151. Construction and analysis of the abnormal lncRNA–miRNA–mRNA network in hypoxic pulmonary hypertension
- Author
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Jie Liu, Zeqin Fan, Shuanglan Xu, Li Wei, Yishu Deng, Xiqian Xing, Jiao Yang, and Xiaoxian Huang
- Subjects
Male ,Leukocyte migration ,Bioinformatics ,Hypertension, Pulmonary ,mRNA ,Biophysics ,Biology ,Biochemistry ,hypoxic pulmonary hypertension ,Rats, Sprague-Dawley ,differently expressed genes ,long non-coding RNAs ,Immune system ,Databases, Genetic ,microRNA ,medicine ,Animals ,Gene Regulatory Networks ,competing endogenous RNA ,Protein Interaction Maps ,RNA, Messenger ,Hypoxia ,Molecular Biology ,Research Articles ,miRNA ,Messenger RNA ,Competing endogenous RNA ,Gene Expression Profiling ,Cell Biology ,Hypoxia (medical) ,Cell cycle ,Hedgehog signaling pathway ,Cell biology ,Disease Models, Animal ,Gene Expression Regulation ,Cell Cycle, Growth & Proliferation ,RNA ,RNA, Long Noncoding ,medicine.symptom ,Transcriptome ,Signal Transduction - Abstract
The incidence of hypoxic pulmonary hypertension (HPH) is increasing. Accumulating evidence suggests that long noncoding RNAs (lncRNAs) play an important role in HPH, but the functions and mechanism have yet to be fully elucidated. In the present study, we established a HPH rat model with 8 h of hypoxia exposure (10% O2) per day for 21 days. High-throughput sequencing identified 60 differentially expressed (DE) lncRNAs, 20 DE miRNAs and 695 DE mRNAs in rat lung tissue. qRT-PCR verified the accuracy of the results. The DE mRNAs were significantly enriched in immune response, inflammatory response, leukocyte migration, cell cycle, cellular response to interleukin-1, IL-17 signalling pathway, cytokine–cytokine receptor interaction and Toll-like receptor signalling pathway. According to the theory of competing endogenous RNA (ceRNA) networks, lncRNA–miRNA–mRNA network was constructed by Cytoscape software, 16 miRNAs and 144 mRNAs. The results suggested that seven DE lncRNAs (Ly6l, AABR07038849.2, AABR07069008.2, AABR07064873.1, AABR07001382.1, AABR07068161.1 and AABR07060341.2) may serve as molecular sponges of the corresponding miRNAs and play a major role in HPH.
- Published
- 2021