490 results on '"Loake, Gary J."'
Search Results
152. Identification of loci controlling non‐host disease resistance in Arabidopsis against the leaf rust pathogen Puccinia triticina
- Author
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SHAFIEI, REZA, primary, HANG, CUI, additional, KANG, JEONG‐GU, additional, and LOAKE, GARY J., additional
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- 2007
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153. A central role forS-nitrosothiols in plant disease resistance
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Feechan, Angela, primary, Kwon, Eunjung, additional, Yun, Byung-Wook, additional, Wang, Yiqin, additional, Pallas, Jacqueline A., additional, and Loake, Gary J., additional
- Published
- 2005
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154. A constitutive PR‐1::luciferase expression screen identifies Arabidopsis mutants with differential disease resistance to both biotrophic and necrotrophic pathogens
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MURRAY, SHANE L., primary, ADAMS, NICOLETTE, additional, KLIEBENSTEIN, DANIEL J., additional, LOAKE, GARY J., additional, and DENBY, KATHERINE J., additional
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- 2005
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155. Drought tolerance established by enhanced expression of theCC-NBS-LRRgene,ADR1, requires salicylic acid, EDS1 and ABI1
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Chini, Andrea, primary, Grant, John J., additional, Seki, Motoaki, additional, Shinozaki, Kazuo, additional, and Loake, Gary J., additional
- Published
- 2004
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156. Plant Biotechnology: The genetic manipulation of plants. A. Slater, N. Scott and M. Fowler. Oxford University Press. 2003. 346 pages. ISBN 0 19 9254680. Price £19.99 (paperback).
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LOAKE, GARY J., primary
- Published
- 2003
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157. Targeted Activation Tagging of the Arabidopsis NBS-LRR gene, ADR1, Conveys Resistance to Virulent Pathogens
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Grant, John J., primary, Chini, Andrea, additional, Basu, Debrabata, additional, and Loake, Gary J., additional
- Published
- 2003
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158. Loss of actin cytoskeletal function and EDS1 activity, in combination, severely compromises non-host resistance inArabidopsisagainst wheat powdery mildew
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Yun, Byung-Wook, primary, Atkinson, Helen A., additional, Gaborit, Charlotte, additional, Greenland, Andy, additional, Read, Nick D., additional, Pallas, Jacqueline A., additional, and Loake, Gary J., additional
- Published
- 2003
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159. Characterization of a Novel, Defense-Related Arabidopsis Mutant, cir1, Isolated By Luciferase Imaging
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Murray, Shane L., primary, Thomson, Catherine, additional, Chini, Andrea, additional, Read, Nick D., additional, and Loake, Gary J., additional
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- 2002
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160. Molecular cloning of a novel wound-induced gene from tomato:twi1
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Truesdale, Mark R., Doherty, Helen M., Loake, Gary J., McPherson, Michael J., Roberts, Michael, Bowles, Dianna J., Truesdale, Mark R., Doherty, Helen M., Loake, Gary J., McPherson, Michael J., Roberts, Michael, and Bowles, Dianna J.
- Abstract
Damage to a leaf of a tomato plant is known to lead to changes in gene expression. A number of wound-responsive genes have already been identified, including those that encode prosystemin (McGurl et al., 1992), proteinase inhibitors (pins) (Graham et al., 1986), leucine aminopeptidase, polyphenol oxidase (Hildman et al., 1992) and enzymes involved in ethylene biosynthesis (Holdsworth et al., 1988; Olsen et al., 1991; van der Straeten et al., 1990). It is probable however, that the wound stimulus will produce a wide range of signals and that the total number of genes that are up-regulated by injury is likely to be considerable. As a way to identify novel wound-responsive genes we have used differential screening of a cDNA library constructed in Lambda Zap II from polyA+ mRNA extracted from leaf tissue of 21 day old tomato plants (Lycopersicon esculentum cv. Money Maker), two hours after wounding. This report describes a novel gene which is expressed rapidly and transiently in wounded tissue. Differential screening of the cDNA library with first strand cDNA prepared from mRNA from wounded leaves and unwounded leaves led to the identification of one differentially expressed cDNA clone. This was subsequently used as a probe to re-screen the wounded leaf cDNA library. Several positive clones were identified, partially sequenced, and found to be identical. The complete sequence of the largest of these cDNAs was then obtained, and the gene named twi1 (tomato wound- induced 1). Searching of the databases of known sequences with the nucleotide and predicted amino acid sequence of twi1 revealed that twi1 has sequence similarity with glucosyl transferase genes from a variety of different organisms. It has significant homology to M. esculenta Crantz cDNAs, mecgt1 and mecgt5, encoding UDP-glucose glucosyl transferases (54.3% and 52.2% amino acid similarity respectively) (Hughes and Hughes, 1994), and a Zea mays glucosyl transferase, identified as IAA-glu synthetase (52.8% amino
- Published
- 1996
161. IDENTIFICATION OF T-DNA ACTIVATION TAGGED SYSTEMIC ACQUIRED RESISTANCE MUTANTS IN ARABIDOPSIS BY LUCIFERASE IMAGING
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Aboul-Soud, Mourad A. M., primary and Loake, Gary J., additional
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- 2000
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162. Agrobacterium tumefacies possesses a fourth flagellin gene located in a large gene cluster concerned with flagellar structure, assembly and motility
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Deakin, William J., Parker, Victoria E., Wright, Emma L., Ashcroft, Kevin J., Loake, Gary J., and Shaw, Charles H.
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Flagella (Microbiology) -- Research ,Agrobacterium tumefaciens -- Research ,Chromosomes -- Research ,Biological sciences - Abstract
A study was conducted to analyze a fourth flagellin gene in a 21850 bp region of the Agrobacterium tumefaciens C58C1 chromosome supporting at least 20 genes concerned with flagellar structure, assembly and function. Three flagellin genes were positioned in a tandem array at the right end. Results indicated that the flagellins contribute to flagellar structure. In addition, FlA has an anomolous electrophoretic mobility that ma be due to glycosylation.
- Published
- 1999
163. Differential utilization of regulatory cis-elements for stress-induced and tissue-specific activity of a French bean chalcone synthase promoter
- Author
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Faktor, Ouriel, primary, Kooter, Jan M., additional, Loake, Gary J., additional, Dixone, Richard A., additional, and Lamb, Chris J., additional
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- 1997
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164. Cross-talk of nitric oxide and reactive oxygen species in plant programed cell death.
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Yiqin Wang, Loake, Gary J., and Chengcai Chu
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NITRIC oxide ,APOPTOSIS ,CELL death ,PLANT-pathogen relationships ,PLANT cells & tissues ,PLANT chemical analysis ,PLANTS - Abstract
In plants, programed cell death (PCD) is an important mechanism to regulate multiple aspects of growth and development, as well as to remove damaged or infected cells during responses to environmental stresses and pathogen attacks. Under biotic and abiotic stresses, plant cells exhibit a rapid synthesis of nitric oxide (NO) and a parallel accumulation of reactive oxygen species (ROS). Frequently, these responses trigger a PCD process leading to an intrinsic execution of plant cells. The accumulating evidence suggests that both NO and ROS play key roles in PCD. These redox active small molecules can trigger cell death either independently or synergistically. Here we summarize the recent progress on the cross-talk of NO and ROS signals in the hypersensitive response, leaf senescence, and other kinds of plant PCD caused by diverse cues. [ABSTRACT FROM AUTHOR]
- Published
- 2013
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165. H2O2-induced Leaf Cell Death and the Crosstalk of Reactive Nitric/Oxygen SpeciesF H2O2-induced Leaf Cell Death and the Crosstalk of Reactive Nitric/Oxygen Species.
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Wang, Yiqin, Lin, Aihong, Loake, Gary J., and Chu, Chengcai
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PHYSIOLOGICAL effects of hydrogen peroxide ,LEAVES ,CELL death ,CROSSTALK ,PHYSIOLOGICAL effects of nitric oxide ,EFFECT of oxygen on plants ,PLANT species ,CHLOROPLASTS ,CATALASE ,PLANTS - Abstract
In plants, the chloroplast is the main reactive oxygen species (ROS) producing site under high light stress. Catalase (CAT), which decomposes hydrogen peroxide (H
2 O2 ), is one of the controlling enzymes that maintains leaf redox homeostasis. The catalase mutants with reduced leaf catalase activity from different plant species exhibit an H2 O2 -induced leaf cell death phenotype. This phenotype was differently affected by light intensity or photoperiod, which may be caused by plant species, leaf redox status or growth conditions. In the rice CAT mutant nitric oxide excess 1 ( noe1), higher H2 O2 levels induced the generation of nitric oxide (NO) and higher S-nitrosothiol (SNO) levels, suggesting that NO acts as an important endogenous mediator in H2 O2 -induced leaf cell death. As a free radical, NO could also react with other intracellular and extracellular targets and form a series of related molecules, collectively called reactive nitrogen species (RNS). Recent studies have revealed that both RNS and ROS are important partners in plant leaf cell death. Here, we summarize the recent progress on H2 O2 -induced leaf cell death and the crosstalk of RNS and ROS signals in the plant hypersensitive response (HR), leaf senescence, and other forms of leaf cell death triggered by diverse environmental conditions. [ABSTRACT FROM AUTHOR]- Published
- 2013
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166. Nitric Oxide and Protein S-Nitrosylation Are Integral Hydrogen Peroxide-Induced Leaf Cell Death in Rice1[W][OA].
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Aihong Lin, Yiqin Wang, Jiuyou Tang, Peng Xue, Chunlai Li, Linchuan Liu, Bin Hu, Fuquan Yang, Loake, Gary J., and Chengcai Chu
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CELL death ,NITRIC oxide ,PLANT growth ,PLANT development ,RICE diseases & pests ,LEAF diseases & pests ,PLANTS - Abstract
Nitric oxide (NO) is a key redox-active, small molecule involved in various aspects of plant growth and development. Here, we report the identification of an NO accumulation mutant, nitric oxide excess1 (noe1), in rice (Oryza sativa), the isolation of the corresponding gene, and the analysis of its role in NO-mediated leaf cell death. Map-based cloning revealed that NOE1 encoded a rice catalase, OsCATC. Furthermore, noel resulted in an increase of hydrogen peroxide (H
2 O2 ) in the leaves, which consequently promoted NO production via the activation of nitrate reductase. The removal of excess NO reduced cell death in both leaves and suspension cultures derived from noel plants, implicating NO as an important endogenous mediator of H2 O2 -induced leaf cell death. Reduction of intracellular S-nitrosothiol (SNO) levels, generated by overexpression office S-nitrosoglutathione reductase gene (GSNOR1), which regulates global levels of protein S-nitrosylation, alleviated leaf cell death in noel plants. Thus, S-nitrosylation was also involved in light-dependent leaf cell death in noel. Utilizing the bio in-switch assay, nanoliquid chromatography and tandem mass spectrometry S-nitrosylated proteins were identified in both wild-type and noel plants. NO targets identified only in noel plants included glyceraldehyde 3-phosphate dehydrogenase and that oredoxin, which have been reported to be involved in S-nitrosylation-regulated cell death in animals. Collectively our data suggest that both NO and SNOs are important mediators in the process of H2 O2 -induced leaf cell death in rice. [ABSTRACT FROM AUTHOR]- Published
- 2012
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167. Plant natural products: history, limitations and the potential of cambial meristematic cells.
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Byung-Wook Yun, Zejun Yan, Rabia Amir, Sunmi Hong, Young-Woo Jin, Eun-Kyong Lee, and Loake, Gary J.
- Abstract
The article discusses the importance of the isolation and culture of cambial meristematic cells (CMCs) in expanding the use of plant natural products. It notes that plant cell culture from the conventional dedifferentiation process has had limited industrial utility because of low and inconsistent yields. The authors note that CMC culture shows stable and higher-performance yields, offering greater opportunities for sustainable commercial production of plant natural products.
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- 2011
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168. Cultured cambial meristematic cells as a source of plant natural products.
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Eun-Kyong Lee, Young-Woo Jin, Joong Hyun Park, Young Mi Yoo, Sun Mi Hong, Amir, Rabia, Zejun Yan, Eunjung Kwon, Elfick, Alistair, Tomlinson, Simon, Halbritter, Florian, Waibel, Thomas, Byung-Wook Yun, and Loake, Gary J.
- Subjects
PLETHORA (Pathology) ,NATURAL products ,PLANT cell culture ,GENES ,STEM cells ,IRRADIATION - Abstract
A plethora of important, chemically diverse natural products are derived from plants. In principle, plant cell culture offers an attractive option for producing many of these compounds. However, it is often not commercially viable because of difficulties associated with culturing dedifferentiated plant cells (DDCs) on an industrial scale. To bypass the dedifferentiation step, we isolated and cultured innately undifferentiated cambial meristematic cells (CMCs). Using a combination of deep sequencing technologies, we identified marker genes and transcriptional programs consistent with a stem cell identity. This notion was further supported by the morphology of CMCs, their hypersensitivity to γ-irradiation and radiomimetic drugs and their ability to differentiate at high frequency. Suspension culture of CMCs derived from Taxus cuspidata, the source of the key anticancer drug, paclitaxel (Taxol), circumvented obstacles routinely associated with the commercial growth of DDCs. These cells may provide a cost-effective and environmentally friendly platform for sustainable production of a variety of important plant natural products. [ABSTRACT FROM AUTHOR]
- Published
- 2010
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169. Differential profiling of selected defence-related genes induced on challenge with Alternaria brassicicola in resistant white mustard and their comparative expression pattern in susceptible India mustard.
- Author
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GHOSE, KAUSHIK, DEY, SANJUKTA, BARTON, HANNAH, LOAKE, GARY J., and BASU, DEBABRATA
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PLANT diseases ,HEREDITY ,GENES ,BRASSICA ,MUSTARD ,ARABIDOPSIS ,GENETIC polymorphisms ,PROTEIN kinases - Abstract
The lack of availability of sources of resistance against Alternaria brassicicola within the family Brassicaceae has made oilseed mustard plants a target for one of the most damaging and widespread fungal diseases, Alternaria black spot. Of the other non-host-resistant/tolerant plants, Sinapis alba, white mustard, is considered to be the most important apart from Arabidopsis. To understand the defence response of S. alba upon incompatible interaction with this pathogen, a functional genomic approach using cDNA amplified fragment length polymorphism was performed. The highly reproducible bands, found to be either more amplified or uniquely present in infected S. alba plants compared with non-infected plants, were further subjected to comparative reverse Northern analysis in the incompatible white mustard ( S. alba) and compatible India mustard ( Brassica juncea L.) plants. The suppression of 46% of the genes in the compatible background indicates the possibility of effective and specific recognition of Alternaria in S. alba. Analysis of the 118 genes up-regulated specifically in infected S. alba compared with B. juncea showed that 98 genes have similarity to proteins such as receptor-like protein kinase genes, genes involved with calcium-mediated signalling and salicylic acid-dependent genes as well as other genes of known function in Arabidopsis. The apparent expression profile data were further confirmed for selected genes by quantitative real-time polymerase chain reaction analysis. Classification of these genes on the basis of their induction pattern in Arabidopsis indicates that the expression profile of several of these genes was distinct in S. alba compared with B. juncea. [ABSTRACT FROM AUTHOR]
- Published
- 2008
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170. Arabidopsis Mitogen-Activated Protein Kinase Kinases MKK1 and MKK2 Have Overlapping Functions in Defense Signaling Mediated by MEKK1, MPK4, and MKS1.
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Jin-Long Qiu, Zhou, Lu, Byung-Wook Yun, Nielsen, Henrik Bjørn, Fiil, Berthe Katrine, Petersen, Klaus, MacKinlay, Jim, Loake, Gary J., Mundy, John, and Morris, Peter C.
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ARABIDOPSIS thaliana ,MITOGEN-activated protein kinases ,GENE expression ,PHOSPHORYLATION ,JASMONIC acid ,GENETIC regulation - Abstract
The Arabidopsis (Arabidopsis thaliana) MKK1 and MKK2 mitogen-activated protein kinase kinases have been implicated in biotic and abiotic stress responses as part of a signaling cascade including MEKK1 and MPK4. Here, the double loss-of-function mutant (rnkkl/2) of MKKI and MKK2 is shown to have marked phenotypes in development and disease resistance similar to those of the single mekkl and inpk4 mutants. Because ink/cl or mkk2 single mutants appear wild type, basal levels of MPK4 activity are not impaired in them, and MKK1 and MKK2 are in part functionally redundant in unchallenged plants. These findings are confirmed and extended by biochemical and molecular analyses implicating the kinases in jasmonate- and salicylate-dependent defense responses, mediated in part via the MPK4 substrate MKS1. In addition, transcriptome analyses delineate overlapping and specific effects of the kinases on global gene expression patterns demonstrating both redundant and unique functions for MKK1 and MKK2. [ABSTRACT FROM AUTHOR]
- Published
- 2008
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171. Nitric oxide function and signalling in plant disease resistance.
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Jeum Kyu Hong, Byung-Wook Yun, Jeong-Gu Kang, Raja, Muhammad Usman, Eunjung Kwon, Sorhagen, Kirsti, Chengcai Chu, Yiqin Wang, and Loake, Gary J.
- Subjects
NITRIC oxide ,ENDOTHELIUM ,CELL death ,DISEASE resistance of plants ,BIOSYNTHESIS - Abstract
Nitric oxide (NO) is one of only a handful of gaseous signalling molecules. Its discovery as the endothelium-derived relaxing factor (EDRF) by Ignarro revolutionized how NO and cognate reactive nitrogen intermediates, which were previously considered to be toxic molecules, are viewed. NO is now emerging as a key signalling molecule in plants, where it orchestrates a plethora of cellular activities associated with growth, development, and environmental interactions. Prominent among these is its function in plant hypersensitive cell death and disease resistance. While a number of sources for NO biosynthesis have been proposed, robust and biologically relevant routes for NO production largely remain to be defined. To elaborate cell death during an incompatible plant–pathogen interaction NO functions in combination with reactive oxygen intermediates. Furthermore, NO has been shown to regulate the activity of metacaspases, evolutionary conserved proteases that may be intimately associated with pathogen-triggered cell death. NO is also thought to function in multiple modes of plant disease resistance by regulating, through S-nitrosylation, multiple nodes of the salicylic acid (SA) signalling pathway. These findings underscore the key role of NO in plant–pathogen interactions. [ABSTRACT FROM PUBLISHER]
- Published
- 2008
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172. S-Nitrosylation: an emerging redox-based post-translational modification in plants.
- Author
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Yiqin Wang, Byung-Wook Yun, EunJung Kwon, Jeum Kyu Hong, Joonseon Yoon, and Loake, Gary J.
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POST-translational modification ,PROTEIN synthesis ,GENETIC translation ,NITRIC oxide ,PLANTS - Abstract
S-nitrosylation, the covalent attachment of a nitric oxide moiety to a cysteine thiol, is now established as a key post-translational modification in animals. This process has been shown to regulate the function of a wide variety of regulatory, structural, and metabolic proteins. The emerging evidence now suggests that S-nitrosylation may also have a central function in plant biology. [ABSTRACT FROM PUBLISHER]
- Published
- 2006
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173. A central role for S-nitrosothiols in plant disease resistance.
- Author
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Feechan, Angela, Eunjung Kwon, Byung-Wook Yun, Yiqin Wang, Pallas, Jacqueline A., and Loake, Gary J.
- Subjects
GENETIC mutation ,PLANT diseases ,ARABIDOPSIS thaliana ,POISONOUS plants ,PATHOGENIC microorganisms ,SALICYLIC acid - Abstract
Animal S-nitrosoglutathione reductase (GSNOR) governs the extent of cellular S-nitrosylation, a key redox-based posttranslational modification. Mutations in AtGSNOR1, an Arabidopsis thaliana GSNOR, modulate the extent of cellular S-nitrosothiol (SNO) formation in this model plant species. Loss of AtGSNORI function increased SNO levels, disabling plant defense responses conferred by distinct resistance (R) gene subclasses. Furthermore, in the absence of AtGSNORI, both basal and non host disease resistance are also compromised. Conversely, increased AtGSNORI activity reduced SNO formation, enhancing protection against ordinarily virulent microbial pathogens. Here we demonstrate that AtGSNORI positively regulates the signaling network controlled by the plant immune system activator, salicylic acid. This contrasts with the function of this enzyme in mice during endotoxic shock, where GSNOR antagonizes inflammatory responses. Our data imply SNO formation and turnover regulate multiple modes of plant disease resistance. [ABSTRACT FROM AUTHOR]
- Published
- 2005
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174. A constitutivePR-1::luciferaseexpression screen identifies Arabidopsis mutants with differential disease resistance to both biotrophic and necrotrophic pathogens.
- Author
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Murray, Shane L., Adams, Nicolette, Kliebenstein, Daniel J., Loake, Gary J., and Denby, Katherine J.
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DISEASE resistance of plants ,PHYTOPATHOGENIC microorganisms ,PLANT-pathogen relationships ,PLANT defenses ,CELLULAR signal transduction ,ARABIDOPSIS ,PLANT genetics - Abstract
A complex signal transduction network involving salicylic acid, jasmonic acid and ethylene underlies disease resistance inArabidopsis. To understand this defence signalling network further, we identified mutants that expressed the marker genePR-1::luciferasein the absence of pathogen infection. Thesecirmutants all display constitutive expression of a suite of defence-related genes but exhibit different disease resistance profiles to two biotrophic pathogens,Pseudomonas syringaepv.tomatoandPeronospora parasiticaNOCO2, and the necrotrophic pathogenBotrytis cinerea. We further characterizedcir3, which displays enhanced resistance only to the necrotrophic pathogen.Cir3-mediated resistance toB. cinereais dependent on accumulated salicylic acid and a functional EIN2 protein. [ABSTRACT FROM AUTHOR]
- Published
- 2005
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175. Expanding roles for S-nitrosylation in the regulation of plant immunity.
- Author
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Borrowman, Sam, Kapuganti, Jagadis Gupta, and Loake, Gary J.
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DISEASE resistance of plants , *IMMUNOREGULATION , *PROTEIN S , *REACTIVE oxygen species , *IMMUNE response , *OXIDATION-reduction reaction - Abstract
Following pathogen recognition, plant cells produce a nitrosative burst resulting in a striking increase in nitric oxide (NO), altering the redox state of the cell, which subsequently helps orchestrate a plethora of immune responses. NO is a potent redox cue, efficiently relayed between proteins through its co-valent attachment to highly specific, powerfully reactive protein cysteine (Cys) thiols, resulting in formation of protein S -nitrosothiols (SNOs). This process, known as S -nitrosylation, can modulate the function of target proteins, enabling responsiveness to cellular redox changes. Key targets of S -nitrosylation control the production of reactive oxygen species (ROS), the transcription of immune-response genes, the triggering of the hypersensitive response (HR) and the establishment of systemic acquired resistance (SAR). Here, we bring together recent advances in the control of plant immunity by S -nitrosylation, furthering our appreciation of how changes in cellular redox status reprogramme plant immune function. [Display omitted] • S -nitrosylation is emerging as a key redox-based, post-translation modification. • Global protein S -nitrosylation is regulated indirectly by GSNOR and directly by TRXh5 during plant immune function. • Nitric oxide bioactivity modulates transcriptional and epigenetic mechanisms. • S -nitrosylation regulates SUMOylation during plant immunity. • Host directed S -nitrosylation blunts pathogen effector functions. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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- View/download PDF
176. Feedback loop promotes sucrose accumulation in cotyledons to facilitate sugar-ethylene signaling-mediated, etiolated-seedling greening
- Author
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Mu, Xin-Rong, Tong, Chen, Fang, Xing-Tang, Bao, Qin-Xin, Xue, Li-Na, Meng, Wei-Ying, Liu, Chang-Yue, Loake, Gary J., Cao, Xiao-Ying, Jiang, Ji-Hong, and Meng, Lai-Sheng
- Abstract
De-etiolation is indispensable for seedling survival and development. However, how sugars regulate de-etiolation and how sugars induce ethylene (ET) for seedlings to grow out of soil remain elusive. Here, we reveal how a sucrose (Suc) feedback loop promotes de-etiolation by inducing ET biosynthesis. Under darkness, Suc in germinating seeds preferentially induces 1-amino-cyclopropane-1-carboxylate synthase(ACS7; encoding a key ET biosynthesis enzyme) and associated ET biosynthesis, thereby activating ET core component ETHYLENE-INSENSITIVE3 (EIN3). Activated EIN3 directly inhibits the function of Suc transporter 2 (SUC2; a major Suc transporter) to block Suc export from cotyledons and thereby elevate Suc accumulation of cotyledons to induce ET. Under light, ET-activated EIN3 directly inhibits the function of phytochrome A (phyA; a de-etiolation inhibitor) to promote de-etiolation. We therefore propose that under darkness, the Suc feedback loop (Suc-ACS7-EIN3-|SUC2-Suc) promotes Suc accumulation in cotyledons to guarantee ET biosynthesis, facilitate de-etiolation, and enable seedlings to grow out of soil.
- Published
- 2022
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177. Interorgan, intraorgan and interplant communication mediated by nitric oxide and related species.
- Author
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Kolbert, Zsuzsanna, Barroso, Juan B., Boscari, Alexandre, Corpas, Francisco J., Gupta, Kapuganti Jagadis, Hancock, John T., Lindermayr, Christian, Palma, José Manuel, Petřivalský, Marek, Wendehenne, David, and Loake, Gary J.
- Subjects
- *
REACTIVE nitrogen species , *HYDROGEN sulfide , *CROP improvement , *NITRIC oxide , *INVECTIVE - Abstract
Summary: Plant survival to a potential plethora of diverse environmental insults is underpinned by coordinated communication amongst organs to help shape effective responses to these environmental challenges at the whole plant level. This interorgan communication is supported by a complex signal network that regulates growth, development and environmental responses. Nitric oxide (NO) has emerged as a key signalling molecule in plants. However, its potential role in interorgan communication has only recently started to come into view. Direct and indirect evidence has emerged supporting that NO and related species (S‐nitrosoglutathione, nitro‐linolenic acid) are mobile interorgan signals transmitting responses to stresses such as hypoxia and heat. Beyond their role as mobile signals, NO and related species are involved in mediating xylem development, thus contributing to efficient root–shoot communication. Moreover, NO and related species are regulators in intraorgan systemic defence responses aiming an effective, coordinated defence against pathogens. Beyond its in planta signalling role, NO and related species may act as ex planta signals coordinating external leaf‐to‐leaf, root‐to‐leaf but also plant‐to‐plant communication. Here, we discuss these exciting developments and emphasise how their manipulation may provide novel strategies for crop improvement. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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- View/download PDF
178. The chloroplast‐localized casein kinase II α subunit, CPCK2, negatively regulates plant innate immunity through promoting S‐nitrosylation of SABP3.
- Author
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Rui, Lu, Kang, Ping, Shao, Jing, Lu, Minfeng, Cui, Beimi, Zhao, Yaofei, Wang, Wei, Cai, Huiren, Tang, Dingzhong, Loake, Gary J., Wang, Mo, and Shi, Hua
- Subjects
- *
DISEASE resistance of plants , *CARBONIC anhydrase , *SALICYLIC acid , *NATURAL immunity , *PSEUDOMONAS syringae - Abstract
SUMMARY: The casein kinase II (CK2) complex consists of catalytic (α) and regulatory (β) subunits and is highly conserved throughout eukaryotes. Plant CK2 plays critical roles in multiple physiological processes; however, its function in plant immunity remains obscure. In this study, we demonstrated that the unique chloroplast‐localized CK2 α subunit (CPCK2) is a negative regulator of Arabidopsis thaliana innate immunity. cpck2 mutants displayed enhanced resistance against the fungal pathogen powdery mildew, Golovinomyces cichoracearum and the virulent bacterial pathogen, Pseudomonas syringae pv. tomato (Pto) DC3000. Moreover, the cpck2‐1 mutant accumulated higher salicylic acid (SA) levels and mutations that disabled SA biosynthesis or signaling inhibited cpck2‐1‐mediated disease resistance. CPCK2 interacted with the chloroplast‐localized carbonic anhydrase (CA), SA‐binding protein 3 (SABP3), which was required for cpck2‐mediated immunity. Significantly, CPCK2 phosphorylated SABP3, which promoted S‐nitrosylation of this enzyme. It has previously been established that S‐nitrosylation of SABP3 reduces both its SA binding function and its CA activity, which compromises the immune‐related function of SABP3. Taken together, our results establish CPCK2 as a negative regulator of SA accumulation and associated immunity. Importantly, our findings unveil a mechanism by which CPCK2 negatively regulates plant immunity by promoting S‐nitrosylation of SABP3 through phosphorylation, which provides the first example in plants of S‐nitrosylation being promoted by cognate phosphorylation. Significance Statement: CPCK2, a chloroplast‐localized casein kinase II α subunit, plays a negative role in plant innate immunity. CPCK2 directly interacted with and phosphorylated SA‐binding protein 3 (SABP3) to enhance the S‐nitrosylation status of SABP3, implying a potential mechanism by which CPCK2 negatively regulates plant immunity by promoting S‐nitrosylation of SABP3 through phosphorylation, which is the first example in plants of S‐nitrosylation being promoted by cognate phosphorylation. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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179. Glucose- and sucrose-signaling modules regulate the Arabidopsis juvenile-to-adult phase transition.
- Author
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Meng, Lai-Sheng, Bao, Qin-Xin, Mu, Xin-Rong, Tong, Chen, Cao, Xiao-Ying, Huang, Jin-Jin, Xue, Li-Na, Liu, Chang-Yue, Fei, Yue, and Loake, Gary J.
- Abstract
CINV1, converting sucrose into glucose and fructose, is a key entry of carbon into cellular metabolism, and HXK1 functions as a pivotal sensor for glucose. Exogenous sugars trigger the Arabidopsis juvenile-to-adult phase transition via a miR156A/SPL module. However, the endogenous factors that regulate this process remain unclear. In this study, we show that sucrose specifically induced the PAP1 transcription factor directly and positively controls CINV1 activity. Furthermore, we identify a glucose feed-forward loop (sucrose-CINV1-glucose-HXK1-miR156-SPL9-PAP1-CINV1-glucose) that controls CINV1 activity to convert sucrose into glucose signaling to dynamically control the juvenile-to-adult phase transition. Moreover, PAP1 directly binds to the SPL9 promoter, activating SPL9 expression and triggering the sucrose-signaling-mediated juvenile-to-adult phase transition. Therefore, a glucose-signaling feed-forward loop and a sucrose-signaling pathway synergistically regulate the Arabidopsis juvenile-to-adult phase transition. Collectively, we identify a molecular link between the major photosynthate sucrose, the entry point of carbon into cellular metabolism, and the plant juvenile-to-adult phase transition. [Display omitted] • CINV1/2 are key endogenous factors that control the Arabidopsis juvenile-to-adult transition • A glucose-signaling feed-forward loop dynamically controls the juvenile-to-adult transition • A sucrose-signaling pathway regulates the juvenile-to-adult transition Meng et al. identify a glucose-signaling feed-forward loop and a sucrose-signaling pathway that synergistically regulate the Arabidopsis juvenile-to-adult transition. This glucose feed-forward loop controls CINV1 activity to convert sucrose into glucose signaling to dynamically control juvenile-to-adult transition. [ABSTRACT FROM AUTHOR]
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- 2021
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180. Glucose- and sucrose-signaling modules regulate the Arabidopsisjuvenile-to-adult phase transition
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Meng, Lai-Sheng, Bao, Qin-Xin, Mu, Xin-Rong, Tong, Chen, Cao, Xiao-Ying, Huang, Jin-Jin, Xue, Li-Na, Liu, Chang-Yue, Fei, Yue, and Loake, Gary J.
- Abstract
CINV1, converting sucrose into glucose and fructose, is a key entry of carbon into cellular metabolism, and HXK1 functions as a pivotal sensor for glucose. Exogenous sugars trigger the Arabidopsisjuvenile-to-adult phase transition via a miR156A/SPL module. However, the endogenous factors that regulate this process remain unclear. In this study, we show that sucrose specifically induced the PAP1 transcription factor directly and positively controls CINV1 activity. Furthermore, we identify a glucose feed-forward loop (sucrose-CINV1-glucose-HXK1-miR156-SPL9-PAP1-CINV1-glucose) that controls CINV1 activity to convert sucrose into glucose signaling to dynamically control the juvenile-to-adult phase transition. Moreover, PAP1 directly binds to the SPL9promoter, activating SPL9expression and triggering the sucrose-signaling-mediated juvenile-to-adult phase transition. Therefore, a glucose-signaling feed-forward loop and a sucrose-signaling pathway synergistically regulate the Arabidopsisjuvenile-to-adult phase transition. Collectively, we identify a molecular link between the major photosynthate sucrose, the entry point of carbon into cellular metabolism, and the plant juvenile-to-adult phase transition.
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- 2021
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181. ABSCISIC ACID-INSENSITIVE 5-KIP-RELATED PROTEIN 1-SHOOT MERISTEMLESS modulates reproductive development of Arabidopsis.
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Wang, Wan-Ni, Wei, Yu-Ting, Zhao, Sheng-Ting, Yu, Fu-Huan, Wang, Jing-wen, Gu, Cheng-yue, Liu, Xin-Ran, Sai, Na, Zhu, Jin-Lei, Wang, Qi-Meng, Bao, Qin-Xin, Mu, Xin-Rong, Liu, Yu-xin, Loake, Gary J, Jiang, Ji-hong, and Meng, Lai-Sheng
- Abstract
Soil (or plant) water deficit accelerates plant reproduction. However, the underpinning molecular mechanisms remain unknown. By modulating cell division/number, ABSCISIC ACID-INSENSITIVE 5 (ABI5), a key bZIP (basic (region) leucine zippers) transcription factor, regulates both seed development and abiotic stress responses. The KIP-RELATED PROTEIN (KRP) cyclin-dependent kinases (CDKs) play an essential role in controlling cell division, and SHOOT MERISTEMLESS (STM) plays a key role in the specification of flower meristem identity. Here, our findings show that abscisic acid (ABA) signaling and/or metabolism in adjust reproductive outputs (such as rosette leaf number and open flower number) under water-deficient conditions in Arabidopsis (Arabidopsis thaliana) plants. Reproductive outputs increased under water-sufficient conditions but decreased under water-deficient conditions in the ABA signaling/metabolism mutants abscisic acid2-1 (aba2-1), aba2-11, abscisic acid insensitive3-1 (abi3-1), abi4-1, abi5-7, and abi5-8. Further, under water-deficient conditions, ABA induced-ABI5 directly bound to the promoter of KRP1, which encodes a CDK that plays an essential role in controlling cell division, and this binding subsequently activated KRP1 expression. In turn, KRP1 physically interacted with STM, which functions in the specification of flower meristem identity, promoting STM degradation. We further demonstrate that reproductive outputs are adjusted by the ABI5–KRP1–STM molecular module under water-deficient conditions. Together, our findings reveal the molecular mechanism by which ABA signaling and/or metabolism regulate reproductive development under water-deficient conditions. These findings provide insights that may help guide crop yield improvement under water deficiency. Abscisic acid (ABA) signaling regulates reproductive development under water-deficient conditions in Arabidopsis via ABA- and meristem-related transcription factors and a cyclin-dependent kinase. [ABSTRACT FROM AUTHOR]
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- 2024
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182. Improvement of both human and animal memory by synergy between fructooligosaccharide and L‐theanine function establishing a safe and effective food supplement.
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Li, Yuan, Jiang, Yuying, Zhang, Zubing, Loake, Verity I. P., Bao, Xu, and Loake, Gary J.
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MEMORY , *ANIMAL memory , *COGNITIVE ability , *MEMORY loss , *MILD cognitive impairment - Abstract
Aging is classically associated with a decline of cognitive abilities, especially in relation to memory. While the development of potential treatments for neurodegenerative diseases has been in sharp focus, mild cognitive impairment (MCI), a form of age‐related memory loss, in the absence of severe functional impairment, a condition experienced by many healthy adults, has received relatively little attention. Advances in this space would make significant contributions to the goal of healthy aging and may also help promote cognitive performance across the wider population. The individual action of either fructooligosaccharide (FOS) or L‐theanine, both natural plant‐derived molecules, has been tentatively linked with improvements in cognition, but our understanding remains far from complete. We therefore determined the effect of different dose combinations of FOS and L‐theanine (termed MT‐01/GBL‐Memory1) in mice against FOS and L‐theanine monotherapy. FOS and L‐theanine were found to synergistically enhance murine memory in our animal tests at a dose of 100 mg/kg (coefficient of drug interaction (CDI) < 1). In a subsequent human trial, we demonstrated that MT‐01 improved the memory of healthy adults after 1 month of consumption. Our results suggest that a combination of FOS and L‐theanine synergistically enhances murine memory within a specific dose range. We show that this plant natural product regimen also improves human memory in a population of healthy adults. MT‐01 therefore represents a novel, safe, and effective dietary supplement to promote human memory and cognition. [ABSTRACT FROM AUTHOR]
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- 2024
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183. S-nitrosylation of the zinc finger protein SRG1 regulates plant immunity.
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Cui, Beimi, Pan, Qiaona, Clarke, David, Villarreal, Marisol Ochoa, Umbreen, Saima, Yuan, Bo, Shan, Weixing, Jiang, Jihong, and Loake, Gary J.
- Abstract
Nitric oxide (NO) orchestrates a plethora of incongruent plant immune responses, including the reprograming of global gene expression. However, the cognate molecular mechanisms remain largely unknown. Here we show a zinc finger transcription factor (ZF-TF), SRG1, is a central target of NO bioactivity during plant immunity, where it functions as a positive regulator. NO accumulation promotes SRG1 expression and subsequently SRG1 occupies a repeated canonical sequence within target promoters. An EAR domain enables SRG1 to recruit the corepressor TOPLESS, suppressing target gene expression. Sustained NO synthesis drives SRG1 S-nitrosylation predominantly at Cys87, relieving both SRG1 DNA binding and transcriptional repression activity. Accordingly, mutation of Cys87 compromises NO-mediated control of SRG1-dependent transcriptional suppression. Thus, the SRG1-SNO formation may contribute to a negative feedback loop that attenuates the plant immune response. SRG1 Cys87 is evolutionary conserved and thus may be a target for redox regulation of ZF-TF function across phylogenetic kingdoms. Upon pathogen infection plants accumulate nitric oxide which subsequently regulates defence gene expression. Here, the authors show that S-nitrosylation of the zinc finger transcription factor SRG1 affects transcriptional suppression and contributes to activation of defence responses. [ABSTRACT FROM AUTHOR]
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- 2018
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184. The emerging roles of nitric oxide and its associated scavengers—phytoglobins—in plant symbiotic interactions.
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Pathak, Pradeep Kumar, Yadav, Nidhi, Kaladhar, Vemula Chandra, Jaiswal, Rekha, Kumari, Aprajita, Igamberdiev, Abir U, Loake, Gary J, and Gupta, Kapuganti Jagadis
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NITRIC oxide , *PLANT-bacterial symbiosis , *HEMOGLOBINS , *SMALL molecules , *RHIZOBIUM , *PLANT growth , *HOMEOSTASIS - Abstract
A key feature in the establishment of symbiosis between plants and microbes is the maintenance of the balance between the production of the small redox-related molecule, nitric oxide (NO), and its cognate scavenging pathways. During the establishment of symbiosis, a transition from a normoxic to a microoxic environment often takes place, triggering the production of NO from nitrite via a reductive production pathway. Plant hemoglobins [phytoglobins (Phytogbs)] are a central tenant of NO scavenging, with NO homeostasis maintained via the Phytogb–NO cycle. While the first plant hemoglobin (leghemoglobin), associated with the symbiotic relationship between leguminous plants and bacterial Rhizobium species, was discovered in 1939, most other plant hemoglobins, identified only in the 1990s, were considered as non-symbiotic. From recent studies, it is becoming evident that the role of Phytogbs1 in the establishment and maintenance of plant–bacterial and plant–fungal symbiosis is also essential in roots. Consequently, the division of plant hemoglobins into symbiotic and non-symbiotic groups becomes less justified. While the main function of Phytogbs1 is related to the regulation of NO levels, participation of these proteins in the establishment of symbiotic relationships between plants and microorganisms represents another important dimension among the other processes in which these key redox-regulatory proteins play a central role. [ABSTRACT FROM AUTHOR]
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- 2024
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185. Glucose status within dark-grown etiolated cotyledons determines seedling de-etiolation upon light irradiation.
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Mu, Xin-Rong, Wang, Yi-Bo, Bao, Qin-Xin, Wei, Yu-Ting, Zhao, Sheng-Ting, Tao, Wen-Zhe, Liu, Yu-Xin, Wang, Wan-Ni, Yu, Fu-Huan, Tong, Chen, Wang, Jing-Wen, Gu, Cheng-Yue, Wang, Qi-Meng, Liu, Xin-Ran, Sai, Na, Zhu, Jin-Lei, Zhang, Jian, Loake, Gary J, and Meng, Lai-Sheng
- Abstract
Exposure of dark-grown etiolated seedlings to light triggers the transition from skotomorphogenesis/etiolation to photomorphogenesis/de-etiolation. In the life cycle of plants, de-etiolation is essential for seedling development and plant survival. The mobilization of soluble sugars (glucose [Glc], sucrose, and fructose) derived from stored carbohydrates and lipids to target organs, including cotyledons, hypocotyls, and radicles, underpins de-etiolation. Therefore, dynamic carbohydrate biochemistry is a key feature of this phase transition. However, the molecular mechanisms coordinating carbohydrate status with the cellular machinery orchestrating de-etiolation remain largely opaque. Here, we show that the Glc sensor HEXOKINASE 1 (HXK1) interacts with GROWTH REGULATOR FACTOR5 (GRF5), a transcriptional activator and key plant growth regulator, in Arabidopsis (Arabidopsis thaliana). Subsequently, GRF5 directly binds to the promoter of phytochrome A (phyA), encoding a far-red light (FR) sensor/cotyledon greening inhibitor. We demonstrate that the status of Glc within dark-grown etiolated cotyledons determines the de-etiolation of seedlings when exposed to light irradiation by the HXK1–GRF5–phyA molecular module. Thus, following seed germination, accumulating Glc within dark-grown etiolated cotyledons stimulates a HXK1-dependent increase of GRF5 and an associated decrease of phyA, triggering the perception, amplification, and relay of HXK1-dependent Glc signaling, thereby facilitating the de-etiolation of seedlings following light irradiation. Our findings, therefore, establish how cotyledon carbohydrate signaling under subterranean darkness is sensed, amplified, and relayed, determining the phase transition from skotomorphogenesis to photomorphogenesis on exposure to light irradiation. This study reveals how sugar signaling under subterranean darkness is sensed, amplified, and relayed to determine skototophotomorphogenesis upon exposure to light irradiation. [ABSTRACT FROM AUTHOR]
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- 2024
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186. New insights into nitric oxide biosynthesis underpin lateral root development.
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Gupta, Kapuganti Jagadis, Yadav, Nidhi, Kumari, Aprajita, and Loake, Gary J.
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- 2024
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187. Sugar status in preexisting leaves determines systemic stomatal development within newly developing leaves.
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Qin-Xin Bao, Xin-Rong Mu, Chen Tong, Cong Li, Wen-Zhe Tao, Sheng-Ting Zhao, Yu-xin Liu, Wan-Ni Wang, Yu-ting Wei, Fu-Huan Yu, Jing-wen Wang, Zhi-Lan Sun, Bing-Ling Fan, Jia Sun, Chen Wang, Loake, Gary J., and Lai-Sheng Meng
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STOMATA , *GAS exchange in plants , *NUTRIENT uptake , *SUGAR , *WATER-gas - Abstract
Stomata are pores found in the epidermis of stems or leaves that modulate both plant gas exchange and water/nutrient uptake. The development and function of plant stomata are regulated by a diverse range of environmental cues. However, how carbohydrate status in preexisting leaves might determine systemic stomatal formation within newly developing leaves has remained obscure. The glucose (Glc) sensor HEXOKINASE1 (HXK1) has been reported to decrease the stability of an ethylene/Glc signaling transcriptional regulator, EIN3 (ETHYLENE INSENSITIVE3). EIN3 in turn directly represses the expression of SUC2 (sucrose transporter 2), encoding a master transporter of sucrose (Suc). Further, KIN10, a nuclear regulator involved in energy homeostasis, has been reported to repress the transcription factor SPCH (SPEECHLESS), a master regulator of stomatal development. Here, we demonstrate that the Glc status of preexisting leaves determines systemic stomatal development within newly developing leaves by the HXK1--¦EIN3--¦SUC2 module. Further, increasing Glc levels in preexisting leaves results in a HXK1-dependent decrease of EIN3 and increase of SUC2, triggering the perception, amplification and relay of HXK1-dependent Glc signaling and thereby triggering Suc transport from mature to newly developing leaves. The HXK1--¦EIN3--¦SUC2 molecular module thereby drives systemic Suc transport from preexisting leaves to newly developing leaves. Subsequently, increasing Suc levels within newly developing leaves promotes stomatal formation through the established KIN10→SPCH module. Our findings thus show how a carbohydrate signal in preexisting leaves is sensed, amplified and relayed to determine the extent of systemic stomatal development within newly developing leaves. [ABSTRACT FROM AUTHOR]
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- 2023
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188. The Biological Roles of Puccinia striiformis f. sp. tritici Effectors during Infection of Wheat.
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Wang, Junjuan, Chen, Tongtong, Tang, Yawen, Zhang, Sihan, Xu, Mengyao, Liu, Meiyan, Zhang, Jian, Loake, Gary J., and Jiang, Jihong
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STRIPE rust , *PUCCINIA striiformis , *WHEAT , *WHEAT rusts , *BOTANICAL chemistry , *PHYTOPATHOGENIC microorganisms , *RUST diseases , *POWDERY mildew diseases - Abstract
Puccinia striiformis f. sp. tritici (Pst) is the causative agent of wheat stripe rust, which can lead to a significant loss in annual wheat yields. Therefore, there is an urgent need for a deeper comprehension of the basic mechanisms underlying Pst infection. Effectors are known as the agents that plant pathogens deliver into host tissues to promote infection, typically by interfering with plant physiology and biochemistry. Insights into effector activity can significantly aid the development of future strategies to generate disease-resistant crops. However, the functional analysis of Pst effectors is still in its infancy, which hinders our understanding of the molecular mechanisms of the interaction between Pst and wheat. In this review, we summarize the potential roles of validated and proposed Pst effectors during wheat infection, including proteinaceous effectors, non-coding RNAs (sRNA effectors), and secondary metabolites (SMs effectors). Further, we suggest specific countermeasures against Pst pathogenesis and future research directions, which may promote our understanding of Pst effector functions during wheat immunity attempts. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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189. <e1>Plant Biotechnology: The genetic manipulation of plants</e1>. A. Slater, N. Scott and M. Fowler. Oxford University Press. 2003. 346 pages. ISBN 0 19 9254680. Price £19.99 (paperback).
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LOAKE, GARY J.
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- 2003
190. Genome-wide characterization of RR gene family members in Zanthoxylum armatum and the subsequent functional characterization of the C-type RR.
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Hui, Wenkai, Wu, Han, Zheng, Hao, Wang, Kai, Yang, Ting, Fan, Jiangtao, Wu, Jiaojiao, Wang, Jingyan, Al Mutairi, Ahmed A., Yang, Hua, Yang, Chunlin, Cui, Beimi, Loake, Gary J., and Gong, Wei
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CLONORCHIS sinensis , *GENE families , *BINDING sites , *PLANT growth , *PLANT regulators - Abstract
Response Regulators (RRs) are crucial regulators in plant development and stress responses, comprising A-type, B-type, C-type, and pseudo- RR subfamilies. However, previous studies have often focused on specific subfamilies, which restricts our understanding of the complete RR gene family. In this study, we conducted a comprehensive analysis of 63 RR members from Zanthoxylum armatum , using phylogenetic relationships, motif composition, cis -acting elements, gene duplication and collinearity analyses. Segmental repeats among ZaRR genes enhanced the various environmental adaptabilities of Z. armatum , and the B-type ZaRR exhibited significant collinearity with the RR s in P. trichocarpa and C. sinensis. Cis-element analysis indicated ZaRR s play a significant role in abiotic stress and phytohormone pathways, particularly in light, drought, cold, abscisic acid (ABA) and salicylic acid (SA) responses. Abundant Ethylene Response Factor (ERF) and reproduction-associated binding sites in ZaRR promoters suggested their roles in stress and reproductive processes. A-type ZaRR s were implicated in plant vegetative and reproductive growth, whereas B-type ZaRR s contributed to both growth and stress responses. C-type ZaRRs were associated with plant reproductive growth, whereas pseudo- RRs may function in plant stress responses, such as water logging, cold, and response to ethylene (ETH), SA, and jasmonic acid (JA). Ectopic expression of ZaRR24 , a C-type RR , inhibits growth, induces early flowering, and shortens fruit length in Arabidopsis. ZaRR24 overexpression also affected the expression of A- and B-type RR s, as well as floral meristem and organ identity genes. These findings establish a solid and comprehensive foundation for RR gene research in Z. armatum , and provide a platform for investigating signal transduction in other woody plants. • A total of 63 ZaARR members underwent a genome-wide investigation. • Tandem and segmental duplications driven the ZaARR family expansion. • The four ZaARR subfamilies had diverse roles in plant growth and stress responses. • ZaARR24 inhibited plant growth, A- and B-type ARRs , and floral differentiation genes. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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191. Long-distance transport of sucrose in source leaves promotes sink root growth by the EIN3-SUC2 module.
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Tong, Chen, Li, Cong, Cao, Xiao-Ying, Sun, Xu-Dong, Bao, Qin-Xin, Mu, Xin-Rong, Liu, Chang-Yue, Loake, Gary J., Chen, Hu-hui, and Meng, Lai-Sheng
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ROOT growth , *ETHYLENE , *SUCROSE , *GLUCOKINASE , *TRANSCRIPTION factors , *PHLOEM , *GLUCOSE - Abstract
In most plants, sucrose, a major storage sugar, is transported into sink organs to support their growth. This key physiological process is dependent on the function of sucrose transporters. Sucrose export from source tissues is predominantly controlled through the activity of SUCROSE TRANSPORTER 2 (SUC2), required for the loading of sucrose into the phloem of Arabidopsis plants. However, how SUC2 activity is controlled to support root growth remains unclear. Glucose is perceived via the function of HEXOKINASE 1 (HXK1), the only known nuclear glucose sensor. HXK1 negatively regulates the stability of ETHYLENE-INSENSITIVE3 (EIN3), a key ethylene/glucose interaction component. Here we show that HXK1 functions upstream of EIN3 in the regulation of root sink growth mediated by glucose signaling. Furthermore, the transcription factor EIN3 directly inhibits SUC2 activity by binding to the SUC2 promoter, regulating glucose signaling linked to root sink growth. We demonstrate that these molecular components form a HXK1-EIN3-SUC2 module integral to the control of root sink growth. Also, we demonstrate that with increasing age, the HXK1-EIN3-SUC2 module promotes sucrose phloem loading in source tissues thereby elevating sucrose levels in sink roots. As a result, glucose signaling mediated-sink root growth is facilitated. Our findings thus establish a direct molecular link between the HXK1-EIN3-SUC2 module, the source-to sink transport of sucrose and root growth. Author summary: In Arabidopsis and most crops, sucrose transporters are positioned in the vascular bundles of leaf blades where they have crucial roles in balancing source and sink activities. However, little molecular detail is currently available regarding the modulation of sucrose transporter activity. Here, we demonstrate that the transcriptional regulator, EIN3, functions downstream of HEXOKINASE 1 (HXK1), which acts upstream of SUC2 in the regulation of root sink growth mediated by glucose signaling. Further, EIN3 directly represses SUC2 function by negatively regulating SUC2 transcription. We further demonstrate that these components form the HXK1-EIN3-SUC2 module to facilitate sucrose phloem loading in source tissues thereby elevating sucrose content in sink roots. [ABSTRACT FROM AUTHOR]
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- 2022
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192. Nitric oxide‐releasing nanomaterials: from basic research to potential biotechnological applications in agriculture.
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Seabra, Amedea B., Silveira, Neidiquele M., Ribeiro, Rafael V., Pieretti, Joana C., Barroso, Juan B., Corpas, Francisco J., Palma, José M., Hancock, John T., Petřivalský, Marek, Gupta, Kapuganti J., Wendehenne, David, Loake, Gary J., Durner, Jorg, Lindermayr, Christian, Molnár, Árpád, Kolbert, Zsuzsanna, and Oliveira, Halley C.
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AGRICULTURAL technology , *NANOSTRUCTURED materials , *TRADITIONAL farming , *NITRIC oxide , *NANOSCIENCE , *SCIENTIFIC community - Abstract
Summary: Nitric oxide (NO) is a multifunctional gaseous signal that modulates the growth, development and stress tolerance of higher plants. NO donors have been used to boost plant endogenous NO levels and to activate NO‐related responses, but this strategy is often hindered by the relative instability of donors. Alternatively, nanoscience offers a new, promising way to enhance NO delivery to plants, as NO‐releasing nanomaterials (e.g. S‐nitrosothiol‐containing chitosan nanoparticles) have many beneficial physicochemical and biochemical properties compared to non‐encapsulated NO donors. Nano NO donors are effective in increasing tissue NO levels and enhancing NO effects both in animal and human systems. The authors believe, and would like to emphasize, that new trends and technologies are essential for advancing plant NO research and nanotechnology may represent a breakthrough in traditional agriculture and environmental science. Herein, we aim to draw the attention of the scientific community to the potential of NO‐releasing nanomaterials in both basic and applied plant research as alternatives to conventional NO donors, providing a brief overview of the current knowledge and identifying future research directions. We also express our opinion about the challenges for the application of nano NO donors, such as the environmental footprint and stakeholder's acceptance of these materials. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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193. Post-translational protein modification as a tool for transcription reprogramming.
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Spoel, Steven H., Tada, Yasuomi, and Loake, Gary J.
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TRANSCRIPTION factors , *BIOSYNTHESIS , *GENETIC regulation in plants , *GENE expression in plants , *PLANT genomes , *PLANT proteins , *PLANT enzymes , *CYSTEINE proteinases , *POST-translational modification - Abstract
Precise modulation of transcription plays a vital role in both development and the response of all higher organisms to their environment. Temporal activation or repression of specific genes is accomplished via a plethora of transcriptional regulators. However, relatively little is known about how the activities of these proteins are controlled. Recent findings indicate that post-translational modifications fine-tune the function of transcription regulators by affecting their localization, conformation or stability. Here, we discuss these regulatory mechanisms in the context of the plant immune response. This system lends itself particularly well to studies of transcriptional regulators as activation of plant immunity is associated with rapid and dramatic reprogramming of the transcriptome. A case study of the plant immune coactivator NPR1 (nonexpressor of pathogenesis-related ( PR) genes 1) illustrates that transcription regulator activity may be controlled by redox-based modifications of cysteine thiols (e.g. disulphide bonding and S-nitrosylation), phosphorylation, and ubiquitinylation coupled to protein degradation. Importantly, cross-talk between distinct protein modifications may determine the spatial and temporal activity of transcription regulators that in turn profile the cellular transcriptome. [ABSTRACT FROM AUTHOR]
- Published
- 2010
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194. Ultraviolet radiation drives methane emissions from terrestrial plant pectins.
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McLeod, Andy R., Fry, Stephen C., Loake, Gary J., Messenger, David J., Reay, David S., Smith, Keith A., and Byung-Wook Yun
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METHANE , *PECTINS , *REACTIVE oxygen species , *TOBACCO , *ULTRAVIOLET radiation , *EMISSIONS (Air pollution) - Abstract
• Recent studies demonstrating an in situ formation of methane (CH4) within foliage and separate observations that soil-derived CH4 can be released from the stems of trees have continued the debate about the role of vegetation in CH4 emissions to the atmosphere. Here, a study of the role of ultraviolet (UV) radiation in the formation of CH4 and other trace gases from plant pectins in vitro and from leaves of tobacco ( Nicotiana tabacum) in planta is reported. • Plant pectins were investigated for CH4 production under UV irradiation before and after de-methylesterification and with and without the singlet oxygen scavenger 1,4-diazabicyclo[2.2.2]octane (DABCO). Leaves of tobacco were also investigated under UV irradiation and following leaf infiltration with the singlet oxygen generator rose bengal or the bacterial pathogen Pseudomonas syringae. • Results demonstrated production of CH4, ethane and ethylene from pectins and from tobacco leaves following all treatments, that methyl-ester groups of pectin are a source of CH4, and that reactive oxygen species (ROS) arising from environmental stresses have a potential role in mechanisms of CH4 formation. • Rates of CH4 production were lower than those previously reported for intact plants in sunlight but the results clearly show that foliage can emit CH4 under aerobic conditions. [ABSTRACT FROM AUTHOR]
- Published
- 2008
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195. Nitric oxide regulation of plant metabolism.
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Gupta, Kapuganti Jagadis, Kaladhar, Vemula Chandra, Fitzpatrick, Teresa B., Fernie, Alisdair R., Møller, Ian Max, and Loake, Gary J.
- Abstract
Nitric oxide (NO) has emerged as an important signal molecule in plants, having myriad roles in plant development. In addition, NO also orchestrates both biotic and abiotic stress responses, during which intensive cellular metabolic reprogramming occurs. Integral to these responses is the location of NO biosynthetic and scavenging pathways in diverse cellular compartments, enabling plants to effectively organize signal transduction pathways. NO regulates plant metabolism and, in turn, metabolic pathways reciprocally regulate NO accumulation and function. Thus, these diverse cellular processes are inextricably linked. This review addresses the numerous redox pathways, located in the various subcellular compartments that produce NO, in addition to the mechanisms underpinning NO scavenging. We focus on how this molecular dance is integrated into the metabolic state of the cell. Within this context, a reciprocal relationship between NO accumulation and metabolite production is often apparent. We also showcase cellular pathways, including those associated with nitrate reduction, that provide evidence for this integration of NO function and metabolism. Finally, we discuss the potential importance of the biochemical reactions governing NO levels in determining plant responses to a changing environment. Nitric oxide (NO) has emerged as an important signal molecule in plants, having myriad roles in plant biotic and abiotic stress responses, during which intensive cellular metabolic reprogramming occurs. Numerous redox pathways, located in the various subcellular compartments produce NO, in addition to the mechanisms that underpin NO scavenging. Here, we focus on how this molecular dance is integrated into the metabolic state of the cell.In addition, we discuss the potential importance of the biochemical reactions governing NO levels in determining plant responses to a changing environment. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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196. Perturbations in nitric oxide homeostasis promote Arabidopsis disease susceptibility towards Phytophthora parasitica.
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Cui, Beimi, Ma, Xiangren, Li, Yuan, Zhou, Yu, Ju, Xiuyun, Hussain, Adil, Umbreen, Saima, Yuan, Bo, Tabassum, Anika, Lubega, Jibril, Shan, Weixing, Loake, Gary J., and Pan, Qiaona
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PHYTOPHTHORA nicotianae , *DISEASE susceptibility , *HOMEOSTASIS , *REACTIVE oxygen species , *ARABIDOPSIS , *NITRIC oxide - Abstract
Phytophthora species can infect hundreds of different plants, including many important crops, causing a number of agriculturally relevant diseases. A key feature of attempted pathogen infection is the rapid production of the redox active molecule nitric oxide (NO). However, the potential role(s) of NO in plant resistance against Phytophthora is relatively unexplored. Here we show that the level of NO accumulation is crucial for basal resistance in Arabidopsis against Phytophthora parasitica. Counterintuitively, both relatively low or relatively high NO accumulation leads to reduced resistance against P. parasitica. S‐nitrosylation, the addition of a NO group to a protein cysteine thiol to form an S‐nitrosothiol, is an important route for NO bioactivity and this process is regulated predominantly by S‐nitrosoglutathione reductase 1 (GSNOR1). Loss‐of‐function mutations in GSNOR1 disable both salicylic acid accumulation and associated signalling, and also the production of reactive oxygen species, leading to susceptibility towards P. parasitica. Significantly, we also demonstrate that secreted proteins from P. parasitica can inhibit Arabidopsis GSNOR1 activity. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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197. Transcriptional regulation of taxol™ biosynthesis in Taxus cuspidate procambium cells
- Author
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Waibel, Thomas, Loake, Gary J., and Ingram, Gwyneth
- Subjects
616.994 ,taxol ,taxus ,454 ,solexa ,sequencing - Abstract
This thesis presents an investigation into the transcriptional regulation of TaxolTM biosynthsis in Taxus cuspidata cell suspension cultures. The potent anticancer drug TaxolTM has been shown to be successful in the treatment of breast, lung and ovarian cancer and the acquired immunodeficiency syndrome (AIDS) related Kaposi’s sarcoma. Produced by all species of yew, TaxolTM belongs to the class of taxane diterpenoids and is of huge pharmaceutical importance. The plant material utilised in this thesis is a cell suspension culture initiated from isolated procambium cells of T. cuspidata. The latter is a meristematic tissue giving rise to the conductive tissue of plants. This un-differentiated cell suspension culture exhibits an increased and stable production of TaxolTM in response to the plant hormone elicitor methyljasmonate, limited cell aggregation and fast growth when compared to a cell suspension culture initiated from differentiated cells (somatic) of T. cuspidata. In order to assess the stem cell characteristics of the employed procambium cell suspension culture, the transcriptome of T. cuspidata was sequenced utilising Roche/ 454 and Illumina/ Solexa NlaIII tag sequencing technoloxiv gies. Statistical analysis uncovered differential expression profiles of 563 genes present within the procambium cell derived transcriptome by comparison with the somatic cell derived transcriptome. Gene ontology analysis of the latter identified that genes associated with response to stress and defence response were upregulated in the differentially expressed portion within the procambium cell suspension culture. This is consistent with the characteristics of animal stem cells which exhibit robust defence strategies to environmental stress. Furthermore PHLOEM INTERCALATED WITH XYLEM (PXY ) and TRACHEARY ELEMENT DIFFERENTIATION 2 (TED2), which are essential for ordered procambium cell division and differentiation into trachaery elements respectively in A. thaliana and Z. elegans, are up-regulated in the T. cuspidata procambium cell suspension culture. Further T. cuspidata homologues of the jasmonate signalling components JASMONATE ZINC FINGER LIKE ZIM DOMAIN 2 (JAZ2) and JAZ3 were identified among up-regulated transcripts in response to jasmonate treatment in both the procambium and the somatic cell line. Blast analysis identified 211 transcription factors within the APETELA 2 (AP2), BASIC-HELIX-LOOPHELIX (bHLH), WRKY, MYB and BASIC-LEUCIN-ZIPPER (bZIP) families. Further characterisation established 21 transcription factors which are significantly up-regulated in response to jasmonate treatment and show a higher expression level in procambium cells. These provide promising targets for further functional characterisation to elucidate their involvement within TaxolTM biosynthesis. In order to investigate transcriptional regulation of the TaxolTM structural genes, a 513 bp fragment corresponding to the TAXADIENE SYNTHASE (TASY ) promoter was cloned by genome walking. In-silico analysis of the TASY and 3’-N-DEBENZOYLTAXOL N-BENZOYLTRANSFERASE (DBTNBT) promoter resulted in the identification of methyljasmonate and pathogen-responsive elements which may significantly contribute to jasmonate mediated accumulation of TaxolTM. Analysis of a chimeric promoter construct driving the reporter gene β-GLUCURONIDASE (GUS) in N. benthamiana confirmed jasmonate-responsiveness of the TASY promoter. Finally, comparison of the expression level of genes coding for potentially rate-limiting enzymes within the TaxolTM pathway established a significantly increased expression of BACCATIN II PHENYLPROPANOYLTRANSFERASE (BAPT) in response to jasmonate treatment within the procambium cell suspension culture. Furthermore transcripts of TASY, PHENYLALANINE AMINOMUTASE (PAM) and DBTNBT show an overall higher expression and prolonged transcript accumulation in procambium compared to somatic cells. In this thesis jasmonate-signalling components, jasmonate-responsive transcription factors and differential gene expression profiles of TaxolTM structural genes were identified which, may contribute to an increased TaxolTM production in the utilised procambium cell suspension culture. Furthermore the T. cuspidata procambium cell suspension culture was found to have an increased level of stress- and defence-response reflected by differential gene expression profiles and content of phenolic compounds and TaxolTM.
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- 2011
198. Ceratocystis fimbriata Employs a Unique Infection Strategy Targeting Peltate Glandular Trichomes of Sweetpotato (Ipomoea batatas) Plants.
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Yong Sun, Mengqiu Li, Yansu Wang, Lianwei Li, Meng Wang, Xintong Li, Mengke Xu, Loake, Gary J., Ming Guo, and Jihong Jiang
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- *
SWEET potatoes , *TRICHOMES , *PLANT cuttings , *DISEASE complications , *SYMPTOMS , *PHYTOPATHOGENIC microorganisms , *WILT diseases - Abstract
The infection processes of Ceratocystis fimbriata BMPZ13 (BMPZ13) was elucidated on vegetative tissues of sweetpotato plants employing light and scanning electron microscopy. Vegetative tissues infected with C. fimbriata BMPZ13 by either wounding or nonwounding inoculation methods developed typical disease symptoms, establishing black rot in stems and necrosis on buds, young leaves, and stems of sprouts, in addition to wilt on leaves and shoot cuttings, typical of vascular associated diseases. The runner hyphae of C. fimbriata BMPZ13 formed from germinated conidia were able to directly penetrate the epidermal cuticle for initial infection and invade sweetpotato peltate glandular trichomes, specialized secretory structures to store and secrete metabolites. A two-step biotrophic phase was observed with nonwounding inoculation on leaves and stems, featuring both intercellular and intracellular invasive hyphae, with the latter found within living cells of the leaf epidermis. Subsequent to the biotrophic phase was a necrotrophic phase displaying cell death in infected leaves and veins. Additionally, this cell death was an iron-associated ferroptosis, supporting the notion that iron is involved in the necrotrophic phase of C. fimbriata BMPZ13 infection. Significantly, we establish that C. fimbriata employs a unique infection strategy: the targeting of peltate glandular trichomes. Collectively, our findings show that C. fimbriata is a plant fungal pathogen with a hemibiotrophic infection style in sweetpotato vegetative tissues. [ABSTRACT FROM AUTHOR]
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- 2020
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199. Regulating the regulator: nitric oxide control of post‐translational modifications.
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Gupta, Kapuganti Jagadis, Kolbert, Zsuzsanna, Durner, Jorg, Lindermayr, Christian, Corpas, Francisco J., Brouquisse, Renaud, Barroso, Juan B., Umbreen, Saima, Palma, José M., Hancock, John T., Petrivalsky, Marek, Wendehenne, David, and Loake, Gary J.
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POST-translational modification , *NITRIC oxide , *REACTIVE oxygen species , *PLANT adaptation , *MOIETIES (Chemistry) , *CULTIVARS - Abstract
Summary: Nitric oxide (NO) is perfectly suited for the role of a redox signalling molecule. A key route for NO bioactivity occurs via protein S‐nitrosation, and involves the addition of a NO moiety to a protein cysteine (Cys) thiol (–SH) to form an S‐nitrosothiol (SNO). This process is thought to underpin a myriad of cellular processes in plants that are linked to development, environmental responses and immune function. Here we collate emerging evidence showing that NO bioactivity regulates a growing number of diverse post‐translational modifications including SUMOylation, phosphorylation, persulfidation and acetylation. We provide examples of how NO orchestrates these processes to mediate plant adaptation to a variety of cellular cues. [ABSTRACT FROM AUTHOR]
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- 2020
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200. Recommendations on terminology and experimental best practice associated with plant nitric oxide research.
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Gupta, Kapuganti Jagadis, Hancock, John T., Petrivalsky, Marek, Kolbert, Zsuzsanna, Lindermayr, Christian, Durner, Jorg, Barroso, Juan B., Palma, José M., Brouquisse, Renaud, Wendehenne, David, Corpas, Francisco J., and Loake, Gary J.
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NITRIC oxide , *BEST practices , *DISEASE resistance of plants , *NITRIC-oxide synthases , *TERMS & phrases , *PLANT capacity - Abstract
Summary: Nitric oxide (NO) emerged as a key signal molecule in plants. During the last two decades impressive progress has been made in plant NO research. This small, redox‐active molecule is now known to play an important role in plant immunity, stress responses, environmental interactions, plant growth and development. To more accurately and robustly establish the full spectrum of NO bioactivity in plants, it will be essential to apply methodological best practice. In addition, there are some instances of conflicting nomenclature within the field, which would benefit from standardization. In this context, we attempt to provide some helpful guidance for best practice associated with NO research and also suggestions for the cognate terminology. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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