2,943 results on '"P. Kala"'
Search Results
152. Separating the effects of early and later life adiposity on colorectal cancer risk: a Mendelian randomization study
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Papadimitriou, Nikos, Bull, Caroline J., Jenab, Mazda, Hughes, David J., Bell, Joshua A., Sanderson, Eleanor, Timpson, Nicholas J., Smith, George Davey, Albanes, Demetrius, Campbell, Peter T., Küry, Sébastien, Le Marchand, Loic, Ulrich, Cornelia M., Visvanathan, Kala, Figueiredo, Jane C., Newcomb, Polly A., Pai, Rish K., Peters, Ulrike, Tsilidis, Kostas K., Boer, Jolanda M. A., Vincent, Emma E., Mariosa, Daniela, Gunter, Marc J., Richardson, Tom G., and Murphy, Neil
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- 2023
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153. Malaria transmission pattern across the Sahelian, humid savanna, highland and forest eco-epidemiological settings in Cameroon
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Chouakeu, Nelly Armanda Kala, Tchuinkam, Timoléon, Bamou, Roland, Bindamu, Mabu Maxim, Talipouo, Abdou, Kopya, Edmond, Awono-Ambene, Parfait, and Antonio-Nkondjio, Christophe
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- 2023
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154. Potential utility of risk stratification for multicancer screening with liquid biopsy tests
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Kim, Elle S., Scharpf, Robert B., Garcia-Closas, Montserrat, Visvanathan, Kala, Velculescu, Victor E., and Chatterjee, Nilanjan
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- 2023
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155. Implementing health communication tools at scale: mobile audio messaging and paper-based job aids for front-line workers providing community health education to mothers in Bihar, India
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Ward, Victoria, Abdalla, Safa, Raheel, Hina, Weng, Yingjie, Godfrey, Anna, Dutt, Priyanka, Mitra, Radharani, Sastry, Padmapriya, Chamberlain, Sara, Shannon, Melissa, Mehta, Kala, Bentley, Jason, Darmstadt, Gary L, Atmavilas, Yamini, Bhattacharya, Debarshi, Borkum, Evan, Carmichael, Suzan L, Chaudhuri, Indrajit, Creanga, Andreea, Irani, Laili, Krishnan, Suneeta, Mahapatra, Tanmay, Mehta, Kala M, Mitra, Radhirani, Munar, Wolfgang, Nanda, Priya, Pepper, Kevin, Rangarajan, Anu, Saggurti, Niranjan, Schooley, Janine, Shah, Hemant, Srikantiah, Sridhar, Tarigopula, Usha Kiran, Walker, Dilys, and Wilhelm, Jess
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Public Health ,Health Sciences ,Contraception/Reproduction ,Prevention ,Clinical Research ,Reproductive health and childbirth ,Good Health and Well Being ,Child ,Female ,Health Communication ,Health Education ,Humans ,India ,Infant Health ,Infant ,Newborn ,Mothers ,child health ,maternal health ,paediatrics ,prevention strategies ,public health ,Ananya Study Group ,Health services and systems ,Public health - Abstract
As part of an investment by the Bill & Melinda Gates Foundation to support the Government of Bihar to improve reproductive, maternal, newborn and child health and nutrition (RMNCHN) statewide, BBC Media Action implemented multiple communication tools to support front-line worker (FLW) outreach. We analyse the impacts of a package of mHealth audio messaging and paper-based job aids used by FLWs during government-sponsored village health, sanitation and nutrition days (VHSNDs) on knowledge and practices of childbearing women across the RMNCHN continuum of care. Data from two surveys collected between July and September 2016 were analysed using logistic regression to compare health-related knowledge and behaviours between women who had been exposed at VHSNDs to the mHealth GupShup Potli (GSP) audio recordings or interpersonal communication (IPC) tools versus those who were unexposed. Exposure to GSP recordings (n=2608) was associated with improved knowledge across all continuum-of-care domains, as well as improved health-related behaviours in some domains. The odds of having taken iron-folic acid (IFA) tablets were significantly higher in exposed women (OR 1.5, 95% CI 1.1 to 2.2), as was contraceptive use (OR 2.0, 95% CI 1.2 to 3.2). There were no differences in birth preparedness or complementary feeding practices between groups. Exposure to IPC paper-based tools (n=2002) was associated with a twofold increased odds of IFA consumption (OR 2.3, 95% CI 1.7 to 3.2) and contraceptive use (OR 1.8, 95% CI 1.2 to 2.8). Women exposed to both tools were generally at least twice as likely to subsequently discuss the messages with others. BBC Media Action's mHealth audio messaging job aids and paper-based IPC tools were associated with improved knowledge and practices of women who were exposed to them across multiple domains, suggesting their important potential for improving health outcomes for beneficiaries at scale in low-resource settings. NCT02726230.
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- 2021
156. Cubic nonlinear squeezing and its decoherence
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Kala, Vojtěch, Marek, Petr, and Filip, Radim
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Quantum Physics - Abstract
Squeezed states of the harmonic oscillator are a common resource in applications of quantum technology. If the noise is suppressed in a nonlinear combination of quadrature operators below threshold for all possible up-to-quadratic Hamiltonians, the quantum states are non-Gaussian and we refer to the noise reduction as nonlinear squeezing. Non-Gaussian aspects of quantum states are often more vulnerable to decoherence due to imperfections appearing in realistic experimental implementations. Therefore, a stability of nonlinear squeezing is essential. We analyze the behavior of quantum states with cubic nonlinear squeezing under loss and dephasing. The properties of nonlinear squeezed states depend on their initial parameters which can be optimized and adjusted to achieve the maximal robustness for the potential applications., Comment: 17 pages, 10 figures
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- 2021
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157. Probing the diabetes and colorectal cancer relationship using gene – environment interaction analyses
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Dimou, Niki, Kim, Andre E., Flanagan, Orlagh, Murphy, Neil, Diez-Obrero, Virginia, Shcherbina, Anna, Aglago, Elom K., Bouras, Emmanouil, Campbell, Peter T., Casey, Graham, Gallinger, Steven, Gruber, Stephen B., Jenkins, Mark A., Lin, Yi, Moreno, Victor, Ruiz-Narvaez, Edward, Stern, Mariana C., Tian, Yu, Tsilidis, Kostas K., Arndt, Volker, Barry, Elizabeth L., Baurley, James W., Berndt, Sonja I., Bézieau, Stéphane, Bien, Stephanie A., Bishop, D. Timothy, Brenner, Hermann, Budiarto, Arif, Carreras-Torres, Robert, Cenggoro, Tjeng Wawan, Chan, Andrew T., Chang-Claude, Jenny, Chanock, Stephen J., Chen, Xuechen, Conti, David V., Dampier, Christopher H., Devall, Matthew, Drew, David A., Figueiredo, Jane C., Giles, Graham G., Gsur, Andrea, Harrison, Tabitha A., Hidaka, Akihisa, Hoffmeister, Michael, Huyghe, Jeroen R., Jordahl, Kristina, Kawaguchi, Eric, Keku, Temitope O., Larsson, Susanna C., Le Marchand, Loic, Lewinger, Juan Pablo, Li, Li, Mahesworo, Bharuno, Morrison, John, Newcomb, Polly A., Newton, Christina C., Obon-Santacana, Mireia, Ose, Jennifer, Pai, Rish K., Palmer, Julie R., Papadimitriou, Nikos, Pardamean, Bens, Peoples, Anita R., Pharoah, Paul D. P., Platz, Elizabeth A., Potter, John D., Rennert, Gad, Scacheri, Peter C., Schoen, Robert E., Su, Yu-Ru, Tangen, Catherine M., Thibodeau, Stephen N., Thomas, Duncan C., Ulrich, Cornelia M., Um, Caroline Y., van Duijnhoven, Franzel J. B., Visvanathan, Kala, Vodicka, Pavel, Vodickova, Ludmila, White, Emily, Wolk, Alicja, Woods, Michael O., Qu, Conghui, Kundaje, Anshul, Hsu, Li, Gauderman, W. James, Gunter, Marc J., and Peters, Ulrike
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- 2023
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158. Characterization and pathological analysis of Flavobacterium tructae recovered from farmed rainbow trout, Oncorhynchus mykiss (Walbaum, 1792), in the Indian Himalayan Region
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Mallik, Sumanta Kumar, Singh, Shivam, Shahi, Neetu, Pathak, Richa, Kala, Krishna, Das, Partha, Singh, Bhupendra, Giri, Abhay Kumar, Chandra, Suresh, Sarma, Debajit, and Pandey, Pramod Kumar
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- 2023
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159. Cloud computing in agriculture: a bibliometric and network visualization analysis
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Punjani, Krunal K., Mahadevan, Kala, Gunasekaran, Angappa, Kumar, V. V. Ravi, and Joshi, Sujata
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- 2023
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160. Neuroepigenetic Changes in DNA Methylation Affecting Diabetes-Induced Cognitive Impairment
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Fernandes, Valencia, Preeti, Kumari, Sood, Anika, Nair, Kala P., Khan, Sabiya, Rao, B. S. Shankaranarayana, Khatri, Dharmendra Kumar, and Singh, Shashi Bala
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- 2023
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161. Dengue: Update on Clinically Relevant Therapeutic Strategies and Vaccines
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Palanichamy Kala, Monica, St. John, Ashley L., and Rathore, Abhay P. S.
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- 2023
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162. T-cell cellular stress and reticulocyte signatures, but not loss of naïve T lymphocytes, characterize severe COVID-19 in older adults
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Jergović, Mladen, Watanabe, Makiko, Bhat, Ruchika, Coplen, Christopher P., Sonar, Sandip A., Wong, Rachel, Castaneda, Yvonne, Davidson, Lisa, Kala, Mrinalini, Wilson, Rachel C., Twigg, III, Homer L., Knox, Kenneth, Erickson, Heidi E., Weinkauf, Craig C., Bime, Christian, Bixby, Billie A., Parthasarathy, Sairam, Mosier, Jarrod M., LaFleur, Bonnie J., Bhattacharya, Deepta, and Nikolich, Janko Z.
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- 2023
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163. Traditional food knowledge of local people and its sustainability in mountains of Uttarakhand State of India
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Kala, Chandra Prakash and Nautiyal, Sunil
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- 2023
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164. Soluble TREM2 inhibits secondary nucleation of Aβ fibrillization and enhances cellular uptake of fibrillar Aβ
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Belsare, Ketaki D, Wu, Haifan, Mondal, Dibyendu, Bond, Annalise, Castillo, Erika, Jin, Jia, Jo, Hyunil, Roush, Addison E, Pilla, Kala Bharath, Sali, Andrej, Condello, Carlo, and DeGrado, William F
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Biochemistry and Cell Biology ,Biological Sciences ,Neurosciences ,Acquired Cognitive Impairment ,Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD) ,Brain Disorders ,Dementia ,Alzheimer's Disease ,Aging ,Neurodegenerative ,2.1 Biological and endogenous factors ,Aetiology ,Generic health relevance ,Alzheimer Disease ,Amyloid ,Amyloid beta-Peptides ,Animals ,Humans ,Kinetics ,Membrane Glycoproteins ,Mice ,Microglia ,Mutation ,Peptide Fragments ,Plaque ,Amyloid ,Receptors ,Immunologic ,tau Proteins ,soluble TREM2 ,amyloid-f3 ,Alzheimer's disease ,integrative modeling ,fibrillization kinetics ,Alzheimer’s disease ,amyloid-β - Abstract
Triggering receptor expressed on myeloid cells 2 (TREM2) is a single-pass transmembrane receptor of the immunoglobulin superfamily that is secreted in a soluble (sTREM2) form. Mutations in TREM2 have been linked to increased risk of Alzheimer's disease (AD). A prominent neuropathological component of AD is deposition of the amyloid-β (Aβ) into plaques, particularly Aβ40 and Aβ42. While the membrane-bound form of TREM2 is known to facilitate uptake of Aβ fibrils and the polarization of microglial processes toward amyloid plaques, the role of its soluble ectodomain, particularly in interactions with monomeric or fibrillar Aβ, has been less clear. Our results demonstrate that sTREM2 does not bind to monomeric Aβ40 and Aβ42, even at a high micromolar concentration, while it does bind to fibrillar Aβ42 and Aβ40 with equal affinities (2.6 ± 0.3 µM and 2.3 ± 0.4 µM). Kinetic analysis shows that sTREM2 inhibits the secondary nucleation step in the fibrillization of Aβ, while having little effect on the primary nucleation pathway. Furthermore, binding of sTREM2 to fibrils markedly enhanced uptake of fibrils into human microglial and neuroglioma derived cell lines. The disease-associated sTREM2 mutant, R47H, displayed little to no effect on fibril nucleation and binding, but it decreased uptake and functional responses markedly. We also probed the structure of the WT sTREM2-Aβ fibril complex using integrative molecular modeling based primarily on the cross-linking mass spectrometry data. The model shows that sTREM2 binds fibrils along one face of the structure, leaving a second, mutation-sensitive site free to mediate cellular binding and uptake.
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- 2022
165. Association of Stress-Health Factors among Parkinson’s Disease Patient/Caregiving-Partner Dyads
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Phillips, Kala M, Siwik, Chelsea, Rodgers, Allison, Salmon, Paul, Litvan, Irene, Jablonski, Megan E, Filoteo, J Vincent, Cash, Elizabeth, and Sephton, Sandra E
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Clinical Research ,Mind and Body ,Behavioral and Social Science ,Neurodegenerative ,Parkinson's Disease ,Mental Health ,Brain Disorders ,Neurosciences ,Good Health and Well Being ,Cross-Sectional Studies ,Humans ,Neuropsychological Tests ,Parkinson Disease ,Pilot Projects ,Prospective Studies ,Quality of Life ,Anxiety ,Caregiver issues ,Parkinson’s disease ,Quality of life ,Psychology ,Cognitive Sciences ,Clinical Psychology - Abstract
ObjectiveFew studies have explored the shared effects of Parkinson's disease (PD) within patient/caregiver dyads. To fill this gap, we compared stress-health outcomes of patients with those of caregiving-partners, examined individual stress-health associations, and explored stress-health associations within dyads.MethodA total of 18 PD patient/caregiving-partner dyads (N = 36) reported on disease-specific distress, anxiety, quality of life (QOL), and provided saliva samples for cortisol assessment. This cross-sectional, secondary analysis of a prospective pilot study used Actor-Partner Interdependence Models to test aims.ResultsPatients reported greater anxiety, poorer QOL, and demonstrated flatter cortisol slopes and higher mean bedtime cortisol compared to caregiving-partners. Both patients and caregiving-partners with greater anxiety had elevated bedtime cortisol and poorer QOL. Greater disease-specific distress in an individual was associated with higher diurnal mean cortisol in their partner.ConclusionsFindings highlight the potential for psychosocial interventions at the dyadic level to reduce shared burden and promote coping among PD patient/caregiving-partner dyads.
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- 2022
166. Improving the precision of maternal, newborn, and child health impact through geospatial analysis of the association of contextual and programmatic factors with health trends in Bihar, India
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Abdalla, Safa, Pair, Emma, Mehta, Kala, Ward, Victoria, Mahapatra, Tanmay, and Darmstadt, Gary L
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Public Health ,Health Sciences ,Clinical Research ,Generic health relevance ,Reproductive health and childbirth ,Good Health and Well Being ,Infant ,Newborn ,Child ,Pregnancy ,Female ,Humans ,Child Health ,Bayes Theorem ,Mothers ,Prenatal Care ,Odds Ratio ,Public Health and Health Services ,Public health - Abstract
BackgroundThere is a scarcity of research that comprehensively examines programme impact from a context-specific perspective. We aimed to determine the conditions under which the Bihar Technical Support Programme led to more favourable outcomes for maternal and child health in Bihar.MethodsWe obtained block-level data on maternal and child health indicators during the state-wide scale-up of the pilot Ananya programme and data on health facility readiness, along with geographical and sociodemographic variables. We examined the associations of these factors with increases in the levels of indicators using multilevel logistic regression, and the associations with rates of change in the indicators using Bayesian Hierarchical modelling.ResultsFrontline worker (FLW) visits between 2014-2017 were more likely to increase in blocks with better night lighting (odds ratio (OR) = 1.23, 95% confidence interval (CI) = 1.01-1.51). Birth preparedness increased in blocks with increasing FLW visits (OR = 3.43, 95% CI = 1.15-10.21), while dry cord care practice increased in blocks where satisfaction with FLW visits was increasing (OR = 1.52, 95% CI = 1.10-2.11). Age-appropriate frequency of complementary feeding increased in blocks with higher development index (OR = 1.55, 95% CI = 1.16-2.06) and a higher percentage of scheduled caste or tribe (OR = 3.21, 95% CI = 1.13-9.09). An increase in most outcomes was more likely in areas with lower baseline levels.ConclusionsContextual factors (eg, night lighting and development) not targeted by the programme and FLW visits were associated with favourable programme outcomes. Intervention design, including intervention selection for a particular geography, should be modified to fit the local context in the short term. Expanding collaborations beyond the health sector to influence modifiable contextual factors in the long term can result in a higher magnitude and more sustainable impact.RegistrationClinicalTrials.gov: NCT02726230.
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- 2022
167. Diné Navajo Resilience to the COVID-19 pandemic
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Denetclaw, Wilfred F, Otto, Zara K, Christie, Samantha, Allen, Estrella, Cruz, Maria, Potter, Kassandra A, and Mehta, Kala M
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Biomedical and Clinical Sciences ,Clinical Sciences ,American Indian or Alaska Native ,Vaccine Related ,Prevention ,COVID-19 ,Cross-Sectional Studies ,Humans ,Indians ,North American ,New Mexico ,Pandemics ,United States ,General Science & Technology - Abstract
ObjectiveTo date, there are no studies of COVID-19 cases and deaths in the Navajo Nation, US. The primary objective of this manuscript is to understand whether counties with a higher proportion of Navajo (Diné) population also had higher cases and deaths of COVID-19 and whether these dropped with vaccination.MethodWe undertook a cross-sectional analysis of county level data from March 16, 2020-May 11, 2021. Data were obtained from public repositories and the US Census for the Navajo Nation, including northeastern Arizona, southeastern Utah, and northwestern New Mexico. The primary outcome measure is the number of individuals with confirmed cases or deaths of COVID-19. A secondary outcome was COVID-19 vaccinations.ResultsThe 11 counties in Navajo Nation have a wide variation in the percent Navajo population, the resources available (ICU beds and occupancy), and COVID-19 outcomes. Overall, there was a substantial increase in the number of cases from March 16 -July 16, 2020 (the height of the pandemic) with a doubling time of 10.12 days on Navajo Nation. The percent Navajo population was a strong predictor of COVID-19 cases and deaths per million population. COVID-19 vaccinations were inversely associated with COVID-19 cases and deaths in these counties.ConclusionsThe COVID-19 pandemic on the Navajo Nation is a story of resilience. Navajo Nation was one of the hardest hit areas of the United States, with peak cases and deaths due to COVID-19. With an aggressive vaccination effort, these cases and deaths were strikingly curtailed, showing the resilience of the Navajo (Diné) people.
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- 2022
168. Optimizing Furnace efficiency for Factory of Future using Cooperative Games
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Shaju, Sreenath, Sukhwani, Mohak, and Kala, Ankit
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Electrical Engineering and Systems Science - Systems and Control - Abstract
Approximately 75% of energy used in petrochemical and refining industries is consumed by furnaces. Operating furnaces at optimal conditions results in huge amounts of savings. In this paper, we model the furnace efficiency optimization as a multi-objective problem involving multiple interactions among the controlled variables and propose a cooperative game based formulation for the factory of future. The controlled variables are Absorbed Duty and Coil Outlet Temperature. We propose a comprehensive solution to select the best combination of manipulated variables (fired duty, throughput and coil inlet temperature) satisfying multiple criteria using a cooperative game theory approach. We compare this approach with the standard multi-objective optimization using NSGA-II and RNSGA-II algorithms., Comment: 6 pages
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- 2021
169. Safe and persistent growth-promoting effects of vosoritide in children with achondroplasia: 2-year results from an open-label, phase 3 extension study
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Savarirayan, Ravi, Tofts, Louise, Irving, Melita, Wilcox, William R, Bacino, Carlos A, Hoover-Fong, Julie, Font, Rosendo Ullot, Harmatz, Paul, Rutsch, Frank, Bober, Michael B, Polgreen, Lynda E, Ginebreda, Ignacio, Mohnike, Klaus, Charrow, Joel, Hoernschemeyer, Daniel, Ozono, Keiichi, Alanay, Yasemin, Arundel, Paul, Kotani, Yumiko, Yasui, Natsuo, White, Klane K, Saal, Howard M, Leiva-Gea, Antonio, Luna-González, Felipe, Mochizuki, Hiroshi, Basel, Donald, Porco, Dania M, Jayaram, Kala, Fisheleva, Elena, Huntsman-Labed, Alice, and Day, Jonathan RS
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Clinical Trials and Supportive Activities ,Clinical Research ,Pediatric ,6.1 Pharmaceuticals ,Evaluation of treatments and therapeutic interventions ,Decent Work and Economic Growth ,Achondroplasia ,Child ,Double-Blind Method ,Humans ,Natriuretic Peptide ,C-Type ,Treatment Outcome ,Genetics ,Clinical Sciences ,Genetics & Heredity - Abstract
PurposeAchondroplasia is caused by pathogenic variants in the fibroblast growth factor receptor 3 gene that lead to impaired endochondral ossification. Vosoritide, an analog of C-type natriuretic peptide, stimulates endochondral bone growth and is in development for the treatment of achondroplasia. This phase 3 extension study was conducted to document the efficacy and safety of continuous, daily vosoritide treatment in children with achondroplasia, and the two-year results are reported.MethodsAfter completing at least six months of a baseline observational growth study, and 52 weeks in a double-blind, placebo-controlled study, participants were eligible to continue treatment in an open-label extension study, where all participants received vosoritide at a dose of 15.0 μg/kg/day.ResultsIn children randomized to vosoritide, annualized growth velocity increased from 4.26 cm/year at baseline to 5.39 cm/year at 52 weeks and 5.52 cm/year at week 104. In children who crossed over from placebo to vosoritide in the extension study, annualized growth velocity increased from 3.81 cm/year at week 52 to 5.43 cm/year at week 104. No new adverse effects of vosoritide were detected.ConclusionVosoritide treatment has safe and persistent growth-promoting effects in children with achondroplasia treated daily for two years.
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- 2021
170. A Momentum-Conserving Implicit Material Point Method for Surface Energies with Spatial Gradients
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Chen, Jingyu, Kala, Victoria, Marquez-Razon, Alan, Gueidon, Elias, Hyde, David A. B., and Teran, Joseph
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Computer Science - Graphics ,Computer Science - Computational Engineering, Finance, and Science ,I.3.0 ,I.6.0 - Abstract
We present a novel Material Point Method (MPM) discretization of surface tension forces that arise from spatially varying surface energies. These variations typically arise from surface energy dependence on temperature and/or concentration. Furthermore, since the surface energy is an interfacial property depending on the types of materials on either side of an interface, spatial variation is required for modeling the contact angle at the triple junction between a liquid, solid and surrounding air. Our discretization is based on the surface energy itself, rather than on the associated traction condition most commonly used for discretization with particle methods. Our energy based approach automatically captures surface gradients without the explicit need to resolve them as in traction condition based approaches. We include an implicit discretization of thermomechanical material coupling with a novel particle-based enforcement of Robin boundary conditions associated with convective heating. Lastly, we design a particle resampling approach needed to achieve perfect conservation of linear and angular momentum with AffineParticle-In-Cell (APIC) [Jiang et al. 2015]. We show that our approach enables implicit time stepping for complex behaviors like the Marangoni effect and hydrophobicity/hydrophilicity. We demonstrate the robustness and utility of our method by simulating materials that exhibit highly diverse degrees of surface tension and thermomechanical effects, such as water, wine and wax.
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- 2021
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171. Number fields without universal quadratic forms of small rank exist in most degrees
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Kala, Vítězslav
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Mathematics - Number Theory ,11E12, 11E20, 11R21, 11R80 - Abstract
We prove that in each degree divisible by 2 or 3, there are infinitely many totally real number fields that require universal quadratic forms to have arbitrarily large rank., Comment: 6 pages
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- 2021
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172. Trends in reproductive, maternal, newborn and child health and nutrition indicators during five years of piloting and scaling-up of Ananya interventions in Bihar, India
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Abdalla, Safa, Weng, Yingjie, Mehta1, Kala M, Mahapatra, Tanmay, Srikantiah, Sridhar, Shah, Hemant, Ward, Victoria C, Pepper, Kevin T, Bentley, Jason, Carmichael, Suzan L, Creanga, Andreea, Wilhelm, Jess, Tarigopula, Usha Kiran, Nanda, Priya, Bhattacharya, Debarshi, Atmavilas, Yamini, Darmstadt, Gary L, Borkum, Evan, Chaudhuri, Indrajit, Dutt, Priyanka, Delhi, New, Irani, Laili, Krishnan, Suneeta, Mehta, Kala M, Francisco, San, Mitra, Radhirani, Munar, Wolfgang, Raheel, Hina, Rangarajan, Anu, Saggurti, Niranjan, Sastry, Padmapriya, Schooley, Janine, and Walker, Dilys
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Public Health ,Health Sciences ,Health Services ,Pediatric ,Prevention ,Clinical Research ,Reproductive health and childbirth ,Generic health relevance ,Good Health and Well Being ,Child ,Child Health ,Cross-Sectional Studies ,Female ,Health Promotion ,Health Status Indicators ,Humans ,India ,Infant Health ,Infant ,Newborn ,Maternal Health ,Nutritional Status ,Pilot Projects ,Pregnancy ,Program Evaluation ,Reproductive Health ,Ananya Study Group ,Public Health and Health Services ,Public health - Abstract
BackgroundThe Ananya program in Bihar implemented household and community-level interventions to improve reproductive, maternal, newborn and child health and nutrition (RMNCHN) in two phases: a first phase of intensive ancillary support to governmental implementation and innovation testing by non-government organisation (NGO) partners in eight focus districts (2012-2014), followed by a second phase of state-wide government-led implementation with techno-managerial assistance from NGOs (2014 onwards). This paper examines trends in RMNCHN indicators in the program's implementation districts from 2012-2017.MethodsEight consecutive rounds of cross-sectional Community-based Household Surveys conducted by CARE India in 2012-2017 provided comparable data on a large number of indicators of frontline worker (FLW) performance, mothers' behaviours, and facility-based care and outreach service delivery across the continuum of maternal and child care. Logistic regression, considering the complex survey design and sample weights generated by that design, was used to estimate trends using survey rounds 2-5 for the first phase in the eight focus districts and rounds 6-9 for the second phase in all 38 districts statewide, as well as the overall change from round 2-9 in focus districts. To aid in contextualising the results, indicators were also compared amongst the formerly focus and the non-focus districts at the beginning of the second phase.ResultsIn the first phase, the levels of 34 out of 52 indicators increased significantly in the focus districts, including almost all indicators of FLW performance in antenatal and postnatal care, along with mother's birth preparedness, some breastfeeding practices, and immunisations. Between the two phases, 33 of 52 indicators declined significantly. In the second phase, the formerly focus districts experienced a rise in the levels of 14 of 50 indicators and a decline in the levels of 14 other indicators. There was a rise in the levels of 22 out of 50 indicators in the non-focus districts in the second phase, with a decline in the levels of 13 other indicators.ConclusionsImprovements in indicators were conditional on implementation support to program activities at a level of intensity that was higher than what could be achieved at scale so far. Successes during the pilot phase of intensive support suggests that RMNCHN can be improved statewide in Bihar with sufficient investments in systems performance improvements.Study registrationClinicalTrials.gov number NCT02726230.
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- 2020
173. Exploring Factors Affecting the Adoption of MOOC in Generation Z Using Extended UTAUT2 Model
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Meet, Rakesh Kumar, Kala, Devkant, and Al-Adwan, Ahmad Sam
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The advent of Internet heralded the rise of scalable educational technology dubbed as massive open online course (MOOC). Easy to use, access, economical as well as flexible, provide students lot of freedom and the advantage of self-paced learning. Despite all these merits, MOOC adoption is low in the higher educational institutions (HEIs) of India. The aim of this study is to explore the factors affecting the behavioural intention to adopt MOOCs among Generation Z (Gen Z) enrolled in the Indian HEIs. The study uses the extended UTAUT2 model with additional constructs of language competency and teacher influence to explore MOOC adoption among the Gen Z. Using online survey, data of 483 students was collected from HEIs of India using stratified random sampling and analysed using partial least square-structure equation modelling (PLS-SEM) technique. The results establish the general applicability of UTAUT2 model in context of MOOC in Indian settings with explanatory power of 69.9% and highlights the positive influence of price value, hedonic motivation, facilitating conditions, performance expectancy and effort expectancy on MOOC adoption. However, the constructs of social influence, habit, language competency, and teacher influence unexpectedly do not have an impact on Behavioural Intention of Gen Z towards MOOC adoption. Based on the research findings, study implications and future directions of the research have been suggested.
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- 2022
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174. A Randomized Study to Assess the Effect of Including the Graduate Record Examinations (GRE) Results on Reviewers Scores for Underrepresented Minorities
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Dang, Kristina V, Rerolle, Francois, Ackley, Sarah F, Irish, Amanda M, Mehta, Kala M, Bailey, Inez, Fair, Elizabeth, Miller, Cecily, Bibbins-Domingo, Kirsten, Wong-Moy, Eva, Glymour, M Maria, and Morris, Meghan D
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Mental Health ,Clinical Research ,American Indian or Alaska Native ,Academic Success ,Adult ,College Admission Test ,Education ,Graduate ,Humans ,Male ,Minority Groups ,Racial Groups ,Racism ,San Francisco ,School Admission Criteria ,diversity ,education ,graduate admissions ,Graduate Record Examinations ,randomized study ,underrepresented minority ,Mathematical Sciences ,Medical and Health Sciences ,Epidemiology - Abstract
Whether requiring Graduate Record Examinations (GRE) results for doctoral applicants affects the diversity of admitted cohorts remains uncertain. This study randomized applications to 2 population-health doctoral programs at the University of California San Francisco to assess whether masking reviewers to applicant GRE results differentially affects reviewers' scores for underrepresented minority (URM) applicants from 2018-2020. Applications with GRE results and those without were randomly assigned to reviewers to designate scores for each copy (1-10, 1 being best). URM was defined as self-identification as African American/Black, Filipino, Hmong, Vietnamese, Hispanic/Latinx, Native American/Alaska Native, or Native Hawaiian/Other Pacific Islander. We used linear mixed models with random effects for the applicant and fixed effects for each reviewer to evaluate the effect of masking the GRE results on the overall application score and whether this effect differed by URM status. Reviewer scores did not significantly differ for unmasked versus masked applications among non-URM applicants (β = 0.15; 95% CI: -0.03, 0.33) or URM applicants (β = 0.02, 95% CI: -0.49, 0.54). We did not find evidence that removing GREs differentially affected URM compared with non-URM students (β for interaction = -0.13, 95% CI: -0.55, 0.29). Within these doctoral programs, results indicate that GRE scores neither harm nor help URM applicants.
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- 2021
175. Dynamic Head-on Robot Collision Avoidance Using LSTM
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Jafri, S. M. Haider and Kala, Rahul
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- 2023
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176. Correction to: cRel and Wnt5a/Frizzled 5 Receptor-Mediated Inflammatory Regulation Reveal Novel Neuroprotectin D1 Targets for Neuroprotection
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Calandria, Jorgelina M., Do, Khanh V., Kala-Bhattacharjee, Sayantani, Obenaus, Andre, Belayev, Ludmila, and Bazan, Nicolas G.
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- 2023
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177. Deflection of Light Around a Rotating BTZ Black Hole
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Kala, Shubham, Nandan, Hemwati, and Sharma, Prateek
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General Relativity and Quantum Cosmology - Abstract
We present a detailed study of gravitational lensing around a rotating BTZ black hole in (2+1) dimensional gravity. The study of orbits for massless test particle around this BH spacetime is performed to describe the nature of cosmological constant in lower dimensions. We study the effect of cosmological constant on the photon orbit in view of other critical parameters. The bending angle of light is studied in view of different values of cosmological constant for direct and retrograde motion of test particles. It is being observed that the bending angle slightly decreases as the value of cosmological constant increases in the negative region.
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- 2020
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178. Deflection of Light and Shadow Cast by a Dual Charged Stringy Black Hole
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Kala, Shubham, Saurabh, Nandan, Hemwati, and Sharma, Prateek
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General Relativity and Quantum Cosmology - Abstract
Gravitational lensing and black hole shadows are one of the strongest observational evidences to prove the existence of black holes in the universe. The gravitational lensing arises due to the deflection of light by the gravitational field of a gravitating body such as a black hole. Investigation of the shadow cast by a compact object as well as deflection of light around it may provide the useful information about physical nature of the particular compact object and other related aspects. In this paper, we study the deflection of light by a dual charged stringy black hole spacetime derived in dilaton-Maxwell gravity. The variation of deflection angle with the impact parameter for different values of electric and magnetic charges is studied. We also study the shadow of this black hole spacetime to obtain the radius of shadow cast by it. We have considered an optically thin emission disk around it and observed that there are not significant changes in the shadow cast by this black hole compared to well-known Schwarzschild black hole spacetime in GR.
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- 2020
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179. Batching and Matching for Food Delivery in Dynamic Road Networks
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Joshi, Manas, Singh, Arshdeep, Ranu, Sayan, Bagchi, Amitabha, Karia, Priyank, and Kala, Puneet
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Computer Science - Databases ,Computer Science - Data Structures and Algorithms - Abstract
Given a stream of food orders and available delivery vehicles, how should orders be assigned to vehicles so that the delivery time is minimized? Several decisions have to be made: (1) assignment of orders to vehicles, (2) grouping orders into batches to cope with limited vehicle availability, and (3) adapting to dynamic positions of delivery vehicles. We show that the minimization problem is not only NP-hard but inapproximable in polynomial time. To mitigate this computational bottleneck, we develop an algorithm called FoodMatch, which maps the vehicle assignment problem to that of minimum weight perfect matching on a bipartite graph. To further reduce the quadratic construction cost of the bipartite graph, we deploy best-first search to only compute a subgraph that is highly likely to contain the minimum matching. The solution quality is further enhanced by reducing batching to a graph clustering problem and anticipating dynamic positions of vehicles through angular distance. Extensive experiments on food-delivery data from large metropolitan cities establish that FoodMatch is substantially better than baseline strategies on a number of metrics, while being efficient enough to handle real-world workloads., Comment: 12 pages, 9 figures, Accepted in ICDE 2021 as Short Paper
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- 2020
180. Universal quadratic forms, small norms and traces in families of number fields
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Kala, Vítězslav and Tinková, Magdaléna
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Mathematics - Number Theory ,11E12, 11R16, 11R80, 11H06, (11H50, 11J68, 11R44) - Abstract
We obtain good estimates on the ranks of universal quadratic forms over Shanks' family of the simplest cubic fields and several other families of totally real number fields. As the main tool we characterize all the indecomposable integers in these fields and the elements of the codifferent of small trace. We also determine the asymptotics of the number of principal ideals of norm less than the square root of the discriminant., Comment: 20 pages
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- 2020
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181. Sums of squares in $S$-integers
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Kala, Vítězslav and Yatsyna, Pavlo
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Mathematics - Number Theory ,11E25, 11E12, 11R11 - Abstract
In totally real number fields, we characterize the rings of $S$-integers (obtained by inverting a rational integer $m$) such that all their totally positive elements are represented as a sum of squares. We further obtain partial answers to the question: when are all the totally positive algebraic integers that are divisible by $m$ represented as a sum of squares?, Comment: 6 pages, to appear in New York J. Math
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- 2020
182. Unravelling the dynamics and causes of land subsidence in the National Capital Territory of Delhi, India, by spaceborne and in situ observations
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Chatterjee, R. S., Pranjal, Pranshu, Kannaujiya, Suresh, Thapa, Shailaja, Bhardwaj, Ashutosh, Kapoor, Uma, Dwivedi, S. N., Chandra, Rajesh, Srivastava, Rajiv Kumar, Singh, S. K., Kumar, Harsh, Bhattacharjee, Rajarshi, Singha, Shravanee, Kala, Sumi, and Kumar, Amit
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- 2023
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183. PH3 gas adsorption on S and Mo vacancy MoS2 monolayer: a first principle study
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Jayachandran, Meribah Jasmine, Kala C, Preferencial, and Thiruvadigal D, John
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- 2023
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184. Impact of Mn2+ substitution on physical and antibacterial properties of ZnFe2O4 nanoparticles
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Dakshina Murthy, Nadhiya, Arumugam, Kala, Palaniyandi, Thirunavukkarasu, Chandrasekaran, Sridhar, and Chandran, Karnan
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- 2023
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185. Bayesian metamodeling of complex biological systems across varying representations
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Raveh, Barak, Sun, Liping, White, Kate L, Sanyal, Tanmoy, Tempkin, Jeremy, Zheng, Dongqing, Bharath, Kala, Singla, Jitin, Wang, Chenxi, Zhao, Jihui, Li, Angdi, Graham, Nicholas A, Kesselman, Carl, Stevens, Raymond C, and Sali, Andrej
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Diabetes ,Bayes Theorem ,Computer Simulation ,Humans ,Linear Models ,Models ,Biological ,integrative modeling ,whole-cell modeling ,pancreatic beta-cell ,multiscale modeling ,Bayesian metamodeling ,pancreatic β-cell - Abstract
Comprehensive modeling of a whole cell requires an integration of vast amounts of information on various aspects of the cell and its parts. To divide and conquer this task, we introduce Bayesian metamodeling, a general approach to modeling complex systems by integrating a collection of heterogeneous input models. Each input model can in principle be based on any type of data and can describe a different aspect of the modeled system using any mathematical representation, scale, and level of granularity. These input models are 1) converted to a standardized statistical representation relying on probabilistic graphical models, 2) coupled by modeling their mutual relations with the physical world, and 3) finally harmonized with respect to each other. To illustrate Bayesian metamodeling, we provide a proof-of-principle metamodel of glucose-stimulated insulin secretion by human pancreatic β-cells. The input models include a coarse-grained spatiotemporal simulation of insulin vesicle trafficking, docking, and exocytosis; a molecular network model of glucose-stimulated insulin secretion signaling; a network model of insulin metabolism; a structural model of glucagon-like peptide-1 receptor activation; a linear model of a pancreatic cell population; and ordinary differential equations for systemic postprandial insulin response. Metamodeling benefits from decentralized computing, while often producing a more accurate, precise, and complete model that contextualizes input models as well as resolves conflicting information. We anticipate Bayesian metamodeling will facilitate collaborative science by providing a framework for sharing expertise, resources, data, and models, as exemplified by the Pancreatic β-Cell Consortium.
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- 2021
186. Effects of integrated economic and health interventions with women’s groups on health-related knowledge, behaviours and outcomes in low-income and middle-income countries: a systematic review protocol
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Desai, Sapna, Mehta, Kala M, Singh, Roopal Jyoti, Westley, Allie K, Dirisu, Osasuyi, Wong, Connie, De Hoop, Thomas, and Darmstadt, Gary L
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Health Services and Systems ,Public Health ,Health Sciences ,Prevention ,Clinical Trials and Supportive Activities ,Clinical Research ,Prevention of disease and conditions ,and promotion of well-being ,3.1 Primary prevention interventions to modify behaviours or promote wellbeing ,Generic health relevance ,Developing Countries ,Female ,Humans ,Income ,Poverty ,Qualitative Research ,Systematic Reviews as Topic ,Women ,public health ,health economics ,international health services ,Clinical Sciences ,Public Health and Health Services ,Other Medical and Health Sciences ,Biomedical and clinical sciences ,Health sciences ,Psychology - Abstract
IntroductionEconomic groups, such as microfinance or self-help groups are widely implemented in low-income and middle-income countries (LMICs). Women's groups are voluntary groups, which aim to improve the well-being of members through activities, such as joint savings, credit, livelihoods development and/or health activities. Health interventions are increasingly added on to existing women's economic groups as a public health intervention for women and their families. Here, we present the protocol for a mixed-methods systematic review we will conduct of the evidence on integrated economic and health interventions on women's groups to assess whether and how they improve health-related knowledge, behaviour and outcomes in LMICs.Methods and analysisWe will search seven electronic databases for published literature, along with manual searches and consultation. The review will include (1) randomised trials and non-randomised quasiexperimental studies of intervention effects of integrated economic and health interventions delivered through women's groups in LMICs, and (2) sibling studies that examine factors related to intervention content, context, implementation processes and costs. We will appraise risk of bias and study quality using standard tools. High and moderate quality studies will be grouped by health domain and synthesised without meta-analysis. Qualitative evidence will be thematically synthesised and integrated into the quantitative synthesis using a matrix approach.Ethics and disseminationThis protocol was reviewed and deemed exempt by the institutional review board at the American Institutes for Research. Findings will be shared through peer-reviewed publication and disseminated with programme implementers and policymakers engaged with women's groups.Prospero registration numberCRD42020199998.
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- 2021
187. Pharmacodynamic Correlates of Linezolid Activity and Toxicity in Murine Models of Tuberculosis
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Bigelow, Kristina M, Deitchman, Amelia N, Li, Si-Yang, Barnes-Boyle, Kala, Tyagi, Sandeep, Soni, Heena, Dooley, Kelly E, Savic, Rada, and Nuermberger, Eric L
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Orphan Drug ,Biodefense ,Vaccine Related ,Tuberculosis ,Prevention ,Emerging Infectious Diseases ,Rare Diseases ,Lung ,Infectious Diseases ,Infection ,Good Health and Well Being ,Animals ,Anti-Bacterial Agents ,Area Under Curve ,Disease Models ,Animal ,Linezolid ,Mice ,Microbial Sensitivity Tests ,Persistent Infection ,linezolid ,mouse ,pharmacodynamics ,pharmacokinetics ,tuberculosis ,Biological Sciences ,Medical and Health Sciences ,Microbiology - Abstract
BackgroundLinezolid (LZD) is bactericidal against Mycobacterium tuberculosis, but it has treatment-limiting toxicities. A better understanding of exposure-response relationships governing LZD efficacy and toxicity will inform dosing strategies. Because in vitro monotherapy studies yielded conflicting results, we explored LZD pharmacokinetic/pharmacodynamic (PK/PD) relationships in vivo against actively and nonactively multiplying bacteria, including in combination with pretomanid.MethodsLinezolid multidose pharmacokinetics were modeled in mice. Dose-fractionation studies were performed in acute (net bacterial growth) and chronic (no net growth) infection models. In acute models, LZD was administered alone or with bacteriostatic or bactericidal pretomanid doses. Correlations between PK/PD parameters and lung colony-forming units (CFUs) and complete blood counts were assessed.ResultsOverall, time above minimum inhibitory concentration (T>MIC) correlated best with CFU decline. However, in growth-constrained models (ie, chronic infection, coadministration with pretomanid 50 mg/kg per day), area under the concentration-time curve over MIC (AUC/MIC) had similar explanatory power. Red blood cell counts correlated strongly with LZD minimum concentration (Cmin).ConclusionsAlthough T>MIC was the most consistent correlate of efficacy, AUC/MIC was equally predictive when bacterial multiplication was constrained by host immunity or pretomanid. In effective combination regimens, administering the same total LZD dose less frequently may be equally effective and cause less Cmin-dependent toxicity.
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- 2021
188. Genetically predicted circulating concentrations of micronutrients and risk of colorectal cancer among individuals of European descent: a Mendelian randomization study
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Tsilidis, Konstantinos K, Papadimitriou, Nikos, Dimou, Niki, Gill, Dipender, Lewis, Sarah J, Martin, Richard M, Murphy, Neil, Markozannes, Georgios, Zuber, Verena, Cross, Amanda J, Burrows, Kimberley, Lopez, David S, Key, Timothy J, Travis, Ruth C, Perez-Cornago, Aurora, Hunter, David J, van Duijnhoven, Fränzel JB, Albanes, Demetrius, Arndt, Volker, Berndt, Sonja I, Bézieau, Stéphane, Bishop, D Timothy, Boehm, Juergen, Brenner, Hermann, Burnett-Hartman, Andrea, Campbell, Peter T, Casey, Graham, Castellví-Bel, Sergi, Chan, Andrew T, Chang-Claude, Jenny, de la Chapelle, Albert, Figueiredo, Jane C, Gallinger, Steven J, Giles, Graham G, Goodman, Phyllis J, Gsur, Andrea, Hampe, Jochen, Hampel, Heather, Hoffmeister, Michael, Jenkins, Mark A, Keku, Temitope O, Kweon, Sun-Seog, Larsson, Susanna C, Le Marchand, Loic, Li, Christopher I, Li, Li, Lindblom, Annika, Martín, Vicente, Milne, Roger L, Moreno, Victor, Nan, Hongmei, Nassir, Rami, Newcomb, Polly A, Offit, Kenneth, Pharoah, Paul DP, Platz, Elizabeth A, Potter, John D, Qi, Lihong, Rennert, Gad, Sakoda, Lori C, Schafmayer, Clemens, Slattery, Martha L, Snetselaar, Linda, Schenk, Jeanette, Thibodeau, Stephen N, Ulrich, Cornelia M, Van Guelpen, Bethany, Harlid, Sophia, Visvanathan, Kala, Vodickova, Ludmila, Wang, Hansong, White, Emily, Wolk, Alicja, Woods, Michael O, Wu, Anna H, Zheng, Wei, Bueno-de-Mesquita, Bas, Boutron-Ruault, Marie-Christine, Hughes, David J, Jakszyn, Paula, Kühn, Tilman, Palli, Domenico, Riboli, Elio, Giovannucci, Edward L, Banbury, Barbara L, Gruber, Stephen B, Peters, Ulrike, Gunter, Marc J, and on behalf of GECCO, CORECT
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Complementary and Integrative Health ,Digestive Diseases ,Clinical Research ,Clinical Trials and Supportive Activities ,Cancer ,Colo-Rectal Cancer ,Prevention ,Nutrition ,Prevention of disease and conditions ,and promotion of well-being ,3.3 Nutrition and chemoprevention ,Case-Control Studies ,Colorectal Neoplasms ,Dietary Supplements ,Genetic Predisposition to Disease ,Humans ,Mendelian Randomization Analysis ,Micronutrients ,Risk Factors ,Selenium ,Vitamin B 12 ,White People ,Mendelian randomization ,genes ,nutrition ,supplements ,colorectal cancer ,Engineering ,Medical and Health Sciences ,Nutrition & Dietetics - Abstract
BackgroundThe literature on associations of circulating concentrations of minerals and vitamins with risk of colorectal cancer is limited and inconsistent. Evidence from randomized controlled trials (RCTs) to support the efficacy of dietary modification or nutrient supplementation for colorectal cancer prevention is also limited.ObjectivesTo complement observational and RCT findings, we investigated associations of genetically predicted concentrations of 11 micronutrients (β-carotene, calcium, copper, folate, iron, magnesium, phosphorus, selenium, vitamin B-6, vitamin B-12, and zinc) with colorectal cancer risk using Mendelian randomization (MR).MethodsTwo-sample MR was conducted using 58,221 individuals with colorectal cancer and 67,694 controls from the Genetics and Epidemiology of Colorectal Cancer Consortium, Colorectal Cancer Transdisciplinary Study, and Colon Cancer Family Registry. Inverse variance-weighted MR analyses were performed with sensitivity analyses to assess the impact of potential violations of MR assumptions.ResultsNominally significant associations were noted for genetically predicted iron concentration and higher risk of colon cancer [ORs per SD (ORSD): 1.08; 95% CI: 1.00, 1.17; P value = 0.05] and similarly for proximal colon cancer, and for vitamin B-12 concentration and higher risk of colorectal cancer (ORSD: 1.12; 95% CI: 1.03, 1.21; P value = 0.01) and similarly for colon cancer. A nominally significant association was also noted for genetically predicted selenium concentration and lower risk of colon cancer (ORSD: 0.98; 95% CI: 0.96, 1.00; P value = 0.05) and similarly for distal colon cancer. These associations were robust to sensitivity analyses. Nominally significant inverse associations were observed for zinc and risk of colorectal and distal colon cancers, but sensitivity analyses could not be performed. None of these findings survived correction for multiple testing. Genetically predicted concentrations of β-carotene, calcium, copper, folate, magnesium, phosphorus, and vitamin B-6 were not associated with disease risk.ConclusionsThese results suggest possible causal associations of circulating iron and vitamin B-12 (positively) and selenium (inversely) with risk of colon cancer.
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- 2021
189. Thermomechanical Material Point Methods for Simulation of Burning and Melting Solids
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Kala, Victoria Alicia Trevino
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Applied mathematics ,Mathematics - Abstract
We offer three contributions of simulating visually plausible melting of solids, smoke, and solid combustion.First, we present a novel Material Point Method (MPM) discretization of surface tension forces that arise from spatially varying surface energies. These variations typically arise from surface energy dependence on temperature and/or concentration. Furthermore, since the surface energy is an interfacial property depending on the types of materials on either side of an interface, spatial variation is required for modeling the contact angle at the triple junction between a liquid, solid, and surrounding air. Our discretization is based on the surface energy itself, rather than on the associated traction condition most commonly used for discretization with particle methods. Our energy-based approach automatically captures surface gradients without the explicit need to resolve them as in traction condition-based approaches. We include an implicit discretization of thermomechanical material coupling with a novel particle-based enforcement of Robin boundary conditions associated with convective heating. Lastly, we design a particle resampling approach needed to achieve perfect conservation of linear and angular momentum with Affine-Particle-In-Cell (APIC). We show that our approach enables implicit time stepping for complex behaviors like the Marangoni effect and hydrophobicity/hydrophilicity. We demonstrate the robustness and utility of our method by simulating materials that exhibit highly diverse degrees of surface tension and thermomechanical effects, such as water, wine, and wax.Next, we present a novel deep learning approach to approximate the solution of large, sparse, symmetric, positive-definite linear systems of equations. Motivated by the conjugate gradient algorithm that iteratively selects search directions for minimizing the matrix norm of the approximation error, we design an approach that utilizes a deep neural network to accelerate convergence via data-driven improvement of the search direction at each iteration. Our method leverages a carefully chosen convolutional network to approximate the action of the inverse of the linear operator up to an arbitrary constant. We demonstrate the efficacy of our approach on spatially discretized Poisson equations, which arise in computational fluid dynamics applications, with millions of degrees of freedom. Unlike state-of-the-art learning approaches, our algorithm is capable of reducing the linear system residual to a given tolerance in a small number of iterations, independent of the problem size. Moreover, our method generalizes effectively to various systems beyond those encountered during training.Finally, we present a novel hybrid incompressible flow/material point method solver for simulating the combustion of flammable solids. Our approach utilizes a sparse grid representation of solid materials in the material point method portion of the solver and a hybrid Eulerian/FLIP solver for the incompressible portion. We utilize these components to simulate the motion of heated air and particulate matter as they interact with flammable solids, causing combustion-related damage. We include a novel particle sampling strategy to increase Eulerian flow accuracy near regions of high temperature. We also support control of the flame front propagation speed and the rate of solid combustion in an artistically directable manner. Solid combustion is modeled with temperature-dependent elastoplastic constitutive modeling. We demonstrate the efficacy of our method on various real-world three-dimensional problems, including a burning match, incense sticks, and a wood log in a fireplace.
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- 2024
190. Secular Trends in Breast Cancer Risk Among Women With HIV Initiating ART in North America
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Coburn, Sally B, Shiels, Meredith S, Silverberg, Michael J, Horberg, Michael A, Gill, M John, Brown, Todd T, Visvanathan, Kala, Connor, Avonne E, Napravnik, Sonia, Marcus, Julia L, Moore, Richard D, Mathews, W Chris, Mayor, Angel M, Sterling, Timothy R, Li, Jun, Rabkin, Charles S, D'Souza, Gyspyamber, Lau, Bryan, Althoff, Keri N, and AIDS, for the North American AIDS Cohort Collaboration on Research and Design of the International Epidemiology Databases to Evaluate
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Health Services and Systems ,Biomedical and Clinical Sciences ,Health Sciences ,Oncology and Carcinogenesis ,Prevention ,Breast Cancer ,Aging ,Sexually Transmitted Infections ,Infectious Diseases ,Women's Health ,HIV/AIDS ,Cancer ,Good Health and Well Being ,Adult ,Age Distribution ,Anti-HIV Agents ,Breast Neoplasms ,Cohort Studies ,Female ,HIV Infections ,Humans ,Incidence ,Middle Aged ,North America ,Proportional Hazards Models ,Risk Factors ,women with HIV ,breast cancer trends ,mortality ,North American AIDS Cohort Collaboration on Research and Design (NA-ACCORD) of the International Epidemiology Databases to Evaluate AIDS ,Clinical Sciences ,Public Health and Health Services ,Virology ,Clinical sciences ,Epidemiology ,Public health - Abstract
BackgroundStudies suggest lower risk of breast cancer in women with HIV versus without HIV. These estimates may be biased by lower life expectancy and younger age distribution of women with HIV. Our analysis evaluated this bias and characterized secular trends in breast cancer among women with HIV initiating antiretroviral therapy. We hypothesized breast cancer risk would increase over time as mortality decreased.SettingWomen with HIV prescribed antiretroviral therapy in the North American AIDS Cohort Collaboration on Research and Design (NA-ACCORD) from 1997 through 2016.MethodsWe estimated breast cancer hazard (cause-specific hazard ratios) and cumulative incidence accounting for competing risks (subdistribution hazard ratios) to assess changes in breast cancer risk over time. This was assessed overall (1997-2016) and within/across calendar periods. Analyses were adjusted for race/ethnicity and inverse probability weighted for cohort. Cumulative incidence was graphically assessed by calendar period and race/ethnicity.ResultsWe observed 11,587 women during 1997-2016, contributing 63 incident breast cancer diagnoses and 1,353 deaths [73,445 person-years (median follow-up = 4.5 years)]. Breast cancer cumulative incidence was 3.2% for 1997-2016. We observed no secular trends in breast cancer hazard or cumulative incidence. There were annual declines in the hazard and cumulative incidence of death (cause-specific hazard ratios and subdistribution hazard ratios: 0.89, 95% confidence interval: 0.87 to 0.91) which remained within and across calendar periods.ConclusionsThese findings contradict the hypothesis of increasing breast cancer risk with declining mortality over time among women with HIV, suggesting limited impact of changing mortality on breast cancer risk. Additional inquiry is merited as survival improves among women with HIV.
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- 2021
191. Association of Stress-Health Factors among Parkinson's Disease Patient/Caregiving-Partner Dyads.
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Phillips, Kala M, Siwik, Chelsea, Rodgers, Allison, Salmon, Paul, Litvan, Irene, Jablonski, Megan E, Filoteo, J Vincent, Cash, Elizabeth, and Sephton, Sandra E
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Anxiety ,Caregiver issues ,Parkinson’s disease ,Quality of life ,Parkinson's Disease ,Neurodegenerative ,Clinical Research ,Brain Disorders ,Mind and Body ,Neurosciences ,Mental Health ,Behavioral and Social Science ,Clinical Psychology ,Psychology ,Cognitive Sciences - Abstract
ObjectiveFew studies have explored the shared effects of Parkinson's disease (PD) within patient/caregiver dyads. To fill this gap, we compared stress-health outcomes of patients with those of caregiving-partners, examined individual stress-health associations, and explored stress-health associations within dyads.MethodA total of 18 PD patient/caregiving-partner dyads (N = 36) reported on disease-specific distress, anxiety, quality of life (QOL), and provided saliva samples for cortisol assessment. This cross-sectional, secondary analysis of a prospective pilot study used Actor-Partner Interdependence Models to test aims.ResultsPatients reported greater anxiety, poorer QOL, and demonstrated flatter cortisol slopes and higher mean bedtime cortisol compared to caregiving-partners. Both patients and caregiving-partners with greater anxiety had elevated bedtime cortisol and poorer QOL. Greater disease-specific distress in an individual was associated with higher diurnal mean cortisol in their partner.ConclusionsFindings highlight the potential for psychosocial interventions at the dyadic level to reduce shared burden and promote coping among PD patient/caregiving-partner dyads.
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- 2021
192. Genetic/Familial High-Risk Assessment: Breast, Ovarian, and Pancreatic, Version 2.2021, NCCN Clinical Practice Guidelines in Oncology.
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Daly, Mary B, Pal, Tuya, Berry, Michael P, Buys, Saundra S, Dickson, Patricia, Domchek, Susan M, Elkhanany, Ahmed, Friedman, Susan, Goggins, Michael, Hutton, Mollie L, Karlan, Beth Y, Khan, Seema, Klein, Catherine, Kohlmann, Wendy, Kurian, Allison W, Laronga, Christine, Litton, Jennifer K, Mak, Julie S, Menendez, Carolyn S, Merajver, Sofia D, Norquist, Barbara S, Offit, Kenneth, Pederson, Holly J, Reiser, Gwen, Senter-Jamieson, Leigha, Shannon, Kristen Mahoney, Shatsky, Rebecca, Visvanathan, Kala, Weitzel, Jeffrey N, Wick, Myra J, Wisinski, Kari B, Yurgelun, Matthew B, Darlow, Susan D, and Dwyer, Mary A
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Health Services and Systems ,Biomedical and Clinical Sciences ,Health Sciences ,Oncology and Carcinogenesis ,Cancer ,Digestive Diseases ,Breast Cancer ,Orphan Drug ,Pancreatic Cancer ,Genetic Testing ,Rare Diseases ,Prevention ,Genetics ,Ovarian Cancer ,Human Genome ,Aetiology ,2.1 Biological and endogenous factors ,Breast Neoplasms ,Female ,Genes ,BRCA1 ,Genes ,BRCA2 ,Genetic Counseling ,Genetic Predisposition to Disease ,Humans ,Male ,Mutation ,Ovarian Neoplasms ,Pancreatic Neoplasms ,CGC ,LCGC ,Oncology & Carcinogenesis ,Oncology and carcinogenesis ,Health services and systems - Abstract
The NCCN Guidelines for Genetic/Familial High-Risk Assessment: Breast, Ovarian, and Pancreatic focus primarily on assessment of pathogenic or likely pathogenic variants associated with increased risk of breast, ovarian, and pancreatic cancer and recommended approaches to genetic testing/counseling and management strategies in individuals with these pathogenic or likely pathogenic variants. This manuscript focuses on cancer risk and risk management for BRCA-related breast/ovarian cancer syndrome and Li-Fraumeni syndrome. Carriers of a BRCA1/2 pathogenic or likely pathogenic variant have an excessive risk for both breast and ovarian cancer that warrants consideration of more intensive screening and preventive strategies. There is also evidence that risks of prostate cancer and pancreatic cancer are elevated in these carriers. Li-Fraumeni syndrome is a highly penetrant cancer syndrome associated with a high lifetime risk for cancer, including soft tissue sarcomas, osteosarcomas, premenopausal breast cancer, colon cancer, gastric cancer, adrenocortical carcinoma, and brain tumors.
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- 2021
193. Persistent and Stable Growth Promoting Effects of Vosoritide in Children With Achondroplasia for up to 2 Years: Results From the Ongoing Phase 3 Extension Study
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Savarirayan, Ravi, Tofts, Louise, Irving, Melita, Wilcox, William, Bacino, Carlos A, Hoover-Fong, Julie, Font, Rosendo Ullot, Harmatz, Paul, Rutsch, Frank, Bober, Michael B, Polgreen, Lynda, Ginebreda, Ignacio, Mohnike, Klaus, Charrow, Joel, Hoernschemeyer, Daniel, Ozono, Keiichi, Alanay, Yasemin, Arundel, Paul, Kagami, Shoji, Yasui, Natsuo, White, Klane, Saal, Howard, Leiva-Gea, Antonio, Luna-González, Felipe, Mochizuki, Hiroshi, Basel, Donald, Porco, Dania, Jayaram, Kala, Fisheleva, Elena, Han, Lynn, and Day, Jonathan
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Abstract Objectives: Vosoritide is a potent stimulator of endochondral bone growth and is in development for the treatment of achondroplasia, the most common form of disproportionate short stature. We previously reported on a 52-week, phase 3, pivotal study that demonstrated a highly statistically significant improvement in annualized growth velocity (AGV) when vosoritide was compared to placebo in children with achondroplasia aged 5-18 years (Savarirayan et al, Lancet, 2020). This is an analysis of data after an additional 52 weeks of treatment in the ongoing phase 3 extension study. Methods: After completion of the phase 3 placebo-controlled study, 119 children were enrolled into the extension study, where they all receive open label 15 μg/kg/day vosoritide. AGV, height Z-score and body proportion ratio were analyzed to assess efficacy of vosoritide in children who were treated with vosoritide for up to 2 years. Fifty-eight continued treatment with vosoritide and 61 switched from placebo to vosoritide. Two participants on continuous vosoritide treatment discontinued before the Week 52 timepoint. Four participants on continuous vosoritide treatment and 7 participants who switched from placebo to vosoritide missed the Week 52 assessment due to Covid-19. Results: In children randomized to receive daily vosoritide, baseline mean (SD) AGV was 4.26 (1.53) cm/year. After the first 52 weeks of treatment, mean (SD) AGV was 5.67 (0.98) cm/year. Mean (SD) AGV over the second year was 5.57 (1.10) cm/year. Mean (SD) change from baseline in height Z-score improved by +0.24 (0.31) at Week 52 in the pivotal study and +0.45 (0.56) at Week 52 in the extension study. Mean (SD) upper-to-lower body segment ratio improved with a change from baseline of -0.03 (0.11) at Week 52 in the pivotal study and -0.09 (0.11) at Week 52 in the extension study. In children who switched from placebo to vosoritide after 52 weeks, baseline AGV was 4.06 (1.20) cm/year and 3.94 (1.07) cm/year after 52 weeks on placebo. In the second year, after receiving 52 weeks of vosoritide, mean AGV was 5.65 (1.47) cm/year, the mean (SD) change in height Z-score was +0.24 (0.34), and the change in upper-to-lower body segment ratio was -0.03 (0.08). No new adverse events associated with vosoritide treatment were detected with up to 2 years of continuous daily, subcutaneous treatment. Most adverse events were mild and no serious adverse events were attributed to vosoritide. The most common adverse event remains mild and transient injection site reactions. Conclusions: The effect of vosoritide administration on growth as measured through AGV and height Z-score was maintained for up to 2-years in children with achondroplasia aged 5 to 18 years, with an improvement of body proportions.
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- 2021
194. Social Innovation For Health Research (SIFHR): Development of the SIFHR Checklist
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Kpokiri, Eneyi E, Chen, Elizabeth, Li, Jingjing, Payne, Sarah, Shrestha, Priyanka, Afsana, Kaosar, Amazigo, Uche, Awor, Phyllis, de Lavison, Jean-Francois, Khan, Saqif, Mier-Alpaño, Jana, Ong, Alberto, Subhedar, Shivani, Wachmuth, Isabelle, Cuervo, Luis Gabriel, Mehta, Kala M, Halpaap, Beatrice, and Tucker, Joseph D
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Health Services and Systems ,Public Health ,Health Sciences ,Clinical Research ,Health and social care services research ,8.1 Organisation and delivery of services ,Generic health relevance ,Good Health and Well Being ,Checklist ,Delphi Technique ,Diffusion of Innovation ,Health Services Research ,Humans ,Research Design ,Social Determinants of Health ,Socioeconomic Factors ,Stakeholder Participation ,Medical and Health Sciences ,General & Internal Medicine ,Biomedical and clinical sciences ,Health sciences - Abstract
BackgroundSocial innovations in health are inclusive solutions to address the healthcare delivery gap that meet the needs of end users through a multi-stakeholder, community-engaged process. While social innovations for health have shown promise in closing the healthcare delivery gap, more research is needed to evaluate, scale up, and sustain social innovation. Research checklists can standardize and improve reporting of research findings, promote transparency, and increase replicability of study results and findings.Methods and findingsThe research checklist was developed through a 3-step community-engaged process, including a global open call for ideas, a scoping review, and a 3-round modified Delphi process. The call for entries solicited checklists and related items and was open between November 27, 2019 and February 1, 2020. In addition to the open call submissions and scoping review findings, a 17-item Social Innovation For Health Research (SIFHR) Checklist was developed based on the Template for Intervention Description and Replication (TIDieR) Checklist. The checklist was then refined during 3 rounds of Delphi surveys conducted between May and June 2020. The resulting checklist will facilitate more complete and transparent reporting, increase end-user engagement, and help assess social innovation projects. A limitation of the open call was requiring internet access, which likely discouraged participation of some subgroups.ConclusionsThe SIFHR Checklist will strengthen the reporting of social innovation for health research studies. More research is needed on social innovation for health.
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- 2021
195. Heterogenous Networks: From Small Cells to 5G NR-U
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Sathya, Vanlin, Kala, Srikant Manas, and Naidu, Kalpana
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- 2023
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196. Concise review of green algal genus Monostroma Thuret
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Kaur, Manpreet, Kala, Swarna, Parida, Aseema, and Bast, Felix
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- 2023
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197. Early-Life Intervention of Lactoferrin and Probiotic in Suckling Piglets: Effects on Immunoglobulins, Intestinal Integrity, and Neonatal Mortality
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Sarkar, Varun Kumar, De, Ujjwal Kumar, Kala, Anju, Verma, Ashok Kumar, Chauhan, Anuj, Paul, Babul Rudra, Soni, Srishti, Gandhar, Jitendra Singh, Chaudhuri, Pallab, Patra, Manas Kumar, Eregowda, Chethan Gollahalli, and Gaur, Gyanendra Kumar
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- 2023
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198. Locality-constrained continuous place recognition for SLAM in extreme conditions
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Yadav, Rohit, Pani, Vishal, Mishra, Arpit, Tiwari, Naman, and Kala, Rahul
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- 2023
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199. Deciphering colorectal cancer genetics through multi-omic analysis of 100,204 cases and 154,587 controls of European and east Asian ancestries
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Fernandez-Rozadilla, Ceres, Timofeeva, Maria, Chen, Zhishan, Law, Philip, Thomas, Minta, Schmit, Stephanie, Díez-Obrero, Virginia, Hsu, Li, Fernandez-Tajes, Juan, Palles, Claire, Sherwood, Kitty, Briggs, Sarah, Svinti, Victoria, Donnelly, Kevin, Farrington, Susan, Blackmur, James, Vaughan-Shaw, Peter, Shu, Xiao-ou, Long, Jirong, Cai, Qiuyin, Guo, Xingyi, Lu, Yingchang, Broderick, Peter, Studd, James, Huyghe, Jeroen, Harrison, Tabitha, Conti, David, Dampier, Christopher, Devall, Mathew, Schumacher, Fredrick, Melas, Marilena, Rennert, Gad, Obón-Santacana, Mireia, Martín-Sánchez, Vicente, Moratalla-Navarro, Ferran, Oh, Jae Hwan, Kim, Jeongseon, Jee, Sun Ha, Jung, Keum Ji, Kweon, Sun-Seog, Shin, Min-Ho, Shin, Aesun, Ahn, Yoon-Ok, Kim, Dong-Hyun, Oze, Isao, Wen, Wanqing, Matsuo, Keitaro, Matsuda, Koichi, Tanikawa, Chizu, Ren, Zefang, Gao, Yu-Tang, Jia, Wei-Hua, Hopper, John, Jenkins, Mark, Win, Aung Ko, Pai, Rish, Figueiredo, Jane, Haile, Robert, Gallinger, Steven, Woods, Michael, Newcomb, Polly, Duggan, David, Cheadle, Jeremy, Kaplan, Richard, Maughan, Timothy, Kerr, Rachel, Kerr, David, Kirac, Iva, Böhm, Jan, Mecklin, Lukka-Pekka, Jousilahti, Pekka, Knekt, Paul, Aaltonen, Lauri, Rissanen, Harri, Pukkala, Eero, Eriksson, Johan, Cajuso, Tatiana, Hänninen, Ulrika, Kondelin, Johanna, Palin, Kimmo, Tanskanen, Tomas, Renkonen-Sinisalo, Laura, Zanke, Brent, Männistö, Satu, Albanes, Demetrius, Weinstein, Stephanie, Ruiz-Narvaez, Edward, Palmer, Julie, Buchanan, Daniel, Platz, Elizabeth, Visvanathan, Kala, Ulrich, Cornelia, Siegel, Erin, Brezina, Stefanie, Gsur, Andrea, Campbell, Peter, Chang-Claude, Jenny, Hoffmeister, Michael, Brenner, Hermann, Slattery, Martha, Potter, John, Tsilidis, Konstantinos, Schulze, Matthias, Gunter, Marc, Murphy, Neil, Castells, Antoni, Castellví-Bel, Sergi, Moreira, Leticia, Arndt, Volker, Shcherbina, Anna, Stern, Mariana, Pardamean, Bens, Bishop, Timothy, Giles, Graham, Southey, Melissa, Idos, Gregory, McDonnell, Kevin, Abu-Ful, Zomoroda, Greenson, Joel, Shulman, Katerina, Lejbkowicz, Flavio, Offit, Kenneth, Su, Yu-Ru, Steinfelder, Robert, Keku, Temitope, van Guelpen, Bethany, Hudson, Thomas, Hampel, Heather, Pearlman, Rachel, Berndt, Sonja, Hayes, Richard, Martinez, Marie Elena, Thomas, Sushma, Corley, Douglas, Pharoah, Paul, Larsson, Susanna, Yen, Yun, Lenz, Heinz-Josef, White, Emily, Li, Li, Doheny, Kimberly, Pugh, Elizabeth, Shelford, Tameka, Chan, Andrew, Cruz-Correa, Marcia, Lindblom, Annika, Hunter, David, Joshi, Amit, Schafmayer, Clemens, Scacheri, Peter, Kundaje, Anshul, Nickerson, Deborah, Schoen, Robert, Hampe, Jochen, Stadler, Zsofia, Vodicka, Pavel, Vodickova, Ludmila, Vymetalkova, Veronika, Papadopoulos, Nickolas, Edlund, Chistopher, Gauderman, William, Thomas, Duncan, Shibata, David, Toland, Amanda, Markowitz, Sanford, Kim, Andre, Chanock, Stephen, van Duijnhoven, Franzel, Feskens, Edith, Sakoda, Lori, Gago-Dominguez, Manuela, Wolk, Alicja, Naccarati, Alessio, Pardini, Barbara, FitzGerald, Liesel, Lee, Soo Chin, Ogino, Shuji, Bien, Stephanie, Kooperberg, Charles, Li, Christopher, Lin, Yi, Prentice, Ross, Qu, Conghui, Bézieau, Stéphane, Tangen, Catherine, Mardis, Elaine, Yamaji, Taiki, Sawada, Norie, Iwasaki, Motoki, Haiman, Christopher, Le Marchand, Loic, Wu, Anna, Qu, Chenxu, McNeil, Caroline, Coetzee, Gerhard, Hayward, Caroline, Deary, Ian, Harris, Sarah, Theodoratou, Evropi, Reid, Stuart, Walker, Marion, Ooi, Li Yin, Moreno, Victor, Casey, Graham, Gruber, Stephen, Tomlinson, Ian, Zheng, Wei, Dunlop, Malcolm, Houlston, Richard, and Peters, Ulrike
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- 2023
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200. Circulating vitamin D and breast cancer risk: an international pooling project of 17 cohorts
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Visvanathan, Kala, Mondul, Alison M., Zeleniuch-Jacquotte, Anne, Wang, Molin, Gail, Mitchell H., Yaun, Shiaw-Shyuan, Weinstein, Stephanie J., McCullough, Marjorie L., Eliassen, A. Heather, Cook, Nancy R., Agnoli, Claudia, Almquist, Martin, Black, Amanda, Buring, Julie E., Chen, Chu, Chen, Yu, Clendenen, Tess, Dossus, Laure, Fedirko, Veronika, Gierach, Gretchen L., Giovannucci, Edward L., Goodman, Gary E., Goodman, Marc T., Guénel, Pascal, Hallmans, Göran, Hankinson, Susan E., Horst, Ronald L., Hou, Tao, Huang, Wen-Yi, Jones, Michael E., Joshu, Corrine E., Kaaks, Rudolf, Krogh, Vittorio, Kühn, Tilman, Kvaskoff, Marina, Lee, I-Min, Mahamat-Saleh, Yahya, Malm, Johan, Manjer, Jonas, Maskarinec, Gertraud, Millen, Amy E., Mukhtar, Toqir K., Neuhouser, Marian L., Robsahm, Trude E., Schoemaker, Minouk J., Sieri, Sabina, Sund, Malin, Swerdlow, Anthony J., Thomson, Cynthia A., Ursin, Giske, Wactawski-Wende, Jean, Wang, Ying, Wilkens, Lynne R., Wu, Yujie, Zoltick, Emilie, Willett, Walter C., Smith-Warner, Stephanie A., and Ziegler, Regina G.
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- 2023
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