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This paper proposes the incremental Bayesian optimization algorithm (iBOA), which modifies standard BOA by removing the population of solutions and using incremental updates of the Bayesian network. iBOA is shown to be able to learn and exploit unrestricted Bayesian networks using incremental techniques for updating both the structure as well as the parameters of the probabilistic model. This represents an important step toward the design of competent incremental estimation of distribution algorithms that can solve difficult nearly decomposable problems scalably and reliably., Comment: Also available at the MEDAL web site, http://medal.cs.umsl.edu/

This study analyzes performance of several genetic and evolutionary algorithms on randomly generated NK fitness landscapes with various values of n and k. A large number of NK problem instances are first generated for each n and k, and the global optimum of each instance is obtained using the branch-and-bound algorithm. Next, the hierarchical Bayesian optimization algorithm (hBOA), the univariate marginal distribution algorithm (UMDA), and the simple genetic algorithm (GA) with uniform and two-point crossover operators are applied to all generated instances. Performance of all algorithms is then analyzed and compared, and the results are discussed., Comment: Also available at the MEDAL web site, http://medal.cs.umsl.edu/

This study focuses on the problem of finding ground states of random instances of the Sherrington-Kirkpatrick (SK) spin-glass model with Gaussian couplings. While the ground states of SK spin-glass instances can be obtained with branch and bound, the computational complexity of branch and bound yields instances of not more than about 90 spins. We describe several approaches based on the hierarchical Bayesian optimization algorithm (hBOA) to reliably identifying ground states of SK instances intractable with branch and bound, and present a broad range of empirical results on such problem instances. We argue that the proposed methodology holds a big promise for reliably solving large SK spin-glass instances to optimality with practical time complexity. The proposed approaches to identifying global optima reliably can also be applied to other problems and they can be used with many other evolutionary algorithms. Performance of hBOA is compared to that of the genetic algorithm with two common crossover operators., Comment: Also available at the MEDAL web site, http://medal.cs.umsl.edu/

The paper analyzes the scalability of multiobjective estimation of distribution algorithms (MOEDAs) on a class of boundedly-difficult additively-separable multiobjective optimization problems. The paper illustrates that even if the linkage is correctly identified, massive multimodality of the search problems can easily overwhelm the nicher and lead to exponential scale-up. Facetwise models are subsequently used to propose a growth rate of the number of differing substructures between the two objectives to avoid the niching method from being overwhelmed and lead to polynomial scalability of MOEDAs., Comment: Submitted to Genetic and Evolutionary Computation Conference, GECCO-2005

This paper describes a scalable algorithm for solving multiobjective decomposable problems by combining the hierarchical Bayesian optimization algorithm (hBOA) with the nondominated sorting genetic algorithm (NSGA-II) and clustering in the objective space. It is first argued that for good scalability, clustering or some other form of niching in the objective space is necessary and the size of each niche should be approximately equal. Multiobjective hBOA (mohBOA) is then described that combines hBOA, NSGA-II and clustering in the objective space. The algorithm mohBOA differs from the multiobjective variants of BOA and hBOA proposed in the past by including clustering in the objective space and allocating an approximately equally sized portion of the population to each cluster. The algorithm mohBOA is shown to scale up well on a number of problems on which standard multiobjective evolutionary algorithms perform poorly., Comment: Also IlliGAL Report No. 2005005 (http://www-illigal.ge.uiuc.edu/). Submitted to GECCO-2005

This paper discusses scalability of standard genetic programming (GP) and the probabilistic incremental program evolution (PIPE). To investigate the need for both effective mixing and linkage learning, two test problems are considered: ORDER problem, which is rather easy for any recombination-based GP, and TRAP or the deceptive trap problem, which requires the algorithm to learn interactions among subsets of terminals. The scalability results show that both GP and PIPE scale up polynomially with problem size on the simple ORDER problem, but they both scale up exponentially on the deceptive problem. This indicates that while standard recombination is sufficient when no interactions need to be considered, for some problems linkage learning is necessary. These results are in agreement with the lessons learned in the domain of binary-string genetic algorithms (GAs). Furthermore, the paper investigates the effects of introducing utnnecessary and irrelevant primitives on the performance of GP and PIPE., Comment: Submitted to GECCO-2005

Estimation of Distribution Algorithms have been proposed as a new paradigm for evolutionary optimization. This paper focuses on the parallelization of Estimation of Distribution Algorithms. More specifically, the paper discusses how to predict performance of parallel Mixed Bayesian Optimization Algorithm (MBOA) that is based on parallel construction of Bayesian networks with decision trees. We determine the time complexity of parallel Mixed Bayesian Optimization Algorithm and compare this complexity with experimental results obtained by solving the spin glass optimization problem. The empirical results fit well the theoretical time complexity, so the scalability and efficiency of parallel Mixed Bayesian Optimization Algorithm for unknown instances of spin glass benchmarks can be predicted. Furthermore, we derive the guidelines that can be used to design effective parallel Estimation of Distribution Algorithms with the speedup proportional to the number of variables in the problem., Comment: Optimization by Building and Using Probabilistic Models OBUPM-2004

This paper presents two different efficiency-enhancement techniques for probabilistic model building genetic algorithms. The first technique proposes the use of a mutation operator which performs local search in the sub-solution neighborhood identified through the probabilistic model. The second technique proposes building and using an internal probabilistic model of the fitness along with the probabilistic model of variable interactions. The fitness values of some offspring are estimated using the probabilistic model, thereby avoiding computationally expensive function evaluations. The scalability of the aforementioned techniques are analyzed using facetwise models for convergence time and population sizing. The speed-up obtained by each of the methods is predicted and verified with empirical results. The results show that for additively separable problems the competent mutation operator requires O(k 0.5 logm)--where k is the building-block size, and m is the number of building blocks--less function evaluations than its selectorecombinative counterpart. The results also show that the use of an internal probabilistic fitness model reduces the required number of function evaluations to as low as 1-10% and yields a speed-up of 2--50., Comment: Optimization by Building and Using Probabilistic Models. Workshop at the 2004 Genetic and Evolutionary Computation Conference

This paper studies fitness inheritance as an efficiency enhancement technique for a class of competent genetic algorithms called estimation distribution algorithms. Probabilistic models of important sub-solutions are developed to estimate the fitness of a proportion of individuals in the population, thereby avoiding computationally expensive function evaluations. The effect of fitness inheritance on the convergence time and population sizing are modeled and the speed-up obtained through inheritance is predicted. The results show that a fitness-inheritance mechanism which utilizes information on building-block fitnesses provides significant efficiency enhancement. For additively separable problems, fitness inheritance reduces the number of function evaluations to about half and yields a speed-up of about 1.75--2.25., Comment: IEEE International Conference on Evolutionary Computation (CEC-2004)

The parameter-less hierarchical Bayesian optimization algorithm (hBOA) enables the use of hBOA without the need for tuning parameters for solving each problem instance. There are three crucial parameters in hBOA: (1) the selection pressure, (2) the window size for restricted tournaments, and (3) the population size. Although both the selection pressure and the window size influence hBOA performance, performance should remain low-order polynomial with standard choices of these two parameters. However, there is no standard population size that would work for all problems of interest and the population size must thus be eliminated in a different way. To eliminate the population size, the parameter-less hBOA adopts the population-sizing technique of the parameter-less genetic algorithm. Based on the existing theory, the parameter-less hBOA should be able to solve nearly decomposable and hierarchical problems in quadratic or subquadratic number of function evaluations without the need for setting any parameters whatsoever. A number of experiments are presented to verify scalability of the parameter-less hBOA., Comment: about 12 pages, submitted to GECCO-2004

This paper describes how fitness inheritance can be used to estimate fitness for a proportion of newly sampled candidate solutions in the Bayesian optimization algorithm (BOA). The goal of estimating fitness for some candidate solutions is to reduce the number of fitness evaluations for problems where fitness evaluation is expensive. Bayesian networks used in BOA to model promising solutions and generate the new ones are extended to allow not only for modeling and sampling candidate solutions, but also for estimating their fitness. The results indicate that fitness inheritance is a promising concept in BOA, because population-sizing requirements for building appropriate models of promising solutions lead to good fitness estimates even if only a small proportion of candidate solutions is evaluated using the actual fitness function. This can lead to a reduction of the number of actual fitness evaluations by a factor of 30 or more., Comment: IlliGAL Report No. 2004009, Illinois Genetic Algorithms Laboratory, University of Illinois at Urbana-Champaign, Urbana, IL. Download also from http://www-illigal.ge.uiuc.edu/

We discuss the computational complexity of random 2D Ising spin glasses, which represent an interesting class of constraint satisfaction problems for black box optimization. Two extremal cases are considered: (1) the +/- J spin glass, and (2) the Gaussian spin glass. We also study a smooth transition between these two extremal cases. The computational complexity of all studied spin glass systems is found to be dominated by rare events of extremely hard spin glass samples. We show that complexity of all studied spin glass systems is closely related to Frechet extremal value distribution. In a hybrid algorithm that combines the hierarchical Bayesian optimization algorithm (hBOA) with a deterministic bit-flip hill climber, the number of steps performed by both the global searcher (hBOA) and the local searcher follow Frechet distributions. Nonetheless, unlike in methods based purely on local search, the parameters of these distributions confirm good scalability of hBOA with local search. We further argue that standard performance measures for optimization algorithms--such as the average number of evaluations until convergence--can be misleading. Finally, our results indicate that for highly multimodal constraint satisfaction problems, such as Ising spin glasses, recombination-based search can provide qualitatively better results than mutation-based search., Comment: 12 pages, submitted to GECCO-2004