430 results on '"Okawa, Katsuya"'
Search Results
152. The development of functional topography in the corticorubral pathway of the cat
- Author
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Song, Wen-Jie, primary, Okawa, Katsuya, additional, Ohno, Tohru, additional, Kanda, Masanori, additional, and Murakami, Fujio, additional
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- 1992
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153. Tudor domain containing 7(Tdrd7) is essential for dynamic ribonucleoprotein (RNP) remodeling of chromatoid bodies during spermatogenesis.
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Tanaka, Takashi, Hosokawa, Mihoko, Vagin, Vasily V., Reuter, Michael, Hayashi, Eri, Mochizuki, Ayako L., Kitamura, Kouichj, Yamanaka, Hidenori, Kondoh, Gen, Okawa, Katsuya, Kuramochi-Miyagawa, Satomi, Nakano, Toru, Sachidanandam, Ravi, Hannon, Gregory J., Pillai, Ramesh S., Nakatsuji, Norio, and Chuma, Shinichiro
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GERM cells ,NUCLEOPROTEINS ,SPERMATOGENESIS ,GERMINAL layers ,MEIOSIS ,MITOCHONDRIAL membranes - Abstract
In the male germline in mammals, chromatoid bodies, a specialized assembly of cytoplasmic ribonucleoprotein (RNP), are structurally evident during meiosis and haploidgenesis, but their developmental origin and regulation remain elusive. The tudor domain containing proteins constitute a conserved class of chromatoid body components. We show that tudor domain containing 7 (Tdrd7), the deficiency of which causes male sterility and age-related cataract (as well as glaucoma), is essential for haploid spermatid development and defines, in concert with Tdrd6, key biogenesis processes of chromatoid bodies. Single and double knockouts of Tdrd1 and Tdrd6 demonstrated that these spermiogenic tudor genes orchestrate developmental programs for ordered remodeling of chromatoid bodies, including the initial establishment, subsequent RNP fusion with ubiquitous processing bodies/GW bodies and later structural maintenance. Tdrd7 suppresses LINEI retrotransposons independently of piwi-interacting RNA (piRNA) biogenesis wherein Tdrd1 and Tdrd9 operate, indicating that distinct Tdrd pathways act against retrotransposons in the male germline. Tdrd6, in contrast, does not affect retrotransposons but functions at a later stage of spermiogenesis when chromatoid bodies exhibit aggresome-like properties. Our results delineate that chromatoid bodies assemble as an integrated compartment incorporating both germline and ubiquitous features as spermatogenesis proceeds and that the conserved tudor family genes act as master regulators of this unique RNP remodeling, which is genetically linked to the male germline integrity in mammals. [ABSTRACT FROM AUTHOR]
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- 2011
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154. Ttyh1, a Ca2+-binding protein localized to the endoplasmic reticulum, is required for early embryonic development.
- Author
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Kumada, Tomohiro, Yamanaka, Yasunari, Kitano, Ayumi, Shibata, Minoru, Awaya, Tomonari, Kato, Takeo, Okawa, Katsuya, Abe, Takaya, Oshima, Naoko, Nakahata, Tatsutoshi, and Heike, Toshio
- Abstract
Using comprehensive genetic studies on neuronal stem/progenitors cells through genome-wide screening with oligonucleotide arrays, we identified an endoplasmic reticulum (ER) -resident protein, Tweety homologue 1 ( ttyh1). Ttyh1 encodes a glycosylated protein composed of five predicted transmembrane segments and a C-terminus that is enriched in negatively charged residues capable of Ca
2+ binding. Ttyh1-containing membranes changed to segmented tubuloreticular structures during mitosis, suggesting that the ER-containing Ttyh1 could be responsible for Ca2+ sequestration and Ca2+ concentration regulation during mitosis. Ttyh1 inactivation in mice resulted in early embryonic lethality before organization of the nervous system, revealing that ttyh1 is essential in murine embryonic development. Our findings indicate that Ttyh1 plays an indispensable role during mitosis in early embryogenesis, possibly by maintaining Ca2+ homeostasis in the ER. Developmental Dynamics 239:2233-2245, 2010. © 2010 Wiley-Liss, Inc. [ABSTRACT FROM AUTHOR]- Published
- 2010
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155. Ca2+-dependent release of Munc18-1 from presynaptic mGluRs in short-term facilitation.
- Author
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Nakajim, Yoshiaki, Mochida, Sumiko, Okawa, Katsuya, and Nakanishi, Shigetada
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NEUROTRANSMITTERS ,HUMAN information processing ,CENTRAL nervous system ,GLUTAMIC acid ,CALMODULIN ,SYNAPTIC vesicles ,NEUROPLASTICITY - Abstract
Short-term synaptic facilitation plays an important role in information processing in the central nervous system. Although the crucial requirement of presynaptic Ca
2+ in the expression of this plasticity has been known for decades, the molecular mechanisms underlying the plasticity remain controversial. Here, we show that presynaptic metabotropic glutamate receptors (mGluRs) bind and release Munc18-1 (also known as rbSec1/nSec1), an essential protein for synaptic transmission, in a Ca2+ -dependent manner, whose actions decrease and increase synaptic vesicle release, respectively. We found that mGluR4 bound Munc18-1 with an EC50 for Ca2+ of 168 nM, close to the resting Ca2+ concentration, and that the interaction was disrupted by Ca2+ -activated calmodulin (CaM) at higher concentrations of Ca2+ . Consistently, the Munc18-1-interacting domain of mGluR4 suppressed both dense-core vesicle secretion from permeabilized PC12 cells and synaptic transmission in neuronal cells. Furthermore, this domain was sufficient to induce paired-pulse facilitation. Obviously, the role of mGluR4 in these processes was independent of its classical function of activation by glutamate. On the basis of these experimental data, we propose the following model: When neurons are not active, Munc18-1 is sequestered by mGluR4, and therefore the basal synaptic transmission is kept tow. After the action potential, the increase in the Ca2+ level activates CaM, which in turn liberates Munc18-1 from mGluR4, causing short-term synaptic facilitation. Our findings unite and provide a new insight into receptor signaling and vesicular transport, which are pivotal activities involved in a variety of cellular processes. [ABSTRACT FROM AUTHOR]- Published
- 2009
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156. mDia2 Shuttles between the Nucleus and the Cytoplasm through the lmportin-α/β- and CRM1-mediated Nuclear Transport Mechanism.
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Miki, Takashi, Okawa, Katsuya, Sekimoto, Toshihiro, Yoneda, Yoshihiro, Watanabet, Sadanori, Ishizaki, Toshimasa, and Narumiya, Shuh
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NUCLEAR membranes , *HOMOLOGY (Biology) , *NUCLEATION , *POLYMERIZATION , *RNA synthesis , *BIOLOGICAL interfaces , *CYTOPLASM - Abstract
Mammalian homolog of Drosophila diaphanous (mDia) consisting of three isoforms, mDia1, mDia2, and mDia3, is an effector of Rho GTPases that catalyzes actin nucleation and polymerization. Although the mDia actions on actin dynamics in the cytoplasm have been well studied, whether mDia accumulates and functions in the nucleus remains largely unknown. Given the presence of actin and actin-associated proteins in the nucleus, we have examined nuclear localization of mDia iso-forms. We expressed each of mDia isoforms as a green fluorescent protein fusion protein and examined their localization. Although all the mDia isoforms were localized predominantly in the cytoplasm under the steady-state conditions, mDia2 and not mDia1 or mDia3 accumulated extensively in the nucleus upon treatment with leptomycin B (LMB), an inhibitor of CRM1-dependent nuclear export. The LMB-induced nuclear accumulation was confirmed for endogenous mDia2 by using an antibody specific to mDia2. Studies using green fluorescent protein fusions of various truncation mDia2 mutants and point mutants of some of these proteins identified a functional nuclear localization signal in the N terminus of mDia2 and at least one functional nuclear export signal in the C terminus. The nuclear localization signal of mDia2 bound to importin-α and was imported into the nucleus by importin-α/β complex in an in vitro transport assay. Consistently, depletion of importin-β with RNA interference suppressed the LMB-induced nuclear localization of endogenous mDia2. These results suggest that mDia2 continuously shuttles between the nucleus and the cytoplasm using specific nuclear transport machinery composing of importin-α/β and CRM1. [ABSTRACT FROM AUTHOR]
- Published
- 2009
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157. Functional map of the corticorubral projection in newborn kittens
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Song, Wen-Jie, primary, Okawa, Katsuya, additional, Ohno, Tooru, additional, and Murakami, Fujio, additional
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- 1991
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158. The exocyst complex binds the small GTPase RalA to mediate filopodia formation.
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Sugihara, Kazuhiro, Asano, Shiro, Tanaka, Kenichi, Iwamatsu, Akihiro, Okawa, Katsuya, and Ohta, Yasutaka
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GUANOSINE triphosphatase ,ACTIN - Abstract
The Ras-related small GTPase RalA is involved in controlling actin cytoskeletal remodelling and vesicle transport in mammalian cells. We identified the mammalian homologue of Sec5, a subunit of the exocyst complex determining yeast cell polarity, as a specific binding partner for GTP-ligated RalA. Inhibition of RalA binding to Sec5 prevents filopod production by tumor necrosis factor-α (TNF-α) and interleukin-1 (IL-1) and by activated forms of RalA and Cdc42, signalling intermediates downstream of these inflammatory cytokines. We propose that the RalA?exocyst complex interaction integrates the secretory and cytoskeletal pathways. [ABSTRACT FROM AUTHOR]
- Published
- 2002
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159. Nitric Oxide Inactivates Glyoxalase I in Cooperation with Glutathione.
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Mitsumoto, Atsushi, Kim, Kwi-Ryeon, Oshima, Genichiro, Kunimoto, Manabu, Okawa, Katsuya, Iwamatsu, Akihiro, and Nakagawa, Yasuhito
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ENDOTHELIAL cells ,GLYOXALASE ,ENDOTHELIUM ,NITRIC oxide ,GLUTATHIONE - Abstract
We previously found that glyoxalase I (Glo I) is inactivated upon exposure of human endothelial cells to extracellular nitric oxide (NO), and this event correlates with an increase in its pI on two-dimensional gels. In this study, we demonstrate that NO can modulate Glo I activity in cooperation with cellular glutathione (GSH). Severe depletion of intracellular GSH prevents the inactivation of Glo I in response to NO, although such depletion enhances the inactivation of glyceraldehyde-3-phosphate dehydrogenase (G3PDH), a well-known enzyme susceptible to NO-induced oxidation. S-Nitrosoglu-tathione (GSNO), an adduct of GSH and NO, lowers the activity of purified human Glo I, while S-nitrosocysteine (CysNO) inactivates the enzyme only in the presence of GSH. This indicates that a dysfunction in Glo I would require the formation of GSNO in situ. Competitive inhibitors of Glo I, S-(4-bromobenzyl)glutathione and its membrane-permeating form, completely abolish the NO action in vitro and inside cells, respectively. Taken together, these results reveal that Glo I can interact directly with GSNO, and that the interaction converts Glo I into an inactive form. Moreover, the data suggest that the substrate recognition site of Glo I might be involved in the interaction with GSNO. [ABSTRACT FROM AUTHOR]
- Published
- 2000
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160. Specific antibodies to moesin, a membrane-cytoskeleton linker protein, are frequently detected in patients with acquired aplastic anemia
- Author
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Takamatsu, Hiroyuki, Feng, Xingmin, Chuhjo, Tatsuya, Lu, Xuzhang, Sugimori, Chiharu, Okawa, Katsuya, Yamamoto, Miyuki, Iseki, Shoichi, and Nakao, Shinji
- Abstract
To identify novel autoantibodies in acquired aplastic anemia (AA), we screened the sera of patients with AA possessing small populations of paroxysmal nocturnal hemoglobinuria (PNH)–type cells for the presence of antibodies (Abs) which recognize proteins derived from a leukemia cell line, UT-7. Immunoblotting using proteins derived from lysates or culture supernatants of UT-7 cells revealed the presence of IgG Abs specific to an 80-kDa protein. Peptide mass fingerprinting identified this 80-kDa protein as moesin. Enzyme-linked immunosorbent assay (ELISA) using recombinant moesin showed high titers of antimoesin Abs in 25 (37%) of 67 patients with AA. Moesin was secreted from several myeloid leukemia cell lines other than UT-7, such as OUN-1 and K562, as an exosomal protein. The presence of antimoesin Abs was significantly correlated with the presence of PNH-type cells and antidiazepam-binding inhibitor-related protein-1 (DRS-1) Abs. Patients with AA that did not show any of these 3 markers tended to respond poorly to immunosuppressive therapy. These findings suggest that a B-cell response to moesin, possibly derived from hematopoietic cells, frequently occurs in patients with AA and that detection of antimoesin Abs in combination with other markers may be useful in diagnosing immune pathophysiology in patients with AA.
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- 2007
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161. Katanin, the microtubule-severing ATPase, is concentrated at centrosomes
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McNally, Francis J., Okawa, Katsuya, Iwamatsu, Akihiro, and Vale, Ronald D.
- Abstract
The assembly and function of the mitotic spindle involve specific changes in the dynamic properties of microtubules. One such change results in the poleward flux of tubulin in which spindle microtubules polymerize at their kinetochore-attached plus ends while they shorten at their centrosome-attached minus ends. Since free microtubule minus ends do not depolymerize in vivo, the poleward flux of tubulin suggests that spindle microtubules are actively disassembled at or near their centrosomal attachment points. The microtubule-severing ATPase, katanin, has the ability actively to sever and disassemble microtubules and is thus a candidate for the role of a protein mediating the poleward flux of tubulin. Here we determine the subcellular localization of katanin by immunofluorescence as a pre-liminary step in determining whether katanin mediates the poleward flux of tubulin. We find that katanin is highly concentrated at centrosomes throughout the cell cycle. Katanin’s localization is different from that of γ-tubulin in that microtubules are required to maintain the centrosomal localization of katanin. Direct comparison of the localization of katanin and γ-tubulin reveals that katanin is localized in a region surrounding the γ-tubulin-containing pericentriolar region in detergent-extracted mitotic spindles. The centrosomal localization of katanin is consistent with the hypothesis that katanin mediates the disassembly of microtubule minus ends during poleward flux.
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- 1996
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162. Mammalian carboxylesterase (CES) releases GPI-anchored proteins from the cell surface upon lipid raft fluidization.
- Author
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Orihashi, Kaoru, Tojo, Hiromasa, Okawa, Katsuya, Tashima, Yuko, Morita, Takashi, and Kondoh, Gen
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CARBOXYLESTERASES , *LIPID rafts , *CELL membranes , *BIOTRANSFORMATION (Metabolism) , *PRODRUGS , *XENOBIOTICS , *ESTERASES , *ALKALINE phosphatase - Abstract
Mammalian carboxylesterase (CES) is well known as a biotransformation enzyme for prodrugs and xenobiotics. Here, we purified CES as a GPI-anchored protein (GPI-AP)-releasing factor (GPIase) that releases such protein from the cell surface. All five isoforms of CES showed this activity to various degrees. When the serine residue of the catalytic triad for esterase was replaced by alanine, esterase activity was completely disrupted, while full GPIase activity remained, suggesting that these two activities are exhibited via different mechanisms. CES6, a new class of mammalian CES, exhibited the highest GPIase activity and released specific GPI-APs from the cell surface after lipid raft fluidization. The released product contained a GPI component, indicating that GPI-AP was released by cleavage in GPI. These results revealed for the first time that CES recognizes and catalyzes macromolecule GPI-AP as well as small molecules. [ABSTRACT FROM AUTHOR]
- Published
- 2012
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163. SEL1L Protein Critically Determines the Stability of the HRD1 -SEL1L Endoplasmic Reticulum-associated Degradation (ERAD) Complex to Optimize the Degradation Kinetics of ERAD Substrates.
- Author
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lida, Yasutaka, Fujimori, Tsutomu, Okawa, Katsuya, Nagata, Kazuhiro, Wada, Ikuo, and Hosokawa, Nobuko
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ENDOPLASMIC reticulum , *TRYPSIN inhibitors , *GENETIC transformation , *NUCLEIC acids , *PROTEINS - Abstract
The mammalian HRD1-SEL1L complex provides a scaffold for endoplasmic reticulum (ER)-associated degradation (ERAD), thereby connecting luminal substrates for ubiquitination at the cytoplasmic surface after their retrotranslocation through the endoplasmic reticulum membrane. In this study the stability of the mammalian HRD1-SEL1L complex was assessed by performing siRNA-mediated knockdown of each of its components. Although endogenous SEL1L is a long-lived protein, the half-life of SEL1L was greatly reduced when HRD1 is silenced. Conversely, transiently expressed SEL1L was rapidly degraded but was stabilized when HRD1 was coexpressed. This was in contrast to the yeast Hrd1p-Hrd3p, where Hrd1p is destabilized by the depletion of Hrd3p, the SEL1L homologue. Endogenous HRD1-SEL1L formed a large ERAD complex (Complex I) associating with numerous ERAD components including ERAD lectin OS-9, membrane-spanning Derlin-1/2, VIMP, and Herp, whereas transiently expressed HRD1-SEL1L formed a smaller complex (Complex II) that was associated with OS-9 but not with Derlin-1/2, VIMP, or Herp. Despite its lack of stable association with the latter components, Complex II supported the retrotranslocation and degradation of model ERAD substrates αl-antitrypsin null Hong-Kong (NHK) and its variant NHK-QQQ lacking the N-glycosylation sites. NHK-QQQ was rapidly degraded when SEL1L was transiently expressed, whereas the simultaneous transfection of HRD1 diminished that effect. SEL1L unassociated with HRD1 was degraded by the ubiquitin-proteasome pathway, which suggests the involvement of a ubiquitin-ligase other than HRD1 in the rapid degradation of both SEL1L and NHK-QQQ. These results indicate that the regulation of the stability and assembly of the HRD1-SEL1L complex is critical to optimize the degradation kinetics of ERAD substrates. [ABSTRACT FROM AUTHOR]
- Published
- 2011
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164. Identification of serum proteins that bind with S100A8, S100A9 and S100A8/A9: Clinical significance of using proteins for monitoring the postoperative condition of liver recipients
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Namura, Tomoyo, Arai, Satoshi, Okawa, Katsuya, Koike, Akiko, Yamada, Sachiko, Saita, Naoko, Nagae, Akiko, Itoh, Hiroshi, Totani, Masayuki, Uemoto, Shinji, and Ikemoto, Masaki
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FIBRONECTINS , *DISSEMINATED intravascular coagulation , *INFLAMMATION , *NEUTROPHILS , *C-reactive protein , *ENZYME-linked immunosorbent assay , *STREPTAVIDIN , *MACROPHAGES - Abstract
Abstract: Background: Serum proteins that non-specifically bind with human S100A8/A9 (h-S100A8/A9) have been proposed. Our aim was to isolate and identify these proteins, and verify their clinical significance for monitoring the postoperative condition of liver recipients, and further to discuss the transportation of human fibronectin (h-FN) with h-S100A8/A9 and its functional role in vivo. Methods: To isolate the serum proteins, recombinant human S100A8, S100A9 and S100A8/A9 affinity columns were used. Proteins were identified by mass spectrometry. Two enzyme-linked immunosorbent assays (ELISA) were used to measure h-S100A8/A9 and h-FN in the sera of liver recipients. Flow cytometry was employed to detect h-S100A8/A9 and h-FN on immunological cells. Western blotting was used to confirm serum constituents using antibodies specific to each constituent. Results: One of the proteins was identified with h-FN, and its fluctuation pattern in the serum of the recipient was in contrast to that of CRP. Flow cytometry showed a positive reaction for h-S100A8/A9 and h-FN on neutrophils and monocytes, indicating that both proteins exist on these cells. Conclusions: The h-FN could be transported with S100A8/A9 in blood and/or on immunological cells, and effectively prevent further attack by various internal oxidants or repair damaged liver tissue in vivo. [ABSTRACT FROM AUTHOR]
- Published
- 2010
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165. Heat-shock protein 105 interacts with and suppresses aggregation of mutant Cu/Zn superoxide dismutase: clues to a possible strategy for treating ALS.
- Author
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Yamashita, Hirofumi, Kawamata, Jun, Okawa, Katsuya, Kanki, Rie, Nakamizo, Tomoki, Hatayama, Takumi, Yamanaka, Koji, Takahashi, Ryosuke, and Shimohama, Shun
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GENETIC mutation , *GENES , *COPPER , *ZINC , *SUPEROXIDE dismutase , *AMYOTROPHIC lateral sclerosis , *HEAT shock proteins , *LABORATORY mice - Abstract
A dominant mutation in the gene for copper-zinc superoxide dismutase (SOD1) is the most frequent cause of the inherited form of amyotrophic lateral sclerosis. Mutant SOD1 provokes progressive degeneration of motor neurons by an unidentified acquired toxicity. Exploiting both affinity purification and mass spectrometry, we identified a novel interaction between heat-shock protein 105 (Hsp105) and mutant SOD1. We detected this interaction both in spinal cord extracts of mutant SOD1G93A transgenic mice and in cultured neuroblastoma cells. Expression of Hsp105, which is found in mouse motor neurons, was depressed in the spinal cords of SOD1G93A mice as disease progressed, while levels of expression of two other heat-shock proteins, Hsp70 and Hsp27, were elevated. Moreover, Hsp105 suppressed the formation of mutant SOD1-containing aggregates in cultured cells. These results suggest that techniques that raise levels of Hsp105 might be promising tools for alleviation of the mutant SOD1 toxicity. [ABSTRACT FROM AUTHOR]
- Published
- 2007
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166. The Reversion-inducing Cysteine-rich Protein with Kazal Motifs (RECK) Interacts with Membrane Type 1 Matrix Metalloproteinase and CD1 3/Aminopeptidase N and Modulates Their Endocytic Pathways.
- Author
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Miki, Takao, Takegami, Yujiro, Okawa, Katsuya, Muraguchi, Teruyuki, Noda, Makoto, and Takahashi, Chiaki
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PROTEINS , *METALLOPROTEINASES , *AMINOPEPTIDASES , *CELL membranes , *ULTRACENTRIFUGATION , *ENZYMES , *CHOLESTEROL - Abstract
The reversion-inducing cysteine-rich protein with Kazal motifs (RECK) is anchored to the cell surface via glycosylphos- phatidylinositol. This molecule antagonizes the function of membrane type 1 matrix metalloproteinase (MT1-MMP) to promote proMMP-2 maturation. Here, we attempt to clarify the mechanism underlying RECK functions. First, we found that RECK forms a complex with MT1-MMP and inhibits its proteolytic activity. Notably, RECK increases the amount of MT1-MMP that associates with detergent-resistant membranes during sucrose gradient ultracentrifugation. Furthermore, perturbation of membrane cholesterol significantly affected the function of RECK in suppressing MT1-MMP function. These findings indicate that RECK possibly regulates MT1-MMP function by modulating its behavior on the cell surface as well as by enzymatic action; this prompted us to find another molecule whose behavior in detergent-resistant membranes is influenced by RECK. Subsequently, we found that RECK interacts with CD13/aminopeptidase N. Further, we found that RECK inhibits the proteolytic activity of CD13 in a cholesterol perturbation-sensitive manner. Finally, we examined whether RECK influences the behavior of MT1-MMP and CD13 during their internalization from the cell surface. In the absence of RECK, MT1-MMP and CD13 were internalized along with the markers of clathrin- or caveolae-dependent endocytosis. However, interestingly, in the presence of RECK these molecules were internalized preferentially with an endocytic marker that is neither clathrin- nor caveolae-dependent, indicating that RECK modulates endocytic pathways of MT1-MMP and CD13. This modulation was correlated with the accelerated internalization and decay of MT1-MMP and CD13. This study unveils the novel function and target molecules of RECK. [ABSTRACT FROM AUTHOR]
- Published
- 2007
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167. A neurosphere-derived factor, cystatin C, supports differentiation of ES cells into neural stem cells.
- Author
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Kato, Takeo, Heike, Toshio, Okawa, Katsuya, Haruyama, Munetada, Shiraishi, Kazuhiro, Yoshimoto, Momoko, Nagato, Masako, Shibata, Minoru, Kumada, Tomohiro, Yamanaka, Yasunari, Hattori, Haruo, and Nakahata, Tatsutoshi
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EMBRYONIC stem cells , *CELL differentiation , *NEURAL stem cells , *SERUM , *CELL proliferation - Abstract
Although embryonic stem (ES) cells are capable of unlimited proliferation and pluripotent differentiation, effective preparation of neural stem cells from ES cells are not achieved. Here, we have directly generated under the coculture with dissociated primary neurosphere cells in serum-free medium and the same effect was observed when ES cells were cultured with conditioned medium of primary neurosphere culture (CMPNC). ES-neural stem cells (NSCs) could proliferate for more than seven times and differentiate into neurons, astrocytes, and oligodendrocytes in vitro and in vivo. The responsible molecule in CMPNC was confirmed by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry, which turned out to be cystatin C. Purified cystatin C in place of the CMPNC could generate E5-NSCs efficiently with self-renewal and multidifferentiation potentials. These results reveal the validity of cystatin C for generating NSC5 from ES cells. [ABSTRACT FROM AUTHOR]
- Published
- 2006
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168. Proteomic analysis of hematopoietic stem cell-like fractions in leukemic disorders.
- Author
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Ota, Jun, Yamashita, Yoshihiro, Okawa, Katsuya, Kisanuki, Hiroyuki, Fujiwara, Shin-ichiro, Ishikawa, Madoka, Lim Choi, Young, Ueno, Shuichi, Ohki, Ruri, Koinuma, Koji, Wada, Tomoaki, Compton, Duane, Kadoya, Toshihiko, and Mano, Hiroyuki
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GENETIC markers , *DNA microarrays , *HEMATOLOGY , *MESSENGER RNA , *MASS spectrometry - Abstract
DNA microarray analysis has been applied to identify molecular markers of human hematological malignancies. However, the relatively low correlation between the abundance of a given mRNA and that of the encoded protein makes it important to characterize the protein profile directly, or 'proteome,' of malignant cells in addition to the 'transcriptome.' To identify proteins specifically expressed in leukemias, here we isolated AC133+ hematopoietic stem cell-like fractions from the bone marrow of 13 individuals with various leukemic disorders, and compared their protein profiles by two-dimensional electrophoresis. A total of 11 differentially expressed protein spots corresponding to 10 independent proteins were detected, and peptide fingerprinting combined with mass spectrometry of these proteins revealed them to include NuMA (nuclear protein that associates with the mitotic apparatus), heat shock proteins, and redox regulators. The abundance of NuMA in the leukemic blasts was significantly related to the presence of complex karyotype anomalies. Conditional expression of NuMA in a mouse myeloid cell line resulted in the induction of aneuploidy, cell cycle arrest in G2-M?phases, and apoptosis. These results demonstrate the potential of proteome analysis with background-matched cell fractions obtained from fresh clinical specimens to provide insight into the mechanism of human leukemogenesis.Oncogene (2003) 22, 5720-5728. doi:10.1038/sj.onc.1206855 [ABSTRACT FROM AUTHOR]
- Published
- 2003
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169. Plasmacytoid dendritic cells: from specific surface markers to specific cellular functions1<FN ID="FN1"><NO>1</NO>Andrezej Dzionek, Yoshimasa Inagaki, Katsuya Okawa, and Jun Nagafune contributed equally to this work. Yasunori Yamaguchi and Ju¨rgen Schmitz share senior authorship for this work.</FN>
- Author
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Dzionek, Andrzej, Inagaki, Yoshimasa, Okawa, Katsuya, Nagafune, Jun, Röck, J.ürgen, Sohma, Yoshiaki, Winkels, Gregor, Zysk, Monika, Yamaguchi, Yasunori, and Schmitz, J.ürgen
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DENDRITIC cells , *MONOCLONAL antibodies , *ANTIGENS , *SYSTEMIC lupus erythematosus , *INTERFERONS - Abstract
We have recently described a panel of monoclonal antibodies (mAb), that recognize two novel leukocyte surface antigens, BDCA-2 and BDCA-4. BDCA-2 is a novel type II C-type lectin specifically expressed by plasmacytoid dendritic cells (PDCs) that can internalize antigen for presentation to T cells. Furthermore, signaling via BDCA-2 may play a role in switching from interferon (IFN)-α/β-controlled to interleukin (IL)-12-controlled immune response pathways, as triggering of BDCA-2 potently inhibits secretion of IFN-α/β by PDCs and thereby promotes IL-12 p70 production in PDCs and other cells. Viruses may exploit this switch to escape innate antiviral immunity, but it may be beneficial for patients with systemic lupus erythematosus (SLE) if induced, for instance by anti BDCA-2 mAb treatment. BDCA-4 is shown here to be identical to neuropilin-1 (NP-1), a neuronal receptor for the axon guidance factors belonging to the class-3 semaphorin subfamily, and a receptor on endothelial and tumor cells for vascular endothelial growth factor (VEGF-A). In blood and bone marrow, BDCA-4/NP-1 is exclusively expressed on PDCs, but in tonsils also on a few other cells, primarily follicular B helper memory T cells (TFH). [Copyright &y& Elsevier]
- Published
- 2002
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170. A new efficient method of generating photoaffinity beads for drug target identification.
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Nishiya, Yoichi, Hamada, Tomoko, Abe, Masayuki, Takashima, Michio, Tsutsumi, Kyoko, and Okawa, Katsuya
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SMALL molecules , *ENCAPSULATION (Catalysis) , *THERAPEUTIC immobilization , *DRUG target , *PHOTOLABILE compounds - Abstract
Affinity purification is one of the most prevalent methods for the target identification of small molecules. Preparation of an appropriate chemical for immobilization, however, is a tedious and time-consuming process. A decade ago, a photoreaction method for generating affinity beads was reported, where compounds are mixed with agarose beads carrying a photoreactive group (aryldiazirine) and then irradiated with ultraviolet light under dry conditions to form covalent attachment. Although the method has proven useful for identifying drug targets, the beads suffer from inefficient ligand incorporation and tend to shrink and aggregate, which can cause nonspecific binding and low reproducibility. We therefore decided to craft affinity beads free from these shortcomings without compromising the ease of preparation. We herein report a modified method; first, a compound of interest is mixed with a crosslinker having an activated ester and a photoreactive moiety on each end. This mixture is then dried in a glass tube and irradiated with ultraviolet light. Finally, the conjugates are dissolved and reacted with agarose beads with a primary amine. This protocol enabled us to immobilize compounds more efficiently (approximately 500-fold per bead compared to the original method) and generated beads without physical deterioration. We herein demonstrated that the new FK506-immobilized beads specifically isolated more FKBP12 than the original beads, thereby proving our method to be applicable to target identification experiments. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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171. Multiple functions of FADD in apoptosis, NF-κB-related signaling, and heart development in Xenopus embryos.
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Sakamaki, Kazuhiro, Takagi, Chiyo, Kitayama, Atsushi, Kurata, Tomoko, Yamamoto, Takamasa S., Chiba, Kumiko, Kominami, Katsuya, Jung, Sang-Kee, Okawa, Katsuya, Nozaki, Masami, Kubota, Hiroshi Y., and Ueno, Naoto
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APOPTOSIS , *CELLULAR signal transduction , *ADAPTOR proteins , *HEART development , *XENOPUS , *CELL proliferation , *EMBRYOLOGY , *IN situ hybridization , *POLYMERASE chain reaction - Abstract
FADD is an adaptor protein that transmits apoptotic signals from death receptors. Additionally, FADD has been shown to play a role in various functions including cell proliferation. However, the physiological role of FADD during embryonic development remains to be delineated. Here, we show the novel roles FADD plays in development and the molecular mechanisms of these roles in Xenopus embryos. By whole-mount in situ hybridization and RT- PCR analysis, we observed that fadd is constantly expressed in early embryos. The upregulation or downregulation of FADD proteins by embryonic manipulation resulted in induction of apoptosis or size changes in the heart during development. Expression of a truncated form of FADD, FADDdd, which lacks pro-apoptotic activity, caused growth retardation of embryos associated with dramatic expressional fluctuations of genes that are regulated by NF-κB. Moreover, we isolated a homolog of mammalian cullin-4 ( Cul4), a component of the ubiquitin E3 ligase family, as a FADDdd-interacting molecule in Xenopus embryos. Thus, our study shows that FADD has multiple functions in embryos; it plays a part in the regulation of NF-κB activation and heart formation, in addition to apoptosis. Furthermore, our findings provide new insights into how Cul4-based ligase is related to FADD signaling in embryogenesis. [ABSTRACT FROM AUTHOR]
- Published
- 2012
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172. Autoantibodies specific to hnRNP K: a new diagnostic marker for immune pathophysiology in aplastic anemia.
- Author
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Qi, Zhirong, Takamatsu, Hiroyuki, Espinoza, J. Luis, Lu, Xuzhang, Sugimori, Naomi, Yamazaki, Hirohito, Okawa, Katsuya, and Nakao, Shinji
- Published
- 2010
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173. Polyubiquitin conjugation to NEMO by triparite motif protein 23 (TRIM23) is critical in antiviral defense.
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Arimoto, Kei-ichiro, Funami, Kenji, Saeki, Yasushi, Tanaka, Keiji, Okawa, Katsuya, Takeuchi, Osamu, Akira, Shizuo, Murakami, Yoshiki, and Shimotohnoc, Kunitada
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VIRUS diseases , *CELL receptors , *UBIQUITIN , *T cells , *PHOSPHORYLATION - Abstract
The rapid induction of type I IFN is a central event of the innate defense against viral infections and is tightly regulated by a number of cellular molecules. Viral components induce strong type I IFN responses through the activation of toll-like receptors (TLRs) and intracellular cytoplasmic receptors such as an RNA helicase RIG-I and/ or MDA5. According to recent studies, the NF-κB essential modulator (NEMO, also called IKKγ) is crucial for this virus-induced antiviral response. However, the precise roles of signal activation by NEMO adaptor have not been elucidated. Here, we show that virus-induced IRF3 and NF-κB activation depends on the K(lys)-27-linked polyubiquitination to NEMO by the novel ubiquitin E3 ligase triparite motif protein 23 (TRIM23). Virus-induced IRF3 and NF-κB activation, as well as K27- linked NEMO polyubiquitination, were abrogated in TRIM23 knock- down cells, whereas TRIM23 knockdown had no effect on TNFα-mediated NF-κB activation. Furthermore, in NEMO-deficient mouse embryo fibroblast cells, IFN-stimulated response element-driven reporter activity was restored by ectopic expression of WT NEMO, as expected, but only partial recovery by NEMO K165/309/325/326/344R multipoints mutant on which TRIM23-mediated ubiquitin conjugation was substantially reduced. Thus, we conclude that TRIM23-mediated ubiquitin conjugation to NEMO is essential for TLR3- and RIG-I/MDA5- mediated antiviral innate and inflammatory responses. [ABSTRACT FROM AUTHOR]
- Published
- 2010
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174. LKB1 Suppresses p21-activated Kinase-1 (PAK1) by Phosphorylation of Thr109 in the p21-binding Domain.
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Deguchi, Atsuko, Miyoshi, Hiroyuki, Kojima, Yasushi, Okawa, Katsuya, Aoki, Masahiro, and Taketo, Makoto M.
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TUMOR suppressor genes , *PEUTZ-Jeghers syndrome , *GENETIC mutation , *CELL growth , *CELL motility , *FIBROBLASTS , *CELL migration , *MICE - Abstract
The serine/threonine protein kinase LKB1 is a tumor suppressor gone mutated in Peutz-Jeghers syndrome patients. The mutations are found also in several types of sporadic cancer. Although LKB1 is implicated in suppression of cell growth and metastasis, the detailed mechanisms have not yet been elucidated. In this study, we investigated the effect of LKB1 on cell motility, whose acquisition occurs in early metastasis. The knockdown of LKB1 enhanced cell migration and PAK1 activity in human colon cancer HCT116 cells, whereas forced expression of LKB1 in Lkb1-null mouse embryonic fibroblasts suppressed PAK1 activity and PAK1-mediated cell migration simultaneously. Notably, LKB1 directly phosphorylated PAK1 at Thr109 in the p21-binding domain in vitro. The phosphomimetic T109E mutant showed significantly lower protein kinase activity than wild-type PAK1, suggesting that the phosphorylation at Thr109 by LKB1 was responsible for suppression of PAK1. Consistently, the nonphosphorylatable T109A mutant was resistant to suppression by LKB1. Furthermore, we found that PAK1 was activated in the hepatocellular carcinomas and the precancerous liver lesions of Lkb1(+/-) mice. Taken together, these results suggest that PAK1 is a direct downstream target of LKB1 and plays an essential role in LKB1-induced suppression of cell migration. [ABSTRACT FROM AUTHOR]
- Published
- 2010
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175. The RIG-I-like receptor IFIH1/MDA5 is a dermatomyositis-specific autoantigen identified by the anti-CADM-140 antibody.
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Nakashima, Ran, Imura, Yoshitaka, Kobayashi, Shio, Yukawa, Naoichiro, Yoshifuji, Hajime, Nojima, Takaki, Kawabata, Daisuke, Ohmura, Koichiro, Usui, Takashi, Fujii, Takao, Okawa, Katsuya, and Mimori, Tsuneyo
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DERMATOMYOSITIS , *IMMUNOGLOBULINS , *THERAPEUTIC use of interferons , *DNA helicases , *INTERSTITIAL lung diseases , *THERAPEUTICS - Abstract
Objectives. Various autoantibodies are detected in the sera of PM/DM patients. Some of them are specific to PM/DM patients and closely associated with clinical manifestations of the diseases. Recently, the anti-CADM-140 antibody was reported to be found specifically in clinically amyopathic DM (C-ADM) patients and to be associated with acute interstitial lung disease (ILD). We assessed the clinical significance of the anti-CADM-140 antibody and then investigated the autoantigen recognized by the anti-CADM-140 antibody. [ABSTRACT FROM PUBLISHER]
- Published
- 2010
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176. Stomagen positively regulates stomatal density in Arabidopsis.
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Sugano, Shigeo S., Shimada, Tomoo, Imai, Yu, Okawa, Katsuya, Tamai, Atsushi, Mori, Masashi, and Hara-Nishimura, Ikuko
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PLANT physiology , *LEAF anatomy , *GENETICS , *ARABIDOPSIS , *BRASSICACEAE , *STOMATA , *EPIDERMIS , *EPITHELIUM , *GAS exchange in plants - Abstract
Stomata in the epidermal tissues of leaves are valves through which passes CO2, and as such they influence the global carbon cycle. The two-dimensional pattern and density of stomata in the leaf epidermis are genetically and environmentally regulated to optimize gas exchange. Two putative intercellular signalling factors, EPF1 and EPF2, function as negative regulators of stomatal development in Arabidopsis, possibly by interacting with the receptor-like protein TMM. One or more positive intercellular signalling factors are assumed to be involved in stomatal development, but their identities are unknown. Here we show that a novel secretory peptide, which we designate as stomagen, is a positive intercellular signalling factor that is conserved among vascular plants. Stomagen is a 45-amino--rich peptide that is generated from a 102-amino-acid precursor protein designated as STOMAGEN. Both an in planta analysis and a semi-in-vitro analysis with recombinant and chemically synthesized stomagen peptides showed that stomagen has stomata-inducing activity in a dose-dependent manner. A genetic analysis showed that TMM is epistatic to STOMAGEN (At4g12970), suggesting that stomatal development is finely regulated by competitive binding of positive and negative regulators to the same receptor. Notably, STOMAGEN is expressed in inner tissues (the mesophyll) of immature leaves but not in the epidermal tissues where stomata develop. This study provides evidence of a mesophyll-derived positive regulator of stomatal density. Our findings provide a conceptual advancement in understanding stomatal development: inner photosynthetic tissues optimize their function by regulating stomatal density in the epidermis for efficient uptake of CO2. [ABSTRACT FROM AUTHOR]
- Published
- 2010
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177. The CENP-S complex is essential for the stable assembly of outer kinetochore structure.
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Amano, Miho, Suzuki, Aussie, Hori, Tetsuya, Backer, Chelsea, Okawa, Katsuya, Cheeseman, Iain M., and Fukagawa, Tatsuo
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CENTROMERE , *PROTEINS , *COMPLEMENTATION (Genetics) , *HELA cells , *MITOSIS - Abstract
The constitutive centromere-associated network (CCAN) proteins are central to kinetochore assembly. To define the molecular architecture of this critical kinetochore network, we sought to determine the full complement of CCAN components and to define their relationships. This work identified a centromere protein S (CENP-S)-containing subcomplex that includes the new constitutive kinetochore protein CENP-X. Both CENP-Sand CENP-X-deficient chicken DT40 cells are viable but show abnormal mitotic behavior based on live cell analysis. Human HeLa cells depleted for CENP-X also showed mitotic errors. The kinetochore localization of CENP-S and -X is abolished in CENP-T- or CENP-K-deficient cells, but reciprocal experiments using CENP-S-deficient cells did not reveal defects in the localization of CCAN components. However, CENP-S-and CENP-X-deficient cells show a significant reduction in the size of the kinetochore outer plate. In addition, we found that intrakinetochore distance was increased in CENP-S- and CENP-X-deficient cells. These results suggest that the CENP-S complex is essential for the stable assembly of the outer kinetochore. [ABSTRACT FROM AUTHOR]
- Published
- 2009
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178. RECK Forms Cowbell-shaped Dimers and Inhibits Matrix Metalloproteinase-catalyzed Cleavage of Fibronectin.
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Omura, Akira, Matsuzaki, Tomoko, Mio, Kazuhiro, Ogura, Toshihiko, Yamamoto, Mako, Fujita, Akiko, Okawa, Katsuya, Kitayama, Hitoshi, Takahashi, Chiaki, Sato, Chikara, and Noda, Makoto
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DIMERS , *OLIGOMERS , *METALLOPROTEINASES , *METALLOENZYMES , *PROTEASE inhibitors - Abstract
The membrane-anchored protease regulator RECK plays important roles in mammalian development and tumor suppression. The biochemical bases of these bioactivities, however, remain poorly understood. Here we report on the properties of a recombinant RECK protein expressed in mouse fibroblasts and purified to near homogeneity. Multiple lines of evidence indicate that RECK forms dimers. Single particle reconstruction using transmission electron microscopy revealed a unique cow- bell-like shaped RECK dimer. RECK is cleaved by MMP-2 and MMP-7 and competitively inhibits MMP-7-catalyzed cleavage of fibronectin. Forced RECK expression in HT1080 cells, whose endogenous RECK expression is minimal, leads to an increase in the amount of fibronectin associated with the cell. Our data demonstrate the ability of RECK to protect fibronectin from MMP-mediated degradation. [ABSTRACT FROM AUTHOR]
- Published
- 2009
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179. In vitro analyses of the production and activity of secondary small interfering RNAs in C. elegans.
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Aoki, Kazuma, Moriguchi, Hiromi, Yoshioka, Tomoko, Okawa, Katsuya, and Tabara, Hiroaki
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SMALL interfering RNA , *RIBONUCLEASES , *DOUBLE-stranded RNA , *RNA polymerases , *CAENORHABDITIS elegans , *MESSENGER RNA - Abstract
In the RNA interference (RNAi) pathway, small interfering RNAs (siRNAs) play important roles as intermediates. Primary siRNAs are produced from trigger dsRNAs by an RNaseIII-related enzyme called Dicer; in some organisms, secondary siRNAs are also produced by processes involving RNA-dependent RNA polymerases (RdRPs), which act on target mRNAs. Using a cell-free assay system prepared from Caenorhabditis elegans, we analyzed the production and activity of secondary siRNAs. In this cell-free system, RdRP activity acts on mRNA-derived templates to produce small RNAs. The RRF-1 complex is predominantly responsible for the RdRP activity, and synthesizes secondary-type siRNA molecules in a Dicer-independent manner. Notably, secondary-type siRNAs induce a prominent Slicer activity to cleave target mRNAs far more effectively than primary-type siRNAs. An Argonaute protein, CSR-1, is responsible for the Slicer activity induced by secondary-type siRNAs. Secondary rather than primary siRNAs may play a major role in the destabilization of target transcripts during RNAi in C. elegans. [ABSTRACT FROM AUTHOR]
- Published
- 2007
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180. Enhancement of α-secretase cleavage of amyloid precursor protein by a metalloendopeptidase nardilysin.
- Author
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Hiraoka, Yoshinori, Ohno, Mikiko, Yoshida, Kazuhiro, Okawa, Katsuya, Tomimoto, Hidekazu, Kita, Toru, and Nishi, Eiichiro
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AMYLOID beta-protein , *PROTEINS , *PEPTIDES , *PROTEOLYTIC enzymes , *CELLS , *RNA - Abstract
Amyloid-β (Aβ) peptide, the principal component of senile plaques in the brains of patients with Alzheimer’s disease, is derived from proteolytic cleavage of amyloid precursor protein (APP) by β- and γ-secretases. Alternative cleavage of APP by α-secretase occurs within the Aβ domain and precludes generation of Aβ peptide. Three members of the ADAM ( isintegrin nd etalloprotease) family of proteases, ADAM9, 10 and 17, are the main candidates for α-secretases. However, the mechanism that regulates α-secretase activity remains unclear. We have recently demonstrated that nardilysin (EC 3.4.24.61, N-arginine dibasic convertase; NRDc) enhances ectodomain shedding of heparin-binding epidermal growth factor-like growth factor through activation of ADAM17. In this study, we show that NRDc enhances the α-secretase activity of ADAMs, which results in a decrease in the amount of Aβ generated. When expressed with ADAMs in cells, NRDc dramatically increased the secretion of α-secretase-cleaved soluble APP and reduced the amount of Aβ peptide generated. A peptide cleavage assay in vitro also showed that recombinant NRDc enhances ADAM17-induced cleavage of the peptide substrate corresponding to the α-secretase cleavage site of APP. A reduction of endogenous NRDc by RNA interference was accompanied by a decrease in the cleavage by α-secretase of APP and increase in the amount of Aβ generated. Notably, NRDc is clearly expressed in cortical neurons in human brain. Our results indicate that NRDc is involved in the metabolism of APP through regulation of the α-secretase activity of ADAMs, which may be a novel target for the treatment of Alzheimer’s disease. [ABSTRACT FROM AUTHOR]
- Published
- 2007
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181. Gab family proteins are essential for postnatal maintenance of cardiac function via neuregulin-1/ErbB signaling.
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Nakaoka, Yoshikazu, Nishida, Keigo, Narimatsu, Masahiro, Kamiya, Atsunori, Minami, Takashi, Sawa, Hirofumi, Okawa, Katsuya, Fujio, Yasushi, Koyama, Tatsuya, Maeda, Makiko, Sone, Manami, Yamasaki, Satoru, Arai, Yuji, Gou Young Koh, Kodama, Tatsuhiko, Hirota, Hisao, Otsu, Kinya, Hirano, Toshio, and Mochizuki, Naoki
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GROWTH factors , *CYTOKINES , *TYROSINE , *ONCOGENES , *CANCER genes , *HEART diseases , *ENDOCARDIUM - Abstract
Grb2-associated binder (Gab) family of scaffolding adaptor proteins coordinate signaling cascades downstream of growth factor and cytokine receptors. In the heart, among EGF family members, neuregulin-1β (NRG-1β, a paracrine factor produced from endothelium) induced remarkable tyrosine phosphorylation of Gab1 and Gab2 via erythroblastic leukemia viral oncogene (ErbB) receptors. We examined the role of Gab family proteins in NRG-1β/ErbB-mediated signal in the heart by creating cardiomyocyte-specific Gab1/Gab2 double knockout mice (DKO mice). Although DKO mice were viable, they exhibited marked ventricular dilatation and reduced contractility with aging. DKO mice showed high mortality after birth because of heart failure. In addition, we noticed remarkable endocardial fibroelastosis and increase of abnormally dilated vessels in the ventricles of DKO mice. NRG-1β induced activation of both ERK and AKT in the hearts of control mice but not in those of DKO mice. Using DNA microarray analysis, we found that stimulation with NRG-1β upregulated expression of an endothelium-stabilizing factor, angiopoietin 1, in the hearts of control mice but not in those of DKO mice, which accounted for the pathological abnormalities in the DKO hearts. Taken together, our observations indicated that in the NRG-1β/ErbB signaling, Gab1 and Gab2 of the myocardium are essential for both maintenance of myocardial function and stabilization of cardiac capillary and endocardial endothelium in the postnatal heart. [ABSTRACT FROM AUTHOR]
- Published
- 2007
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182. Fibulin-5/DANCE has an elastogenic organizer activity that is abrogated by proteolytic cleavage in vivo.
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Hirai, Maretoshi, Ohbayashi, Tetsuya, Horiguchi, Masahito, Okawa, Katsuya, Hagiwara, Akari, Chien, Kenneth R., Kita, Toru, and Nakamura, Tomoyuki
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PROTEOLYTIC enzymes , *EPIDERMAL growth factor , *PHENOTYPES , *MICROFIBRILS , *REGENERATION (Biology) - Abstract
Elastic fibers are required for the elasticity and integrity of various organs. We and others previously showed that fibulin-5 (also called developing arteries and neural crest EGF-like [DANCE] or embryonic vascular EGF-like repeat--containing protein [EVEC]) is indispensable for elastogenesis by studying fibulin-5--deficient mice, which recapitulate human aging phenotypes caused by disorganized elastic fibers (Nakamura, T., P.R. Lozano, Y. Ikeda, Y. Iwanaga, A. Hinek, S. Minamisawa, C.F. Cheng, K. Kobuke, N. Dalton, Y. Takada, et al. 2002. Nature. 415:171-175; Yanagisawa, H., E.C. Davis, B.C. Starcher, T. Ouchi, M. Yanagisawa, J.A. Richardson, and E.N. Olson. 2002. Nature. 415:168-171). However, the molecular mechanism by which fiblin-5 contributes to elastogenesis remains unknown. We report that fibulin-5 protein potently induces elastic fiber assembly and maturation by organizing tropoelastin and cross-linking enzymes onto microfibrils. Deposition of fibulin-5 on microfibrils promotes coacervation and alignment of tropoelastins on microfibrils, and also facilitates cross-linking of tropoelastin by tethering lysyl oxidase-like 1, 2, and 4 enzymes. Notably, recombinant fibulin-5 protein induced elastogenesis even in serum-free conditions, although elastogenesis in cell culture has been believed to be serum-dependent. Moreover, the amount of full-length fibulin-5 diminishes with age, while truncated fibulin-5, which cannot promote elastogenesis, increases. These data suggest that fibulin-5 could be a novel therapeutic target for elastic fiber regeneration. [ABSTRACT FROM AUTHOR]
- Published
- 2007
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183. Klotho converts canonical FGF receptor into a specific receptor for FGF23.
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Urakawa, Itaru, Yamazaki, Yuji, Shimada, Takashi, Iijima, Kousuke, Hasegawa, Hisashi, Okawa, Katsuya, Fujita, Toshiro, Fukumoto, Seiji, and Yamashita, Takeyoshi
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GROWTH factors , *FIBROBLASTS , *CELL lines , *CELL membranes , *CELL culture , *CYTOKINES - Abstract
FGF23 is a unique member of the fibroblast growth factor (FGF) family because it acts as a hormone that derives from bone and regulates kidney functions, whereas most other family members are thought to regulate various cell functions at a local level. The renotropic activity of circulating FGF23 indicates the possible presence of an FGF23-specific receptor in the kidney. Here we show that a previously undescribed receptor conversion by Klotho, a senescence-related molecule, generates the FGF23 receptor. Using a renal homogenate, we found that Klotho binds to FGF23. Forced expression of Klotho enabled the high-affinity binding of FGF23 to the cell surface and restored the ability of a renal cell line to respond to FGF23 treatment. Moreover, FGF23 incompetence was induced by injecting wild-type mice with an anti-Klotho monoclonal antibody. Thus, Klotho is essential for endogenous FGF23 function. Because Klotho alone seemed to be incapable of intracellular signalling, we searched for other components of the FGF23 receptor and found FGFR1(IIIc), which was directly converted by Klotho into the FGF23 receptor. Thus, the concerted action of Klotho and FGFR1(IIIc) reconstitutes the FGF23 receptor. These findings provide insights into the diversity and specificity of interactions between FGF and FGF receptors. [ABSTRACT FROM AUTHOR]
- Published
- 2006
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184. A novel histone exchange factor, protein phosphatase 2Cγ mediates the exchange and dephosphorylation of H2A-H2B.
- Author
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Kimura, Hiroshi, Takizawa, Nanako, Allemand, Eric, Hori, Tetsuya, Iborra, Francisco J., Nozaki, Naohito, Muraki, Michiko, Hagiwara, Masatoshi, Krainer, Adrian R., Fukagawa, Tatsuo, and Okawa, Katsuya
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HISTONES , *PROTEINS , *BASIC proteins , *CHROMATIN , *NUCLEOPROTEINS - Abstract
In eukaryotic nuclei, DNA is wrapped around a protein octamer composed of the core histones H2A, H2B, H3, and H4, forming nucleosomes as the fundamental units of chromatin. The modification and deposition of specific histone variants play key roles in chromatin function. In this study, we established an in vitro system based on permeabilized cells that allows the assembly and exchange of histones in situ. H2A and H2B, each tagged with green fluorescent protein (GFP), are incorporated into euchromatin by exchange independently of DNA replication, and H3.1-GFP is assembled into replicated chromatin, as found in living cells. By purifying the cellular factors that assist in the incorporation of H2A--H2B, we identified protein phosphatase (PP) 2C γ subtype (PP2Cγ/PPM1G) as a histone chaperone that binds to and dephosphorylates H2A--H2B. The disruption of PP2Cγ in chicken DT40 cells increased the sensitivity to caffeine, a reagent that disturbs DNA replication and damage checkpoints, suggesting the involvement of PP2Cγ-mediated histone dephosphorylation and exchange in damage response or checkpoint recovery in higher eukaryotes. [ABSTRACT FROM AUTHOR]
- Published
- 2006
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185. α-Tocopherol induces calnexin in renal tubular cells: Another protective mechanism against free radical-induced cellular damage
- Author
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Lee, Wen-Hua, Akatsuka, Shinya, Shirase, Tomoyuki, Kumar Dutta, Khokon, Jiang, Li, Liu, Yu-Ting, Onuki, Janice, Yamada, Yoshihiro, Okawa, Katsuya, Wada, Youichiro, Watanabe, Akira, Kohro, Takahide, Noguchi, Noriko, and Toyokuni, Shinya
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VITAMIN E , *ISOPENTENOIDS , *MESSENGER RNA , *CANCER prevention - Abstract
Abstract: Pre-administration of α-tocopherol is protective against oxidative renal tubular damage and subsequent carcinogenesis by ferric nitrilotriacetate (Fe-NTA) in rats. We searched for mechanisms other than the scavenging effect of α-tocopherol with microarray analyses, which implicated calnexin, a chaperone for glycoproteins. Renal mRNA levels of calnexin significantly increased 3h after an injection of Fe-NTA in rats fed a standard diet whereas those fed an α-tocopherol-supplemented diet showed an increase prior to injection, but after injection showed a decrease in renal calnexin mRNA levels, with unaltered protein levels. In experiments using LLC-PK1 cells, addition of α-tocopherol was protective against oxidative stress by H2O2, concomitant with calnexin induction. Knockdown of calnexin by siRNA significantly reduced this protection. Furthermore, COS-7 cells transfected with the calnexin gene were more resistant to H2O2. Together with the fact that α-tocopherol induced N-acetylglucosaminyltransferase 3, our data suggest that α-tocopherol modifies glycoprotein metabolism partially by conferring mild ER stress. This adds another molecular mechanism of α-tocopherol toward cancer prevention. [Copyright &y& Elsevier]
- Published
- 2006
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186. Epsin binds to the EH domain of POB1 and regulates receptor-mediated endocytosis.
- Author
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Morinaka, Kenji, Koyama, Shinya, Nakashima, Shintaro, Hinoi, Takao, Okawa, Katsuya, Iwamatsu, Akihiro, and Kikuchi, Akira
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CARRIER proteins , *ENDOCYTOSIS , *EPIDERMAL growth factor , *TRANSFERRIN - Abstract
POB1 has been identified as a RalBP1-binding protein and has the Eps15 homology (EH) domain. The EH domain-containing proteins have been suggested to be involved in clathrin-dependent endocytosis. To clarify the function of POB1, we purified a protein which binds to the EH domain of POB1 from bovine brain cytosol and identified it as Epsin, which is known to bind to the EH domain of Eps15. Epsin has three Asn-Pro-Phe (NPF) motifs in the C-terminal region, which are known to form the core sequence for the binding to the EH domain. The EH domain of POB1 interacted directly with the region containing the NPF motifs of Epsin. Expression of Epsin in CHO-IR cells inhibited internalization of insulin although it affected neither insulin-binding nor autophosphorylation activities of the insulin receptor. Taken together with the observations that Epsin is involved in internalization of the receptors for epidermal growth factor and transferrin, these results suggest that Epsin is a binding partner of POB1 and their binding regulates receptor-mediated endocytosis. [ABSTRACT FROM AUTHOR]
- Published
- 1999
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187. Small G protein Ral and its downstream molecules regulate endocytosis of EGF and insulin receptors.
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Nakashima, Shintaro, Morinaka, Kenji, Koyama, Shinya, Ikeda, Masahiro, Kishida, Michiko, Okawa, Katsuya, Iwamatsu, Akihiro, Kishida, Shosei, and Kikuchi, Akira
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PEPTIDES , *ENDOCYTOSIS , *TRANSFERRIN , *G proteins , *INSULIN receptors , *EPIDERMAL growth factor - Abstract
The involvement of Ral and its downstream molecules in receptor-mediated endocytosis was examined. Expression of either RalG23V or RalS28N, which are known to be constitutively active and dominant-negative forms, respectively, in A431 cells blocked internalization of epidermal growth factor (EGF). Stable expression of RalG23V or RalS28N in CHO-IR cells also inhibited internalization of insulin. Internalization of EGF and insulin was not affected by full-length RalBP1 which is an effector protein of Ral, but was inhibited by its C-terminal region which binds directly to Ral and POB1. POB1 is a binding protein of RalBP1 and has the Eps15 homology (EH) domain. Deletion mutants of POB1 inhibited internalization of EGF and insulin. However, internalization of transferrin was unaffected by Ral, RalBP1, POB1 and their mutants. Epsin and Eps15 have been reported to be involved in the regulation of endocytosis of the receptors for EGF and transferrin. The EH domain of POB1 bound directly to Epsin and Eps15. Taken together with the observation that EGF and insulin activate Ral, these results suggest that Ral, RalBP1 and POB1 transmit the signal from the receptors to Epsin and Eps15, thereby regulating ligand-dependent receptor-mediated endocytosis. [ABSTRACT FROM AUTHOR]
- Published
- 1999
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188. A caspase-activated DNase that degrades DNA during apoptosis, and its inhibitor ICAD.
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Enari, Masato, Sakahira, Hideki, Yokoyama, Hideki, Okawa, Katsuya, Iwamatsu, Akihiro, and Nagata, Shigekazu
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APOPTOSIS , *DEOXYRIBONUCLEASES , *CYTOPLASM , *GENETICS - Abstract
Presents research which identified a caspase-activated deoxyribonuclease (CAD) and its inhibitor (ICAD) in the cytoplasmic fraction of mouse lymphoma cells. Regulation of homeostasis of animals through apoptosis; Genetic mediation of apoptosis through caspase family of proteases; Degradation of chromosomal DNA; Interactions between CAD and ICAD in apoptosis.
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- 1998
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189. Katanin, a microtubule-severing protein, is a novel AAA ATPase that targets to the centrosome...
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Hartman, James J., Mahr, Jeff, McNally, Karen, Okawa, Katsuya, Iwamatsu, Akihiro, Thomas, Susan, Cheesman, Sarah, Heuser, John, Vale, Ronald D., and McNally, Francis J.
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ADENOSINE triphosphatase , *CENTROSOMES , *MICROTUBULES - Abstract
Focuses on katanin, which is a ATPase that targets centrosomes, with the use of a WD40-containing subunit, and a microtubule-severing protein. Information on the baculovirus expression and molecular structure of the katanin subunits; Reference to p60 katanin having microtubule-stimulated ATPase and severing activity; Indepth look at the mechanism of katanin-mediated microtubule severing; Relation to the targeting of katanin to centrosomes.
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- 1998
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190. RNA-modifying enzyme Alkbh8 is involved in mouse embryonic development.
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Nakai M, Hase H, Zhao Y, Okawa K, Honda K, Ikuma K, Kitae K, and Tsujikawa K
- Abstract
RNAs undergo more than 300 modifications after transcription. Aberrations in RNA modifications can lead to diseases; their involvement in fetal development has been suggested. This study explored the RNA modifications related to fetal development in mice. We quantified changes in RNA modifications present in mouse embryos at each stage: Metaphase II (MII) oocyte; pronucleus; 2-cell; morula; blastocyst; embryonic days (E)10.5, 13.5, 16.5, and 19.5; and newborn (post-natal day [P]0) using ultra-performance liquid chromatography-tandem mass spectrometry (UPLC-MS/MS). Our results confirm that many RNAs undergo dynamic modifications. In particular, 5-methoxycarbonylmethyluridine (mcm5U) modification was distinctive and increased during the fetal period. In Alkbh8 -knockout (KO) mice, the tRNA protein translation efficiency was reduced. Proteome analysis revealed that the factors downregulated in Alkbh8 -KO mice were associated with red blood cell and protoporphyrin metabolism. Our results suggest that ALKBH8 facilitates changes in tRNA balance in conjunction with mcm5U, which are essential for normal red blood cell differentiation and embryogenesis in mice., Competing Interests: The authors declare no competing interests., (© 2024 The Author(s).)
- Published
- 2024
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191. ALKBH8 contributes to neurological function through oxidative stress regulation.
- Author
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Honda K, Hase H, Tanikawa S, Okawa K, Chen L, Yamaguchi T, Nakai M, Kitae K, Ago Y, Nakagawa S, and Tsujikawa K
- Abstract
Transfer RNA (tRNA) modification is essential for proper protein translation, as these modifications play important roles in several biological functions and disease pathophysiologies. AlkB homolog 8 (ALKBH8) is one of the nine mammalian ALKBH family molecules known to regulate selenoprotein translation through the modification of the wobble uridine (U34) in tRNA; however, its specific biological roles remain unclear. In this study, we investigated the role of ALKBH8 using Alkbh8 -knockout ( Albkh8
-/- ) mice, which were observed to have reduced 5-methoxycarbonylmethyluridine (mcm5U) and (S)-5-methoxycarbonylhydroxymethyluridine levels; notably, the mcm5U level was partially compensated only in the brain. The results of the novel object recognition test showed reduction in time to explore a novel object in Albkh8-/- mice; increased latency to fall in the rotarod performance test and latency to the immobility period in the forced swim test were also observed. These abnormal behaviors indicate dysfunction of the central nervous system. Furthermore, we observed reduced brain weight and ischemic pathological changes in the cerebral cortex and hippocampus in the form of weak eosin staining in the fiber tracts adjacent to the hippocampal cornu ammonis 1 region and an increase in pyramidal cells in the temporal lobe. Concordantly, we identified the differential expression of oxidative stress-related proteins and metabolites in the cerebral cortex and hippocampus using omics analyses. Finally, neurons and glial cells derived from Albkh8-/- mice show reduced mitochondrial membrane potential. Collectively, these findings indicate that ALKBH8 maintains neural function through an oxidative stress-regulatory mechanism., (© The Author(s) 2024. Published by Oxford University Press on behalf of National Academy of Sciences.)- Published
- 2024
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- View/download PDF
192. Nicotinamide phosphoribosyltransferase is a molecular target of potent anticancer agents identified from phenotype-based drug screening.
- Author
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Yamaguchi D, Imaizumi T, Yagi K, Matsumoto Y, Nakashima T, Hirose A, Kashima N, Nosaka Y, Hamada T, Okawa K, Nishiya Y, and Kubo K
- Subjects
- Aldehyde-Lyases drug effects, Aldehyde-Lyases metabolism, Animals, Antineoplastic Agents pharmacology, Cell Line, Tumor, Cytokines drug effects, Cytokines metabolism, Drug Discovery methods, Drug Evaluation, Preclinical, Enzyme Inhibitors pharmacology, Humans, Male, Mice, Mice, Inbred BALB C, Mice, Nude, Models, Molecular, Neoplasms drug therapy, Phenotype, Structure-Activity Relationship, Drug Screening Assays, Antitumor methods, Nicotinamide Phosphoribosyltransferase drug effects, Nicotinamide Phosphoribosyltransferase metabolism
- Abstract
Phenotypic screening in drug discovery has been revived with the expectation of providing promising lead compounds and drug targets and improving the success rate of drug approval. However, target identification remains a major bottleneck in phenotype-based drug discovery. We identified the lead compounds K542 and K405 with a selective inhibition of cell viability against sphingosine-1-phosphate lyase 1 (SGPL1)-transduced ES-2 cells by phenotypic screening. We therefore performed an in vivo pharmacological examination and observed the antitumor activity of K542 in an HT-1080 tumor-bearing mouse xenograft model. SGPL1 was expected to be a therapeutic target in some cancers, suggesting that these lead molecules might be promising candidates; however, their mechanisms of action still remain unexplained. We therefore synthesized the affinity probe Ind-tag derived from K542 and identified the proteins binding to Ind-tag via a pull-down experiment. Proteomics and biochemical analyses revealed that the target molecule of these lead compounds was Nicotinamide phosphoribosyltransferase (NAMPT). We established K542-resistant DLD-1 and HT-1080 cells, and genetic analyses of these cells identified a missense mutation in the NAMPT-encoding gene. This enzymatic experiment clearly showed that K393 exerts enzymatic inhibition against NAMPT. These proteomics, genetics and biochemical analyses clarified that compounds K542 and K405 were NAMPT inhibitors.
- Published
- 2019
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193. Characterization of Aes nuclear foci in colorectal cancer cells.
- Author
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Itatani Y, Sonoshita M, Kakizaki F, Okawa K, Stifani S, Itoh H, Sakai Y, and Taketo MM
- Subjects
- Adenosine Triphosphatases antagonists & inhibitors, Animals, Cell Nucleus ultrastructure, Co-Repressor Proteins, Cytokinesis, HCT116 Cells, HEK293 Cells, HSC70 Heat-Shock Proteins antagonists & inhibitors, Humans, Mice, Mice, Inbred C57BL, Microscopy, Fluorescence, Microscopy, Immunoelectron, Mitosis, Purine Nucleosides pharmacology, Receptors, Notch metabolism, Repressor Proteins genetics, Signal Transduction, Time-Lapse Imaging, Adenosine Triphosphatases metabolism, Cell Nucleus metabolism, Colorectal Neoplasms metabolism, HSC70 Heat-Shock Proteins metabolism, Repressor Proteins metabolism
- Abstract
Amino-terminal enhancer of split (Aes) is a member of Groucho/Transducin-like enhancer (TLE) family. Aes is a recently found metastasis suppressor of colorectal cancer (CRC) that inhibits Notch signalling, and forms nuclear foci together with TLE1. Although some Notch-associated proteins are known to form subnuclear bodies, little is known regarding the dynamics or functions of these structures. Here, we show that Aes nuclear foci in CRC observed under an electron microscope are in a rather amorphous structure, lacking surrounding membrane. Investigation of their behaviour during the cell cycle by time-lapse cinematography showed that Aes nuclear foci dissolve during mitosis and reassemble after completion of cytokinesis. We have also found that heat shock cognate 70 (HSC70) is an essential component of Aes foci. Pharmacological inhibition of the HSC70 ATPase activity with VER155008 reduces Aes focus formation. These results provide insight into the understanding of Aes-mediated inhibition of Notch signalling., (© The Authors 2015. Published by Oxford University Press on behalf of the Japanese Biochemical Society. All rights reserved.)
- Published
- 2016
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194. Protein tyrosine phosphatase SAP-1 protects against colitis through regulation of CEACAM20 in the intestinal epithelium.
- Author
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Murata Y, Kotani T, Supriatna Y, Kitamura Y, Imada S, Kawahara K, Nishio M, Daniwijaya EW, Sadakata H, Kusakari S, Mori M, Kanazawa Y, Saito Y, Okawa K, Takeda-Morishita M, Okazawa H, Ohnishi H, Azuma T, Suzuki A, and Matozaki T
- Subjects
- Animals, Cell Count, Chemokines genetics, Chemokines metabolism, Colitis pathology, Colon pathology, Female, Goblet Cells metabolism, Goblet Cells pathology, HEK293 Cells, Humans, Interleukin-10 deficiency, Interleukin-10 metabolism, Intracellular Signaling Peptides and Proteins metabolism, Male, Mice, NF-kappa B metabolism, Phosphorylation, Phosphotyrosine metabolism, Protein Binding, Protein Transport, Protein-Tyrosine Kinases metabolism, RNA, Messenger genetics, RNA, Messenger metabolism, Receptor-Like Protein Tyrosine Phosphatases, Class 3 deficiency, Syk Kinase, src Homology Domains, src-Family Kinases metabolism, Cell Adhesion Molecules metabolism, Colitis enzymology, Colitis prevention & control, Intestinal Mucosa metabolism, Intestinal Mucosa pathology, Receptor-Like Protein Tyrosine Phosphatases, Class 3 metabolism
- Abstract
Intestinal epithelial cells contribute to regulation of intestinal immunity in mammals, but the detailed molecular mechanisms of such regulation have remained largely unknown. Stomach-cancer-associated protein tyrosine phosphatase 1 (SAP-1, also known as PTPRH) is a receptor-type protein tyrosine phosphatase that is localized specifically at microvilli of the brush border in gastrointestinal epithelial cells. Here we show that SAP-1 ablation in interleukin (IL)-10-deficient mice, a model of inflammatory bowel disease, resulted in a marked increase in the severity of colitis in association with up-regulation of mRNAs for various cytokines and chemokines in the colon. Tyrosine phosphorylation of carcinoembryonic antigen-related cell adhesion molecule (CEACAM) 20, an intestinal microvillus-specific transmembrane protein of the Ig superfamily, was greatly increased in the intestinal epithelium of the SAP-1-deficient animals, suggesting that this protein is a substrate for SAP-1. Tyrosine phosphorylation of CEACAM20 by the protein tyrosine kinase c-Src and the consequent association of CEACAM20 with spleen tyrosine kinase (Syk) promoted the production of IL-8 in cultured cells through the activation of nuclear factor-κB (NF-κB). In addition, SAP-1 and CEACAM20 were found to form a complex through interaction of their ectodomains. SAP-1 and CEACAM20 thus constitute a regulatory system through which the intestinal epithelium contributes to intestinal immunity.
- Published
- 2015
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195. Structure-specific endonucleases xpf and mus81 play overlapping but essential roles in DNA repair by homologous recombination.
- Author
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Kikuchi K, Narita T, Pham VT, Iijima J, Hirota K, Keka IS, Mohiuddin, Okawa K, Hori T, Fukagawa T, Essers J, Kanaar R, Whitby MC, Sugasawa K, Taniguchi Y, Kitagawa K, and Takeda S
- Subjects
- Animals, Cell Death genetics, Cell Line, Tumor, Chickens, Chromosome Aberrations, DNA Breaks, Double-Stranded, HeLa Cells, Humans, Mice, DNA Repair, DNA-Binding Proteins genetics, DNA-Binding Proteins metabolism, Endonucleases genetics, Endonucleases metabolism, Homologous Recombination
- Abstract
DNA double-strand breaks (DSB) occur frequently during replication in sister chromatids and are dramatically increased when cells are exposed to chemotherapeutic agents including camptothecin. Such DSBs are efficiently repaired specifically by homologous recombination (HR) with the intact sister chromatid. HR, therefore, plays pivotal roles in cellular proliferation and cellular tolerance to camptothecin. Mammalian cells carry several structure-specific endonucleases, such as Xpf-Ercc1 and Mus81-Eme1, in which Xpf and Mus81 are the essential subunits for enzymatic activity. Here, we show the functional overlap between Xpf and Mus81 by conditionally inactivating Xpf in the chicken DT40 cell line, which has no Mus81 ortholog. Although mammalian cells deficient in either Xpf or Mus81 are viable, Xpf inactivation in DT40 cells was lethal, resulting in a marked increase in the number of spontaneous chromosome breaks. Similarly, inactivation of both Xpf and Mus81 in human HeLa cells and murine embryonic stem cells caused numerous spontaneous chromosome breaks. Furthermore, the phenotype of Xpf-deficient DT40 cells was reversed by ectopic expression of human Mus81-Eme1 or human Xpf-Ercc1 heterodimers. These observations indicate the functional overlap of Xpf-Ercc1 and Mus81-Eme1 in the maintenance of genomic DNA. Both Mus81-Eme1 and Xpf-Ercc1 contribute to the completion of HR, as evidenced by the data that the expression of Mus81-Eme1 or Xpf-Ercc1 diminished the number of camptothecin-induced chromosome breaks in Xpf-deficient DT40 cells, and to preventing early steps in HR by deleting XRCC3 suppressed the nonviability of Xpf-deficient DT40 cells. In summary, Xpf and Mus81 have a substantially overlapping function in completion of HR., (©2013 AACR.)
- Published
- 2013
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196. Asbestos surface provides a niche for oxidative modification.
- Author
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Nagai H, Ishihara T, Lee WH, Ohara H, Okazaki Y, Okawa K, and Toyokuni S
- Subjects
- 8-Hydroxy-2'-Deoxyguanosine, Aldehydes metabolism, Animals, Asbestos, Amosite metabolism, Asbestos, Amosite toxicity, Asbestos, Crocidolite toxicity, Asbestos, Serpentine metabolism, Chromatin metabolism, Cytoskeleton metabolism, DNA chemistry, DNA metabolism, Deoxyguanosine analogs & derivatives, Deoxyguanosine biosynthesis, Hemoglobins metabolism, Histones metabolism, Iron metabolism, Lung Neoplasms etiology, Lung Neoplasms pathology, Mesothelioma etiology, Mesothelioma pathology, Mice, Oxidation-Reduction, Proteins chemistry, RNA-Binding Proteins metabolism, Rats, Ribosomal Proteins metabolism, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization, Surface Properties, Asbestos, Amosite chemistry, Asbestos, Crocidolite chemistry, Asbestos, Serpentine chemistry, DNA Damage, Proteins metabolism
- Abstract
Asbestos is a potent carcinogen associated with increased risks of malignant mesothelioma and lung cancer in humans. Although the mechanism of carcinogenesis remains elusive, the physicochemical characteristics of asbestos play a role in the progression of asbestos-induced diseases. Among these characteristics, a high capacity to adsorb and accommodate biomolecules on its abundant surface area has been linked to cellular and genetic toxicity. Several previous studies identified asbestos-interacting proteins. Here, with the use of matrix-assisted laser desorption ionization-time of flight mass spectrometry, we systematically identified proteins from various lysates that adsorbed to the surface of commercially used asbestos and classified them into the following groups: chromatin/nucleotide/RNA-binding proteins, ribosomal proteins, cytoprotective proteins, cytoskeleton-associated proteins, histones and hemoglobin. The surfaces of crocidolite and amosite, two iron-rich types of asbestos, caused more protein scissions and oxidative modifications than that of chrysotile by in situ-generated 4-hydroxy-2-nonenal. In contrast, we confirmed the intense hemolytic activity of chrysotile and found that hemoglobin attached to chrysotile, but not silica, can work as a catalyst to induce oxidative DNA damage. This process generates 8-hydroxy-2'-deoxyguanosine and thus corroborates the involvement of iron in the carcinogenicity of chrysotile. This evidence demonstrates that all three types of asbestos adsorb DNA and specific proteins, providing a niche for oxidative modification via catalytic iron. Therefore, considering the affinity of asbestos for histones/DNA and the internalization of asbestos into mesothelial cells, our results suggest a novel hypothetical mechanism causing genetic alterations during asbestos-induced carcinogenesis., (© 2011 Japanese Cancer Association.)
- Published
- 2011
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197. Histone chaperone Spt6 is required for class switch recombination but not somatic hypermutation.
- Author
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Okazaki IM, Okawa K, Kobayashi M, Yoshikawa K, Kawamoto S, Nagaoka H, Shinkura R, Kitawaki Y, Taniguchi H, Natsume T, Iemura S, and Honjo T
- Subjects
- Animals, B-Lymphocytes immunology, B-Lymphocytes metabolism, Base Sequence, Cell Line, Cytidine Deaminase chemistry, Cytidine Deaminase genetics, Cytidine Deaminase metabolism, DNA Primers genetics, Gene Knockdown Techniques, Histones metabolism, Humans, Mice, Molecular Chaperones antagonists & inhibitors, Molecular Chaperones genetics, Molecular Chaperones metabolism, Mutant Proteins chemistry, Mutant Proteins genetics, Mutant Proteins metabolism, Protein Interaction Domains and Motifs, Recombinant Proteins chemistry, Recombinant Proteins genetics, Recombinant Proteins metabolism, Sequence Deletion, Transcription Factors antagonists & inhibitors, Transcription Factors genetics, Two-Hybrid System Techniques, Immunoglobulin Class Switching, Somatic Hypermutation, Immunoglobulin, Transcription Factors metabolism
- Abstract
Activation-induced cytidine deaminase (AID) is shown to be essential and sufficient to induce two genetic alterations in the Ig loci: class switch recombination (CSR) and somatic hypermutation (SHM). However, it is still unknown how a single-molecule AID differentially regulates CSR and SHM. Here we identified Spt6 as an AID-interacting protein by yeast two-hybrid screening and immunoprecipitation followed by mass spectrometry. Knockdown of Spt6 resulted in severe reduction of CSR in both the endogenous Ig locus in B cells and an artificial substrate in fibroblast cells. Conversely, knockdown of Spt6 did not reduce but slightly enhanced SHM in an artificial substrate in B cells, indicating that Spt6 is required for AID to induce CSR but not SHM. These results suggest that Spt6 is involved in differential regulation of CSR and SHM by AID.
- Published
- 2011
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- View/download PDF
198. Huwe1, a novel cellular interactor of Gag-Pol through integrase binding, negatively influences HIV-1 infectivity.
- Author
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Yamamoto SP, Okawa K, Nakano T, Sano K, Ogawa K, Masuda T, Morikawa Y, Koyanagi Y, and Suzuki Y
- Subjects
- Animals, Cell Line, Gene Knockdown Techniques, HEK293 Cells, HIV-1 genetics, HIV-1 ultrastructure, HeLa Cells, Humans, Mice, Moloney murine leukemia virus genetics, Moloney murine leukemia virus metabolism, NIH 3T3 Cells, Protein Binding, Protein Interaction Domains and Motifs, Tumor Suppressor Proteins, Ubiquitin-Protein Ligases genetics, Fusion Proteins, gag-pol metabolism, HIV Infections metabolism, HIV-1 metabolism, HIV-1 pathogenicity, Integrases metabolism, Ubiquitin-Protein Ligases metabolism
- Abstract
Integration, an indispensable step for retrovirus replication, is executed by integrase (IN), which is expressed as a part of a Gag-Pol precursor. Although mechanistic detail of the IN-catalyzed integration reaction is well defined, numerous evidence have demonstrated that IN is involved in multiple steps of retrovirus replication other than integration. In this study, Huwe1, a HECT-type E3 ubiquitin ligase, was identified as a new cellular interactor of human immunodeficiency virus type 1 (HIV-1) IN. The interaction was mediated through the catalytic core domain of IN and a wide-range region of Huwe1. Interestingly, although depletion of Huwe1 in target cells did not affect the early phase of HIV-1 infection in a human T cell line, we found that infectivity of HIV-1 released from the Huwe1 knockdown cells was significantly augmented more than that of virus produced from control cells. The increase in infectivity occurred in proviral DNA synthesis. Further analysis revealed that Huwe1 interacted with HIV-1 Gag-Pol precursor protein through an IN domain. Our results suggest that Huwe1 in HIV-1 producer cells has a negative impact on early post-entry events during the next round of virus infection via association with an IN region of Gag-Pol., (Copyright © 2010 Institut Pasteur. Published by Elsevier SAS. All rights reserved.)
- Published
- 2011
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199. Ca2+-dependent release of Munc18-1 from presynaptic mGluRs in short-term facilitation.
- Author
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Nakajima Y, Mochida S, Okawa K, and Nakanishi S
- Subjects
- Animals, Estriol metabolism, Mice, Munc18 Proteins genetics, PC12 Cells, Protein Binding, Rats, Calcium metabolism, Estriol analogs & derivatives, Munc18 Proteins metabolism, Receptors, Metabotropic Glutamate metabolism, Synaptic Transmission
- Abstract
Short-term synaptic facilitation plays an important role in information processing in the central nervous system. Although the crucial requirement of presynaptic Ca(2+) in the expression of this plasticity has been known for decades, the molecular mechanisms underlying the plasticity remain controversial. Here, we show that presynaptic metabotropic glutamate receptors (mGluRs) bind and release Munc18-1 (also known as rbSec1/nSec1), an essential protein for synaptic transmission, in a Ca(2+)-dependent manner, whose actions decrease and increase synaptic vesicle release, respectively. We found that mGluR4 bound Munc18-1 with an EC(50) for Ca(2+) of 168 nM, close to the resting Ca(2+) concentration, and that the interaction was disrupted by Ca(2+)-activated calmodulin (CaM) at higher concentrations of Ca(2+). Consistently, the Munc18-1-interacting domain of mGluR4 suppressed both dense-core vesicle secretion from permeabilized PC12 cells and synaptic transmission in neuronal cells. Furthermore, this domain was sufficient to induce paired-pulse facilitation. Obviously, the role of mGluR4 in these processes was independent of its classical function of activation by glutamate. On the basis of these experimental data, we propose the following model: When neurons are not active, Munc18-1 is sequestered by mGluR4, and therefore the basal synaptic transmission is kept low. After the action potential, the increase in the Ca(2+) level activates CaM, which in turn liberates Munc18-1 from mGluR4, causing short-term synaptic facilitation. Our findings unite and provide a new insight into receptor signaling and vesicular transport, which are pivotal activities involved in a variety of cellular processes.
- Published
- 2009
- Full Text
- View/download PDF
200. Isolation and characterization of post-splicing lariat-intron complexes.
- Author
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Yoshimoto R, Kataoka N, Okawa K, and Ohno M
- Subjects
- Centrifugation, Density Gradient, HeLa Cells, Humans, RNA Helicases metabolism, RNA Splicing Factors, Ribonucleoproteins chemistry, Introns, Nuclear Proteins metabolism, RNA Splicing, Ribonucleoproteins isolation & purification
- Abstract
Pre-mRNA splicing occurs in a large complex spliceosome. The steps of both spliceosome assembly and splicing reaction have been extensively analyzed, and many of the factors involved have been identified. However, the post-splicing intron turnover process, especially in vertebrates, remains to be examined. In this paper, we developed a two-tag affinity purification method for purifying lariat intron RNA-protein complexes obtained from an in vitro splicing reaction. Glycerol gradient sedimentation analyses revealed that there are at least two forms of post-splicing intron complexes, which we named the 'Intron Large (IL)' and the 'Intron Small (IS)' complexes. The IL complex contains U2, U5 and U6 snRNAs and other protein splicing factors, whereas the IS complex contains no such U snRNAs or proteins. We also showed that TFIP11, a human homolog of yeast Ntr1, is present in the IL complex and the TFIP11 mutant protein, which lacks the interaction domain with hPrp43 protein, caused accumulation of the IL complex and reduction of IS complex formation in vitro. Taken together, our results strongly suggest that TFIP11 in cooperation with hPrp43 mediates the transition from the IL complex to the IS complex, leading to efficient debranching and turnover of excised introns.
- Published
- 2009
- Full Text
- View/download PDF
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