of Archinome representatives sampled from across the hydrothermal vent range of the genus, which is now extended to cold methane seeps. Species delimitation using mitochondrial cytochrome c oxidase subunit I (COI) recovered up to six lineages, whereas concatenated datasets (COI, 16S, 28S and ITS1) supported only four or five of these as clades. Morphological approaches alone were inconclusive to verify the identities of species owing to the lack of discrete diagnostic characters. We recognize five Archinome species, with three that are new to science. The new species, designated based on molecular evidence alone, include: Archinome levinae n. sp., which occurs at both vents and seeps in the east Pacific, Archinome tethyana n. sp., which inhabits Atlantic vents and Archinome jasoni n. sp., also present in the Atlantic, and whose distribution extends to the Indian and southwest Pacific Oceans. Biogeographic connections between vents and seeps are highlighted, as are potential evolutionary links among populations from vent fields located in the east Pacific and Atlantic Oceans, and Atlantic and Indian Oceans; the latter presented for the first time. [ABSTRACT FROM AUTHOR]
- Published
- 2013
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172. Clarifying the natural distribution of Saccostrea (edible rock oyster) species in Western Australia to guide development of a fledgling aquaculture industry.
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Snow, Michael, Fotedar, Seema, Wilson, Nerida G., and Kirkendale, Lisa A.
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OLYMPIA oyster , *AQUACULTURE industry , *BIOLOGICAL classification , *SUSTAINABLE aquaculture , *CURRENT distribution - Abstract
Rock oysters of the genus Saccostrea currently form the basis of a significant aquaculture industry in Australia, which is poised for expansion regionally, including within Western Australia. To limit the potential negative consequences of aquaculture-related translocations, current policy in Western Australia requires the local sourcing of rock oyster aquaculture broodstock. This policy, by definition, requires the identification of the optimal aquaculture candidate species from those naturally present in each region under consideration for edible oyster production. Given historical taxonomic confusion, and limited biogeographical data about Saccostrea throughout Western Australia, this study sought to provide baseline distributional data of the genus to underpin the potential development of the industry. A total of 498 oyster specimens were collected across the known range of the genus and vouchered at the Western Australian Museum. Sampling was opportunistic in nature but also included areas with potential or established interest in aquaculture development. All specimens were sequenced for a region of the 16S rRNA gene (488 bp), which is a well-established marker for resolving taxonomy of the genus, with a large comparative dataset available. This new dataset resolved five genetic lineages of rock oyster within the region, which were then mapped to assess distributions. These lineages were designated as Saccostrea lineage A , Saccostrea lineage B , Saccostrea lineage J , S. glomerata , and S. scyphophilla (Peron and Lesueur, 1807), following an established nomenclatural scheme in a group with considerable taxonomic flux. This study extended the known distribution of lineages previously reported in Western Australia (Saccostrea lineage A, and S. scyphophilla) in addition to identifying two previously unrecorded lineages (Saccostrea lineage B and Saccostrea lineage J). Understanding the current distribution and nature of rock oyster distributions in Western Australia is fundamental to the development of a sound policy framework, as well as a research and development strategy for a strong and sustainable aquaculture industry. • Five genetic lineages of rock oyster (Saccostrea) species identified Western Australia. • Mapping the genetic distribution of rock oyster species in Western Australia is guiding aquaculture development. • New species of Saccostrea likely to be described in Western Australia. [ABSTRACT FROM AUTHOR]
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- 2023
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173. Seven snail species hidden in one: Biogeographic diversity in an apparently widespread periwinkle in the Southern Ocean.
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González‐Wevar, Claudio A., Segovia, Nicolás I., Rosenfeld, Sebastián, Maturana, Claudia S., Jeldres, Vanessa, Pinochet, Ramona, Saucède, Thomas, Morley, Simon A., Brickle, Paul, Wilson, Nerida G., Spencer, Hamish G., and Poulin, Elie
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ANTARCTIC Circumpolar Current , *OCEAN , *SNAILS , *SPECIES - Abstract
Aim: The Antarctic Circumpolar Current imparts significant structure to the Southern Ocean biota. The Antarctic Polar Front is a major barrier to dispersal, with separate species (or sometimes intraspecific clades) normally occurring either side of this feature. We examined the biogeographic structure of an apparent exception to this rule in a widespread genus of the Southern Ocean, the periwinkle snail, Laevilitorina. Location: Southern Ocean. Taxon: Littorinidae, Laevilitorininae, Laevilitorina. Methods: Using 750 specimens from 16 Southern Ocean Laevilitorina populations across >8000 km, we analysed mitochondrial COI and nuclear 28S sequences to uncover the evolutionary history of these marine near‐shore snails. We utilized multi‐locus phylogenetic reconstructions, species‐delimitation analyses, divergence‐time estimations and geometric morphometrics. Results: Molecular data revealed that the widespread nominal species L. caliginosa comprises seven species‐level clades, all supported by morphological data, whereas the Antarctic nominal species L. antarctica, L. claviformis and L. umbilicata are conspecific. Six "caliginosa" clades are restricted to southern South America, but one lineage extends from Antarctica to distant sub‐Antarctic islands on both sides of the APF. Geometric morphometrics also identified significant differences among these clades, but uncoupled from genetic differentiation. Main conclusions: The apparent trans‐APF distribution of the poorly dispersing Laevilitorina caliginosa is largely illusory: this taxon consists of at least seven discrete species, only one of which has a trans‐APF distribution. Similar to most Laevilitorina species, the remaining six "caliginosa" clades are narrow endemics. Biogeographical patterns in Laevilitorina reflect the role of vicariance associated with geological processes together with recent long‐distance dispersal events. Laevilitorina originated near the Eocene/Oligocene boundary and diversified during the Miocene and the Pliocene. Laevilitorina is not a cryptic‐species complex: speciation was accompanied by hitherto unrecognized morphological differentiation. This study represents the most detailed molecular work on Southern‐Ocean littorinids and reveals unforeseen diversity across this globally important region. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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174. Reproductive variance in planar spawning Chromodoris species (Mollusca: Nudibranchia).
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Trickey, Jennifer S., Vanner, Jennifer, and Wilson, Nerida G.
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NUDIBRANCHIA , *CLADISTIC analysis , *CHARACTER displacement (Biology) , *COEXISTENCE of species , *BIOLOGICAL classification - Abstract
Although variance in life history parameters is well known from comparisons among broad phylogenetic groups of marine invertebrates, there is still an outstanding need to increase empirical studies that compare closely related species. If the species under study share a recent common ancestor and developmental strategy, there is an opportunity to contrast maternal investment against interspecific variation while controlling for evolutionary distance. Furthermore, when these species co-occur, it allows for exploration of potential character displacement. We examined egg size and other factors related to reproduction in four closely related species, co-occurring nudibranchs belonging to the monophyleticChromodorisplanar spawning clade. The duration of oviposition appeared to be conserved and may be phylogenetically constrained in these four co-occurring species. In contrast, egg size differed significantly among species, but was not influenced by parental body length or position within the egg mass for any of the species. The number of egg mass whorls also varied, but did not correspond to the interspecific differences in parental body length. These results suggest that some significant differences exist among these sympatricChromodorisspecies that may be candidate traits for character displacement. These characters would need to be re-measured in geographic areas where the studiedChromodorisspecies do not co-occur. [ABSTRACT FROM PUBLISHER]
- Published
- 2013
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175. An approach using ddRADseq and machine learning for understanding speciation in Antarctic Antarctophilinidae gastropods.
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Moles, Juan, Derkarabetian, Shahan, Schiaparelli, Stefano, Schrödl, Michael, Troncoso, Jesús S., Wilson, Nerida G., and Giribet, Gonzalo
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MACHINE learning , *GASTROPODA , *NUCLEOTIDE sequencing , *SINGLE nucleotide polymorphisms , *MOLLUSKS - Abstract
Sampling impediments and paucity of suitable material for molecular analyses have precluded the study of speciation and radiation of deep-sea species in Antarctica. We analyzed barcodes together with genome-wide single nucleotide polymorphisms obtained from double digestion restriction site-associated DNA sequencing (ddRADseq) for species in the family Antarctophilinidae. We also reevaluated the fossil record associated with this taxon to provide further insights into the origin of the group. Novel approaches to identify distinctive genetic lineages, including unsupervised machine learning variational autoencoder plots, were used to establish species hypothesis frameworks. In this sense, three undescribed species and a complex of cryptic species were identified, suggesting allopatric speciation connected to geographic or bathymetric isolation. We further observed that the shallow waters around the Scotia Arc and on the continental shelf in the Weddell Sea present high endemism and diversity. In contrast, likely due to the glacial pressure during the Cenozoic, a deep-sea group with fewer species emerged expanding over great areas in the South-Atlantic Antarctic Ridge. Our study agrees on how diachronic paleoclimatic and current environmental factors shaped Antarctic communities both at the shallow and deep-sea levels, promoting Antarctica as the center of origin for numerous taxa such as gastropod mollusks. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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176. A hybrid-capture approach to reconstruct the phylogeny of Scleractinia (Cnidaria: Hexacorallia).
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Quek, Z.B. Randolph, Jain, Sudhanshi S., Richards, Zoe T., Arrigoni, Roberto, Benzoni, Francesca, Hoeksema, Bert W., Carvajal, Jose I., Wilson, Nerida G., Baird, Andrew H., Kitahara, Marcelo V., Seiblitz, Isabela G.L., Vaga, Claudia F., and Huang, Danwei
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SCLERACTINIA , *PHYLOGENY , *ACROPORA , *PERSONAL names , *CNIDARIA , *CORALS - Abstract
• Hybrid capture is a useful large-scale phylogenomic reconstructions. • We perform the largest phylogenomic reconstruction of Scleractinia. • Phylogenetic relationships are resolved, but paraphyletic families remain. • Taxonomic uncertainty is rife, and revisions are urgently required. A well-supported evolutionary tree representing most major lineages of scleractinian corals is in sight with the development and application of phylogenomic approaches. Specifically, hybrid-capture techniques are shedding light on the evolution and systematics of corals. Here, we reconstructed a broad phylogeny of Scleractinia to test previous phylogenetic hypotheses inferred from a few molecular markers, in particular, the relationships among major scleractinian families and genera, and to identify clades that require further research. We analysed 449 nuclear loci from 422 corals, comprising 266 species spanning 26 families, combining data across whole genomes, transcriptomes, hybrid capture and low-coverage sequencing to reconstruct the largest phylogenomic tree of scleractinians to date. Due to the large number of loci and data completeness (less than 38% missing data), node supports were high across shallow and deep nodes with incongruences observed in only a few shallow nodes. The "Robust" and "Complex" clades were recovered unequivocally, and our analyses confirmed that Micrabaciidae Vaughan, 1905 is sister to the "Robust" clade, transforming our understanding of the "Basal" clade. Several families remain polyphyletic in our phylogeny, including Deltocyathiidae Kitahara, Cairns, Stolarski & Miller, 2012, Caryophylliidae Dana, 1846, and Coscinaraeidae Benzoni, Arrigoni, Stefani & Stolarski, 2012, and we hereby formally proposed the family name Pachyseridae Benzoni & Hoeksema to accommodate Pachyseris Milne Edwards & Haime, 1849, which is phylogenetically distinct from Agariciidae Gray, 1847. Results also revealed species misidentifications and inconsistencies within morphologically complex clades, such as Acropora Oken, 1815 and Platygyra Ehrenberg, 1834, underscoring the need for reference skeletal material and topotypes, as well as the importance of detailed taxonomic work. The approach and findings here provide much promise for further stabilising the topology of the scleractinian tree of life and advancing our understanding of coral evolution. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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177. Toxicity and taste: unequal chemical defences in a mimicry ring.
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Winters, Anne E., van den Berg, Cedric P., Cheney, Karen L., Wilson, Nerida G., How, Martin J., Endler, John A., Marshall, N. Justin, White, Andrew M., and Garson, Mary J.
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MIMICRY (Biology) , *DEFENSIVENESS (Psychology) , *APOSEMATISM , *MARINE invertebrates , *NUDIBRANCHIA , *BEHAVIOR , *ANIMAL behavior - Abstract
Mimicry of warning signals is common, and can be mutualistic when mimetic species harbour equal levels of defence (Müllerian), or parasitic when mimics are undefended but still gain protection from their resemblance to the model (Batesian). However, whether chemically defended mimics should be similar in terms of toxicity (i.e. causing damage to the consumer) and/or unpalatability (i.e. distasteful to consumer) is unclear and in many studies remains undifferentiated. In this study, we investigated the evolution of visual signals and chemical defences in a putative mimicry ring of nudibranch molluscs. First, we demonstrated that the appearance of a group of red spotted nudibranchs molluscs was similar from the perspective of potential fish predators using visual modelling and pattern analysis. Second, using phylogenetic reconstruction, we demonstrated that this colour pattern has evolved multiple times in distantly related individuals. Third, we showed that these nudibranchs contained different chemical profiles used for defensive purposes. Finally, we demonstrated that although levels of distastefulness towards Palaemon shrimp remained relatively constant between species, toxicity levels towards brine shrimp varied significantly. We highlight the need to disentangle toxicity and taste when considering chemical defences in aposematic and mimetic species, and discuss the implications for aposematic and mimicry signal evolution. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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178. Distribution of Defensive Metabolites in Nudibranch Molluscs.
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Winters, Anne E., White, Andrew M., Dewi, Ariyanti S., Mudianta, I. Wayan, Wilson, Nerida G., Forster, Louise C., Garson, Mary J., and Cheney, Karen L.
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TERPENES , *ANIMAL chemical defenses , *SEQUESTRATION (Chemistry) , *MOLLUSKS , *NUDIBRANCHIA , *BIOTRANSFORMATION (Metabolism) - Abstract
Many plants and animals store toxic or unpalatable compounds in tissues that are easily encountered by predators during attack. Defensive compounds can be produced
de novo , or obtained from dietary sources and stored directly without selection or modification, or can be selectively sequestered or biotransformed. Storage strategies should be optimized to produce effective defence mechanisms but also prevent autotoxicity of the host. Nudibranch molluscs utilize a diverse range of chemical defences, and we investigated the accumulation and distribution of defensive secondary metabolites in body tissues of 19 species of Chromodorididae nudibranchs. We report different patterns of distribution across tissues, where: 1) the mantle had more or different (but structurally related) compounds than the viscera; 2) all compounds in the mantle were also in the viscera; and 3) the mantle had fewer compounds than the viscera. We found no further examples of species that selectively store a single compound, previously reported inChromodoris species. Consistent with other studies, we found high concentrations of metabolites in mantle rim tissues compared to the viscera. Using bioassays, compounds in the mantle were more toxic than compounds found in the viscera forGlossodoris vespa Rudman, 1990 andCeratosoma brevicaudatum Abraham, 1876. InG. vespa , compounds in the mantle were also more unpalatable to palaemonid shrimp than compounds found in the viscera. This indicates that these species may modify compounds to increase bioactivity for defensive purposes and/or selectively store more toxic compounds. We highlight clear differences in the storage of sequestered chemical defences, which may have important implications for species to employ effective defences against a range of predators. [ABSTRACT FROM AUTHOR]- Published
- 2018
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179. The phylogeny of extant starfish (Asteroidea: Echinodermata) including Xyloplax, based on comparative transcriptomics.
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Jr.Linchangco, Gregorio V., Foltz, David W., Reid, Rob, Williams, John, Nodzak, Conor, Kerr, Alexander M., Miller, Allison K., Hunter, Rebecca, Wilson, Nerida G., Nielsen, William J., Mah, Christopher L., Rouse, Greg W., Wray, Gregory A., and Janies, Daniel A.
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FOSSIL starfishes , *ECHINODERMATA phylogeny , *AQUATIC animal genetics , *RNA sequencing , *COMPARATIVE genomics - Abstract
Multi-locus phylogenetic studies of echinoderms based on Sanger and RNA-seq technologies and the fossil record have provided evidence for the Asterozoa-Echinozoa hypothesis. This hypothesis posits a sister relationship between asterozoan classes (Asteroidea and Ophiuroidea) and a similar relationship between echinozoan classes (Echinoidea and Holothuroidea). Despite this consensus around Asterozoa-Echinozoa, phylogenetic relationships within the class Asteroidea (sea stars or starfish) have been controversial for over a century. Open questions include relationships within asteroids and the status of the enigmatic taxon Xyloplax . Xyloplax is thought by some to represent a newly discovered sixth class of echinoderms – and by others to be an asteroid. To address these questions, we applied a novel workflow to a large RNA-seq dataset that encompassed a broad taxonomic and genomic sample. This study included 15 species sampled from all extant orders and 13 families, plus four ophiuroid species as an outgroup. To expand the taxonomic coverage, the study also incorporated five previously published transcriptomes and one previously published expressed sequence tags (EST) dataset. We developed and applied methods that used a range of alignment parameters with increasing permissiveness in terms of gap characters present within an alignment. This procedure facilitated the selection of phylogenomic data subsets from large amounts of transcriptome data. The results included 19 nested data subsets that ranged from 37 to 4,281 loci. Tree searches on all data subsets reconstructed Xyloplax as a velatid asteroid rather than a new class. This result implies that asteroid morphology remains labile well beyond the establishment of the body plan of the group. In the phylogenetic tree with the highest average asteroid nodal support several monophyletic groups were recovered. In this tree, Forcipulatida and Velatida are monophyletic and form a clade that includes Brisingida as sister to Forcipulatida. Xyloplax is consistently recovered as sister to Pteraster . Paxillosida and Spinulosida are each monophyletic, with Notomyotida as sister to the Paxillosida. Valvatida is recovered as paraphyletic. The results from other data subsets are largely consistent with these results. Our results support the hypothesis that the earliest divergence event among extant asteroids separated Velatida and Forcipulatacea from Valvatacea and Spinulosida. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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180. Stabilizing selection on individual pattern elements of aposematic signals.
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Winters, Anne E., Green, Naomi F., Cheney, Karen L., Wilson, Nerida G., How, Martin J., Garson, Mary J., and Marshall, N. Justin
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NUDIBRANCHIA , *MARINE organisms , *BALISTIDAE , *PREDATORY animals , *WARNINGS - Abstract
Warning signal variation is ubiquitous but paradoxical: low variability should aid recognition and learning by predators. However, spatial variability in the direction and strength of selection for individual elements of the warning signal may allow phenotypic variation for some components, but not others. Variation in selection may occur if predators only learn particular colour pattern components rather than the entire signal. Here, we used a nudibranch mollusc, Goniobranchus splendidus, which exhibits a conspicuous red spot/ white body/yellow rim colour pattern, to test this hypothesis. We first demonstrated that secondary metabolites stored within the nudibranch were unpalatable to a marine organism. Using pattern analysis, we demonstrated that the yellow rim remained invariable within and between populations; however, red spots varied significantly in both colour and pattern. In behavioural experiments, a potential fish predator, Rhinecanthus aculeatus, used the presence of the yellow rims to recognize and avoid warning signals. Yellow rims remained stable in the presence of high genetic divergence among populations. We therefore suggest that how predators learn warning signals may cause stabilizing selection on individual colour pattern elements, and will thus have important implications on the evolution of warning signals. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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181. Species Selection Favors Dispersive Life Histories in Sea Slugs, but Higher Per-Offspring Investment Drives Shifts to Short-Lived Larvae.
- Author
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KRUG, PATRICK J., VENDETTI, JANN E., ELLINGSON, RYAN A., TRATHEN, DANIELLE Y., RODRIGUEZ, ALBERT K., TROWBRIDGE, CYNTHIA D., HIRANO, YAYOI M., SWENNEN, CORNELIS, WILSON, NERIDA G., and VALDÉS, ÁNGEL A.
- Subjects
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ANIMAL species , *NUDIBRANCHIA , *SACOGLOSSA , *LIFE history theory , *MOLLUSK larvae , *GENETIC speciation - Abstract
For 40 years, paleontological studies of marine gastropods have suggested that species selection favors lineages with short-lived (lecithotrophic) larvae, which are less dispersive than long-lived (planktotrophic) larvae. Although lecithotrophs appeared to speciate more often and accumulate over time in some groups, lecithotrophy also increased extinction rates, and tests for state-dependent diversificationwere never performed. Molecular phylogenies of diverse groups instead suggested lecithotrophs accumulate without diversifying due to frequent, unidirectional character change. Although lecithotrophy has repeatedly originated in most phyla, no adult trait has been correlated with shifts in larval type. Thus, both the evolutionary origins of lecithotrophy and its consequences for patterns of species richness remain poorly understood. Here, we test hypothesized links between development mode and evolutionary rates using likelihood-based methods and a phylogeny of 202 species of gastropod molluscs in Sacoglossa, a clade of herbivorous sea slugs. Evolutionary quantitative genetics modeling and stochastic character mapping supported 27 origins of lecithotrophy. Tests for correlated evolution revealed lecithotrophy evolved more often in lineages investing in extra-embryonic yolk, the first adult trait associated with shifts in development mode across a group. However, contrary to predictions from paleontological studies, species selection actually favored planktotrophy; most extant lecithotrophs originated through recent character change, and did not subsequently diversify. Increased offspring provisioning in planktotrophs thus favored shifts to short-lived larvae, which led to short-lived lineages over macroevolutionary time scales. These findings challenge long-standing assumptions about the effects of alternative life histories in the sea. Species selection can explain the long-termpersistence of planktotrophy, the ancestral state in most clades, despite frequent transitions to lecithotrophy. [ABSTRACT FROM AUTHOR]
- Published
- 2015
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182. Phylogeography of recent Plesiastrea (Scleractinia: Plesiastreidae) based on an integrated taxonomic approach.
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Juszkiewicz, David J., White, Nicole E., Stolarski, Jarosław, Benzoni, Francesca, Arrigoni, Roberto, Hoeksema, Bert W., Wilson, Nerida G., Bunce, Michael, and Richards, Zoe T.
- Subjects
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SCLERACTINIA , *MARINE invertebrates , *GEOGRAPHY , *CORALS , *PHYLOGEOGRAPHY , *MULTIVARIATE analysis - Abstract
[Display omitted] Scleractinian corals are a diverse group of ecologically important yet highly threatened marine invertebrates, which can be challenging to identify to the species level. An influx of molecular studies has transformed scleractinian systematics, highlighting that cryptic species may be more common than previously understood. In this study, we test the hypothesis that Plesiastrea versipora (Lamarck, 1816), a species currently considered to occur throughout the Indo-Pacific in tropical, sub-tropical and temperate waters, is a single species. Molecular and morphological analyses were conducted on 80 samples collected from 31 sites spanning the majority of the species putative range and twelve mitogenomes were assembled to identify informative regions for phylogenetic reconstruction. Congruent genetic data across three gene regions supports the existence of two monophyletic clades aligning with distinct tropical and temperate provenances. Multivariate macromorphological analyses based on 13 corallite characters provided additional support for the phylogeographic split, with the number of septa and corallite density varying across this biogeographic divide. Furthermore, micromorphological and microstructural analyses identified that the temperate representatives typically develop sub-cerioid corallites with sparse or absent coenosteal features and smooth septal faces. In contrast, tropical representatives typically develop plocoid corallites separated by a porous dissepimental coenosteum and have granulated septal faces. These data suggest that at least two species exist within the genus Plesiastrea Milne Edwards & Haime, 1848. Based on examination of type material, we retain the name Plesiastrea versipora (Lamarck, 1816) for the temperate representatives of the genus and resurrect the name Plesiastrea peroni Milne Edwards & Haime, 1857 for the tropical members. This study highlights how broadly distributed hard coral taxa still need careful re-examination through an integrated systematics approach to better understand their phylogeographic patterns. Furthermore, it demonstrates the utility of integrating micro-, macro-morphological and genetic datasets, and the importance of type specimens when dealing with taxonomic revisions of scleractinian taxa. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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183. Modern dynamics, morphology and habitats of slope-confined canyons on the northwest Australian margin.
- Author
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Post, Alexandra L., Przeslawski, Rachel, Nanson, Rachel, Siwabessy, Justy, Smith, Deborah, Kirkendale, Lisa A., and Wilson, Nerida G.
- Subjects
- *
CANYONS , *SUBMARINE valleys , *CLIFFS , *MULTIBEAM mapping , *CONTINENTAL slopes , *TURBIDITY currents , *MARINE habitats , *EDGE effects (Ecology) - Abstract
Repeat multibeam mapping of two slope-confined canyons on the northwest Australian margin provides new understanding of the processes that are active in shaping these environments. The Cape Range and Cloates canyons initiate on the mid to lower continental slope but are now known to be connected to the shelf via small channels and gullies. Both canyons have areas of steep walls, with evidence of slides, and large depressions on the canyon floors. These canyons were first mapped systematically with multibeam sonar in 2008 and were remapped in 2020 during a biodiversity survey that also collected high-resolution imagery and biological samples. Comparison of seabed features between these two time periods indicates active sliding, minor headwall retreat and continued excavation of deep depressions on the canyon floor. Significantly, intact blades of displaced seagrass imaged at various depths up to 4200 m throughout both canyons indicates that material sourced from the adjacent continental shelf is being transported through these canyon systems. Turbidity currents are actively modifying canyon walls and floor depressions, while also providing a sediment source that has resulted in minor accretion on the canyon floor. Sedimentation likely regulates benthic communities in these canyons, with imagery showing highest densities of sessile invertebrates in habitats protected from sedimentation (e.g. rock overhangs, cliff edges). Since steep canyon habitats are rare within these canyons, and support high benthic abundance, they likely represent biologically significant areas of the Gascoyne Marine Park. Repeat mapping provides an understanding of the dynamics of these canyons and a context for assessing and monitoring the stability of the seabed habitats within this marine reserve. • Repeat mapping of slope-confined submarine canyons reveals active sedimentary processes on a passive continental margin. • Both canyons contain evidence for active sliding, minor headwall retreat and continued excavation of deep floor depressions. • Intact displaced seagrass blades indicate channelling of material from the continental shelf through these canyon systems. • Sessile invertebrates have highest densities in rare habitats protected from sedimentation, such as on rock overhangs. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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184. New carnivorous sponges (Porifera: Cladorhizidae) from Western Australia, collected by a Remotely Operated Vehicle (ROV).
- Author
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Ekins M and Wilson NG
- Subjects
- Animals, Western Australia, Ecosystem, Phylogeny, Porifera
- Abstract
The last two decades have reinvigorated systematic research on predatory sponges, mainly fuelled by advances in technology that have facilitated collection in deep-water habitats. This research presents six new species of carnivorous sponges from the family Cladorhizidae Dendy, 1922 from the western continental margin of Australia. The new species are Abyssocladia johnhooperi nov. sp., Abyssocladia aurora nov. sp., Abyssocladia janusi nov. sp., Axoniderma challengeri nov. sp., Cladorhiza vanessaekins nov. sp. and Nullarbora ningalooa nov. sp.. This material was collected by ROV during expeditions FK200308 to the Ningaloo Canyons expedition off the mid-west coast near Ningaloo, and FK200126 to the Southwest Australian canyons expedition, in Western Australia. These and other expeditions by the Schmidt Ocean Institute in 2020-21 formed a campaign around Australia's deep sea and mesophotic environments, which has vastly increased our understanding of biodiversity in these habitats., (© 2024. Crown.)
- Published
- 2024
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185. Validating a molecular clock for nudibranchs-No fossils to the rescue.
- Author
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Layton KKS and Wilson NG
- Abstract
Time calibrated phylogenies are typically reconstructed with fossil information but for soft-bodied marine invertebrates that lack hard parts, a fossil record is lacking. In these cases, biogeographic calibrations or the rates of divergence for related taxa are often used. Although nudibranch phylogenies have advanced with the input of molecular data, no study has derived a divergence rate for this diverse group of invertebrates. Here, we use an updated closure date for the Isthmus of Panama (2.8 Ma) to derive the first divergence rates for chromodorid nudibranchs using multigene data from a geminate pair with broad phylogeographic sampling. Examining the species Chromolaichma sedna (Marcus & Marcus, 1967), we uncover deep divergences among eastern Pacific and western Atlantic clades and we erect a new species designation for the latter ( Chromolaichma hemera sp. nov.). Next, we discover extensive phylogeographic structure within C. hemera sp. nov. sensu lato , thereby refuting the hypothesis of a recent introduction. Lastly, we derive divergence rates for mitochondrial and nuclear loci that exceed known rates for other gastropods and we highlight significant rate heterogeneity both among markers and taxa. Together, these findings improve understanding of nudibranch systematics and provide rates useful to apply to divergence scenarios in this diverse group., Competing Interests: The authors declare that there are no conflicts of interest., (© 2024 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd.)
- Published
- 2024
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186. Genomic evidence for West Antarctic Ice Sheet collapse during the Last Interglacial.
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Lau SCY, Wilson NG, Golledge NR, Naish TR, Watts PC, Silva CNS, Cooke IR, Allcock AL, Mark FC, Linse K, and Strugnell JM
- Subjects
- Antarctic Regions, Genomics, Seawater, Temperature, Polymorphism, Single Nucleotide, Animals, Ice Cover, Global Warming, Octopodiformes genetics
- Abstract
The marine-based West Antarctic Ice Sheet (WAIS) is considered vulnerable to irreversible collapse under future climate trajectories, and its tipping point may lie within the mitigated warming scenarios of 1.5° to 2°C of the United Nations Paris Agreement. Knowledge of ice loss during similarly warm past climates could resolve this uncertainty, including the Last Interglacial when global sea levels were 5 to 10 meters higher than today and global average temperatures were 0.5° to 1.5°C warmer than preindustrial levels. Using a panel of genome-wide, single-nucleotide polymorphisms of a circum-Antarctic octopus, we show persistent, historic signals of gene flow only possible with complete WAIS collapse. Our results provide the first empirical evidence that the tipping point of WAIS loss could be reached even under stringent climate mitigation scenarios.
- Published
- 2023
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187. Range-wide population genomics of common seadragons shows secondary contact over a former barrier and insights on illegal capture.
- Author
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Stiller J, Wilson NG, and Rouse GW
- Subjects
- Humans, Animals, Phylogeny, Biodiversity, Australia, Genetic Variation, Metagenomics, Smegmamorpha
- Abstract
Background: Common seadragons (Phyllopteryx taeniolatus, Syngnathidae) are an emblem of the diverse endemic fauna of Australia's southern rocky reefs, the newly recognized "Great Southern Reef." A lack of assessments spanning this global biodiversity hotspot in its entirety is currently hampering an understanding of the factors that have contributed to its diversity. The common seadragon has a wide range across Australia's entire temperate south and includes a geogenetic break over a former land bridge, which has called its status as a single species into question. As a popular aquarium display that sells for high prices, common seadragons are also vulnerable to illegal capture., Results: Here, we provide range-wide nuclear sequences (986 variable Ultraconserved Elements) for 198 individuals and mitochondrial genomes for 140 individuals to assess species status, identify genetic units and their diversity, and trace the source of two poached individuals. Using published data of the other two seadragon species, we found that lineages of common seadragons have diverged relatively recently (< 0.63 Ma). Within common seadragons, we found pronounced genetic structure, falling into three major groups in the western, central, and eastern parts of the range. While populations across the Bassian Isthmus were divergent, there is also evidence for secondary contact since the passage opened. We found a strong cline of genetic diversity from the range center tapering symmetrically towards the range peripheries. Based on their genetic similarities, the poached individuals were inferred to have originated from around Albany in southwestern Australia., Conclusions: We conclude that common seadragons constitute a single species with strong geographic structure but coherence through gene flow. The low genetic diversity on the east and west coasts is concerning given that these areas are projected to face fast climate change. Our results suggest that in addition to their life history, geological events and demographic expansions have all played a role in shaping populations in the temperate south. These insights are an important step towards understanding the historical determinants of the diversity of species endemic to the Great Southern Reef., (© 2023. The Author(s).)
- Published
- 2023
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188. Multiple Doris " kerguelenensis " (Nudibranchia) species span the Antarctic Polar Front.
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Maroni PJ and Wilson NG
- Abstract
Despite strong historical biogeographical links between benthic faunal assemblages of the Magellan region of South America and the Antarctic Peninsula, very few studies have documented contemporary movement and gene flow in or out of the Southern Ocean, especially across the Antarctic Polar Front (APF). In fact, oceanographic barriers such as the APF and Antarctica's long geologic isolation have substantially separated the continents and facilitated the evolution of endemic marine taxa found within the Antarctic region. The Southern Ocean benthic sea slug complex, Doris " kerguelenensis ," are a group of direct-developing, simultaneous hermaphrodites that lack a dispersive larval stage. To date, there are 59 highly divergent species known within this complex. Here, we provide evidence to show intraspecific genetic connectivity occurs across the APF for multiple species within the D. " kerguelenensis " nudibranch species complex. We addressed questions of genetic connectivity by examining the phylogeographic structure of the three best-sampled D. " kerguelenensis " species and another three trans-APF species using the protein coding mtDNA gene, cytochrome oxidase I. We also highlight alternative refugia uses among species with the same life history traits (i.e., benthic and direct developers) and for some species, extremely large distributions are established (e.g., circumpolarity). By improving our sampling of these nudibranchs, we gain better insight into the population structure and connectivity of the Antarctic region. This work also demonstrates how difficult it is to make generalizations across Antarctic marine species, even among ecologically-similar, closely related species., Competing Interests: We have no conflicts of interest to declare., (© 2022 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd.)
- Published
- 2022
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189. Chemistry and Bioactivity of the Deep-Water Antarctic Octocoral Alcyonium sp.
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Limon AD, Patabendige HMLW, Azhari A, Sun X, Kyle DE, Wilson NG, and Baker BJ
- Subjects
- Animals, Antarctic Regions, DNA, Esters, Nitrates, Water, Anthozoa chemistry, Clostridioides difficile, Leishmania donovani, Sesquiterpenes chemistry
- Abstract
Chemical investigation of an Antarctic deep-water octocoral has led to the isolation of four new compounds, including three illudalane sesquiterpenoids ( 1 - 3 ) related to the alcyopterosins, a highly oxidized steroid, alcyosterone ( 5 ), and five known alcyopterosins ( 4 , 6 - 9 ). The structures were established by extensive 1D and 2D NMR analyses, while 9 was verified by XRD. Alcyopterosins are unusual for their nitrate ester functionalization and have been characterized with cytotoxicity related to their DNA binding properties. Alcyopterosins V ( 3 ) and E ( 4 ) demonstrated single-digit micromolar activity against Clostridium difficile , an intestinal bacterium capable of causing severe diarrhea that is increasingly associated with drug resistance. Alcyosterone ( 5 ) and several alcyopterosins were similarly potent against the protist Leishmania donovani , the causative agent of leishmaniasis, a disfiguring disease that can be fatal if not treated. While the alcyopterosin family of sesquiterpenes is known for mild cytotoxicity, the observed activity against C. difficile and L. donovani is selective for the infectious agents., Competing Interests: The authors declare no conflict of interest.
- Published
- 2022
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190. Australindolones, New Aminopyrimidine Substituted Indolone Alkaloids from an Antarctic Tunicate Synoicum sp.
- Author
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Kokkaliari S, Pham K, Shahbazi N, Calcul L, Wojtas L, Wilson NG, Crawford AD, and Baker BJ
- Subjects
- Animals, Antarctic Regions, Embryo, Nonmammalian abnormalities, Embryo, Nonmammalian drug effects, Zebrafish, Indole Alkaloids chemistry, Indole Alkaloids toxicity, Pyrimidines chemistry, Pyrimidines toxicity, Urochordata chemistry
- Abstract
Five new alkaloids have been isolated from the lipophilic extract of the Antarctic tunicate Synoicum sp. Deep-sea specimens of Synoicum sp. were collected during a 2011 cruise of the R/V Nathanial B. Palmer to the southern Scotia Arc, Antarctica. Crude extracts from the invertebrates obtained during the cruise were screened in a zebrafish-based phenotypic assay. The Synoicum sp. extract induced embryonic dysmorphology characterized by axis truncation, leading to the isolation of aminopyrimidine substituted indolone ( 1 - 4 ) and indole ( 5 - 12 ) alkaloids. While the primary bioactivity tracked with previously reported meridianins A-G ( 5 - 11 ), further investigation resulted in the isolation and characterization of australindolones A-D ( 1 - 4 ) and the previously unreported meridianin H ( 12 ).
- Published
- 2022
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- View/download PDF
191. The Leafy Seadragon, Phycodurus eques, a Flagship Species with Low But Structured Genetic Variability.
- Author
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Stiller J, Wilson NG, Donnellan S, and Rouse GW
- Subjects
- Animals, Australia, Ecosystem, Genetic Variation, DNA, Mitochondrial genetics, Genetics, Population, Microsatellite Repeats, Phylogeny, Smegmamorpha classification
- Abstract
The leafy seadragon (Phycodurus eques, Syngnathidae), is a charismatic endemic of Australia’s temperate coast. The species exhibits remarkable camouflage in its kelp and seagrass habitat. These habitats have been retreating throughout the range of the species, leading to concerns about the persistence of leafy seadragons. Despite being a popular aquarium display and a flagship for coastal conservation, little is known about leafy seadragon biology. We used 7 microsatellite markers and 2 mitochondrial DNA fragments to investigate the population structuring and genetic diversity of 71 individuals. Bayesian cluster analysis identified 2 main genetic partitions, one in Western Australia and the other in South Australia. Shallower, yet significant, differentiation of mitochondrial DNA (φST) and microsatellites (FST, F′ST, D) was found on the smaller geographic scales in South Australia. Distinct groups were supported in Encounter Bay, on both shores of Gulf St Vincent, and in Spencer Gulf. Sample sizes were too small in the eastern Great Australian Bight and in the westernmost locality to address genetic differentiation in these regions. Overall genetic diversity was moderate to low, but particularly low levels were found in the Western Australian cluster. This latter point needs confirmation at other sites in Western Australia. In South Australia, signatures of demographic changes were detected, which may have been caused by a population expansion due to post-glacial reflooding of the gulfs. The Western Australian and South Australian clusters appeared as demographically independent units. Conservation actions should focus on preserving genetic diversity at local scales and maintaining habitat connectivity.
- Published
- 2017
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192. New deep-sea species of Xenoturbella and the position of Xenacoelomorpha.
- Author
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Rouse GW, Wilson NG, Carvajal JI, and Vrijenhoek RC
- Subjects
- Animals, Aquatic Organisms genetics, Atlantic Ocean, Bayes Theorem, California, Female, Genes, Genome, Mitochondrial genetics, Hydrothermal Vents, Likelihood Functions, Male, Mexico, Models, Biological, Pacific Ocean, Species Specificity, Sweden, Transcriptome genetics, Aquatic Organisms classification, Phylogeny
- Abstract
The discovery of four new Xenoturbella species from deep waters of the eastern Pacific Ocean is reported here. The genus and two nominal species were described from the west coast of Sweden, but their taxonomic placement remains unstable. Limited evidence placed Xenoturbella with molluscs, but the tissues can be contaminated with prey. They were then considered deuterostomes. Further taxon sampling and analysis have grouped Xenoturbella with acoelomorphs (=Xenacoelomorpha) as sister to all other Bilateria (=Nephrozoa), or placed Xenacoelomorpha inside Deuterostomia with Ambulacraria (Hemichordata + Echinodermata). Here we describe four new species of Xenoturbella and reassess those hypotheses. A large species (>20 cm long) was found at cold-water hydrocarbon seeps at 2,890 m depth in Monterey Canyon and at 1,722 m in the Gulf of California (Mexico). A second large species (~10 cm long) also occurred at 1,722 m in the Gulf of California. The third large species (~15 cm long) was found at ~3,700 m depth near a newly discovered carbonate-hosted hydrothermal vent in the Gulf of California. Finally, a small species (~2.5 cm long), found near a whale carcass at 631 m depth in Monterey Submarine Canyon (California), resembles the two nominal species from Sweden. Analysis of whole mitochondrial genomes places the three larger species as a sister clade to the smaller Atlantic and Pacific species. Phylogenomic analyses of transcriptomic sequences support placement of Xenacoelomorpha as sister to Nephrozoa or Protostomia.
- Published
- 2016
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193. Regional differentiation and extensive hybridization between mitochondrial clades of the Southern Ocean giant sea spider Colossendeis megalonyx.
- Author
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Dietz L, Arango CP, Dömel JS, Halanych KM, Harder AM, Held C, Mahon AR, Mayer C, Melzer RR, Rouse GW, Weis A, Wilson NG, and Leese F
- Abstract
Assessing the enormous diversity of Southern Ocean benthic species and their evolutionary histories is a central task in the era of global climate change. Based on mitochondrial markers, it was recently suggested that the circumpolar giant sea spider Colossendeis megalonyx comprises a complex of at least six cryptic species with mostly small and non-overlapping distribution ranges. Here, we expand the sampling to include over 500 mitochondrial COI sequences of specimens from around the Antarctic. Using multiple species delimitation approaches, the number of distinct mitochondrial OTUs increased from six to 15-20 with our larger dataset. In contrast to earlier studies, many of these clades show almost circumpolar distributions. Additionally, analysis of the nuclear internal transcribed spacer region for a subset of these specimens showed incongruence between nuclear and mitochondrial results. These mito-nuclear discordances suggest that several of the divergent mitochondrial lineages can hybridize and should not be interpreted as cryptic species. Our results suggest survival of C. megalonyx during Pleistocene glaciations in multiple refugia, some of them probably located on the Antarctic shelf, and emphasize the importance of multi-gene datasets to detect the presence of cryptic species, rather than their inference based on mitochondrial data alone.
- Published
- 2015
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194. Phylogenomic analyses of deep gastropod relationships reject Orthogastropoda.
- Author
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Zapata F, Wilson NG, Howison M, Andrade SC, Jörger KM, Schrödl M, Goetz FE, Giribet G, and Dunn CW
- Subjects
- Animals, Sequence Analysis, RNA, Evolution, Molecular, Gastropoda classification, Gastropoda genetics, Genome genetics, Phylogeny, Transcriptome genetics
- Abstract
Gastropods are a highly diverse clade of molluscs that includes many familiar animals, such as limpets, snails, slugs and sea slugs. It is one of the most abundant groups of animals in the sea and the only molluscan lineage that has successfully colonized land. Yet the relationships among and within its constituent clades have remained in flux for over a century of morphological, anatomical and molecular study. Here, we re-evaluate gastropod phylogenetic relationships by collecting new transcriptome data for 40 species and analysing them in combination with publicly available genomes and transcriptomes. Our datasets include all five main gastropod clades: Patellogastropoda, Vetigastropoda, Neritimorpha, Caenogastropoda and Heterobranchia. We use two different methods to assign orthology, subsample each of these matrices into three increasingly dense subsets, and analyse all six of these supermatrices with two different models of molecular evolution. All 12 analyses yield the same unrooted network connecting the five major gastropod lineages. This reduces deep gastropod phylogeny to three alternative rooting hypotheses. These results reject the prevalent hypothesis of gastropod phylogeny, Orthogastropoda. Our dated tree is congruent with a possible end-Permian recovery of some gastropod clades, namely Caenogastropoda and some Heterobranchia subclades., (© 2014 The Author(s) Published by the Royal Society. All rights reserved.)
- Published
- 2014
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195. Cryptic species of Archinome (Annelida: Amphinomida) from vents and seeps.
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Borda E, Kudenov JD, Chevaldonné P, Blake JA, Desbruyères D, Fabri MC, Hourdez S, Pleijel F, Shank TM, Wilson NG, Schulze A, and Rouse GW
- Subjects
- Animals, DNA, Intergenic genetics, DNA, Intergenic metabolism, DNA, Mitochondrial metabolism, Ecosystem, Electron Transport Complex IV genetics, Electron Transport Complex IV metabolism, Hydrothermal Vents, Molecular Sequence Data, Polychaeta anatomy & histology, Polychaeta genetics, RNA, Ribosomal genetics, RNA, Ribosomal metabolism, Sequence Analysis, DNA, DNA, Mitochondrial genetics, Phylogeny, Polychaeta classification, Polychaeta physiology
- Abstract
Since its description from the Galapagos Rift in the mid-1980s, Archinome rosacea has been recorded at hydrothermal vents in the Pacific, Atlantic and Indian Oceans. Only recently was a second species described from the Pacific Antarctic Ridge. We inferred the identities and evolutionary relationships of Archinome representatives sampled from across the hydrothermal vent range of the genus, which is now extended to cold methane seeps. Species delimitation using mitochondrial cytochrome c oxidase subunit I (COI) recovered up to six lineages, whereas concatenated datasets (COI, 16S, 28S and ITS1) supported only four or five of these as clades. Morphological approaches alone were inconclusive to verify the identities of species owing to the lack of discrete diagnostic characters. We recognize five Archinome species, with three that are new to science. The new species, designated based on molecular evidence alone, include: Archinome levinae n. sp., which occurs at both vents and seeps in the east Pacific, Archinome tethyana n. sp., which inhabits Atlantic vents and Archinome jasoni n. sp., also present in the Atlantic, and whose distribution extends to the Indian and southwest Pacific Oceans. Biogeographic connections between vents and seeps are highlighted, as are potential evolutionary links among populations from vent fields located in the east Pacific and Atlantic Oceans, and Atlantic and Indian Oceans; the latter presented for the first time.
- Published
- 2013
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196. Bioluminescent signals spatially amplified by wavelength-specific diffusion through the shell of a marine snail.
- Author
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Deheyn DD and Wilson NG
- Subjects
- Animal Communication, Animals, Behavior, Animal, Physical Stimulation, Snails anatomy & histology, Light, Snails physiology
- Abstract
Some living organisms produce visible light (bioluminescence) for intra- or interspecific visual communication. Here, we describe a remarkable bioluminescent adaptation in the marine snail Hinea brasiliana. This species produces a luminous display in response to mechanical stimulation caused by encounters with other motile organisms. The light is produced from discrete areas on the snail's body beneath the snail's shell, and must thus overcome this structural barrier to be viewed by an external receiver. The diffusion and transmission efficiency of the shell is greater than a commercial diffuser reference material. Most strikingly, the shell, although opaque and pigmented, selectively diffuses the blue-green wavelength of the species bioluminescence. This diffusion generates a luminous display that is enlarged relative to the original light source. This unusual shell thus allows spatially amplified outward transmission of light communication signals from the snail, while allowing the animal to remain safely inside its hard protective shell.
- Published
- 2011
- Full Text
- View/download PDF
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