5,076 results on '"S. Jensen"'
Search Results
152. Stochastic skyline route planning under time-varying uncertainty.
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Bin Yang 0002, Chenjuan Guo, Christian S. Jensen, Manohar Kaul, and Shuo Shang
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- 2014
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153. Scalable top-k spatio-temporal term querying.
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Anders Skovsgaard, Darius Sidlauskas, and Christian S. Jensen
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- 2014
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154. Designing interactive listening situations.
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Jonas Fritsch, Morten Breinbjerg, and Tue S. Jensen
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- 2014
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155. Concise caching of driving instructions.
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Jeppe Rishede Thomsen, Man Lung Yiu, and Christian S. Jensen
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- 2014
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156. Top-k point of interest retrieval using standard indexes.
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Anders Skovsgaard and Christian S. Jensen
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- 2014
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157. Using Cameras to Improve Wi-Fi Based Indoor Positioning.
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Laura Radaelli, Yael Moses, and Christian S. Jensen
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- 2014
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158. Interestingness-Driven Diffusion Process Summarization in Dynamic Networks.
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Qiang Qu, Siyuan Liu, Christian S. Jensen, Feida Zhu 0001, and Christos Faloutsos
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- 2014
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159. Enabling Time-Dependent Uncertain Eco-Weights For Road Networks.
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Yu Ma, Bin Yang 0002, and Christian S. Jensen
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- 2014
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160. Efficient Top-k Spatial Locality Search for Co-located Spatial Web Objects.
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Qiang Qu, Siyuan Liu, Bin Yang 0002, and Christian S. Jensen
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- 2014
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161. A Clustering Approach to the Discovery of Points of Interest from Geo-Tagged Microblog Posts.
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Anders Skovsgaard, Darius Sidlauskas, and Christian S. Jensen
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- 2014
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162. Heat Therapy Can Improve Hepatic Mitochondrial Function and Glucose Control
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Chelsea N. Johnson, Reilly S. Jensen, Alex T. Von Schulze, and Paige C. Geiger
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Physical Therapy, Sports Therapy and Rehabilitation ,Orthopedics and Sports Medicine - Published
- 2022
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163. Anticonvulsants in the management of chronic pain
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Troels S. Jensen, Cathrine Baastrup, Nanna B. Finnerup, Lynch, Mary E., Craig, Kenneth D., and Peng, Philip W. H.
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Migraine ,Gabapentin ,business.industry ,Fibromyalgia ,Anesthesia ,Neuropathic pain ,Chronic pain ,medicine ,Pregabalin ,Carbamazepine ,medicine.disease ,business ,medicine.drug - Published
- 2022
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164. Axonal Excitability Does Not Differ between Painful and Painless Diabetic or Chemotherapy‐Induced Distal Symmetrical Polyneuropathy in a Multicenter Observational Study
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Andreas C. Themistocleous, Alexander G. Kristensen, Roma Sola, Sandra S. Gylfadottir, Kristine Bennedsgaard, Mustapha Itani, Thomas Krøigård, Lise Ventzel, Søren H. Sindrup, Troels S. Jensen, Hugh Bostock, Jordi Serra, Nanna B. Finnerup, Hatice Tankisi, and David L. H. Bennett
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Polyneuropathies ,Diabetic Neuropathies ,Neurology ,Diabetes Mellitus ,Humans ,Neuralgia ,Antineoplastic Agents ,Neurology (clinical) ,Axons - Abstract
Objective: Axonal excitability reflects ion channel function, and it is proposed that this may be a biomarker in painful (vs painless) polyneuropathy. Our objective was to investigate the relationship between axonal excitability parameters and chronic neuropathic pain in deeply phenotyped cohorts with diabetic or chemotherapy-induced distal symmetrical polyneuropathy. Methods: Two hundred thirty-nine participants with diabetic polyneuropathy were recruited from sites in the UK and Denmark, and 39 participants who developed chemotherapy-induced polyneuropathy were recruited from Denmark. Participants were separated into those with probable or definite neuropathic pain and those without neuropathic pain. Axonal excitability of large myelinated fibers was measured with the threshold tracking technique. The stimulus site was the median nerve, and the recording sites were the index finger (sensory studies) and abductor pollicis brevis muscle (motor studies). Results: Participants with painless and painful polyneuropathy were well matched across clinical variables. Sensory and motor axonal excitability measures, including recovery cycle, threshold electrotonus, strength–duration time constant, and current–threshold relationship, did not show differences between participants with painful and painless diabetic polyneuropathy, and there were only minor changes for chemotherapy-induced polyneuropathy. Interpretation: Axonal excitability did not significantly differ between painful and painless diabetic or chemotherapy-induced polyneuropathy in a multicenter observational study. Threshold tracking assesses the excitability of myelinated axons; the majority of nociceptors are unmyelinated, and although there is some overlap of the "channelome" between these axonal populations, our results suggest that alternative measures such as microneurography are required to understand the relationship between sensory neuron excitability and neuropathic pain. ANN NEUROL 2022;91:506–520.
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- 2022
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165. Searching Trajectories by Regions of Interest.
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Shuo Shang, Lisi Chen, Christian S. Jensen, Ji-Rong Wen, and Panos Kalnis
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- 2018
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166. VIPTRA: Visualization and Interactive Processing on Big Trajectory Data.
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Xin Ding 0002, Rui Chen, Lu Chen 0001, Yunjun Gao, and Christian S. Jensen
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- 2018
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167. Evaluating cost benefits of combination therapies for advanced melanoma
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Ivar S Jensen, Emily Zacherle, Christopher M Blanchette, Jie Zhang, and Wes Yin
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metastatic melanoma ,BRAF V600E mutation-positive ,cost-benefit model ,targeted therapy ,immunotherapy ,dabrafenib ,trametinib ,combination therapy ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Background: Although a number of monoimmunotherapies and targeted therapies are available to treat BRAF+ advanced melanoma, response rates remain relatively low in the range of 22–53% with progression-free survival (PFS) in the range of 4.8–8.8 months. Recently, combination targeted therapies have improved response rates to about 66–69%, PFS to 11.0–12.6 months and overall survival (OS) to 25.1–25.6 months. While combination immunotherapies have improved response rates of 67 compared with 19–29% with monotherapies and improved PFS of 11.7 compared with 4.4–5.8 months with monotherapies, the OS benefit is yet to be established in phase 3 trials. As healthcare costs continue to rise, US payers have a predominant interest in assessing the value of available treatments. Therefore, a cost-benefit model was developed to evaluate the value of treating BRAF+ advanced melanoma with two combination therapies: nivolumab + ipilimumab (N+I) and dabrafenib + trametinib (D+T). Scope: The model was used to estimate total costs, total costs by expenditure category, cost per month of PFS and cost per responder for the payer, and societal perspectives of treating advanced melanoma patients with the BRAF V600 mutation using combination targeted therapy (D+T) or combination immunotherapy (N+I). The model followed patients from initiation of treatment to the point of progression or death. Deterministic and probabilistic sensitivity analyses were conducted to evaluate the robustness of the results and to understand the dispersion of simulated results. Findings: Based on a hypothetical payer with one million covered lives, it was expected that fourteen metastatic melanoma patients with the BRAF V600 mutation would be treated each year. Cost-benefit with N+I and D+T was simulated from the payer perspective. The cost per month of PFS for N+I was $22,162, while that for D+T was $17,716 (–$4,446 cost difference); the cost per responder for N+I was $388,746 and that for D+T was $282,429 (–$106,316 cost difference). The cost per month of PFS and per responder from the societal perspective resembled the patterns observed from the payer’s perspective: the cost per month of PFS for N+I was $22,843, while that for D+T was $18,283 (–$4,560 cost difference). The cost per responder for N+I was $400,695 and that for D+T was $291,473 (–$109,222 cost difference). The totals of travel and treatment time for N+I and D+T were 58 hours and 3.9 hours per patient, respectively, of which total infusion time for N+I accounted for a majority – 59% – of the 58 hours. Sensitivity analyses indicated that results were most sensitive to model inputs for median PFS, body weight, and drug cost. Moreover, D+T is likely associated with a lower cost per month of PFS and cost per responder than N+I, except at low body weights (less than 57 kg). Conclusion: The model presented in this study was used to analyze the clinical and economic benefit of using combination therapies in advanced melanoma patients with the BRAF V600 mutation. This analysis suggests D+T therapy is associated with less patient time and lower costs relative to N+I to gain similar PFS and overall response rate (ORR) benefits.
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- 2016
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168. Variable Patterns of Remission From ADHD in the Multimodal Treatment Study of ADHD
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Jeffrey H. Newcorn, Traci M. Kennedy, Peter S. Jensen, Elizabeth B. Owens, James M. Swanson, Stephen P. Hinshaw, Luis Augusto Paim Rohde, Arunima Roy, L. Eugene Arnold, Margaret H. Sibley, Brooke S. G. Molina, Andrea Chronis-Tuscano, and Lily Hechtman
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Adult ,Parents ,medicine.medical_specialty ,Substance-Related Disorders ,business.industry ,Audiology ,medicine.disease ,Combined Modality Therapy ,behavioral disciplines and activities ,Article ,Young Adult ,Psychiatry and Mental health ,Attention Deficit Disorder with Hyperactivity ,Neurodevelopmental Disorders ,mental disorders ,Humans ,Medicine ,Multimodal treatment ,Attention deficit hyperactivity disorder ,Child ,business - Abstract
OBJECTIVE: It is estimated that childhood ADHD remits by adulthood in approximately 50% of cases; however, this conclusion is typically based on single endpoints, failing to consider longitudinal patterns of ADHD expression. We investigated the extent to which children with ADHD experience recovery and variable patterns of remission by adulthood. METHOD: Children with ADHD (N=558) in the Multimodal Treatment Study of ADHD (MTA) were administered eight assessments from 2-year (M age=10.44) to 16-year follow-up (M age=25.12). We identified participants with fully remitted, partially remitted, and persistent ADHD at each timepoint based on parent, teacher, and self-reports of ADHD symptoms and impairment, treatment utilization, and substance use and mental disorders. Longitudinal patterns of remission and persistence were identified that considered context and timing. RESULTS: Approximately 30% of children with ADHD experienced full remission at some point during the 14-year follow-up period; however, a majority (60% of these) experienced recurrence of ADHD after the initial period of remission. Only 9.1% of the sample demonstrated recovery (sustained remission) by study endpoint and only 10.8% demonstrated stable ADHD persistence across study timepoints. Instead, most participants with ADHD (63.8%) had fluctuating periods of remission and recurrence over time. CONCLUSIONS: The MTA findings challenge the notion that approximately 50% of children with ADHD outgrow the disorder by adulthood. Most cases demonstrated fluctuating symptoms between childhood and young adulthood. Although intermittent periods of remission can be expected in most cases, 90% of children with ADHD continued to struggle with residual ADHD through young adulthood. Clinical Trial Number: NCT00000388, Multimodal Treatment Study of Children with Attention Deficit and Hyperactivity Disorder (MTA). https://clinicaltrials.gov/ct2/show/NCT00000388
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- 2022
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169. Molecular Engineering of Efficacious Mono-Valent Ultra-Long Acting Two-Chain Insulin-Fc Conjugates
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Tina M. Tagmose, Karen-Margrethe Pedersen, Lone Pridal, Carsten E. Stidsen, Marie Ø. Pedersen, Zhaosheng Lin, Yuanyuan Zhang, Zhe Wan, Mercedes Ferreras, Helle Naver, Peter K. Nielsen, Zheng Cao, Yi Wang, Lennart Lykke, Josefine L. Christensen, Victoria S. Jensen, Valentina Manfè, Thomas Å. Pedersen, Eva Johansson, Peter Madsen, János T. Kodra, Martin Münzel, Leonardo De Maria, Erica Nishimura, and Thomas B. Kjeldsen
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Male ,Immunoconjugates ,Mesocricetus ,Protein Engineering ,Cell Line ,Diabetes Mellitus, Experimental ,Immunoglobulin Fc Fragments ,Insulin, Long-Acting ,Rats, Sprague-Dawley ,Drug Discovery ,Animals ,Humans ,Hypoglycemic Agents ,Molecular Medicine ,Amino Acid Sequence - Abstract
Here, we describe molecular engineering of monovalent ultra-long acting two-chain insulin-Fc conjugates. Insulin-Fc conjugates were synthesized using trifunctional linkers with one amino reactive group for reaction with a lysine residue of insulin and two thiol reactive groups used for re-bridging of a disulfide bond within the Fc molecule. The ultra-long pharmacokinetic profile of the insulin-Fc conjugates was the result of concertedly slowing insulin receptor-mediated clearance by (1) introduction of amino acid substitutions that lowered the insulin receptor affinity and (2) conjugating insulin to the Fc element. Fc conjugation leads to recycling by the neonatal Fc receptor and increase in the molecular size, both contributing to the ultra-long pharmacokinetic and pharmacodynamic profiles.
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- 2022
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170. Combination Therapy for Mycoplasma genitalium, and New Insights Into the Utility of parC Mutant Detection to Improve Cure
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Lenka A Vodstrcil, Erica L Plummer, Michelle Doyle, Gerald L Murray, Kaveesha Bodiyabadu, Jorgen S Jensen, David Whiley, Emma Sweeney, Deborah A Williamson, Eric P F Chow, Christopher K Fairley, and Catriona S Bradshaw
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Microbiology (medical) ,Infectious Diseases ,Doxycycline ,Drug Resistance, Bacterial ,Moxifloxacin ,Humans ,Mycoplasma Infections ,Mycoplasma genitalium ,Macrolides ,Azithromycin ,bacterial infections and mycoses ,Anti-Bacterial Agents - Abstract
Background Mycoplasma genitalium (MG) infection is challenging to cure because of rising antimicrobial resistance and limited treatment options. Methods This was a prospective evaluation of the efficacy and tolerability of resistance-guided combination antimicrobial therapy for MG treatment at Melbourne Sexual Health Centre (August 2019–December 2020). All patients received 7 days of doxycycline before combination therapy based on the macrolide-resistant profile. Macrolide-susceptible infections received combination doxycycline + azithromycin (1 g, day 1; 500 mg, days 2–4) and macrolide-resistant infections combination doxycycline + moxifloxacin (400 mg daily for 7 days). Adherence and adverse effects were recorded at test-of-cure, recommended 14–28 days after antimicrobial completion. Sequencing was performed to determine the prevalence of single nucleotide polymorphisms (SNPs) in the parC gene and their association with moxifloxacin treatment outcomes in macrolide-resistant infections. Results Of 100 patients with macrolide-susceptible MG treated with doxycycline + azithromycin, 93 were cured (93.0%; 95% confidence interval [CI], 86.1–97.1). Of 247 patients with macrolide-resistant MG receiving doxycycline + moxifloxacin, 210 were cured (85.0%; 95% CI, 80.0–89.2). parC sequencing was available for 164 (66%) macrolide-resistant infections; 29% had SNPs at parC S83 or D87 (23% S83I). The absence of SNPs at parC S83/D87 was associated with 98.3% cure (95% CI, 93.9–99.8) following doxycycline + moxifloxacin. The presence of the parC S83I-SNP was associated with failure in 62.5% (95% CI, 45.8–77.3). Side effects were common (40%–46%) and predominantly mild and gastrointestinal. Conclusions Combination doxycycline + azithromycin achieved high cure for macrolide-susceptible infections. However, in the context of a high prevalence of the parC S83I mutation (23%) in macrolide-resistant infections, doxycycline + moxifloxacin cured only 85%. Infections that were wild-type for S83/D87 experienced high cure following doxycycline + moxifloxacin, supporting the use of a parC-resistance/susceptibility testing strategy in clinical care.
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- 2022
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171. Profit Optimization in Spatial Crowdsourcing: Effectiveness and Efficiency
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Yan Zhao, Kai Zheng, Yunchuan Li, Jinfu Xia, Bin Yang, Torben Bach Pedersen, Rui Mao, Christian S. Jensen, and Xiaofang Zhou
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Behavioral sciences ,Optimization ,Computational Theory and Mathematics ,spatial crowdsourcing ,Task analysis ,Crowdsourcing ,Profit ,Computational modeling ,task assignment ,Pricing ,Costs ,Computer Science Applications ,Information Systems - Abstract
In Spatial crowdsourcing, mobile users perform spatio-temporal tasks that involve travel to specified locations. Spatial crowdsourcing (SC) is enabled by SC platforms that support mobile worker recruitment and retention, as well as task assignment, which is essential to maximize profits that are accrued from serving task requests. Specifically, how to best achieve task assignment in a cost-effective manner while contending with spatio-temporal constraints is a key challenge in SC. To address this challenge, we formalize and study a novel Profit-driven Task Assignment problem. We first establish a task reward pricing model that takes into account the temporal constraints (i.e., expected completion time and deadline) of tasks. Then we adopt an optimal algorithm based on tree decomposition to achieve an optimal task assignment and propose greedy algorithms based on Random Tuning Optimization to improve the computational efficiency. To balance effectiveness and efficiency, we also provide a heuristic task assignment algorithm based on Ant Colony Optimization that assigns tasks by simulating behavior of ant colonies foraging for food. Finally, we conduct extensive experiments using real and synthetic data, offering detailed insight into effectiveness and efficiency of the proposed methods.
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- 2022
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172. Quantifying country-to-global scale nitrogen fixation for grain legumes II. Coefficients, templates and estimates for soybean, groundnut and pulses
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David F. Herridge, Ken E. Giller, Erik S. Jensen, and Mark B. Peoples
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global estimates ,templates ,regional ,legumes ,Soil Science ,Plant Science ,PE&RC ,rhizobia ,Plant Production Systems ,Nitrogen fixation ,Plantaardige Productiesystemen ,pulses ,soybean ,oilseed legumes - Abstract
Background: The demand for estimates of biological nitrogen (N) fixation inputs in agricultural systems is driven by the need to effectively manage the global N cycle. Scope: We present a methodology for quantifying N2 fixation by the grain legume-rhizobia symbioses that can be used for any year or sequence of years for which area and production statistics for legume oilseed and pulse crops were available and at country-to-global scales. The coefficients used in the templates – harvest index, N harvest index, %N shoots, %N grain and a factor to account for below-ground N – were aggregated from 224 reports containing > 4,000 observations. Values for the % total crop N derived from atmospheric N2 (%Ndfa) for specific grain legumes and regions were determined in a companion paper. The grain legumes were estimated to fix a global total of 35.5 Tg N in the year 2018 - 25.0 Tg for soybean (Glycine max), 7.2 Tg for the pulses and 3.3 Tg for groundnut (Arachis hypogaea). Soybean dominated global grain legume N2 fixation, with 38 % of total N fixed associated with soybean in South and Central America and a further 22 % by soybean in North America. Conclusions: The updated estimates of N2 fixation by the grain legumes inform us of a substantial and increasing role that biological N2 fixation plays in global agricultural systems. The challenge remains to reliably estimate N inputs from other N2-fixing organisms that are active in these systems.
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- 2022
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173. Telomerase reverse transcriptase (TERT)-expressing cells mark a novel stem cell population in the adult mouse brain
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Gabriel S. Jensen, Ashleigh N. Beaulieu, Caroline D. Curtis, Joshua Passarelli, Magdalena Blaszkiewicz, Seth Thomas, Trevor Morin, Jake W. Willows, Callie W. Greco, Ciara J. Brennan, Christopher Aniapam, Lydia Caron, Michele J. Alves, Matthew D. Lynes, Diana L. Carlone, David T. Breault, and Kristy L. Townsend
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Telomerase reverse transcriptase (TERT) is expressed by quiescent adult stem cells (ASC) in numerous adult murine and human tissues, but has never been explored in the adult brain. Here, we demonstrate that TERT+ cells in the adult mouse brain represent a novel population of multipotent ASCs that are localized to numerous classical neuro/gliogenic niches (including the ventricular-subventricular zone, hypothalamus, and olfactory bulb), as well as more recently described regions of adult brain plasticity such as the meninges and choroid plexus. Using a direct-reporter mouse line, we found that TERT+ cells expressed known neural stem cell markers such as Nestin and Sox2, but not markers of committed stem/progenitor cells, nor markers of mature neuronal or glial cells. TERT+ ASCs rarely expressed the proliferation marker Ki67, andin vitroTERT+ cells lost TERT expression when activated by growth factors, together indicating a quiescent phenotype similar to what has been observed in other tissues. When cultured, TERT+ cells behaved like neural stem cells by forming neurospheres, which could proliferate and become more metabolically active once stimulated by growth factors. TERT+ cells were observed in numerous brain niches, particularly near the ventricles and cerebrospinal fluid barriers, but notably, TERT+ cells were never observed in the hippocampus. Lineage tracing of TERT+ cells in adult transgenic mice (mTERTrtTA::oTET-Cre::RosamTmG) revealed large-scale expansion of TERT+ progeny and differentiation to diverse cell types in multiple brain regions. For example, lineage-traced cells expressed markers of mature neurons, oligodendrocytes, astrocytes, ependymal cells, and choroid epithelial cells, thus demonstrating the striking multipotency of this stem cell population in basal tissue turnover of the adult brain. Together, these data demonstrate that TERT+ cells represent a novel population of multipotent stem cells that contribute to basal plasticity and regeneration in the adult mouse brain.Graphical Abstract
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- 2023
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174. Approaches to foresight recreation and tourism in nature
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Peter Fredman, Tuija Sievänen, Frank S. Jensen, Vegard Gundersen, Sandra Wall-Reinius, Maria Lexhagen, Christine Lundberg, Klas Sandell, Odd Inge Vistad, and Daniel Wolf-Watz
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- 2023
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175. T-cell derived extracellular vesicles prime macrophages for improved STING based cancer immunotherapy
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Aida S. Hansen, Lea S. Jensen, Kristoffer G. Ryttersgaard, Christian Krapp, Jesper Just, Kristine R. Gammelgaard, Kasper L. Jønsson, Mogens Johansen, Anders Etzerodt, Bent W. Deleuran, and Martin R. Jakobsen
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SummaryA key phenomenon in cancer is the establishment of a highly immunosuppressive tumor microenvironment (TME). Despite advances in immunotherapy, where the purpose is to induce tumor recognition and hence hereof tumor eradication, the majority of patients applicable for such treatment still fail to respond. It has been suggested that high immunological activity in the tumor is essential for achieving effective response to immunotherapy, which therefore have led to exploration of strategies that triggers inflammatory pathways. Here activation of the stimulator of interferon genes (STING) signaling pathway has been considered an attractive target, as it is a potent trigger of pro-inflammatory cytokines and type I and III interferons. However, immunotherapy combined with targeted STING agonists has not yielded sustained clinical remission in humans. This suggest a need for exploring novel adjuvants to improve the innate immunological efficacy. Here, we demonstrate that extracellular vesicles (EVs), derived from activated CD4+T cells (T-EVs), sensitizes macrophages to elevate STING activation, mediated by IFNγ carried on the T-EVs. Our work support that T-EVs can disrupt the immune suppressive environment in the tumor by reprogramming macrophages to a pro-inflammatory phenotype, and priming them for a robust immune response towards STING activation.
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- 2023
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176. The perinatal health challenges of emerging and re-emerging infectious diseases:A narrative review
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Veronica N. E. Malange, Gitte Hedermann, Ulrik Lausten-Thomsen, Steen Hoffmann, Marianne Voldstedlund, Anna J. M. Aabakke, Anna K. Eltvedt, Jørgen S. Jensen, Morten Breindahl, Lone Krebs, Michael Christiansen, and Paula L. Hedley
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History ,Polymers and Plastics ,Zika Virus Infection ,Public Health, Environmental and Occupational Health ,Infant, Newborn ,Infant ,Communicable Diseases, Emerging/epidemiology ,Zika Virus ,Infant, Low Birth Weight ,Industrial and Manufacturing Engineering ,Premature Birth/epidemiology ,Pregnancy ,Influenza, Human ,Humans ,Female ,Business and International Management ,COVID-19/epidemiology - Abstract
The world has seen numerous infectious disease outbreaks in the past decade. In many cases these outbreaks have had considerable perinatal health consequences including increased risk of preterm delivery (e.g., influenza, measles, and COVID-19), and the delivery of low birth weight or small for gestational age babies (e.g., influenza, COVID-19). Furthermore, severe perinatal outcomes including perinatal and infant death are a known consequence of multiple infectious diseases (e.g., Ebola virus disease, Zika virus disease, pertussis, and measles). In addition to vaccination during pregnancy (where possible), pregnant women, are provided some level of protection from the adverse effects of infection through community-level application of evidence-based transmission-control methods. This review demonstrates that it takes almost 2 years for the perinatal impacts of an infectious disease outbreak to be reported. However, many infectious disease outbreaks between 2010 and 2020 have no associated pregnancy data reported in the scientific literature, or pregnancy data is reported in the form of case-studies only. This lack of systematic data collection and reporting has a negative impact on our understanding of these diseases and the implications they may have for pregnant women and their unborn infants. Monitoring perinatal health is an essential aspect of national and global healthcare strategies as perinatal life has a critical impact on early life mortality as well as possible effects on later life health. The unpredictable nature of emerging infections and the potential for adverse perinatal outcomes necessitate that we thoroughly assess pregnancy and perinatal health implications of disease outbreaks and their public health interventions in tandem with outbreak response efforts. Disease surveillance programs should incorporate perinatal health monitoring and health systems around the world should endeavor to continuously collect perinatal health data in order to quickly update pregnancy care protocols as needed.
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- 2023
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177. Tuning of Efimov states in non-integer dimensions
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Eduardo Garrido and Aksel S. Jensen
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Nuclear Theory (nucl-th) ,Quantum Physics ,Nuclear Theory ,Atomic Physics (physics.atom-ph) ,FOS: Physical sciences ,Quantum Physics (quant-ph) ,Atomic and Molecular Physics, and Optics ,Physics - Atomic Physics - Abstract
The purpose of this paper is to show that, by combining Feshbach resonances with external confining potentials, the energy scale factor of neighboring Efimov states can be tremendously reduced. The Efimov conditions can be reached for systems made of three different particles. For the case of two identical light particles and a heavy particle the energy factor can be reduced by many orders of magnitude, and the Efimov states are in this way more easily reachable experimentally. The equivalence between external potentials and the formulation in terms of non-integer dimensions, $d$, is exploited. The technically simpler $d$-method is used to derive analytic expressions for two-component relative wave functions describing two short-range square-well interacting particles. The two components express one open and one closed channel. The scattering length is obtained after phase shift expansion, providing an analytic form for the Efimov condition. We illustrate the results by means of systems made of $^7$Li, $^{39}$K, and $^{87}$Rb, with realistic parameters. The related pairs of dimension and magnetic field are shown and discussed. The results are universal as they only rely on large-distance properties., Comment: To be published in the European Physical Journal D
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- 2023
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178. First-in-human use of a modular capsid virus-like vaccine platform:An open-label, non-randomised, phase 1 clinical trial of the SARS-CoV-2 vaccine ABNCoV2
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Merel J Smit, Adam F Sander, Maud B P A Ariaans, Cyrielle Fougeroux, Constanze Heinzel, Rolf Fendel, Meral Esen, Peter G Kremsner, Rob ter Heine, Heiman F Wertheim, Manja Idorn, Søren Riis Paludan, Alexander P Underwood, Alekxander Binderup, Santseharay Ramirez, Jens Bukh, Max Soegaard, Sayit M Erdogan, Tobias Gustavsson, Stine Clemmensen, Thor G Theander, Ali Salanti, Mette Hamborg, Willem A de Jongh, Matthew B B McCall, Morten A Nielsen, Benjamin G Mordmüller, Robert Dagil, Louise Goksøyr, Thomas M Hulen, Christoph Janitzek, Daniel S Jensen, Sune Justesen, Paul K Khalifé, Andrea Kreidenweiss, Telma Lança, Olivia Lie-Andersen, Karina Teelen, and Elena Vidal-Calvo
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Microbiology (medical) ,COVID-19 Vaccines ,SARS-CoV-2 ,lnfectious Diseases and Global Health Radboud Institute for Molecular Life Sciences [Radboudumc 4] ,Viral Vaccines/adverse effects ,COVID-19 ,Microbiology ,All institutes and research themes of the Radboud University Medical Center ,lnfectious Diseases and Global Health Radboud Institute for Health Sciences [Radboudumc 4] ,Infectious Diseases ,Capsid ,Adjuvants, Immunologic ,Virology ,Humans ,Capsid Proteins - Abstract
Contains fulltext : 291067.pdf (Publisher’s version ) (Open Access) BACKGROUND: Capsid virus-like particles (cVLP) have proven safe and immunogenic and can be a versatile platform to counter pandemics. We aimed to clinically test a modular cVLP COVID-19 vaccine in individuals who were naive to SARS-CoV-2. METHODS: In this phase 1, single-centre, dose-escalation, adjuvant-selection, open-label clinical trial, we recruited participants at the Radboud University Medical Center in Nijmegen, Netherlands, and sequentially assigned them to seven groups. Eligible participants were healthy, aged 18-55 years, and tested negative for SARS-CoV-2 and anti-SARS-CoV-2 antibodies. Participants were vaccinated intramuscularly on days 0 and 28 with 6 μg, 12 μg, 25 μg, 50 μg, or 70 μg of the cVLP-based COVID-19 vaccine (ABNCoV2). A subgroup received MF59-adjuvanted ABNCoV2. Follow-up was for 24 weeks after second vaccination. The primary objectives were to assess the safety and tolerability of ABNCoV2 and to identify a dose that optimises the tolerability-immunogenicity ratio 14 days after the first vaccination. The primary safety endpoint was the number of related grade 3 adverse events and serious adverse events in the intention-to-treat population. The primary immunogenicity endpoint was the concentration of ABNCoV2-specific antibodies. The trial is registered with ClinicalTrials.gov, NCT04839146. FINDINGS: 45 participants (six to nine per group) were enrolled between March 15 and July 15, 2021. Participants had a total of 249 at least possibly related solicited adverse events (185 grade 1, 63 grade 2, and one grade 3) within a week after vaccination. Two serious adverse events occurred; one was classified as a possible adverse reaction. Antibody titres were dose-dependent with levels plateauing at a vaccination dose of 25-70 μg ABNCoV2. After second vaccination, live virus neutralisation activity against major SARS-CoV-2 variants was high but was lower with an omicron (BA.1) variant. Vaccine-specific IFNγ(+) CD4(+) T cells were induced. INTERPRETATION: Immunisation with ABNCoV2 was well tolerated, safe, and resulted in a functional immune response. The data support the need for additional clinical development of ABNCoV2 as a second-generation SARS-CoV-2 vaccine. The modular cVLP platform will accelerate vaccine development, beyond SARS-CoV-2. FUNDING: EU, Carlsberg Foundation, and the Novo Nordisk Foundation.
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- 2023
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179. Rejuvenating infall: a crucial yet overlooked source of mass and angular momentum
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Michael Kuffmeier, Sigurd S. Jensen, and Troels Haugbølle
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Fluid Flow and Transfer Processes ,Astrophysics - Solar and Stellar Astrophysics ,ADAPTIVE MESH REFINEMENT ,Astrophysics of Galaxies (astro-ph.GA) ,General Physics and Astronomy ,FOS: Physical sciences ,ACCRETION ,Astrophysics - Astrophysics of Galaxies ,EVOLUTION ,Solar and Stellar Astrophysics (astro-ph.SR) - Abstract
MHD models and the observation of accretion streamers confirmed that protostars can undergo late accretion events after the initial collapse phase. To provide better constraints, we study the evolution of stellar masses in MHD simulations of a (4 pc)^3 molecular cloud. Tracer particles allow us to accurately follow the trajectory of accreting material for all protostars and thereby constrain the accretion reservoir of the stars. The diversity of the accretion process implies that stars in the solar mass regime can have vastly different accretion histories. Some stars accrete most of their mass during the initial collapse phase, while others gain >50 % of their final mass from late infall. The angular momentum budget of stars that experience substantial infall, so-called late accretors, is significantly higher than for stars without or with only little late accretion. As the probability of late infall increases with increasing final stellar mass, the specific angular momentum budget of higher mass stars is on average higher. The hypothetical centrifugal radius computed from the accreting particles at the time of formation is orders of magnitude higher than observed disk sizes, which emphasizes the importance of angular momentum transport during disk formation. Nevertheless, we find a correlation that the centrifugal radius is highest for stars with substantial infall, which suggests that very large disks are the result of recent infall events. There are also indications for a subtle trend of increasing centrifugal radius with increasing final stellar mass, which is in agreement with an observed marginal correlation of disk size and stellar mass. Finally, we show that late accretors become embedded again during infall. As a consequence, late accretors are (apparently) rejuvenated and would be classified as Class 0 objects according to their bolometric temperature despite being 1 Myr old., 18 pages, 7 figures, accepted invited paper for EpJ Plus Focus Point on Environmental and multiplicity effects on planet formation
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- 2023
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180. Indexing Metric Spaces for Exact Similarity Search
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Lu Chen, Yunjun Gao, Xuan Song, Zheng Li, Yifan Zhu, Xiaoye Miao, and Christian S. Jensen
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FOS: Computer and information sciences ,indexing and querying ,Metric spaces ,metric similarity search ,General Computer Science ,Computer Science - Databases ,Databases (cs.DB) ,Theoretical Computer Science - Abstract
With the continued digitization of societal processes, we are seeing an explosion in available data. This is referred to as big data. In a research setting, three aspects of the data are often viewed as the main sources of challenges when attempting to enable value creation from big data: volume, velocity, and variety. Many studies address volume or velocity, while fewer studies concern the variety. Metric spaces are ideal for addressing variety because they can accommodate any data as long as it can be equipped with a distance notion that satisfies the triangle inequality. To accelerate search in metric spaces, a collection of indexing techniques for metric data have been proposed. However, existing surveys offer limited coverage, and a comprehensive empirical study exists has yet to be reported. We offer a comprehensive survey of existing metric indexes that support exact similarity search: we summarize existing partitioning, pruning, and validation techniques used by metric indexes to support exact similarity search; we provide the time and space complexity analyses of index construction; and we offer an empirical comparison of their query processing performance. Empirical studies are important when evaluating metric indexing performance, because performance can depend highly on the effectiveness of available pruning and validation as well as on the data distribution, which means that complexity analyses often offer limited insights. This article aims at revealing strengths and weaknesses of different indexing techniques to offer guidance on selecting an appropriate indexing technique for a given setting, and to provide directions for future research on metric indexing.
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- 2022
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181. Effects of magnesium, phosphate, or zinc supplementation in ICU patients - a systematic review and meta-analysis
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Gitte K, Vesterlund, Thomas S, Jensen, Karen L, Ellekjaer, Morten H, Møller, Thordis, Thomsen, and Anders, Perner
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Low serum levels of magnesium, phosphate, and zinc are observed in many intensive care unit (ICU) patients, but clinical equipoise exists regarding supplementation strategies. We aimed to assess the desirable and undesirable effects of supplementation with magnesium, phosphate, or zinc in adult ICU patients.We conducted a systematic review with meta-analysis of randomised clinical trials assessing the effects of supplementation with magnesium, phosphate, or zinc in adult ICU patients. Primary outcomes were mortality and duration of mechanical ventilation. We registered the protocol, followed the Preferred Reporting Items for Systematic Review and Meta-Analysis (PRISMA) statement, used the Cochrane risk of bias 2 tool, and the Grading of Recommendations, Assessment, Development and Evaluation (GRADE) approach for assessing the certainty of the evidence.We identified no low risk of bias trials. For magnesium supplementation, we included three trials (n=235); the relative risk (RR) for mortality was 0.54, 95% confidence interval (CI) 0.30 to 0.96 compared to no supplementation (very low certainty of evidence). For zinc supplementation, two trials were included (n=168); the RR for mortality was 0.73, 95% CI 0.41 to 1.28 compared to control. No trials assessed the effects of phosphate supplementation on mortality. For outcomes other than mortality, only zero or one trial was available.In adult ICU patients, the certainty of evidence for the effects of supplementation with magnesium, phosphate, or zinc was very low. High quality trials are needed to assess the value of supplementation strategies in these patients. This article is protected by copyright. All rights reserved.
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- 2022
182. Determination of Loline Alkaloids and Mycelial Biomass in Endophyte-Infected Schedonorus pratensis by Near-Infrared Spectroscopy and Chemometrics
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Giovanni Cagnano, Beatriz R. Vázquez-de-Aldana, Torben Asp, Niels Roulund, Christian S. Jensen, and Milton Carlos Soto-Barajas
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Epichloë ,fungal endophytes ,meadow fescue ,NIRS ,chemometrics ,Biology (General) ,QH301-705.5 - Abstract
Near infrared spectroscopy (NIRS) is an accurate, fast and nondestructive technique whose use in predicting forage quality has become increasingly relevant in recent decades. Epichloë-infected grass varieties are commonly used in areas with high pest pressure due to their better performances compared to endophyte-free varieties. The insect resistance of Epichloë-infected grasses has been associated with four main groups of endophyte secondary metabolites: ergot alkaloids, indole-diterpenes, lolines and peramine. Concentrations of these alkaloids are usually measured with high performance liquid chromatography or gas chromatography analysis, which are accurate methods but relatively expensive and laborious. In this paper, we developed a rapid method based on NIRS to detect and quantify loline alkaloids in wild accessions of Schedonorus pratensis infected with the fungal endophyte Epichloë uncinata. The quantitative NIR equations obtained by modified partial least squares algorithm had coefficients of correlation of 0.90, 0.78, 0.85, 0.90 for N-acetylloline, N-acetylnorloline and N-formylloline and the sum of the three, respectively. The acquired NIR spectra were also used for developing an equation to predict in planta fungal biomass with a coefficient of correlation of 0.75. These results showed that the use of NIRS and chemometrics allows the quantification of loline alkaloids and mycelial biomass in a heterogeneous set of endophyte-infected meadow fescue samples.
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- 2020
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183. Predictive Value of Precision-Cut Kidney Slices as an Ex Vivo Screening Platform for Therapeutics in Human Renal Fibrosis
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Emilia Bigaeva, Nataly Puerta Cavanzo, Elisabeth G. D. Stribos, Amos J. de Jong, Carin Biel, Henricus A. M. Mutsaers, Michael S. Jensen, Rikke Nørregaard, Anna M. Leliveld, Igle J. de Jong, Jan-Luuk Hillebrands, Harry van Goor, Miriam Boersema, Ruud A. Bank, and Peter Olinga
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renal fibrosis ,precision-cut kidney slices ,antifibrotic drugs ,pirfenidone ,galunisertib ,imatinib ,Pharmacy and materia medica ,RS1-441 - Abstract
Animal models are a valuable tool in preclinical research. However, limited predictivity of human biological responses in the conventional models has stimulated the search for reliable preclinical tools that show translational robustness. Here, we used precision-cut kidney slices (PCKS) as a model of renal fibrosis and investigated its predictive capacity for screening the effects of anti-fibrotics. Murine and human PCKS were exposed to TGFβ or PDGF pathway inhibitors with established anti-fibrotic efficacy. For each treatment modality, we evaluated whether it affected: (1) culture-induced collagen type I gene expression and interstitial accumulation; (2) expression of markers of TGFβ and PDGF signaling; and (3) expression of inflammatory markers. We summarized the outcomes of published in vivo animal and human studies testing the three inhibitors in renal fibrosis, and drew a parallel to the PCKS data. We showed that the responses of murine PCKS to anti-fibrotics highly corresponded with the known in vivo responses observed in various animal models of renal fibrosis. Moreover, our results suggested that human PCKS can be used to predict drug efficacy in clinical trials. In conclusion, our study demonstrated that the PCKS model is a powerful predictive tool for ex vivo screening of putative drugs for renal fibrosis.
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- 2020
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184. Towards context-aware search and analysis on social media data.
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Leon Derczynski, Bin Yang 0002, and Christian S. Jensen
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- 2013
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185. iPark: identifying parking spaces from trajectories.
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Bin Yang 0002, Nicolas Fantini, and Christian S. Jensen
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- 2013
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186. Spatial keyword querying of geo-tagged web content.
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Christian S. Jensen
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- 2013
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187. Towards fully organic indoor positioning.
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Laura Radaelli and Christian S. Jensen
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- 2013
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188. Trajectory based optimal segment computation in road network databases.
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Xiaohui Li 0002, Vaida Ceikute, Christian S. Jensen, and Kian-Lee Tan
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- 2013
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189. Building Accurate 3D Spatial Networks to Enable Next Generation Intelligent Transportation Systems.
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Manohar Kaul, Bin Yang 0002, and Christian S. Jensen
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- 2013
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190. Identifying Typical Movements among Indoor Objects - Concepts and Empirical Study.
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Laura Radaelli, Dovydas Sabonis, Hua Lu 0001, and Christian S. Jensen
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- 2013
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191. Routing Service Quality - Local Driver Behavior Versus Routing Services.
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Vaida Ceikute and Christian S. Jensen
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- 2013
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192. Hybrid Indoor Positioning with Wi-Fi and Bluetooth: Architecture and Performance.
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Artur Baniukevic, Christian S. Jensen, and Hua Lu 0001
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- 2013
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193. Recognising and Interpreting Named Temporal Expressions.
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Matteo Brucato, Leon Derczynski, Hector Llorens, Kalina Bontcheva, and Christian S. Jensen
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- 2013
194. Genomic Prediction in Tetraploid Ryegrass Using Allele Frequencies Based on Genotyping by Sequencing
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Xiangyu Guo, Fabio Cericola, Dario Fè, Morten G. Pedersen, Ingo Lenk, Christian S. Jensen, Just Jensen, and Lucas L. Janss
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ryegrass ,tetraploid ,genomic prediction ,genotyping-by-sequencing ,sequencing depth ,Plant culture ,SB1-1110 - Abstract
Perennial ryegrass is an outbreeding forage species and is one of the most widely used forage grasses in temperate regions. The aim of this study was to investigate the possibility of implementing genomic prediction in tetraploid perennial ryegrass, to study the effects of different sequencing depth when using genotyping-by-sequencing (GBS), and to determine optimal number of single-nucleotide polymorphism (SNP) markers and sequencing depth for GBS data when applied in tetraploids. A total of 1,515 F2 tetraploid ryegrass families were included in the study and phenotypes and genotypes were scored on family-pools. The traits considered were dry matter yield (DM), rust resistance (RUST), and heading date (HD). The genomic information was obtained in the form of allele frequencies of pooled family samples using GBS. Different SNP filtering strategies were designed. The strategies included filtering out SNPs having low average depth (FILTLOW), having high average depth (FILTHIGH), and having both low average and high average depth (FILTBOTH). In addition, SNPs were kept randomly with different data sizes (RAN). The accuracy of genomic prediction was evaluated by using a “leave single F2 family out” cross validation scheme, and the predictive ability and bias were assessed by correlating phenotypes corrected for fixed effects with predicted additive breeding values. Among all the filtering scenarios, the highest estimates for genomic heritability of family means were 0.45, 0.74, and 0.73 for DM, HD and RUST, respectively. The predictive ability generally increased as the number of SNPs included in the analysis increased. The highest predictive ability for DM was 0.34 (137,191 SNPs having average depth higher than 10), for HD was 0.77 (185,297 SNPs having average depth lower than 60), and for RUST was 0.55 (188,832 SNPs having average depth higher than 1). Genomic prediction can help to optimize the breeding of tetraploid ryegrass. GBS data including about 80–100 K SNPs are needed for accurate prediction of additive breeding values in tetraploid ryegrass. Using only SNPs with sequencing depth between 10 and 20 gave highest predictive ability, and showed the potential to obtain accurate prediction from medium-low coverage GBS in tetraploids.
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- 2018
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195. A comparative morphological revision of the aphid genus Myzaphis van der Goot, 1913 (Insecta: Hemiptera: Aphididae) revealed a new genus and three new species.
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Mariusz Kanturski, Shalva Barjadze, Andrew S Jensen, and Karina Wieczorek
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Medicine ,Science - Abstract
The aphid genus Myzaphis van der Goot, 1913 from the tribe Macrosiphini is revised to include eight species. Apterous and alate viviparous females, known fundatrices and known sexual morphs (oviparous females and males) of Myzaphis bucktoni, M. juchnevitschae, M. rosarum, M. tianshanica and M. turanica are re-described and illustrated. Lectotype and paralectotypes of Myzaphis bucktoni and M. turanica are designated. The status of M. komatsubarae nomen dubium is discussed. Myzaphis avariolosa is regarded as a species belonging to the genus Ericaphis. Three new species: M. oezdemirae Kanturski & Barjadze sp. nov., M. tuatayae Kanturski & Barjadze sp. nov. from Turkey and M. rezwanii Kanturski & Barjadze sp. nov. from Iran are described and illustrated. Myzaphis bucktoni is recorded from Portugal for the first time. Diagnosis of the genus Myzaphis van der Goot, 1913 is redefined and a new genus Richardsaphis Kanturski & Barjadze gen. nov. is erected with the type species R. canadensis (Richards) comb. nov. Richardsaphis is for the first time recorded from the USA and hitherto unknown oviparous female and alate male are described and illustrated. Original keys to species of the genus Myzaphis and aphid genera of the tribe Macrosiphini with 2-2-2 first tarsal chaetotaxy are also provided.
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- 2018
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196. DSM-IV-TR® Casebook and Treatment Guide for Child Mental Health
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Cathryn A. Galanter, Peter S. Jensen
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- 2016
197. Spatial Keyword Querying.
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Xin Cao 0001, Lisi Chen, Gao Cong, Christian S. Jensen, Qiang Qu, Anders Skovsgaard, Dingming Wu 0001, and Man Lung Yiu
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- 2012
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198. A Foundation for Efficient Indoor Distance-Aware Query Processing.
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Hua Lu 0001, Xin Cao 0001, and Christian S. Jensen
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- 2012
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199. Upgrading Uncompetitive Products Economically.
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Hua Lu 0001 and Christian S. Jensen
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- 2012
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200. EcoMark: evaluating models of vehicular environmental impact.
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Chenjuan Guo, Yu Ma, Bin Yang 0002, Christian S. Jensen, and Manohar Kaul
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- 2012
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