317 results on '"Jamal Z"'
Search Results
152. Designing of masks for quantum dot single electron transistor fabrication using E-beam nanolithography
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uda hashim, Jamal, Z. A. Z., and Sutikno
153. Fabrication and electrical characterization of Al/Ba xSr 1-xTiO 3/Pt/SiO 2/Si configuration for FeFET applications
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Saif, A. A., Jamal, Z. A. Z., Sauli, Z., and PRABAKARAN POOPALAN
154. Identification of the active-site serine in human lecithin: Cholesterol acyltransferase
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Farooqui, Jamal Z., primary, Wohl, Robert C., additional, Kézdy, Ferenc J., additional, and Scanu, Angelo M., additional
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- 1988
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155. Determination of pl values of variously methylated amino acids by isoelectric focusing
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Woon, Ki Paik, primary, Farooqui, Jamal Z., additional, Roy, Tamal, additional, and Kim, Sangduk, additional
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- 1983
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156. Multiport Circular Polarized RFID-Tag Antenna for UHF Sensor Applications
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Jamal Zaid, Abdulhadi Abdulhadi, Arun Kesavan, Yassin Belaizi, and Tayeb A. Denidni
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radio frequency identification (RFID) ,ultra-high frequency ,reading range ,sensor ,passive tag antenna ,multiport ,circular polarization ,Chemical technology ,TP1-1185 - Abstract
A circular polarized patch antenna for UHF RFID tag-based sensor applications is presented, with the circular polarization (CP) generated by a new antenna shape, an asymmetric stars shaped slotted microstrip patch antenna (CP-ASSSMP). Four stars etched on the patch allow the antenna’s size to be reduced by close to 20%. The proposed antenna is matched with two RFID chips via inductive-loop matching. The first chip is connected to a resistive sensor and acts as a sensor node, and the second is used as a reference node. The proposed antenna is used for two targets, serving as both reference and sensor simultaneously, thereby eliminating the need for a second antenna. Its reader can read the RFID chips at any orientation of the tag due to the CP. The measured reading range is about 25 m with mismatch polarization. The operating frequency band is 902–929 MHz for the two ports, which is covered by the US RFID band, and the axial-ratio bandwidth is about 7 MHz. In addition, the reader can also detect temperature, based on the minimum difference in the power required by the reference and sensor.
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- 2017
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157. Amiodarone and its Pulmonal Toxicity
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Kemalasari Nas Darisan, Jamal Zaini, and Yoga Yuniadi
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Amiodarone ,lung toxicity ,Drug toxicity ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 - Abstract
Amiodarone is an antiarrhythmic agent commonly used to treat supraventricular and ventricular arrhythmias. The drug prevents the recurrence of life-threatening ventricular arrhythmias and produces a modest reduction of sudden deaths in high-risk patients. This drug is an iodine-containing compound that tends to accumulate in several organs, including the lungs. It has been associated with a variety of adverse events. Of these events, the most serious is amiodarone pulmonary toxicity. Although the incidence of this complication has decreased with the use of lower doses of amiodarone, it can occur with any dose. Because amiodarone is widely used, all clinicians should be vigilant of this possibility. Pulmonary toxicity usually manifests as an acute or subacute pneumonitis, typically with diffuse infiltrates on chest x-ray and high-resolution computed tomography. Other, more localized, forms of pulmonary toxicity may occur, including pleural disease, migratory infiltrates, and single or multiple nodules. With early detection, the prognosis is good. Most patients diagnosed promptly respond well to the withdrawal of amiodarone and the administration of corticosteroids, which are usually given for four to 12 months. It is important that physicians be familiar with amiodarone treatment guidelines and follow published recommendations for the monitoring of pulmonary as well as extrapulmonary adverse effects.
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- 2014
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158. Anaplastic Variant of Classical Seminoma of the Testis: Northern Israel Oncology Center Experience and Brief Review of Literature
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Moshe E. Stein, Jamal Zidan, Tomer Charas, Karen Drumea, and Rahamim Ben-Yosef
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Anaplastic seminoma ,early stage ,good prognosis ,radiotherapy ,Medicine ,Medicine (General) ,R5-920 - Abstract
Objectives: There are only sporadic reports on the clinical behavior and appropriate treatment of anaplastic seminoma. This retrospective study summarizes our experience with the anaplastic variant of classical (typical) seminoma. Methods: Between 1986 and 2006, seven anaplastic seminoma patients were staged and treated at the Northern Israel Oncology Center. Staging procedures included meticulous physical and neurological examinations, complete blood count, full biochemistry profile, specific tumor markers, testicular ultrasound, and other radiological measures. All patients underwent inguinal orchiectomy and were staged properly. Six patients had stage I disease, and one patient had stage IIA disease. Patients were irradiated with doses ranging from 2,500 to 3,000 cGy, and the stage IIA patient received an additional 1,000 cGy boost to radiographically involved lymph nodes. Results: After a mean follow-up of 11 years, six patients are alive with no evidence of disease. One patient died due to an unknown, non-oncological, cause, unrelated to his previous testicular tumor, while in complete remission. Conclusions: Despite the low patient numbers and the retrospective nature of our study, it can be concluded that radiotherapy treatment for early-stage anaplastic seminoma patients might achieve the same excellent survival as for classical seminoma. However, the general consensus achieved through large-scale studies suggests that active surveillance should be offered to all stage I seminoma patients, regardless of the pathologic variant.
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- 2014
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159. Near-infrared imaging of adoptive immune cell therapy in breast cancer model using cell membrane labeling.
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Fatma M Youniss, Gobalakrishnan Sundaresan, Laura J Graham, Li Wang, Collin R Berry, Gajanan K Dewkar, Purnima Jose, Harry D Bear, and Jamal Zweit
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Medicine ,Science - Abstract
The overall objective of this study is to non-invasively image and assess tumor targeting and retention of directly labeled T-lymphocytes following their adoptive transfer in mice. T-lymphocytes obtained from draining lymph nodes of 4T1 (murine breast cancer cell) sensitized BALB/C mice were activated in-vitro with Bryostatin/Ionomycin for 18 hours, and were grown in the presence of Interleukin-2 for 6 days. T-lymphocytes were then directly labeled with 1,1-dioctadecyltetramethyl indotricarbocyanine Iodide (DiR), a lipophilic near infrared fluorescent dye that labels the cell membrane. Assays for viability, proliferation, and function of labeled T-lymphocytes showed that they were unaffected by DiR labeling. The DiR labeled cells were injected via tail vein in mice bearing 4T1 tumors in the flank. In some cases labeled 4T1 specific T-lymphocytes were injected a week before 4T1 tumor cell implantation. Multi-spectral in vivo fluorescence imaging was done to subtract the autofluorescence and isolate the near infrared signal carried by the T-lymphocytes. In recipient mice with established 4T1 tumors, labeled 4T1 specific T-lymphocytes showed marked tumor retention, which peaked 6 days post infusion and persisted at the tumor site for up to 3 weeks. When 4T1 tumor cells were implanted 1-week post-infusion of labeled T-lymphocytes, T-lymphocytes responded to the immunologic challenge and accumulated at the site of 4T1 cell implantation within two hours and the signal persisted for 2 more weeks. Tumor accumulation of labeled 4T1 specific T-lymphocytes was absent in mice bearing Meth A sarcoma tumors. When lysate of 4T1 specific labeled T-lymphocytes was injected into 4T1 tumor bearing mice the near infrared signal was not detected at the tumor site. In conclusion, our validated results confirm that the near infrared signal detected at the tumor site represents the DiR labeled 4T1 specific viable T-lymphocytes and their response to immunologic challenge can be imaged in vivo.
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- 2014
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160. High Strain Rate and Plastic Deformation Response of OFHC Copper by Finite Element Method
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Ehsan Etemadi, Jamal Zamani Ashani, and Mohammad Vahhab Mousavi
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Mechanical engineering and machinery ,TJ1-1570 - Published
- 2014
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161. A comparative study of the characteristics of GaN films grown by MOCVD
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Yam, F.K., primary, Hassan, Z., additional, Jamal, Z., additional, Aziz, A.A., additional, and Kordesch, M.E., additional
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162. Comparison between a Ti cap cobalt silicide to a flashed Ti-Ti cap cobalt silicide
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Lim, C.O., primary, Jamal, Z., additional, Aziz, A.A., additional, and Hassan, Z., additional
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163. Chemotherapy for small cell lung cancer: a comprehensive review
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Syed Mustafa Karim and Jamal Zekri
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small cell lung cancer ,SCLC ,chemotherapy ,cisplatin ,carboplatin ,etoposide ,Other systems of medicine ,RZ201-999 ,Internal medicine ,RC31-1245 - Abstract
Combination chemotherapy is the current strategy of choice for treatment of small cell lung cancer (SCLC). Platinum containing combination regimens are superior to non-platinum regimens in limited stage- SCLC and possibly also in extensive stage-SCLC as first and second-line treatments. The addition of ifosfamide to platinum containing regimens may improve the outcome but at the price of increased toxicity. Suboptimal doses of chemotherapy result in inferior survival. Early intensified, accelerated and high-dose chemotherapy gave conflicting results and is not considered a standard option outside of clinical trials. A number of newer agents have provided promising results when used in combination regimens, for example, gemcitabine, irinotecan and topotecan. However, more studies are required to appropriately evaluate them. There is a definitive role for radiotherapy in LD-SCLC. However, timing and schedule are subject to further research. Novel approaches are currently being investigated in the hope of improving outcome.
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- 2012
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164. Myocardial Infarction in a Young Female with Palindromic Rheumatism: A Consequence of Negative Remodeling
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Timothy R. Larsen, Sachin Kumar Amruthlal Jain, Jamal Zarghami, and Shukri David
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Medicine - Abstract
Palindromic rheumatism is a rare disease associated with systemic inflammation. Negative or constrictive coronary artery remodeling is typically not seen until the 7th or 8th decade of life. We report a case of a young female with palindromic rheumatism who suffered a non-ST segment elevation myocardial infarction secondary to a flow-limiting lesion that demonstrated negative remodeling by intravascular ultrasound (IVUS).
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- 2012
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165. 192 (PB-099) Poster - Factors influencing surgical approach in breast cancer patients post neoadjuvant systemic therapy at the Latvian Oncology center.
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Garascenko, V., Meistere, E., Al Jamal, Z., Hegmane, A., Eglitis, J., and Arcimovica, K.
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BREAST tumors , *CANCER patients , *ONCOLOGY , *CONFERENCES & conventions , *COMBINED modality therapy , *HOSPITAL wards - Published
- 2024
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166. Manufacturing Method of Carbon/Phenolic Composites and its Implication on Ablative Charactristics
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Jamal Zamani and Vahid Moosabeiki
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carbon/phenolic composite ,thermal ablation ,autoclave ,acid curing ,plasma torch ,Polymers and polymer manufacture ,TP1080-1185 - Abstract
Carbon/phenolic composites are used in the nozzle parts of solid rocket motors due to their heat-resisting, ablation, and high strength characteristics, which are required to endure the high temperature and pressure of combustion gas passing through the nozzle. One of the most important factors on erosion rate is the void content of the ablative composites. Facilities should be designed to simplify the exhaust of volatile components, in order to reduce the void content in the manufactured samples. Accordingly, to reduce the void percentage of carbon/phenolic composites in this study, samples were manufactured by the vacuum bag molding technique and cured in an autoclave. In order to compare the effect of manufacturing process on the ablation characteristics of carbon/phenolic composites, another batch of samples was produced by the acid curing method. The specimens were exposed to plasma torch flame based on ASTM E285-80. The results showed that the void percentage of samples which was manufactured by the autoclave process was 60% lower than the acid-cured samples, and this led to reduce the linear erosion rate of these composites.
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- 2013
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167. Disordering of a Short Period GaAs-AlGaAs Superlattice by C Diffusion.
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Jamal, Z. and Goodhew, P. J.
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- 1992
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168. Novel equivalent function for deadzone nonlinearity: applied to analytical solution of beam vibration using He's Parameter Expanding Method
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Hamid M. Sedighi, Kourosh H. Shirazi, and Jamal Zare
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Deadzone nonlinearity ,Equivalent function ,He's Parameter Expanding Method ,cantilever beam ,Mechanics of engineering. Applied mechanics ,TA349-359 ,Descriptive and experimental mechanics ,QC120-168.85 - Abstract
This study intends to introduce the novel and efficient exact equivalent function (EF) for well-known deadzone nonlinearity. To indicate the effectiveness of this EF, the nonlinear vibration of cantilever beam in presence of deadzone nonlinear boundary condition is studied. The powerful analytical method, called He's Parameter Expanding Method (HPEM) is used to obtain the exact solution of dynamic behavior of mentioned system. It is shown that one term in series expansions is sufficient to obtain a highly accurate solution. Comparison of the obtained solutions using numerical method shows the soundness of this analytical EF.
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169. Determination of p l values of variously methylated amino acids by isoelectric focusing
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Woon, Ki Paik, Farooqui, Jamal Z., Roy, Tamal, and Kim, Sangduk
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- 1983
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170. SYNTHESIS, MICROSTRUCTURE AND HARDNESS OF FUNCTIONALLY GRADED HYDROXYAPATITE/Co-Cr-Mo (F75) PREPARED USING POWDER METALLURGY.
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AB LLAH, N., JAMALUDIN, S. B., AHMAD ZAIDI, N. H., and ZAHID JAMAL, Z. A.
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MICROSTRUCTURE , *BLOOD circulation , *BONES , *HYDROXYAPATITE , *MOLYBDENUM - Abstract
Human bone consists of graded structure which is more compact in the outer layer and porous inside the bone. This structure ensures blood circulation occur inside the bone and also sustains high impact load throughout the bone activity. In this research, functionally graded of hydroxyapatite (HAP) and Co-Cr-Mo (F75) was synthesised using powder metallurgy to imitate the natural bone. Three layers of graded structures were synthesised based on first layer was the 100wt% HAP, intermediate layer was the mixture of HAP and F75, finally third layer was the 100wt% F75. The effect of composition in the intermediate layer was studied by varying the weight percentage of HAP and F75 in the intermediate layer. Microstructure and hardness behaviour were investigated. The finding showed that pores and microcrack present as the content of HAP increased in the intermediate layer. Energy Dispersive Spectroscopy (EDS) analysis showed that the diffusion of calcium, cobalt, chromium and molybdenum occurred during sintering process. Hardness value indented on the intermediate layer increased as the percentage of HAP increased. [ABSTRACT FROM AUTHOR]
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- 2015
171. Potassium Supplementation and Prevention of Atrial Fibrillation After Cardiac Surgery: The TIGHT K Randomized Clinical Trial.
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O'Brien B, Campbell NG, Allen E, Jamal Z, Sturgess J, Sanders J, Opondo C, Roberts N, Aron J, Maccaroni MR, Gould R, Kirmani BH, Gibbison B, Kunst G, Zarbock A, Kleine-Brüggeney M, Stoppe C, Pearce K, Hughes M, Van Dyck L, Evans R, Montgomery HE, and Elbourne D
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- Aged, Female, Humans, Male, Middle Aged, Dietary Supplements, United Kingdom epidemiology, Germany epidemiology, Prospective Studies, Incidence, Intention to Treat Analysis, Atrial Fibrillation blood, Atrial Fibrillation epidemiology, Atrial Fibrillation etiology, Atrial Fibrillation prevention & control, Coronary Artery Bypass adverse effects, Postoperative Complications blood, Postoperative Complications epidemiology, Postoperative Complications etiology, Postoperative Complications prevention & control, Potassium administration & dosage, Potassium blood
- Abstract
Importance: Supplementing potassium in an effort to maintain high-normal serum concentrations is a widespread strategy used to prevent atrial fibrillation after cardiac surgery (AFACS), but is not evidence-based, carries risks, and is costly., Objective: To determine whether a lower serum potassium concentration trigger for supplementation is noninferior to a high-normal trigger., Design, Setting, and Participants: This open-label, noninferiority, randomized clinical trial was conducted at 23 cardiac surgical centers in the United Kingdom and Germany. Between October 20, 2020, and November 16, 2023, patients with no history of atrial dysrhythmias scheduled for isolated coronary artery bypass grafting (CABG) surgery were enrolled. The last study patient was discharged from the hospital on December 11, 2023., Interventions: Patients were randomly assigned to a strategy of tight or relaxed potassium control (only supplementing if serum potassium concentration fell below 4.5 mEq/L or 3.6 mEq/L, respectively). Patients wore an ambulatory heart rhythm monitor, which was analyzed by a core laboratory masked to treatment assignment., Main Outcomes and Measures: The prespecified primary end point was clinically detected and electrocardiographically confirmed new-onset AFACS in the first 120 hours after CABG surgery or until hospital discharge, whichever occurred first. All primary outcome events were validated by an event validation committee, which was masked to treatment assignment. Noninferiority of relaxed potassium control was defined as a risk difference for new-onset AFACS with associated upper bound of a 1-sided 97.5% CI of less than 10%. Secondary outcomes included other heart rhythm-related events, clinical outcomes, and cost related to the intervention., Results: A total of 1690 patients (mean age, 65 years; 256 [15%] females) were randomized. The primary end point occurred in 26.2% of patients (n = 219) in the tight group and 27.8% of patients (n = 231) in the relaxed group, which is a risk difference of 1.7% (95% CI, -2.6% to 5.9%). There was no difference between the groups in the incidence of at least 1 AFACS episode detected by any means or by ambulatory heart rhythm monitor alone, non-AFACS dysrhythmias, in-patient mortality, or length of stay. Per-patient cost for purchasing and administering potassium was significantly lower in the relaxed group (mean difference, $111.89 [95% CI, $103.60-$120.19]; P <.001)., Conclusions and Relevance: For AFACS prophylaxis, supplementation only when serum potassium concentration fell below 3.6 mEq/L was noninferior to the current widespread practice of supplementing potassium to maintain a serum potassium concentration greater than or equal to 4.5 mEq/L. The lower threshold of supplementation was not associated with any increase in dysrhythmias or adverse clinical outcomes., Trial Registration: ClinicalTrials.gov Identifier: NCT04053816.
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- 2024
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172. Optimization of fluorinated phenyl azides as universal photocrosslinkers for semiconducting polymers.
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Tan ZS, Jamal Z, Teo DWY, Ko HC, Seah ZL, Phua HY, Ho PKH, Png RQ, and Chua LL
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Fluorinated phenyl azides (FPA) enable photo-structuring of π-conjugated polymer films for electronic device applications. Despite their potential, FPAs have faced limitations regarding their crosslinking efficiency, and more importantly, their impact on critical semiconductor properties, such as charge-carrier mobility. Here, we report that azide photolysis and photocrosslinking can achieve unity quantum efficiencies for specific FPAs. This suggests preferential nitrene insertion into unactivated C‒H bonds over benzazirine and ketenimine reactions, which we attribute to rapid interconversion between the initially formed hot states. Furthermore, we establish a structure‒activity relationship for carrier mobility quenching. The binding affinity of FPA crosslinker to polymer π-stacks governs its propensity for mobility quenching in both PM6 and PBDB-T used as model conjugated polymers. This binding affinity can be suppressed by FPA ring substitution, but varies in a non-trivial way with π-stack order. Utilizing the optimal FPA, photocrosslinking enables the fabrication of morphology-stabilized, acceptor-infiltrated donor polymer networks (that is, PBDB-T: ITIC and PM6: Y6) for solar cells. Our findings demonstrate the exceptional potential of the FPA photochemistry and offer a promising approach to address the challenges of modelling realistic molecular interactions in complex polymer morphologies, moving beyond the limitations of Flory‒Huggins mean field theory., (© 2024. The Author(s).)
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- 2024
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173. Reconsidering Routine Histopathological Examination of Gallbladder Specimens in Cholecystectomy: Optimizing Clinical Practice and Resource Management.
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Jamal Z, Yu Z, Zafar N, and Li D
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Introduction Cholecystectomy, the surgical removal of the gallbladder, is a common procedure worldwide. Despite no visible anomalies, routine histopathological examination (HPE) of gallbladder specimens post-surgery is standard practice to exclude pathologies, notably gallbladder cancer (GBC). Incidence rates of GBC vary geographically and ethnically. Surgical intervention is recommended for advanced GBC stages, while early stages may require cholecystectomy alone. Although rare, GBC and bile duct cancers pose increased risks in certain demographics, such as women and individuals over 65. Routine HPE practices vary globally based on resource availability and GBC incidence. This study assesses the necessity of routine HPE by evaluating the selective processing of gallbladder specimens suspected of GBC, prioritizing patient safety. Materials and methods This retrospective cohort study conducted at Redland Hospital, a district general hospital in Australia, investigated the necessity of routine HPE for excised gallbladder specimens. Adhering to routine HPE policy, the study encompassed all elective and emergency cholecystectomies performed from January 2023 to December 2023, excluding pediatric cases, concurrent surgical procedures, and those with suspected malignancy. Demographic data, surgery indications, intraoperative findings, histopathological results, and incidental gallbladder cancer (IGC) outcomes were analyzed. Pathology reports and case documentation were reviewed for cancerous pathology indicators. Results Over the one-year study period from January 2023 to December 2023, a total of 266 gallbladder specimens were subjected to HPE post-cholecystectomy. Of these, 201 were female and 65 were male, yielding a male-to-female ratio of 3:1. Elective cholecystectomy was performed on 56.4% (150) of patients, while 43.6% (116) underwent emergency procedures. Laparoscopic cholecystectomy (LC) was the primary surgical approach, except for one case requiring conversion to an open procedure. None of the patients exhibited GBC; however, 3.3% (9) displayed premalignant histopathological features in their specimens. Conclusion In conclusion, adopting a selective approach, where only gallbladder specimens with macroscopic abnormalities undergo HPE, seems prudent, especially in regions with low GBC incidence. Our study, which revealed no cases of GBC, supports this approach. It not only reduces the risk of missing incidental carcinoma in clinically unsuspected cases but also proves cost-effective and reduces the histopathology department workload without compromising patient outcomes. Therefore, we advocate for routine macroscopic examination of gallbladder specimens for abnormalities before HPE submission, particularly in cholecystectomy patients with gallstone disease., Competing Interests: Human subjects: Consent was obtained or waived by all participants in this study. Animal subjects: All authors have confirmed that this study did not involve animal subjects or tissue. Conflicts of interest: In compliance with the ICMJE uniform disclosure form, all authors declare the following: Payment/services info: All authors have declared that no financial support was received from any organization for the submitted work. Financial relationships: All authors have declared that they have no financial relationships at present or within the previous three years with any organizations that might have an interest in the submitted work. Other relationships: All authors have declared that there are no other relationships or activities that could appear to have influenced the submitted work., (Copyright © 2024, Jamal et al.)
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- 2024
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174. Serotype and genomic diversity of dengue virus during the 2023 outbreak in Pakistan reveals the circulation of genotype III of DENV-1 and cosmopolitan genotype of DENV-2.
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Jamal Z, Haider SA, Hakim R, Humayun F, Farooq MU, Ammar M, Afrough B, Inamdar L, Salman M, and Umair M
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- Humans, Pakistan epidemiology, Male, Adult, Female, Young Adult, Middle Aged, Adolescent, Child, Child, Preschool, Aged, Infant, Serotyping, RNA, Viral genetics, Dengue Virus genetics, Dengue Virus classification, Dengue Virus isolation & purification, Dengue epidemiology, Dengue virology, Disease Outbreaks, Genotype, Serogroup, Genetic Variation, Phylogeny, Genome, Viral genetics, Whole Genome Sequencing
- Abstract
Dengue, a mosquito-borne viral disease, poses a significant public health challenge in Pakistan, with a significant outbreak in 2023, prompting our investigation into the serotype and genomic diversity of the dengue virus (DENV). NS-1 positive blood samples from 153 patients were referred to the National Institute of Health, Pakistan, between July and October 2023. Among these, 98 (64.1%) tested positive using multiplex real-time PCR, with higher prevalence among males (65.8%) and individuals aged 31-40. Serotyping revealed DENV-1 as the predominant serotype (84.7%), followed by DENV-2 (15.3%). Whole-genome sequencing of 18 samples (DENV-1 = 17, DENV-2 = 01) showed that DENV-1 (genotype III) samples were closely related (>99%) to Pakistan outbreak samples (2022), and approx. > 98% with USA (2022), Singapore and China (2016), Bangladesh (2017), and Pakistan (2019). The DENV-2 sequence (cosmopolitan genotype; clade IVA) shared genetic similarity with Pakistan outbreak sequences (2022), approx. > 99% with China and Singapore (2018-2019) and showed divergence from Pakistan sequences (2008-2013). No coinfection with dengue serotypes or other viruses were observed. Comparisons with previous DENV-1 sequences highlighted genetic variations affecting viral replication efficiency (NS2B:K55R) and infectivity (E:M272T). These findings contribute to dengue epidemiology understanding and underscore the importance of ongoing genomic surveillance for future outbreak responses in Pakistan., (© 2024 Wiley Periodicals LLC.)
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- 2024
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175. Correction: Impact of maintaining serum potassium concentration ≥ 3.6mEq/L versus ≥ 4.5mEq/L for 120 hours after isolated coronary artery bypass graft surgery on incidence of new onset atrial fibrillation: Protocol for a randomized non-inferiority trial.
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Campbell NG, Allen E, Evans R, Jamal Z, Opondo C, Sanders J, Sturgess J, Montgomery HE, Elbourne D, and O'Brien B
- Abstract
[This corrects the article DOI: 10.1371/journal.pone.0296525.]., (Copyright: © 2024 Campbell et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
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- 2024
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176. Genomic characterization of human respiratory syncytial virus circulating in Islamabad, Pakistan, during an outbreak in 2022-2023.
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Haider SA, Jamal Z, Tahir F, Salman M, and Umair M
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- Pakistan epidemiology, Humans, Mutation, Whole Genome Sequencing, Genomics, Female, Infant, Male, Viral Fusion Proteins genetics, Child, Preschool, Respiratory Syncytial Virus Infections epidemiology, Respiratory Syncytial Virus Infections virology, Respiratory Syncytial Virus, Human genetics, Respiratory Syncytial Virus, Human classification, Respiratory Syncytial Virus, Human isolation & purification, Disease Outbreaks, Phylogeny, Genome, Viral genetics, Genotype
- Abstract
In this study, conducted at the National Institute of Health, Islamabad, during an outbreak of human respiratory syncytial virus (hRSV) from December 2022 to January 2023, the first whole-genome sequences of hRSV isolates from Islamabad, Pakistan, were determined. Out of 10 positive samples, five were sequenced, revealing the presence of two genotypes: RSV-A (GA2.3.5, ON1 strain) and RSV-B (GB5.0.5.a, BA-10 strain). A rare non-synonymous substitution (E232G) in G the protein and N276S in the F protein were found in RSV-A. In RSV-B, the unique mutations K191R, Q209R, and I206M were found in the F protein. These mutations could potentially influence vaccine efficacy and viral pathogenicity. This research underscores the importance of genomic surveillance for understanding RSV diversity and guiding public health responses in Pakistan., (© 2024. The Author(s), under exclusive licence to Springer-Verlag GmbH Austria, part of Springer Nature.)
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- 2024
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177. Impact of maintaining serum potassium concentration ≥ 3.6mEq/L versus ≥ 4.5mEq/L for 120 hours after isolated coronary artery bypass graft surgery on incidence of new onset atrial fibrillation: Protocol for a randomized non-inferiority trial.
- Author
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Campbell NG, Allen E, Evans R, Jamal Z, Opondo C, Sanders J, Sturgess J, Montgomery HE, Elbourne D, and O'Brien B
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- Humans, Coronary Artery Bypass adverse effects, Coronary Artery Bypass methods, Germany, Incidence, Randomized Controlled Trials as Topic, Equivalence Trials as Topic, Atrial Fibrillation epidemiology, Atrial Fibrillation etiology, Atrial Fibrillation prevention & control, Potassium
- Abstract
Background: Atrial Fibrillation After Cardiac Surgery (AFACS) occurs in about one in three patients following Coronary Artery Bypass Grafting (CABG). It is associated with increased short- and long-term morbidity, mortality and costs. To reduce AFACS incidence, efforts are often made to maintain serum potassium in the high-normal range (≥ 4.5mEq/L). However, there is no evidence that this strategy is efficacious. Furthermore, the approach is costly, often unpleasant for patients, and risks causing harm. We describe the protocol of a planned randomized non-inferiority trial to investigate the impact of intervening to maintain serum potassium ≥ 3.6 mEq/L vs ≥ 4.5 mEq/L on incidence of new-onset AFACS after isolated elective CABG., Methods: Patients undergoing isolated CABG at sites in the UK and Germany will be recruited, randomized 1:1 and stratified by site to protocols maintaining serum potassium at either ≥ 3.6 mEq/L or ≥ 4.5 mEq/L. Participants will not be blind to treatment allocation. The primary endpoint is AFACS, defined as an episode of atrial fibrillation, flutter or tachycardia lasting ≥ 30 seconds until hour 120 after surgery, which is both clinically detected and electrocardiographically confirmed. Assuming a 35% incidence of AFACS in the 'tight control group', and allowing for a 10% loss to follow-up, 1684 participants are required to provide 90% certainty that the upper limit of a one-sided 97.5% confidence interval (CI) will exclude a > 10% difference in favour of tight potassium control. Secondary endpoints include mortality, use of hospital resources and incidence of dysrhythmias not meeting the primary endpoint (detected using continuous heart rhythm monitoring)., Discussion: The Tight K Trial will assess whether a protocol to maintain serum potassium ≥ 3.6 mEq/L is non inferior to maintaining serum potassium ≥ 4.5 mEq/L in preventing new-onset AFACS after isolated CABG., Trial Registration: ClinicalTrials.gov Identifier: NCT04053816. Registered on 13 August 2019. Last update 7 January 2021., Competing Interests: The authors have declared that no competing interests exist., (Copyright: © 2024 Campbell et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
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- 2024
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178. Outcomes of Percutaneous Image-Guided and Laparoscopic Cholecystostomies in High-Risk Patients With Acute Calculus Cholecystitis: A Five-Year District General Hospital Experience.
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Aly MS, Jamal Z, Khawaja Z, Kieu PL, Zafar N, Kanakalingam D, and Khalil A
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Introduction Acute cholecystitis (AC), inflammation of the gall bladder, is one of the most common emergency surgical presentations. In the UK, approximately 15% of the population is estimated to have gallstones, and approximately 20% of them can develop AC. Laparoscopic cholecystectomy (LC) is considered the definitive management of AC. However, cholecystectomy carries a very high risk of morbidity and mortality in high-risk frail patients with multiple comorbidities who are deemed unfit for surgery. Percutaneous cholecystostomy (PC), both image-guided and laparoscopic, is generally acknowledged as an interim treatment measure before definitive management, which is the LC. Materials and methods This is a retrospective study from the Royal Albert Edward Infirmary, a district general hospital (DGH) based in Wigan, UK. The medical records of all the patients who were admitted to the surgical department and underwent PC between January 2017 and December 2022 were analyzed. Patients with previous hepato-pancreato-biliary (HPB) malignancy, who underwent open cholecystostomy, or those with abdominal ascites were excluded from the study. Information was collected regarding the age, gender, American Society of Anaesthesiologists (ASA) grades, success rates of both procedures as temporary or definitive management, duration of hospital stay, 30-day and 1-year mortality after the procedure, timing of the procedure, and long-term complications after the procedure, particularly those related to cholecystostomy tube dislodgment or blockage. Results Twenty-seven patients who underwent PC were divided into two groups: group A, consisting of 10 patients who underwent laparoscopic cholecystostomies, and group B, consisting of 17 patients who had ultrasound (US)-guided cholecystostomies. The mean age of the patients in group A was 66.7 as compared to 75.1 in group B. Most of the patients were in ASA groups III (14) and IV (10). About 74% of patients had procedures done during the day and 26% had PC at night time. The mean hospital stay was 13.5 days. About 55% of patients had planned elective LC as a definitive management. Following the treatment, two patients died within 30 days, and eight patients passed away within a year. About 40% of the patients had complications related to the tube dislodgment and blockage. Conclusion This study concludes that PC, using both laparoscopic and US-guided techniques, can serve as an interim as well as a definitive measure, particularly in patients who are at high risk for anesthesia and the procedure itself and have multiple comorbidities., Competing Interests: The authors have declared that no competing interests exist., (Copyright © 2024, Aly et al.)
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- 2024
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179. Spontaneous Perforation of Meckel's Diverticulum in a Young Adult Male: A Case Report and Review of the Literature.
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Aly MS and Jamal Z
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Meckel's diverticulum, a congenital defect that affects about 2% of the population, is a remnant of the embryologic vitelline duct. Perforated Meckel's diverticulum, a rare consequence of an already rare disease process, frequently presents and is diagnosed as a perforated appendix. We report a case of a 28-year-old male who presented with a two-day history of right-sided lower abdominal pain associated with nausea. The abdominal examination revealed a soft, nondistended abdomen with tenderness in the right iliac fossa. A CT scan of the abdomen showed a normal appendix and inflammation of Meckel's diverticulum without any signs of perforation. Bowel exploration through a small midline incision indicated the presence of a highly inflamed Meckel's diverticulum with localized perforation 75 cm from the ileocecal valve. A resection of 15 cm of the small bowel and an end-to-end primary anastomosis were performed. The patient had an uncomplicated recovery and was discharged after a five-day admission to a surgical ward. This case report illustrates the significance of keeping Meckel's diverticulum as a differential diagnosis in all the patients who present with an acute abdomen., Competing Interests: The authors have declared that no competing interests exist., (Copyright © 2024, Aly et al.)
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- 2024
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180. Age-dependent genes in adipose stem and precursor cells affect regulation of fat cell differentiation and link aging to obesity via cellular and genetic interactions.
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Kar A, Alvarez M, Garske KM, Huang H, Lee SHT, Deal M, Das SS, Koka A, Jamal Z, Mohlke KL, Laakso M, Heinonen S, Pietiläinen KH, and Pajukanta P
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- Humans, Cell Differentiation genetics, Adipocytes metabolism, Aging genetics, Transcription Factors metabolism, Obesity genetics, Obesity metabolism, Adipose Tissue metabolism
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Background: Age and obesity are dominant risk factors for several common cardiometabolic disorders, and both are known to impair adipose tissue function. However, the underlying cellular and genetic factors linking aging and obesity on adipose tissue function have remained elusive. Adipose stem and precursor cells (ASPCs) are an understudied, yet crucial adipose cell type due to their deterministic adipocyte differentiation potential, which impacts the capacity to store fat in a metabolically healthy manner., Methods: We integrated subcutaneous adipose tissue (SAT) bulk (n=435) and large single-nucleus RNA sequencing (n=105) data with the UK Biobank (UKB) (n=391,701) data to study age-obesity interactions originating from ASPCs by performing cell-type decomposition, differential expression testing, cell-cell communication analyses, and construction of polygenic risk scores for body mass index (BMI)., Results: We found that the SAT ASPC proportions significantly decrease with age in an obesity-dependent way consistently in two independent cohorts, both showing that the age dependency of ASPC proportions is abolished by obesity. We further identified 76 genes (72 SAT ASPC marker genes and 4 transcription factors regulating ASPC marker genes) that are differentially expressed by age in SAT and functionally enriched for developmental processes and adipocyte differentiation (i.e., adipogenesis). The 76 age-perturbed ASPC genes include multiple negative regulators of adipogenesis, such as RORA, SMAD3, TWIST2, and ZNF521, form tight clusters of longitudinally co-expressed genes during human adipogenesis, and show age-based differences in cellular interactions between ASPCs and adipose cell types. Finally, our genetic data demonstrate that cis-regional variants of these genes interact with age as predictors of BMI in an obesity-dependent way in the large UKB, while no such gene-age interaction on BMI is observed with non-age-dependent ASPC marker genes, thus independently confirming our cellular ASPC results at the biobank level., Conclusions: Overall, we discover that obesity prematurely induces a decrease in ASPC proportions and identify 76 developmentally important ASPC genes that implicate altered negative regulation of fat cell differentiation as a mechanism for aging and directly link aging to obesity via significant cellular and genetic interactions., (© 2024. The Author(s).)
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- 2024
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181. A Good Medical Practice of the Patients' Right to Information: An Audit Cycle of Patient Understanding and Satisfaction With Information Provided to Patients With Acute Pancreatitis.
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Jamal Z, Khawaja Z, Zafar N, Haider MI, Adnan N, Siddiqui A, and Alam I
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Introduction Acute pancreatitis (AP), characterized by the inflammation of the pancreas, is a common acute surgical condition accounting for approximately 3% of all surgical admissions with abdominal pain and has an incidence of approximately 56 cases per 100,000 population every year. The General Medical Council (GMC), National Institute for Health and Care Excellence (NICE), and Royal College of Nursing best practice guidelines recommend that such patients and their family members should be provided with both verbal and written information about acute pancreatitis and its management in a way that they can understand. The aim of this audit cycle was to find out the compliance with information provided to patients with acute pancreatitis as per the GMC good medical practice and NICE guidelines and assess their satisfaction. Method A closed-loop audit consisting of two cycles was carried out. Thirty patients who were admitted to the department of general surgery with acute pancreatitis were provided with a questionnaire containing 11 questions asking about the information provided to them about their condition by healthcare professionals; then, interventions were carried out in the form of developing patient information leaflets (PILs) and encouraging healthcare professionals to distribute them and provide information to the patients and their family members. Results Overall, improvements were seen in all aspects of the information being provided to patients, and particularly, more than 100% improvement was seen in patient satisfaction related to the information provided to them in the second cycle after the implementation of interventions. Conclusions This study concludes that patients should be given all the information they require in accordance with their right to information, in line with GMC best practice, NICE, and Royal College of Nursing best practice guidelines. A very effective way to improve the health outcomes and satisfaction of patients is to give them access to a patient information leaflet, which can allow patients to consider their options and understand what can happen during treatment, especially when doctors have limited time to carry out detailed discussions with the patient., Competing Interests: The authors have declared that no competing interests exist., (Copyright © 2023, Jamal et al.)
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- 2023
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182. Antibody designing against IIIabc junction (JIIIabc) of HCV IRES through affinity maturation; RNA-Antibody docking and interaction analysis.
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Ejaz S, Paracha RZ, Ejaz S, and Jamal Z
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- Humans, Hepacivirus genetics, Internal Ribosome Entry Sites, Antibodies, 5' Untranslated Regions, Carcinoma, Hepatocellular, Liver Neoplasms, Hepatitis C
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Hepatitis C virus is a single-stranded RNA based virus which can cause chronic HCV and hepatocellular carcinoma. HCV genotype 3a has relatively higher rate of fibrosis progression, prevalence of steatosis and incidence of HCC. Despite HCVs variation in genomic sequence, the 5' untranslated region containing internal ribosome entry site (IRES) is highly conserved among all genotypes. It is responsible for translation and initiation of the viral protein. In present study, IRES was targeted by designing variants of reported antigen binding fragment (Fab) through affinity maturation approach. Affinity maturation strategy allowed the rational antibody designing with better biophysical properties and antibody-antigen binding interactions. Complementarity determining regions of reported Fab (wild type) were assessed and docked with IRES. Best generated model of Fab was selected and subjected to alanine scanning Three sets of insilico mutations for variants (V) designing were selected; single (1-71), double (a-j) and triple (I-X). Redocking of IRES-Fab variants consequently enabled the discovery of three variants exhibiting better docking score as compared to the wild type Fab. V1, V39 and V4 exhibited docking scores of -446.51, -446.52 and-446.29 kcal/mol respectively which is better as compared to the wild type Fab that exhibited the docking score of -351.23 kcal/mol. Variants exhibiting better docking score were screened for aggregation propensity by assessing the aggregation prone regions in Fab structure. Total A3D scores of wild type Fab, V1, V4 and V39 were predicted as -315.325, -312.727, -316.967 and -317.545 respectively. It is manifested that solubility of V4 and V39 is comparable to wild type Fab. In future, development and invitro assessment of these promising Fab HCV3 variants is aimed., Competing Interests: The authors declare that they have no competing interests., (Copyright: © 2023 Ejaz et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
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- 2023
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183. Genomic characterization of the first mpox and varicella-zoster co-infection in Pakistan (2023) through next-generation sequencing.
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Umair M, Jamal Z, Haider SA, Hakim R, Ammar M, Ali Q, Akhtar N, Ikram A, and Salman M
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- Humans, Genomics, High-Throughput Nucleotide Sequencing, Pakistan, United States, Chickenpox diagnosis, Coinfection diagnosis, Herpes Zoster diagnosis, Mpox (monkeypox), Varicella Zoster Virus Infection
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The global mpox outbreak spanning 2022-2023 has affected numerous countries worldwide. In this study, we present the first report on the detection, whole-genome sequence, and coinfection of the mpox virus and varicella zoster virus (VZV) from Pakistan. During April-May 2023, samples from 20 suspected cases of mpox were tested at the National Institutes of Health, Islamabad among which 4 tested positive. All four cases had a travel history of Saudi Arabia. All the suspected samples were processed by using a Zymo research kit for DNA extraction, followed by qRT-PCR amplification by using a DaAn Gene detection kit for the mpox virus. Further, two of the positive samples with a low C
t value (<20) were subjected to whole-genome sequencing using a metagenomic approach on the iSeq (Illumina) platform. The sequencing results revealed Clade IIb and genotype A.2.1 of MPXV, which clustered with viruses from Slovenia and the UK in July and June 2022, respectively. Our analysis identified two novel nonsynonymous substitutions in mpox virus, namely V98I in OPG046 and P600S in OPG109. Furthermore, we successfully retrieved the complete genome of VZV from the same sample, belonging to Clade 5. This study represents the first positive case of MPXV in Pakistan and the coinfection of mpox and VZV by using a metagenome approach providing insights into their complete genomes. Our results highlight the importance of surveillance at the point of entries, strengthening lab capacities including next-generation sequencing, and using differential diagnosis for timely and accurate detection of mpox cases., (© 2023 Wiley Periodicals LLC.)- Published
- 2023
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184. Role of robotic approach in ileal pouch-anal anastomosis (IPAA): A systematic review of the literature.
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Khawaja Z, Jamal Z, Zafar N, Adnan N, Haider MI, Zafar A, and Siddiqi NN
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- Humans, Anastomosis, Surgical methods, Postoperative Complications epidemiology, Postoperative Complications etiology, Retrospective Studies, Treatment Outcome, Proctocolectomy, Restorative adverse effects, Proctocolectomy, Restorative methods, Robotic Surgical Procedures methods, Colonic Pouches adverse effects
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Restorative proctocolectomy with ileal pouch-anal anastomosis (IPAA) has become standard surgical treatment of choice in patients with ulcerative colitis (UC) and familial adenomatous polyposis (FAP) in which the medical management fails. Despite the wide use of laparoscopic method, the enhanced and innovative features that come with the robotic platform, such as endo-wrist technology, 3D visualization, surgeon-controlled camera and motion scaling, make it an appealing choice. This study aims to investigate the feasibility and safety of robotic approach for proctectomy or proctocolectomy with IPAA as compared to conventional laparoscopic approach. A systematic review was completed for studies done between 2010 and 2022 comparing the robotic approach with the laparoscopic approach. Nine studies were found to be feasible to be included in this review. In terms of the outcomes, although the mean operating time was slightly higher than the laparoscopic approach, the other outcomes, such as mean blood loss, return of the bowel movement, mean hospital stay, and conversion to open, were found to be significantly lower in the robotic approach as compared to both laparoscopic and conventional open techniques. Despite the overall increased rate of complications combined from all the studies, the rate of significant complications such as anastomotic leaks requiring readmission and return to theater was also found to be substantially less. This study concludes that although robotic approach is in its initial stages for pelvic surgeries, it can be safely employed due to improved dexterity and visibility., (© 2022. Crown.)
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- 2023
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185. The Role of MexCD-OprJ and MexEF-OprN Efflux Systems in the Multiple Antibiotic Resistance of Pseudomonas aeruginosa Isolated from Clinical Samples.
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Jamal Z, Gholami M, Ebrahimzadeh MA, and Goli HR
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- Bacterial Outer Membrane Proteins genetics, Bacterial Outer Membrane Proteins metabolism, Drug Resistance, Microbial, Anti-Bacterial Agents pharmacology, Anti-Bacterial Agents metabolism, Piperacillin pharmacology, Piperacillin metabolism, Tazobactam metabolism, Tazobactam pharmacology, Microbial Sensitivity Tests, Membrane Transport Proteins genetics, Membrane Transport Proteins metabolism, Pseudomonas aeruginosa genetics
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Increasing antimicrobial resistance and the development of multi-drug resistant (MDR) Pseudomonas aeruginosa is dependent on the expression of efflux pumps. This study aimed to investigate the role of overexpression of MexCD-OprJ and MexEF-OprN efflux pumps in reduced susceptibility to antimicrobial agents among P. aeruginosa strains. Totally, 100 clinical isolates of P. aeruginosa were collected from patients and the strains were identified by standard diagnostic tests. The MDR isolates were detected using the disk agar diffusion method. The expression levels of MexCD-OprJ and MexEF-OprN efflux pumps were evaluated by the real-time PCR. Forty-one isolates showed MDR phenotype, while piperacillin-tazobactam and levofloxacin were the most- and least-effective antibiotics, respectively. Also, all 41 MDR isolates showed a more than tenfold increase in the expression of mexD and mexF genes. In this study, a significant relationship was observed between the rate of antibiotic resistance, the emergence of MDR strains, and increasing the expression levels of MexEF-OprN and MexCD-OprJ efflux pumps (P < 0.05). Efflux systems mediated resistance was a noteworthy mechanism causative to multidrug resistance in P. aeruginosa clinical isolates. The study results demonstrated mexE and mexF overexpression as the primary mechanism conferring in the emergence of MDR phenotypes among P. aeruginosa strains. In addition, we also show that piperacillin/tazobactam exhibited a stronger ability in the management of infections caused by MDR P. aeruginosa in this area., (© 2023. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.)
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- 2023
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186. Routine cerebral embolic protection in transcatheter aortic valve implantation: rationale and design of the randomised British Heart Foundation PROTECT-TAVI trial.
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Kharbanda RK, Perkins AD, Kennedy J, Banning AP, Baumbach A, Blackman DJ, Dodd M, Evans R, Hildick-Smith D, Jamal Z, Ludman P, Palmer S, Stables R, and Clayton T
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- Humans, Prospective Studies, Heart, Treatment Outcome, Aortic Valve surgery, Risk Factors, Transcatheter Aortic Valve Replacement adverse effects, Aortic Valve Stenosis therapy, Stroke etiology, Stroke prevention & control, Stroke epidemiology, Embolic Protection Devices
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Transcatheter aortic valve implantation (TAVI) is an established treatment for aortic stenosis. Cerebral embolic protection (CEP) devices may impact periprocedural stroke by capturing debris destined for the brain. However, there is a lack of high-quality randomised trial evidence supporting the use of CEP during TAVI. The British Heart Foundation (BHF) PROTECT-TAVI trial will address whether the routine use of CEP reduces the incidence of stroke in patients undergoing TAVI. BHF PROTECT-TAVI is a prospective, open-label, outcome-adjudicated, multicentre randomised controlled trial. The trial is open to all adult patients scheduled for TAVI at participating specialist cardiac centres across the United Kingdom who are able to receive the CEP device. The trial will recruit 7,730 participants. Participants will be randomised in a 1:1 ratio to undergo TAVI with CEP or TAVI without CEP (standard of care). The primary outcome is the incidence of stroke at 72 hours post-TAVI. Key secondary outcomes include the incidence of stroke and all-cause mortality up to 12 months post-TAVI, disability and cognitive outcomes, stroke severity, access site complications and a health economics analysis. The sample size of 7,730 participants has 80% power to detect a 33% relative risk reduction from a 3% incidence of the primary outcome in the controls. Trial recruitment commenced in October 2020. As of October 2022, 3,068 patients have been enrolled. BHF PROTECT-TAVI is designed to provide definitive evidence on the clinical efficacy and cost-effectiveness of using routine CEP with the SENTINEL device to reduce stroke in TAVI.
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- 2023
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187. Evolution and lessons from an integrated service delivery network in North West Syria.
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Witter S, Diaconu K, Bou-Orm I, Jamal Z, Shroff ZC, Mahmoud A, Daher M, and Varma V
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Background: Northwest Syria (NWS) is a complex and extremely fragile operating environment, with more than 2.8 million people needing humanitarian assistance. To support a common standard of care delivery and enable coordination among the multiple providers in NWS, WHO developed an Essential Health Services package (EHSP) in 2016-17 and subsequently supported a facility network model to deliver the EHSP. This article provides an evaluation of the network to date, aiming to inform further development of the network and draw wider lessons for application of similar approaches in complex emergency settings., Methods: This mixed method study included document review, participatory, qualitative and quantitative data, gathered in the first half of 2021. Participatory data came from two group model building workshops with 21 funders and implementers. Semi-structured interviews with 81 funders, health professionals and community members were also conducted. Analyses of the workshops and interviews was inductive, however a deductive approach was used for synthesising insights across this and the document review. The final component was a survey of health providers (59 health care professionals) and service users (233 pregnant women and 214 persons living with NCDs) across network and other comparable facilities, analysed using routine descriptive and inferential statistics. Findings across all methods were triangulated., Results: The study finds that the network and its accompanying essential service package were relevant to the dynamic and challenging context, with high but shifting population needs and multiple uncoordinated providers. Judged in relation to its original goals of comprehensive, coordinated services, equitable access and efficient service delivery, the data indicate that gains have been made in all three areas through the network, although attribution is challenging, given the complex environment. The context remains challenging, with shifting boundaries and populations displaced by conflict, difficulties in retaining staff, the need to import medicines and supplies across borders, and governance gaps., Conclusion: This study adds to a very limited literature on coordinated network approaches used to raise care quality and improve referrals and efficiency in a complex emergency setting. Although areas of ongoing challenge, including for sustainability, are noted, the network demonstrated some resilience strategies and can provide lessons for other similar contexts., (© 2023. The Author(s).)
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- 2023
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188. Genomic Characterization of Dengue Virus Outbreak in 2022 from Pakistan.
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Umair M, Haider SA, Rehman Z, Jamal Z, Ali Q, Hakim R, Bibi S, Ikram A, and Salman M
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Pakistan, a dengue-endemic country, has encountered several outbreaks during the past decade. The current study aimed to explore the serotype and genomic diversity of dengue virus responsible for the 2022 outbreak in Pakistan. From August to October 2022, NS-1 positive blood samples (n = 343) were collected from dengue patients, among which, (85%; n = 293) were positive based on RT-PCR. In terms of gender and age, dengue infection was more prevalent in male patients (63%; n = 184), with more adults (21-30 years; n = 94) being infected. The serotyping results revealed DENV-2 to be the most predominant serotype (62%; n = 183), followed by DENV-1 (37%; n = 109) and DENV-3 (0.32%; n = 1). Moreover, a total of 10 samples (DENV-2; n = 8, DENV-1; n = 2) were subjected to whole-genome sequencing. Among these, four were collected in early 2022, and six were collected between August and October 2022. Phylogenetic analysis of DENV-2 sequenced samples (n = 8) revealed a monophyletic clade of cosmopolitan genotype IVA, which is closely related to sequences from China and Singapore 2018, and DENV-1 samples (n = 2) show genotype III, which is closely related to Pakistan isolates from 2019. We also reported the first whole genome sequence of a coinfection case (DENV1-DENV2) in Pakistan detected through a meta-genome approach. Thus, dengue virus dynamics reported in the current study warrant large-scale genomic surveillance to better respond to future outbreaks.
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- 2023
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189. Social determinants and mental health needs of Palestine refugees and UNRWA responses in Gaza during the COVID-19 pandemic: a qualitative assessment.
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Jamal Z, ElKhatib Z, AlBaik S, Horino M, Waleed M, Fawaz F, Loffreda G, Seita A, Witter S, and Diaconu K
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- Child, Female, Humans, Adolescent, Adult, Pandemics, Social Determinants of Health, Social Factors, Mental Health, COVID-19 epidemiology
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Background: Due to pre-existing difficulties, refugees are especially susceptible to the negative effects of the pandemic; nonetheless, the pandemic's effect on this group is still unclear. The purpose of this study was to determine the effects of the COVID-19 pandemic on the mental health of Palestine refugees in Gaza by identifying the role of social determinants. During the pandemic, the United Nations Relief and Works Agency for Palestine Refugees in the Near East (UNRWA) enacted a number of policies and measures. The purpose of this research was to assess their efficacy and acceptability., Methods: This qualitative study took place between August and November 2020. Twenty-nine key-informant interviews were conducted remotely with UNRWA Headquarters, field and clinical staff in Gaza and with community members, aged ≥18 years and residing in Rafah and Jabalia camps. We sought informed consent verbally or via email. Data was coded based on the framework for social determinants of mental health., Results: Interview results indicated that the relationship might be unidirectional, with COVID-19 causing the degradation of living conditions and vice versa, with living conditions exacerbating the COVID-19 situation by facilitating virus transmission. In other instances, the association between mental health determinants and COVID-19 might be bidirectional. In terms of experiencing violence and anxieties, women, children, and daily-paid employees were significantly more disadvantaged than other groups in the community. UNRWA modified its service delivery techniques in order to continue providing essential services. In general, UNRWA's strategies throughout the pandemic were deemed beneficial, but insufficient to meet the needs of Gazans., Conclusion: The pandemic highlights the need to go beyond disease treatment and prevention to address social determinants to improve refugees' health and reduce their susceptibility to future shocks. UNRWA has rapidly implemented telemedicine and mental telehealth services, making it imperative to assess the efficacy of these novel approaches to provide care at a distance. A long-term option may be to employ a hybrid strategy, which combines online and in-person therapy., (© 2022. The Author(s).)
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- 2022
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190. Breakthrough cases of Omicron and Delta variants of SARS-CoV-2 during the fifth wave in Pakistan.
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Jamal Z, Haider M, Ikram A, Salman M, Rana MS, Rehman Z, Haider SA, Ammar M, Nisar N, and Umair M
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- Female, Humans, Male, Pakistan epidemiology, Pandemics, COVID-19 epidemiology, SARS-CoV-2 genetics
- Abstract
COVID-19 pandemic has severely affected Pakistan with 1,557,134 cases as of August 4, 2022. However, the data regarding breakthrough infections in Pakistan is scant. Hence, the objective was to analyze SARS-CoV-2 breakthrough infections with respect to vaccines and variants during the fifth wave in Pakistan. Therefore, the Department of Virology (NIH, Pakistan) genotyped 2,467 randomly selected individuals between November 2021 and February 2022 using the SNPsig
® SARS-CoV-2 (EscapePLEX) kit (PrimerDesign, UK). P681R and K417N mutations were used to distinguish delta and omicron. Data on the patient's age, gender, date of collection, variant, and vaccination status were analyzed using Statistical Package for Social Sciences (SPSS) software. Among 2,467 genotyped samples, Omicron was detected in 58.6% ( n = 1445), Delta in 40.4% ( n = 998) and undetermined/wildtype variant in 24 samples. The vaccination status of omicron-positive patients showed (49.7%; n = 718/1445) and Delta-positive patients (39.67%; n = 396/998) to be fully vaccinated. Of note, a high percentage 85% of breakthrough cases ( n = 947) were identified among fully vaccinated individuals ( n = 1114). Among them, 85.9% ( n = 617/718) belonged to omicron and 83.3% ( n = 330/396) to delta. Moreover, 76.7% ( n = 855) of vaccinated individuals ( n = 1114) received Sinopharm ( n = 432) and Sinovac ( n = 423) vaccines. The majority of breakthrough subjects who contracted Omicron were vaccinated with Sinopharm (93.0%, n = 256) and delta with Cansino (100%, n = 44). Individuals vaccinated with Sinovac showed the most frequent breakthrough cases for both Omicron and Delta variant between the 4th and 6th months ( n = 278) after primary vaccination as compared to the 7th to 9th months ( n = 24) category. While in case of Sinopharm, maximum breakthrough cases occurred between 7th to 9th months ( n = 234) as compared to the 4th to 6th months ( n = 120) after primary vaccination. Omicron and Delta breakthrough cases in men ( n = 364 and 193) are more frequently seen than women ( n = 253 and 138) respectively and breakthrough majority cases ( n = 392) occurred in individuals aged 18-33 years. Breakthrough cases limiting monitoring in Pakistan impose a substantial constraint on policymakers' ability to take timely effective decisions. Since the current study consists of only a 2,467-genotyped sample, comprehensive data should be analyzed., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Jamal, Haider, Ikram, Salman, Rana, Rehman, Haider, Ammar, Nisar and Umair.)- Published
- 2022
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191. Morpho-palynological investigation of gymnospermal flora from subalpine and alpine zones of northern Pakistan using LM and SEM.
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Kayani S, Hussain M, Ahmad M, Khan MA, Butt MA, Ahmed SN, Rashid S, Jamal Z, and Nazir HM
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- Cycadopsida, Microscopy, Electron, Scanning, Pakistan, Pollen anatomy & histology, Tracheophyta
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The pollen morphology, with special reference to exine sculpture, of some species of the gymnosperms was assessed for the first time from the subalpine and alpine zones of western Himalayas northern Pakistan. The pollen of all these species is airborne and allergenic, so pollen morphology helps for identification of this allergenic pollen at specific level. Different morpho-palynological characteristics were analyzed including size range of pollen, polar and equatorial diameter ratio, exine ornamentation, sculpturing, exine thickness, pollen type, and shape. For accurate and quick identification of species, taxonomic key was made based on different morpho-palynological characteristics. The quantitative data were processed using SPSS software. Gymnospermal pollen includes inaperturate, rarely 1-colpate observed in (Cupressaceae), hexazonocolpate in (Ephedraceae), vesiculate, bissacate in (Pinaceae), and inaperturate in (Taxaceae). Different pollen shapes observed were prolate (4 spp), sub-spheroidal (7 spp), and oblate (1 spp). Variation was observed in exine sculpturing granular (4 spp), reticulate (1 spp), areolate-punctate (3 spp), and psilate (2 spp). This is based on the analysis of 10 plants belonging to four families of gymnosperms. Distinct pollen shape has emerged as the most diagnostic feature to separate some genera such as spheroidal in (Cupressaceae, Taxaceae), prolate and radiosymmetrical in (Ephedraceae), and bilateral in (Pinaceae). Exine thickness and sculpturing proved to be helpful at generic and specific levels. The results reinforced the significance of gymnospermal pollen morphological features which were used as aid for valuable taxonomic tool in plant systematics., (© 2021 Wiley Periodicals LLC.)
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- 2022
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192. Alternobaric Vertigo
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Francescon D, Jamal Z, and Cooper JS
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Alternobaric vertigo is a benign condition that affects individuals traveling in environments with changing ambient pressures, such as SCUBA diving or aviation, though it has also been reported in patients utilizing positive airway pressure breathing assistance. It is the direct result of an incongruency in middle ear pressures caused by incomplete or insufficient equalization, typically while moving from an area of higher pressure to one of lower pressure. Numerous factors may increase the likelihood of experiencing this phenomenon, including recent upper respiratory infections, decongestants, or abnormal Eustachian tube morphology. The vertigo is typically considered mild and usually resolves with further ascent and with the use of equalization techniques to restore similar pressures between the two chambers, though it has been reported to persist for days or weeks., (Copyright © 2022, StatPearls Publishing LLC.)
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- 2022
193. Ozone Toxicity
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Swanson TJ, Jamal Z, and Chapman J
- Abstract
Ozone normally occurs in a gas state as three atoms of oxygen (O) linked in a cyclic structure and is a by-product of water purification, bleaching, and any process generating a spark or electric arc in the presence of oxygen. It is also found in the atmosphere, with higher altitudes containing higher levels of ozone. It is found in the stratosphere, where it absorbs various ultraviolet radiation. Ozone is also an environmental air pollutant, along with others, such as sulfur dioxide and particulate matter. In spite of this, ozone can be generated by medical devices for therapeutic purposes. Potential medical applications of ozone therapy have a wide range, including 1) limiting postoperative pain after dental extraction when used as a gel, 2) repairing inner ear damage caused by acoustic trauma, 3) reducing coronary stent restenosis when applied as an auto-hem-transfusion, and 4) enhancing methicillin-resistant Staphylococcus aureus elimination in mediastinitis when used in conjunction with antibiotics. Outside of medicine, ozone has been proposed for use in various settings, such as in the pretreatment of textile wastewater. While ozone can cause health troubles, it can also react with chemicals found in many products to lead to other potentially toxic substances, such as formaldehyde. Despite proponents for its use and its potential applications, toxicity can occur even at environmental levels and may be related to cardiac, respiratory, and neurologic events. With the wide range of possible applications and toxicity that can occur at environmental levels from within a home, research on ozone use and toxicity is likely to increase in the future., (Copyright © 2022, StatPearls Publishing LLC.)
- Published
- 2022
194. Carbon Dioxide Detector
- Author
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Nowicki T, Jamal Z, and London S
- Abstract
The measurement of carbon dioxide (CO2) was first developed in the early 1900s; however, it was complex and of limited clinical use. On the most basic level, end-tidal CO2 (ETCO2) detectors are used to measure the exhaled concentration of carbon dioxide. The concentration of exhaled CO2 correlates to the arterial concentration of CO2, although multiple factors can impact the relationship. Technological advances have allowed CO2 to become a common measurement in healthcare with many clinical applications. Although CO2 detectors ultimately measure exhaled CO2, there are design differences between some units. Detectors can be divided into quantitative and qualitative types. Qualitative detectors simply demonstrate the presence or absence of CO2. The most basic unit of this type is the colorimetric detector producing a color change as the gas flows through a litmus paper film in the airway circuit. Qualitative detectors are primarily used to initially confirm proper placement of an endotracheal tube by demonstrating the presence (connoting successful placement in the trachea) or lack (esophageal placement) of exhaled CO2. These detectors are usually very simple, light and portable devices that do not require power. Quantitative detectors measure the level of CO2 that is exhaled and therefore, provide more detailed information. Qualitative detection can be further subdivided into capnography and capnometry. Capnography produces a waveform in a graphic format, while capnometry provides a numeric display of the CO2 concentration. Waveform capnography provides more information to the clinician. Alterations of the waveform morphology can be interpreted to provide clues to the clinical situation. Their location in the airway circuit is also used to categorize detectors. These are typically divided into mainstream and sidestream devices. Mainstream detectors utilize an IR sensor positioned directly within the path of gas flow and produced real-time graphs of the CO2 waveform. These tend to be more costly units and are used primarily for intubated patients. Sidestream detectors are located off the main path of flow in the airway circuit. Sidestream detectors utilize often use small diameter tubing leading to a detector that allows gas sampling. Nasal monitoring of end-tidal CO2 typically makes use of this configuration. There are some pitfalls and considerations when using CO2 detectors. Fluid such as vomitus, frothy secretions from a patient experiencing in acute pulmonary edema, sputum from pneumonia, or moisture can render CO2 detectors ineffective. The detector paper in colorimetric units is particularly sensitive to fluids. Mainstream detectors are located directly in the path of the airway circuit and therefore increase the volume of undesirable dead space. Sidestream detectors, on the other hand, may experience a delay compared to mainstream detectors because of the remote location of the sensor., (Copyright © 2022, StatPearls Publishing LLC.)
- Published
- 2022
195. Dakin Solution
- Author
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Keyes M, Jamal Z, and Thibodeau R
- Abstract
Dakin solution, also called Dakin fluid or Carrel-Dakin fluid, is a dilute sodium hypochlorite (NaClO) solution commonly known as bleach. The mixture of sodium peroxide (NaO) and hydrochloric acid (HCl) produces sodium hypochlorite. The main active agent in Dakin solution is created when the chlorine in the solution reacts with water in the environment to form hypochlorous acid (HClO). This hypochlorous acid produces a potent antibacterial effect in tissues. This activity reviews the mechanism of action, adverse event profile, toxicity, and administration of Dakin solution as it applies to the clinical setting., (Copyright © 2022, StatPearls Publishing LLC.)
- Published
- 2022
196. Cowden Disease
- Author
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Garofola C, Jamal Z, and Gross GP
- Abstract
Cowden disease, also known as Cowden syndrome or multiple hamartoma syndrome, is a genodermatosis originally described in 1963 by Lloyd and Dennis. It is an uncommon condition that is inherited in an autosomal dominant fashion and is part of a spectrum of other disorders that have mutations in the phosphatase and tensin homolog gene ( PTEN ). Cowden syndrome represents the most common phenotypical presentation of this spectrum and classically is characterized by multiple hamartomas that can occur in any organ. Characteristically, patients with Cowden syndrome develop mucocutaneous lesions and macrocephaly. The majority of patients affected with the disease go on to develop a malignant neoplasm of the thyroid, endometrium, or breast. An interprofessional approach to treatment is necessary, with cancer screening tests paramount. Medications currently being studied show encouraging results., (Copyright © 2022, StatPearls Publishing LLC.)
- Published
- 2022
197. Pharmaceutics
- Author
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Marino M, Jamal Z, and Siccardi MA
- Abstract
Pharmaceutics is the overall process of developing a new chemical entity into an approved therapy that is safe and effective in treating or preventing disease. It is a complex process requiring multiple scientific, medical, legal, commercial, and regulatory expertise. On average, it typically takes at least ten years for a new drug to complete the process from initial discovery to the retail marketplace, with clinical trials alone taking six to seven years on average. The Tufts Center for the Study of Drug Development announced that it calculated that it costs pharmaceutical companies $2.6 billion to develop a new drug. This figure has been subject to question, as the raw numbers on which they base the analysis have not been made available. The driving factor of this estimate is the cost of failed drug development attempts, with 80% of new compounds discontinued during their development. The steps involved in bringing a new chemical entity to the market as a drug involve the stages of discovery, chemical optimization and production, preclinical testing, pharmacology, and toxicology testing, early clinical trials establishing proof of concept, registration or pivotal clinical trials showing safety and efficacy in the target patient population and finally regulatory approval., (Copyright © 2022, StatPearls Publishing LLC.)
- Published
- 2022
198. Leech Bite
- Author
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Conley K, Jamal Z, and Juergens AL
- Abstract
Leeches are hermaphroditic parasites of phylum Annelida and class Hirudinea. There are over 600 species of leeches. A minority of these are sanguinivorous and the cause of human morbidity. Historically, leeches have been used for medicinal purposes with the earliest recorded being 1500 BC. Leeches have continued to be used in modern medicine primarily in reconstructive surgery. An adult leech can ingest 1 milliliter per minute of blood, and the area of attachment can bleed for 10 hours to as long as 7 days in some instances. Land leeches can penetrate thick skin, while aquatic leeches attach to mucous membranes leading to prolonged bleeding. Leeches are used intentionally in reconstructive surgery where a flap or replanted digit has developed venous congestion. The leeches drain the excess venous blood, increasing the chances of survival of the flap or replant., (Copyright © 2022, StatPearls Publishing LLC.)
- Published
- 2022
199. Bursitis
- Author
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Williams CH, Jamal Z, and Sternard BT
- Abstract
Bursitis is a swelling or inflammation of a bursa, which is a synovium-lined, sac-like structure found throughout the body near bony prominences and between bones, muscles, tendons, and ligaments. There are over 150 known bursae in the human body, and their function is to facilitate movement in the musculoskeletal system, creating a cushion between tissues that move against one another. When bursitis occurs, the bursa enlarges with fluid, and any movement against or direct pressure upon the bursa will precipitate pain for the patient. There are many causes of bursitis, including overuse injury, infectious disease, trauma, and inflammatory disorders. The name bursitis itself is often a misnomer, as not all forms of bursitis are due to a primary inflammatory process but are rather a swelling of the bursa due to a noxious stimulus., (Copyright © 2022, StatPearls Publishing LLC.)
- Published
- 2022
200. Carotenemia
- Author
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Al Nasser Y, Jamal Z, and Albugeaey M
- Abstract
First described in 1919 by Hess and Meyers, carotenemia is the medical terminology describing yellow-orange skin pigmentation due to high carotene levels in the blood. Excessive consumption of fruits and vegetables high in carotene content is often the culprit. Historically, carotenemia is a relatively old condition mentioned in a few old medical case reports. This condition was also reported during World War 1 and World War 2, when people mostly consumed a plant-based diet due to food shortages and famine. Carotenoids are organic compounds found in various plants and food items. Beta-Carotene is the main carotenoid found in plants and is more often responsible for this condition. Carotenemia is often first encountered by primary care providers. Although benign, this condition is often confused with jaundice, leading to unnecessary investigations. The condition of carotenemia is benign; however, it can lead to a wrong diagnosis of jaundice. Orangeness may also bear a significant symbolic significance. Carotinemia was originally observed as xanthosis diabetica by von Noorden in 1904, who noted it to be more prominent on the palms and soles and in the nasolabial folds., (Copyright © 2022, StatPearls Publishing LLC.)
- Published
- 2022
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