449 results on '"Bonnet, Maryline"'
Search Results
152. Varying efficacy of artesunate+amodiaquine and artesunate+sulphadoxine-pyrimethamine for the treatment of uncomplicated falciparum malaria in the Democratic Republic of Congo: a report of two in-vivo studies
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Bonnet, Maryline, primary, van den Broek, Ingrid, additional, van Herp, Michel, additional, Urrutia, Pedro Pablo Palma, additional, van Overmeir, Chantal, additional, Kyomuhendo, Juliet, additional, Ndosimao, Célestin Nsibu, additional, Ashley, Elizabeth, additional, and Guthmann, Jean-Paul, additional
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- 2009
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153. Characteristics of drug-resistant tuberculosis in Abkhazia (Georgia), a high-prevalence area in Eastern Europe
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Pardini, Manuela, primary, Niemann, Stefan, additional, Varaine, Francis, additional, Iona, Elisabetta, additional, Meacci, Francesca, additional, Orrù, Germano, additional, Yesilkaya, Hasan, additional, Jarosz, Thierry, additional, Andrew, Peter, additional, Barer, Mike, additional, Checchi, Francesco, additional, Rinder, Heinz, additional, Orefici, Graziella, additional, Rüsch-Gerdes, Sabine, additional, Fattorini, Lanfranco, additional, Oggioni, Marco Rinaldo, additional, and Bonnet, Maryline, additional
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- 2009
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154. Multiple Origins and Regional Dispersal of Resistant dhps in African Plasmodium falciparum Malaria
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Pearce, Richard J., primary, Pota, Hirva, additional, Evehe, Marie-Solange B., additional, Bâ, El-Hadj, additional, Mombo-Ngoma, Ghyslain, additional, Malisa, Allen L., additional, Ord, Rosalynn, additional, Inojosa, Walter, additional, Matondo, Alexandre, additional, Diallo, Diadier A., additional, Mbacham, Wilfred, additional, van den Broek, Ingrid V., additional, Swarthout, Todd D., additional, Getachew, Asefaw, additional, Dejene, Seyoum, additional, Grobusch, Martin P., additional, Njie, Fanta, additional, Dunyo, Samuel, additional, Kweku, Margaret, additional, Owusu-Agyei, Seth, additional, Chandramohan, Daniel, additional, Bonnet, Maryline, additional, Guthmann, Jean-Paul, additional, Clarke, Sian, additional, Barnes, Karen I., additional, Streat, Elizabeth, additional, Katokele, Stark T., additional, Uusiku, Petrina, additional, Agboghoroma, Chris O., additional, Elegba, Olufunmilayo Y., additional, Cissé, Badara, additional, A-Elbasit, Ishraga E., additional, Giha, Hayder A., additional, Kachur, S. Patrick, additional, Lynch, Caroline, additional, Rwakimari, John B., additional, Chanda, Pascalina, additional, Hawela, Moonga, additional, Sharp, Brian, additional, Naidoo, Inbarani, additional, and Roper, Cally, additional
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- 2009
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155. Real-time PCR/MCA assay using fluorescence resonance energy transfer for the genotyping of resistance related DHPS-540 mutations in Plasmodium falciparum
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Mens, Petra F, primary, van Overmeir, Chantal, additional, Bonnet, Maryline, additional, Dujardin, Jean-Claude, additional, and d'Alessandro, Umberto, additional
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- 2008
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156. Efficacy of antimalarial treatment in Guinea: in vivo study of two artemisinin combination therapies in Dabola and molecular markers of resistance to sulphadoxine-pyrimethamine in N'Zérékoré
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Bonnet, Maryline, primary, Roper, Cally, additional, Félix, Martine, additional, Coulibaly, Léonie, additional, Kankolongo, Gabriel Mufuta, additional, and Guthmann, Jean Paul, additional
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- 2007
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157. Usefulness of the BACTEC MGIT 960 System for Isolation of Mycobacterium tuberculosis from Sputa Subjected to Long-Term Storage
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Pardini, Manuela, primary, Varaine, Francis, additional, Bonnet, Maryline, additional, Orefici, Graziella, additional, Oggioni, Marco Rinaldo, additional, and Fattorini, Lanfranco, additional
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- 2007
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158. MOLECULAR MARKERS ASSOCIATED WITH PLASMODIUM FALCIPARUM RESISTANCE TO SULFADOXINE-PYRIMETHAMINE IN THE DEMOCRATIC REPUBLIC OF CONGO
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COHUET, SANDRA, primary, VAN HERP, MICHEL, additional, D’ALESSANDRO, UMBERTO, additional, BONNET, MARYLINE, additional, VAN OVERMEIR, CHANTAL, additional, and GUTHMANN, JEAN-PAUL, additional
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- 2006
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159. Direct microscopy versus sputum cytologyanalysis and bleach sedimentation for diagnosisof tuberculosis: a prospective diagnostic study.
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Hepple, Pamela, Nguele, Pascal, Greig, Jane, Bonnet, Maryline, and Sizaire, Vinciane
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MICROSCOPY ,TUBERCULOSIS ,SPUTUM ,CYTOLOGY ,MEDICAL research - Abstract
Background: Diagnostic options for pulmonary tuberculosis in resource-poor settings are commonly limited to smear microscopy. We investigated whether bleach concentration by sedimentation and sputum cytology analysis (SCA) increased the positivity rate of smear microscopy for smear-positive tuberculosis. Methods: We did a prospective diagnostic study in a Médecins Sans Frontières-supported hospital in Mindouli, Republic of Congo. Three sputum samples were obtained from 280 consecutive pulmonary tuberculosis suspects, and were processed according to WHO guidelines for direct smear microscopy. The remainder of each sputum sample was homogenised with 2.6% bleach, sedimented overnight, smeared, and examined blinded to the direct smear result for acid-fast bacilli (AFB). All direct smears were assessed for quality by SCA. If a patient produced fewer than three good-quality sputum samples, further samples were requested. Sediment smear examination was performed independently of SCA result on the corresponding direct smear. Positivity rates were compared using McNemar's test. Results: Excluding SCA, 43.2% of all patients were diagnosed as positive on direct microscopy of up to three samples. 47.9% were diagnosed on sediment microscopy, with 48.2% being diagnosed on direct microscopy, sediment microscopy, or both. The positivity rate increased from 43.2% to 47.9% with a case definition of one positive smear (≥1 AFB/100 high power fields) of three, and from 42.1% to 43.9% with two positive smears. SCA resulted in 87.9% of patients producing at least two good-quality sputum samples, with 75.7% producing three or more. Using a case definition of one positive smear, the incremental yield of bleach sedimentation was 14/121, or 11.6% (95% CI 6.5-18.6, p = 0.001) and in combination with SCA was 15/121, or 12.4% (95% CI 7.1-19.6, p = 0.002). Incremental yields with two positive smears were 5/118, or 4.2% (95% CI 1.4-9.6, p = 0.062) and 7/118, or 5.9% (95% CI 2.4-11.8, p = 0.016), respectively. Conclusions: The combination of bleach sedimentation and SCA resulted in significantly increased microscopy positivity rates with a case definition of either one or two positive smears. Implementation of bleach sedimentation led to a significant increase in the diagnosis of smear-positive patients. Implementation of SCA did not result in significantly increased diagnosis of tuberculosis, but did result in improved sample quality. Requesting extra sputum samples based on SCA results, combined with bleach sedimentation, could significantly increase the detection of smear-positive patients if routinely implemented in resource-limited settings where gold standard techniques are not available. We recommend that a pilot phase is undertaken before routine implementation to determine the impact in a particular context. [ABSTRACT FROM AUTHOR]
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- 2010
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160. Child Contact Case Management—A Major Policy-Practice Gap in High-Burden Countries.
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Vasiliu, Anca, Salazar-Austin, Nicole, Trajman, Anete, Lestari, Trisasi, Mtetwa, Godwin, Bonnet, Maryline, and Casenghi, Martina
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RESOURCE mobilization ,TUBERCULOSIS - Abstract
The 2021 Global Tuberculosis (TB) report shows slow progress towards closing the pediatric TB detection gap and improving the TB preventive treatment (TPT) coverage among child and adolescent contacts. This review presents the current knowledge around contact case management (CCM) in low-resource settings, with a focus on child contacts, which represents a key priority population for CCM and TPT. Compelling evidence demonstrates that CCM interventions are a key gateway for both TB case finding and identification of those in need of TPT, and their yield and effectiveness should provide a strong rationale for prioritization by national TB programs. A growing body of evidence is now showing that innovative models of care focused on community-based and patient-centered approaches to household contact investigation can help narrow down the CCM implementation gaps that we are currently facing. The availability of shorter and child-friendly TPT regimens for child contacts provide an additional important opportunity to improve TPT acceptability and adherence. Prioritization of TB CCM implementation and adequate resource mobilization by ministries of health, donors and implementing agencies is needed to timely close the gap. [ABSTRACT FROM AUTHOR]
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- 2022
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161. Tuberculosis prevention: current strategies and future directions.
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Vasiliu, Anca, Martinez, Leonardo, Gupta, Rishi K., Hamada, Yohhei, Ness, Tara, Kay, Alexander, Bonnet, Maryline, Sester, Martina, Kaufmann, Stefan H.E., Lange, Christoph, and Mandalakas, Anna M.
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LATENT tuberculosis , *MYCOBACTERIUM tuberculosis , *TUBERCULOSIS , *RESEARCH & development , *VACCINATION - Abstract
An estimated one fourth of the world's population is infected with Mycobacterium tuberculosis, and 5–10% of those infected develop tuberculosis in their lifetime. Preventing tuberculosis is one of the most underutilized but essential components of curtailing the tuberculosis epidemic. Moreover, current evidence illustrates that tuberculosis manifestations occur along a dynamic spectrum from infection to disease rather than a binary state as historically conceptualized. Elucidating determinants of transition between these states is crucial to decreasing the tuberculosis burden and reaching the END-TB Strategy goals as defined by the WHO. Vaccination, detection of infection, and provision of preventive treatment are key elements of tuberculosis prevention. This review provides a comprehensive summary of recent evidence and state-of-the-art updates on advancements to prevent tuberculosis in various settings and high-risk populations. We identified relevant studies in the literature and synthesized the findings to provide an overview of the current state of tuberculosis prevention strategies and latest research developments. We present the current knowledge and recommendations regarding tuberculosis prevention, with a focus on M. bovis Bacille-Calmette-Guérin vaccination and novel vaccine candidates, tests for latent infection with M. tuberculosis, regimens available for tuberculosis preventive treatment and recommendations in low- and high-burden settings. Effective tuberculosis prevention worldwide requires a multipronged approach that addresses social determinants, and improves access to tuberculosis detection and to new short tuberculosis preventive treatment regimens. Robust collaboration and innovative research are needed to reduce the global burden of tuberculosis and develop new detection tools, vaccines, and preventive treatments that serve all populations and ages. [Display omitted] [ABSTRACT FROM AUTHOR]
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- 2024
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162. Use of Colorimetric Culture Methods for Detection of Mycobacterium tuberculosisComplex Isolates from Sputum Samples in Resource-Limited Settings
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Boum, Yap, Orikiriza, Patrick, Rojas-Ponce, Gabriel, Riera-Montes, Margarita, Atwine, Daniel, Nansumba, Margaret, Bazira, Joel, Tuyakira, Eleanor, De Beaudrap, Pierre, Bonnet, Maryline, and Page, Anne-Laure
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ABSTRACTDespite recent advances, tuberculosis (TB) diagnosis remains imperfect in resource-limited settings due to its complexity and costs, poor sensitivity of available tests, or long times to reporting. We present a report on the use of colorimetric methods, based on the detection of mycobacterial growth using colorimetric indicators, for the detection of Mycobacterium tuberculosisin sputum specimens. We evaluated the nitrate reductase assay (NRA), a modified NRA using para-nitrobenzoic acid (PNB) (NRAp), and the resazurin tube assay using PNB (RETAp) to differentiate tuberculous and nontuberculous mycobacteria. The performances were assessed at days 18 and 28 using mycobacterium growth indicator tube (MGIT) and Löwenstein-Jensen (LJ) medium culture methods as the reference standards. We enrolled 690 adults with suspected pulmonary tuberculosis from a regional referral hospital in Uganda between March 2010 and June 2011. At day 18, the sensitivities and specificities were 84.6% and 90.0% for the NRA, 84.1% and 92.6% for the NRAp, and 71.2% and 99.3% for the RETAp, respectively. At day 28, the sensitivity of the RETAp increased to 82.6%. Among smear-negative patients with suspected TB, sensitivities at day 28 were 64.7% for the NRA, 61.3% for the NRAp, and 50% for the RETAp. Contamination rates were found to be 5.4% for the NRA and 6.7% for the RETAp, compared with 22.1% for LJ medium culture and 20.4% for MGIT culture. The median times to positivity were 10, 7, and 25 days for colorimetric methods, MGIT culture, and LJ medium culture,respectively. Whereas the low specificity of the NRA/NRAp precludes it from being used for TB diagnosis, the RETAp might provide an alternative to LJ medium culture to decrease the time to culture results in resource-poor settings.
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- 2013
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163. Laboratory development of a simple stool sample processing method diagnosis of pediatric tuberculosis using Xpert Ultra.
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Lounnas, Manon, Diack, Abibatou, Nicol, Mark P., Eyangoh, Sara, Wobudeya, Eric, Marcy, Olivier, Godreuil, Sylvain, and Bonnet, Maryline
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Stool samples are alternatives to respiratory samples for bacteriological confirmation of childhood tuberculosis but require intensive laboratory processing before molecular testing to remove PCR inhibitors and debris. We aimed to develop a centrifuge-free processing method for use in resource-limited settings based on a sucrose-flotation method that showed good sensitivity for childhood tuberculosis diagnosis. In an in vitro study using Xpert MTB/RIF Ultra on stool samples spiked with defined bacterial concentrations of Mycobacterium tuberculosis (MTB) , we compared different simplification parameters to the reference sucrose-flotation method. Best methods were selected based on the rate of invalid/error results and on sensitivity, compared to the reference method on stools spiked at 10
3 colony forming units (CFU)/g MTB. For final selection, we tested the best parameter combinations at 102 CFU/g. Out of 13 different parameter combinations, three were tested at 102 CFU/g. The best combination used 0.5 g stool, manual shaking, no filtration, 30-min sedimentation, and a 1:3.6 dilution ratio. This method gave 10% invalid/error results and a sensitivity of 70% vs 63% at 103 CFU/g and 53% vs 58% at 102 CFU/g compared to the reference method. This pre-clinical study was able to develop a centrifuge-free processing method to facilitate stool Xpert Ultra testing. [ABSTRACT FROM AUTHOR]- Published
- 2020
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164. Field Evaluation of a Simple Fluorescence Method for Detection of Viable Mycobacterium tuberculosisin Sputum Specimens during Treatment Follow-Up
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Schramm, Birgit, Hewison, Cathy, Bonte, Laurence, Jones, Warren, Camélique, Olivier, Ruangweerayut, Ronnatrai, Swaddiwudhipong, Witaya, and Bonnet, Maryline
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ABSTRACTSimple tuberculosis (TB) treatment monitoring tools are needed. We assessed the performance of fluorescein-diacetate (FDA) smear microscopy for detection of viable Mycobacterium tuberculosisin sputum specimens (n= 288) of TB cases under treatment compared to culture (17.4% culture positivity). FDA sensitivity was moderate (83.7% [95% confidence interval {CI}, 70.3 to 92.6]), and specificity was low (66.1% [59.5 to 72.2]). The good negative predictive value (94.8% [90.1 to 97.8]) and negative likelihood ratio (0.2) suggest using this method to rule out treatment failure in settings without access to culture.
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- 2012
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165. Evolutionary history and global spread of the Mycobacterium tuberculosis Beijing lineage (vol 47, pg 242, 2015)
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Merker, Matthias, Blin, Camille, Mona, Stefano, Duforet-Frebourg, Nicolas, Lecher, Sophie, Willery, Eve, Blum, Michael, Ruesch-Gerdes, Sabine, Mokrousov, Igor, Aleksic, Eman, Allix-Beguec, Caroline, Antierens, Annick, Augustynowicz-Kopec, Ewa, Ballif, Marie, Barletta, Francesca, Beck, Hans Peter, Clifton E Barry, Bonnet, Maryline, Borroni, Emanuele, Campos-Herrero, Isolina, Cirillo, Daniela, Cox, Helen, Crowe, Suzanne, Crudu, Valeriu, Diel, Roland, Drobniewski, Francis, Fauville-Dufaux, Maryse, Gagneux, Sebastien, Ghebremichael, Solomon, Hanekom, Madeleine, Hoffner, Sven, Jiao, Wei-Wei, Kalon, Stobdan, Kohl, Thomas A., Kontsevaya, Irina, Lillebeak, Troels, Maeda, Shinji, Nikolayevskyy, Vladyslav, Rasmussen, Michael, Rastogi, Nalin, Samper, Sofia, Sanchez-Padilla, Elisabeth, Savic, Ranislava, Shamputa, Isdore Chola, Shen, Adong, Sng, Li-Hwei, Stakenas, Petras, Toit, Kadri, Varaine, Francis, Vukovic, Dragana, Wahl, Celine, Warren, Robin, Supply, Philip, Niemann, Stefan, and Wirth, Thierry
166. Gametocyte carriage in uncomplicated Plasmodium falciparum malaria following treatment with artemisinin combination therapy: a systematic review and meta-analysis of individual patient data
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Abdulla, Salim, Achan, Jane, Adam, Ishag, Alemayehu, Bereket H, Allan, Richard, Allen, Elizabeth N, Ankivar, Anupkumar R, Arinaitwe, Emmanuel, Ashley, Elizabeth A, Asih, Puji Budi Setia, Awab, Ghulam Rahib, Barnes, Karen I, Bassat, Quique, Baudin, Elisabeth, Björkman, Anders, Bompart, Francois, Bonnet, Maryline, Borrmann, Steffen, Bousema, Teun, Carrara, Verena I, Cenci, Fabio, Checchi, Francesco, Cot, Michel, Dahal, Prabin, D'Alessandro, Umberto, Deloron, Phillippe, Djimdé, Abdoulaye, Dondorp, Arjen, Dorsey, Grant, Doumbo, Ogobara K, Drakeley, Chris J, Duparc, Stephan, Espie, Emmanuelle, Faiz, Abul, Falade, Catherine O, Fanello, Caterina, Faucher, Jean-François, Faye, Babacar, Filler, Scott, Fofana, Bakary, Fogg, Carole, Gansane, Adama, Gaye, Oumar, Genton, Blaise, Gething, Peter W, Gonzalez, Raquel, Grandesso, Francesco, Greenwood, Brian, Grivoyannis, Anastasia, Guerin, Philippe J, Hamed, Kamal, Hatz, Cristoph, Hay, Simon I, Hodel, Eva Maria, Humphreys, Georgina S, Hwang, Jimee, Janssens, Bart, Juma, Elizabeth, Kachur, S Patrick, Kager, Piet, Kamya, Moses R, Kapulu, Melissa, Karema, Corine, Kayentao, Kassoum, Kiechel, Jean R, Kofoed, Poul-Erik, Lameyre, Valerie, Lee, Sue J, Lell, Bertrand, Lima, Nines, Marsh, Kevin, Mårtensson, Andreas, Massougbodji, Achille, Mayxay, Mayfong, McGready, Rose, Menan, Hervé, Menendez, Clara, Mens, Petra, Meremikwu, Martin, Mockenhaupt, Frank P, Moreira, Clarissa, Nabasumba, Carolyn, Nambozi, Michael, Ndiaye, Jean-Louis, Newton, Paul N, Ngasala, Billy E, Nosten, Francois, Nsanzabana, Christian, Offianan, Andre Toure, Oguike, Mary, Ogutu, Bernards R, Olliaro, Piero, Omar, Sabah A, Osorio, Lyda, Owusu-Agyei, Seth, Penali, Louis K, Pene, Mbaye, Peshu, Judy, Premji, Zul, Price, Ric N, Ramharter, Michael, Rombo, Lars, Roper, Cally, Rosenthal, Philip J, Sagara, Issaka, Sawa, Patrick, Schallig, Henk D F H, Schramm, Birgit, Shekalaghe, Seif A, Sibley, Carol H, Sirima, Sodiomon, Smithuis, Frank, Sow, Doudou, Staedke, Sarah G, Stepniewska, Kasia, Sutanto, Inge, Sutherland, Colin J, Swarthout, Todd D, Syafruddin, Din, Sylla, Khadime, Talisuna, Ambrose O, Taylor, Walter R, Tema, Emmanuel A, Ter Kuile, Feiko, Tinto, Halidou, Tjitra, Emiliana, Ursing, Johan, Valecha, Neena, van den Broek, Ingrid, van Herp, Michel, van Vugt, Michele, Ward, Stephen A, White, Nicholas J, Winstanley, Peter A, Woodrow, Charles J, Yeka, Adoke, Zwang, Julien, and WWARN Gametocyte Study Group
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Male ,0301 basic medicine ,gametocytes ,Plasmodium falciparum/drug effects ,Artemisinins/therapeutic use ,Amodiaquine/therapeutic use ,chemistry.chemical_compound ,0302 clinical medicine ,Recurrence ,Malaria, Falciparum ,Artemisinin ,GeneralLiterature_REFERENCE(e.g.,dictionaries,encyclopedias,glossaries) ,Medicine(all) ,Microscopy ,biology ,Mefloquine ,Malaria, Falciparum/drug therapy ,Hazard ratio ,General Medicine ,Middle Aged ,Artemisinins ,3. Good health ,Drug Combinations ,Child, Preschool ,Drug Therapy, Combination ,Research Article ,medicine.drug ,medicine.medical_specialty ,plasmodium falciparum ,Plasmodium falciparum ,030231 tropical medicine ,Gametocyte ,malaria ,Malària ,Amodiaquine ,Host-Parasite Interactions ,Antimalarials ,03 medical and health sciences ,Internal medicine ,parasitic diseases ,medicine ,Humans ,Proportional Hazards Models ,Resistència als medicaments ,drug resistance ,business.industry ,medicine.disease ,biology.organism_classification ,Malaria ,Logistic Models ,lnfectious Diseases and Global Health Radboud Institute for Health Sciences [Radboudumc 4] ,030104 developmental biology ,chemistry ,Host-Parasite Interactions/drug effects ,Artesunate ,Drug resistance ,Antimalarials/therapeutic use ,Immunology ,business - Abstract
BACKGROUND: Gametocytes are responsible for transmission of malaria from human to mosquito. Artemisinin combination therapy (ACT) reduces post-treatment gametocyte carriage, dependent upon host, parasite and pharmacodynamic factors. The gametocytocidal properties of antimalarial drugs are important for malaria elimination efforts. An individual patient clinical data meta-analysis was undertaken to identify the determinants of gametocyte carriage and the comparative effects of four ACTs: artemether-lumefantrine (AL), artesunate/amodiaquine (AS-AQ), artesunate/mefloquine (AS-MQ), and dihydroartemisinin-piperaquine (DP). METHODS: Factors associated with gametocytaemia prior to, and following, ACT treatment were identified in multivariable logistic or Cox regression analysis with random effects. All relevant studies were identified through a systematic review of PubMed. Risk of bias was evaluated based on study design, methodology, and missing data. RESULTS: The systematic review identified 169 published and 9 unpublished studies, 126 of which were shared with the WorldWide Antimalarial Resistance Network (WWARN) and 121 trials including 48,840 patients were included in the analysis. Prevalence of gametocytaemia by microscopy at enrolment was 12.1 % (5887/48,589), and increased with decreasing age, decreasing asexual parasite density and decreasing haemoglobin concentration, and was higher in patients without fever at presentation. After ACT treatment, gametocytaemia appeared in 1.9 % (95 % CI, 1.7-2.1) of patients. The appearance of gametocytaemia was lowest after AS-MQ and AL and significantly higher after DP (adjusted hazard ratio (AHR), 2.03; 95 % CI, 1.24-3.12; P = 0.005 compared to AL) and AS-AQ fixed dose combination (FDC) (AHR, 4.01; 95 % CI, 2.40-6.72; P < 0.001 compared to AL). Among individuals who had gametocytaemia before treatment, gametocytaemia clearance was significantly faster with AS-MQ (AHR, 1.26; 95 % CI, 1.00-1.60; P = 0.054) and slower with DP (AHR, 0.74; 95 % CI, 0.63-0.88; P = 0.001) compared to AL. Both recrudescent (adjusted odds ratio (AOR), 9.05; 95 % CI, 3.74-21.90; P < 0.001) and new (AOR, 3.03; 95 % CI, 1.66-5.54; P < 0.001) infections with asexual-stage parasites were strongly associated with development of gametocytaemia after day 7. CONCLUSIONS: AS-MQ and AL are more effective than DP and AS-AQ FDC in preventing gametocytaemia shortly after treatment, suggesting that the non-artemisinin partner drug or the timing of artemisinin dosing are important determinants of post-treatment gametocyte dynamics.
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167. Mycobacterium tuberculosis lineage 4 comprises globally distributed and geographically restricted sublineages
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Fenner, Lukas, Vilanova, Griselda Tudo, Bower, James, Wilkinson, Robert, Gehre, Florian, Borrell, Sonia, Alani, Issam, Malla, Bijaya, Wampande, Eddie, Gao, Qian, Akter, Suriya, Stewart-Isherwood, Lynsey, Koch, Anastasia, Trauner, Andrej, Cirillo, Daniela Maria, Sanchez-Padilla, Elisabeth, Ntoumi, Francine, De Jong, Bouke C, Supply, Philip, Suffys, Philip, Hoelscher, Michael, Luo, Tao, Niemann, Stefan, Gil-Brusola, Ana, Eisenach, Kathleen, Joloba, Moses, Asante-Poku, Adwoa, Brites, Daniela, Stucki, David, Crudu, Valeriu, Kato-Maeda, Midori, Ballif, Marie, Comas, Iñaki, Barletta, Francesca, Otero, Larissa, Bakonyte, Daiva, Fyfe, Janet, Stakenas, Petras, Globan, Maria, Ndung'u, Perpetual Wangui, Moldovan, Olga, Penlap Beng, Veronique N, Beck, Hans-Peter, Liu, Qingyun, Diel, Roland, Thomas, Jackson, Moreno, Milagros, Al-Hajoj, Sahal, Basu, Indira, Toit, Kadri, Rutaihwa, Liliana, Saraiva, Margarida, Boom, W Henry, Revathi, Gunturu, Skenders, Girts, Ntinginya, Nyanda E, Ley, Serej D, Hoffner, Sven, Macedo, Rita, Bonnet, Maryline, Gail-Bekker, Linda, Carter, E Jane, Guthrie, Jennifer L, Coscolla, Mireia, Ssengooba, Willy, Jamieson, Frances, Gagneux, Sebastien, Rachow, Andrea, Mardassi, Helmi, Diero, Lameck, Jeljeli, Leïla, Yeboah-Manu, Dorothy, Frank, Matthias, Vasconcellos, Sidra E G, and Egger, Matthias
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610 Medicine & health ,360 Social problems & social services ,3. Good health
168. Evolutionary history and global spread of the Mycobacterium tuberculosis Beijing lineage
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Blum, Michael G B, Blin, Camille, Drobniewski, Francis, Wirth, Thierry, Stakenas, Petras, Allix-Béguec, Caroline, Barletta, Francesca, Sanchez-Padilla, Elisabeth, Warren, Robin, Vukovic, Dragana, Toit, Kadri, Augustynowicz-Kopeć, Ewa, Borroni, Emanuele, Varaine, Francis, Barry, Clifton E, Fauville-Dufaux, Maryse, Gagneux, Sébastien, Mokrousov, Igor, Cox, Helen, Samper, Sofia, Duforet-Frebourg, Nicolas, Kohl, Thomas A, Maeda, Shinji, Bonnet, Maryline, Aleksic, Eman, Wahl, Céline, Hanekom, Madeleine, Rüsch-Gerdes, Sabine, Hoffner, Sven, Campos-Herrero, Isolina, Ballif, Marie, Jiao, Wei-Wei, Crowe, Suzanne, Rastogi, Nalin, Ghebremichael, Solomon, Lillebæk, Troels, Sng, Li-Hwei, Cirillo, Daniela, Kalon, Stobdan, Kontsevaya, Irina, Antierens, Annick, Rasmussen, Michael, Nikolayevskyy, Vladyslav, Supply, Philip, Crudu, Valeriu, Diel, Roland, Savic, Branislava, Merker, Matthias, Niemann, Stefan, Beck, Hans Peter, Lecher, Sophie, Shen, Adong, Shamputa, Isdore Chola, Willery, Eve, and Mona, Stefano
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610 Medicine & health ,360 Social problems & social services ,3. Good health - Abstract
Mycobacterium tuberculosis strains of the Beijing lineage are globally distributed and are associated with the massive spread of multidrug-resistant (MDR) tuberculosis in Eurasia. Here we reconstructed the biogeographical structure and evolutionary history of this lineage by genetic analysis of 4,987 isolates from 99 countries and whole-genome sequencing of 110 representative isolates. We show that this lineage initially originated in the Far East, from where it radiated worldwide in several waves. We detected successive increases in population size for this pathogen over the last 200 years, practically coinciding with the Industrial Revolution, the First World War and HIV epidemics. Two MDR clones of this lineage started to spread throughout central Asia and Russia concomitantly with the collapse of the public health system in the former Soviet Union. Mutations identified in genes putatively under positive selection and associated with virulence might have favored the expansion of the most successful branches of the lineage.
169. Host-directed therapies for tackling multi-drug resistant tuberculosis: learning from the Pasteur-Bechamp debates
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Zumla, Alimuddin, Maeurer, Markus, Chakaya, Jeremiah, Hoelscher, Michael, Ntoumi, Francine, Rustomjee, Roxana, Vilaplana, Cristina, Yeboah-Manu, Dorothy, Rasolofo, Voahangy, Munderi, Paula, Singh, Nalini, Aklillu, Eleni, Padayatchi, Nesri, Macete, Eusebio, Kapata, Nathan, Mulenga, Modest, Kibiki, Gibson, Mfinanga, Sayoki, Nyirenda, Thomas, Mboko, Leonard, Garcia-Basteiro, Alberto L., Rakotosamimanana, Niaina, Bates, Matthew, Mwaba, Peter, Reither, Klaus, Gagneux, Sebastien, Edwards, Sarah, Mfinanga, Elirehema, Abdulla, Salim, Cardona, Pere-Joan, Russell, James B. W., Gant, Vanya, Noursadeghi, Mahdad, Elkington, Paul, Bonnet, Maryline, Menendez, Clara, Dieye, Tandakha N., Diarra, Bassirou, Maiga, Almoustapha, Aseffa, Abraham, Parida, Shreemanta, Wejse, Christian, Petersen, Eskild, Kaleebu, Pontiano, Oliver, Matt, Craig, Gill, Corrah, Tumena, Tientcheu, Leopold, Antonio, Martin, McHugh, Timothy D., Sheikh, Aziz, Ippolito, Giuseppe, Ramjee, Gita, Kaufmann, Stefan H. E., Churchyard, Gavin, Steyn, Adrie J. C., Grobusch, Martin P., Sanne, Ian, Martinson, Neil, Mandansein, Rajhmun, Wilkinson, Robert J., Wallis, Robert S., Mayosi, Bongani, Schito, Marco, Zumla, Alimuddin, Maeurer, Markus, Chakaya, Jeremiah, Hoelscher, Michael, Ntoumi, Francine, Rustomjee, Roxana, Vilaplana, Cristina, Yeboah-Manu, Dorothy, Rasolofo, Voahangy, Munderi, Paula, Singh, Nalini, Aklillu, Eleni, Padayatchi, Nesri, Macete, Eusebio, Kapata, Nathan, Mulenga, Modest, Kibiki, Gibson, Mfinanga, Sayoki, Nyirenda, Thomas, Mboko, Leonard, Garcia-Basteiro, Alberto L., Rakotosamimanana, Niaina, Bates, Matthew, Mwaba, Peter, Reither, Klaus, Gagneux, Sebastien, Edwards, Sarah, Mfinanga, Elirehema, Abdulla, Salim, Cardona, Pere-Joan, Russell, James B. W., Gant, Vanya, Noursadeghi, Mahdad, Elkington, Paul, Bonnet, Maryline, Menendez, Clara, Dieye, Tandakha N., Diarra, Bassirou, Maiga, Almoustapha, Aseffa, Abraham, Parida, Shreemanta, Wejse, Christian, Petersen, Eskild, Kaleebu, Pontiano, Oliver, Matt, Craig, Gill, Corrah, Tumena, Tientcheu, Leopold, Antonio, Martin, McHugh, Timothy D., Sheikh, Aziz, Ippolito, Giuseppe, Ramjee, Gita, Kaufmann, Stefan H. E., Churchyard, Gavin, Steyn, Adrie J. C., Grobusch, Martin P., Sanne, Ian, Martinson, Neil, Mandansein, Rajhmun, Wilkinson, Robert J., Wallis, Robert S., Mayosi, Bongani, and Schito, Marco
- Abstract
Tuberculosis remains a global emergency causing an estimated 1.5 million deaths annually. For several decades the major focus of tuberculosis treatment has been on antibiotic development targeting Mycobacterium tuberculosis. The lengthy tuberculosis treatment duration and poor treatment outcomes associated with multi-drug resistant tuberculosis (MDR-TB) are of major concern. The sparse new tuberculosis drug pipeline and widespread emergence of MDR-TB signal an urgent need for more innovative interventions to improve treatment outcomes. Building on the historical Pasteur-Bechamp debates on the role of the ``microbe'' vs the ``host internal milieu'' in disease causation, we make the case for parallel investments into host-directed therapies (HDTs). A range of potential HDTs are now available which require evaluation in randomized controlled clinical trials as adjunct therapies for shortening the duration of tuberculosis therapy and improving treatment outcomes for drug-susceptible tuberculosis and MDR-TB. Funder initiatives that may enable further research into HDTs are described.
170. Towards host-directed therapies for tuberculosis
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Zumla, Alimuddin, Maeurer, Markus, Chakaya, Jeremiah, Hoelscher, Michael, Ntoumi, Francine, Rustomjee, Roxana, Vilaplana, Cristina, Yeboah-Manu, Dorothy, Rasolofo, Voahangy, Munderi, Paula, Singh, Nalini, Aklillu, Eleni, Padayatchi, Nesri, Macete, Eusebio, Kapata, Nathan, Mulenga, Modest, Kibiki, Gibson, Mfinanga, Sayoki, Nyirenda, Thomas, Maboko, Leonard, Garcia-Basteiro, Alberto, Rakotosamimanana, Niaina, Bates, Matthew, Mwaba, Peter, Reither, Klaus, Gagneux, Sebastien, Edwards, Sarah, Mfinanga, Elirehema, Abdulla, Salim, Cardona, Pere-Joan, Russell, James B. W., Gant, Vanya, Noursadeghi, Mahdad, Elkington, Paul, Bonnet, Maryline, Menendez, Clara, Dieye, Tandakha N., Diarra, Bassirou, Maiga, Almoustapha, Aseffa, Abraham, Parida, Shreemanta, Wejse, Christian, Petersen, Eskild, Kaleebu, Pontiano, Oliver, Matt, Craig, Gill, Corrah, Tumena, Tientcheu, Leopold, Antonio, Martin, Rao, Martin, McHugh, Timothy D., Sheikh, Aziz, Ippolito, Giuseppe, Ramjee, Gita, Kaufmann, Stefan H. E., Churchyard, Gavin, Steyn, Andrie, Grobusch, Martin, Sanne, Ian, Martinson, Neil, Madansein, Rajhmun, Wilkinson, Robert J., Mayosi, Bongani, Schito, Marco, Wallis, Robert S., Network, Host-Directed Therapies, Zumla, Alimuddin, Maeurer, Markus, Chakaya, Jeremiah, Hoelscher, Michael, Ntoumi, Francine, Rustomjee, Roxana, Vilaplana, Cristina, Yeboah-Manu, Dorothy, Rasolofo, Voahangy, Munderi, Paula, Singh, Nalini, Aklillu, Eleni, Padayatchi, Nesri, Macete, Eusebio, Kapata, Nathan, Mulenga, Modest, Kibiki, Gibson, Mfinanga, Sayoki, Nyirenda, Thomas, Maboko, Leonard, Garcia-Basteiro, Alberto, Rakotosamimanana, Niaina, Bates, Matthew, Mwaba, Peter, Reither, Klaus, Gagneux, Sebastien, Edwards, Sarah, Mfinanga, Elirehema, Abdulla, Salim, Cardona, Pere-Joan, Russell, James B. W., Gant, Vanya, Noursadeghi, Mahdad, Elkington, Paul, Bonnet, Maryline, Menendez, Clara, Dieye, Tandakha N., Diarra, Bassirou, Maiga, Almoustapha, Aseffa, Abraham, Parida, Shreemanta, Wejse, Christian, Petersen, Eskild, Kaleebu, Pontiano, Oliver, Matt, Craig, Gill, Corrah, Tumena, Tientcheu, Leopold, Antonio, Martin, Rao, Martin, McHugh, Timothy D., Sheikh, Aziz, Ippolito, Giuseppe, Ramjee, Gita, Kaufmann, Stefan H. E., Churchyard, Gavin, Steyn, Andrie, Grobusch, Martin, Sanne, Ian, Martinson, Neil, Madansein, Rajhmun, Wilkinson, Robert J., Mayosi, Bongani, Schito, Marco, Wallis, Robert S., and Network, Host-Directed Therapies
- Abstract
The treatment of tuberculosis is based on combinations of drugs that directly target Mycobacterium tuberculosis. A new global initiative is now focusing on a complementary approach of developing adjunct host-directed therapies.
171. Prevalence and risk factors of brucellosis among febrile patients attending a community hospital in south western Uganda.
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Migisha, Richard, Dan Nyehangane, Boum, Yap, Page, Anne-Laure, Zúñiga-Ripa, Amaia, Conde-Álvarez, Raquel, Bagenda, Fred, and Bonnet, Maryline
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Human brucellosis, a chronic disease contracted through contact with animals and consuption of unpasteurized dairy products is underreported in limited-resource countries. This cross-sectional study aimed to determine the prevalence and risk factors of brucellosis among febrile patients attending a community hospital in South western Uganda. A questionnaire that captured socio-demographic, occupational and clinical data was administered. Blood samples were tested for Brucella antibodies using Rose Bengal Plate Test (RBPT) and blood culture with standard aerobic BACTEC bottle was done. Of 235 patients enrolled, prevalence of brucellosis (RBPT or culture confirmed) was 14.9% (95% CI 10.6-20.1) with a culture confrmation in 4.3% of the participants. The factors independently associated with brucellosis were consumption of raw milk (aOR 406.15, 95% CI 47.67-3461.69); history of brucellosis in the family (aOR 9.19, 95% CI 1.98-42.54); and selling hides and skins (aOR 162.56, 95% CI 2.86-9256.31). Hepatomegaly (p < 0.001), splenomegaly (p = 0.018) and low body mass index (p = 0.032) were more common in patients with brucellosis compared to others. Our findings reveal a high prevalence of brucellosis among febrile patients and highlight a need for implementing appropiate tests, public awareness activities and vaccination of animals to control and eliminate the disease. [ABSTRACT FROM AUTHOR]
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- 2018
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172. How Do the New Definitions for Multidrug-Resistant Tuberculosis Treatment Outcomes Really Perform?
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Bastard, Mathieu, Bonnet, Maryline, du Cros, Philipp, Khamraev, Atadjan Karimovich, Hayrapetyan, Armen, Kimenye, Kamene, Khurkhumal, Shazina, Dlamini, Themba, Telnov, Alex, Sanchez-Padilla, Elisabeth, Hewison, Cathy, and Varaine, Francis
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- 2015
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173. Adherence, tolerability, and outcome after 36 months of isoniazid-preventive therapy in 2 rural clinics of Swaziland
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Mueller, Yolanda, Mpala, Qhubekani, Kerschberger, Bernhard, Rusch, Barbara, Mchunu, Gugu, Mazibuko, Sikhathele, Bonnet, Maryline, and Lin., Wenyu
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- 2017
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174. The effect of dosing strategies on the therapeutic efficacy of artesunate-amodiaquine for uncomplicated malaria: a meta-analysis of individual patient data.
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WorldWide Antimalarial Resistance Network (WWARN) AS-AQ Study Group, Adjuik, Martin A, Allan, Richard, Anvikar, Anupkumar R, Ashley, Elizabeth A, Ba, Mamadou S, Barennes, Hubert, Barnes, Karen I, Bassat, Quique, Baudin, Elisabeth, Björkman, Anders, Bompart, François, Bonnet, Maryline, Borrmann, Steffen, Brasseur, Philippe, Bukirwa, Hasifa, Checchi, Francesco, Cot, Michel, Dahal, Prabin, and D'Alessandro, Umberto
- Abstract
Background: Artesunate-amodiaquine (AS-AQ) is one of the most widely used artemisinin-based combination therapies (ACTs) to treat uncomplicated Plasmodium falciparum malaria in Africa. We investigated the impact of different dosing strategies on the efficacy of this combination for the treatment of falciparum malaria.Methods: Individual patient data from AS-AQ clinical trials were pooled using the WorldWide Antimalarial Resistance Network (WWARN) standardised methodology. Risk factors for treatment failure were identified using a Cox regression model with shared frailty across study sites.Results: Forty-three studies representing 9,106 treatments from 1999-2012 were included in the analysis; 4,138 (45.4%) treatments were with a fixed dose combination with an AQ target dose of 30 mg/kg (FDC), 1,293 (14.2%) with a non-fixed dose combination with an AQ target dose of 25 mg/kg (loose NFDC-25), 2,418 (26.6%) with a non-fixed dose combination with an AQ target dose of 30 mg/kg (loose NFDC-30), and the remaining 1,257 (13.8%) with a co-blistered non-fixed dose combination with an AQ target dose of 30 mg/kg (co-blistered NFDC). The median dose of AQ administered was 32.1 mg/kg [IQR: 25.9-38.2], the highest dose being administered to patients treated with co-blistered NFDC (median = 35.3 mg/kg [IQR: 30.6-43.7]) and the lowest to those treated with loose NFDC-25 (median = 25.0 mg/kg [IQR: 22.7-25.0]). Patients treated with FDC received a median dose of 32.4 mg/kg [IQR: 27-39.0]. After adjusting for reinfections, the corrected antimalarial efficacy on day 28 after treatment was similar for co-blistered NFDC (97.9% [95% confidence interval (CI): 97.0-98.8%]) and FDC (98.1% [95% CI: 97.6%-98.5%]; P = 0.799), but significantly lower for the loose NFDC-25 (93.4% [95% CI: 91.9%-94.9%]), and loose NFDC-30 (95.0% [95% CI: 94.1%-95.9%]) (P < 0.001 for all comparisons). After controlling for age, AQ dose, baseline parasitemia and region; treatment with loose NFDC-25 was associated with a 3.5-fold greater risk of recrudescence by day 28 (adjusted hazard ratio, AHR = 3.51 [95% CI: 2.02-6.12], P < 0.001) compared to FDC, and treatment with loose NFDC-30 was associated with a higher risk of recrudescence at only three sites.Conclusions: There was substantial variation in the total dose of amodiaquine administered in different AS-AQ combination regimens. Fixed dose AS-AQ combinations ensure optimal dosing and provide higher antimalarial treatment efficacy than the loose individual tablets in all age categories. [ABSTRACT FROM AUTHOR]- Published
- 2015
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175. Usefulness of the BACTEC MGIT 960 System for Isolation of Mycobacterium tuberculosisfrom Sputa Subjected to Long-Term Storage
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Pardini, Manuela, Varaine, Francis, Bonnet, Maryline, Orefici, Graziella, Oggioni, Marco Rinaldo, and Fattorini, Lanfranco
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ABSTRACTThe recovery of Mycobacterium tuberculosisfrom sputa positive or negative for acid-fast bacilli that were stored for 17 ± 7 days and inoculated in the BACTEC MGIT 960 system (MGIT) was higher than that from sputa inoculated in Lowenstein-Jensen medium. MGIT is useful for isolation of M. tuberculosisfrom sputa subjected to long-term storage.
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- 2007
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176. Feasibility of a randomized clinical trial evaluating a community intervention for household tuberculosis child contact management in Cameroon and Uganda.
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Vasiliu, Anca, Tiendrebeogo, Georges, Awolu, Muhamed Mbunka, Akatukwasa, Cecilia, Tchakounte, Boris Youngui, Ssekyanzi, Bob, Tchounga, Boris Kevin, Atwine, Daniel, Casenghi, Martina, Bonnet, Maryline, on behalf of the CONTACT study group, Chauvet, Savine, de Carvalho, Elisabete, Ouedraogo, Sayouba, Cohn, Jennifer, Tchounga, Boris K., Tchakounté, Boris Y., Sih, Collette, Kana, Rogacien, and Youm, Eric
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CLINICAL trials , *CLUSTER randomized controlled trials , *TUBERCULOSIS , *MEDICAL personnel , *COMMUNITY health workers - Abstract
Background: One of the main barriers of the management of household tuberculosis child contacts is the necessity for parents to bring healthy children to the facility. We assessed the feasibility of a community intervention for tuberculosis (TB) household child contact management and the conditions for its evaluation in a cluster randomized controlled trial in Cameroon and Uganda. Methods: We assessed three dimensions of feasibility using a mixed method approach: (1) recruitment capability using retrospective aggregated data from facility registers; (2) acceptability of the intervention using focus group discussions with TB patients and in-depth interviews with healthcare providers and community leaders; and (3) adaptation, integration, and resources of the intervention in existing TB services using a survey and discussions with stakeholders. Results: Reaching the sample size is feasible in all clusters in 15 months with the condition of regrouping 2 facilities in the same cluster in Uganda due to decentralization of TB services. Community health worker (CHW) selection and training and simplified tools for contact screening, tolerability, and adherence of preventive therapy were key elements for the implementation of the community intervention. Healthcare providers and patients found the intervention of child contact investigations and TB preventive treatment management in the household acceptable in both countries due to its benefits (competing priorities, transport cost) as compared to facility-based management. TB stigma was present, but not a barrier for the community intervention. Visit schedule and team conduct were identified as key facilitators for the intervention. Conclusions: This study shows that evaluating a community intervention for TB child contact management in a cluster randomized trial is feasible in Cameroon and Uganda. Trial registration: Clini calTr ials. gov NCT03832023. Registered on February 6th 2019. [ABSTRACT FROM AUTHOR]
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- 2022
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177. Community intervention for child tuberculosis active contact investigation and management: study protocol for a parallel cluster randomized controlled trial.
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Vasiliu, Anca, Eymard-Duvernay, Sabrina, Tchounga, Boris, Atwine, Daniel, de Carvalho, Elisabete, Ouedraogo, Sayouba, Kakinda, Michael, Tchendjou, Patrice, Turyahabwe, Stavia, Kuate, Albert Kuate, Tiendrebeogo, Georges, Dodd, Peter J., Graham, Stephen M., Cohn, Jennifer, Casenghi, Martina, and Bonnet, Maryline
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CLUSTER randomized controlled trials , *HIV-positive children , *MEDICAL personnel , *TUBERCULOSIS - Abstract
Background: There are major gaps in the management of pediatric tuberculosis (TB) contact investigation for rapid identification of active tuberculosis and initiation of preventive therapy. This study aims to evaluate the impact of a community-based intervention as compared to facility-based model for the management of children in contact with bacteriologically confirmed pulmonary TB adults in low-resource high-burden settings.Methods/design: This multicenter parallel open-label cluster randomized controlled trial is composed of three phases: I, baseline phase in which retrospective data are collected, quality of data recording in facility registers is checked, and expected acceptability and feasibility of the intervention is assessed; II, intervention phase with enrolment of index cases and contact cases in either facility- or community-based models; and III, explanatory phase including endpoint data analysis, cost-effectiveness analysis, and post-intervention acceptability assessment by healthcare providers and beneficiaries. The study uses both quantitative and qualitative analysis methods. The community-based intervention includes identification and screening of all household contacts, referral of contacts with TB-suggestive symptoms to the facility for investigation, and household initiation of preventive therapy with follow-up of eligible child contacts by community healthcare workers, i.e., all young (< 5 years) child contacts or older (5-14 years) child contacts living with HIV, and with no evidence of TB disease. Twenty clusters representing TB diagnostic and treatment facilities with their catchment areas are randomized in a 1:1 ratio to either the community-based intervention arm or the facility-based standard of care arm in Cameroon and Uganda. Randomization was stratified by country and constrained on the number of index cases per cluster. The primary endpoint is the proportion of eligible child contacts who initiate and complete the preventive therapy. The sample size is of 1500 child contacts to identify a 10% difference between the arms with the assumption that 60% of children will complete the preventive therapy in the standard of care arm.Discussion: This study will provide evidence of the impact of a community-based intervention on household child contact screening and management of TB preventive therapy in order to improve care and prevention of childhood TB in low-resource high-burden settings.Trial Registration: ClinicalTrials.gov NCT03832023 . Registered on 6 February 2019. [ABSTRACT FROM AUTHOR]- Published
- 2021
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178. Risk score for predicting mortality including urine lipoarabinomannan detection in hospital inpatients with HIV-associated tuberculosis in sub-Saharan Africa: Derivation and external validation cohort study.
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Gupta-Wright, Ankur, Corbett, Elizabeth L., Wilson, Douglas, van Oosterhout, Joep J., Dheda, Keertan, Huerga, Helena, Peter, Jonny, Bonnet, Maryline, Alufandika-Moyo, Melanie, Grint, Daniel, Lawn, Stephen D., and Fielding, Katherine
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HOSPITAL mortality , *MULTIDRUG-resistant tuberculosis , *TUBERCULOSIS , *APACHE (Disease classification system) , *COHORT analysis , *HEALTH facilities , *CD4 lymphocyte count , *MORTALITY - Abstract
Background: The prevalence of and mortality from HIV-associated tuberculosis (HIV/TB) in hospital inpatients in Africa remains unacceptably high. Currently, there is a lack of tools to identify those at high risk of early mortality who may benefit from adjunctive interventions. We therefore aimed to develop and validate a simple clinical risk score to predict mortality in high-burden, low-resource settings.Methods and Findings: A cohort of HIV-positive adults with laboratory-confirmed TB from the STAMP TB screening trial (Malawi and South Africa) was used to derive a clinical risk score using multivariable predictive modelling, considering factors at hospital admission (including urine lipoarabinomannan [LAM] detection) thought to be associated with 2-month mortality. Performance was evaluated internally and then externally validated using independent cohorts from 2 other studies (LAM-RCT and a Médecins Sans Frontières [MSF] cohort) from South Africa, Zambia, Zimbabwe, Tanzania, and Kenya. The derivation cohort included 315 patients enrolled from October 2015 and September 2017. Their median age was 36 years (IQR 30-43), 45.4% were female, median CD4 cell count at admission was 76 cells/μl (IQR 23-206), and 80.2% (210/262) of those who knew they were HIV-positive at hospital admission were taking antiretroviral therapy (ART). Two-month mortality was 30% (94/315), and mortality was associated with the following factors included in the score: age 55 years or older, male sex, being ART experienced, having severe anaemia (haemoglobin < 80 g/l), being unable to walk unaided, and having a positive urinary Determine TB LAM Ag test (Alere). The score identified patients with a 46.4% (95% CI 37.8%-55.2%) mortality risk in the high-risk group compared to 12.5% (95% CI 5.7%-25.4%) in the low-risk group (p < 0.001). The odds ratio (OR) for mortality was 6.1 (95% CI 2.4-15.2) in high-risk patients compared to low-risk patients (p < 0.001). Discrimination (c-statistic 0.70, 95% CI 0.63-0.76) and calibration (Hosmer-Lemeshow statistic, p = 0.78) were good in the derivation cohort, and similar in the external validation cohort (complete cases n = 372, c-statistic 0.68 [95% CI 0.61-0.74]). The validation cohort included 644 patients between January 2013 and August 2015. Median age was 36 years, 48.9% were female, and median CD4 count at admission was 61 (IQR 21-145). OR for mortality was 5.3 (95% CI 2.2-9.5) for high compared to low-risk patients (complete cases n = 372, p < 0.001). The score also predicted patients at higher risk of death both pre- and post-discharge. A simplified score (any 3 or more of the predictors) performed equally well. The main limitations of the scores were their imperfect accuracy, the need for access to urine LAM testing, modest study size, and not measuring all potential predictors of mortality (e.g., tuberculosis drug resistance).Conclusions: This risk score is capable of identifying patients who could benefit from enhanced clinical care, follow-up, and/or adjunctive interventions, although further prospective validation studies are necessary. Given the scale of HIV/TB morbidity and mortality in African hospitals, better prognostic tools along with interventions could contribute towards global targets to reduce tuberculosis mortality. [ABSTRACT FROM AUTHOR]- Published
- 2019
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179. SNP-IT Tool for Identifying Subspecies and Associated Lineages of Mycobacterium tuberculosis Complex.
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Lipworth, Samuel, Jajou, Rana, de Neeling, Albert, Bradley, Phelim, van der Hoek, Wim, Maphalala, Gugu, Bonnet, Maryline, Sanchez-Padilla, Elizabeth, Diel, Roland, Niemann, Stefan, Iqbal, Zamin, Smith, Grace, Peto, Tim, Crook, Derrick, Walker, Timothy, and van Soolingen, Dick
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MYCOBACTERIA , *MYCOBACTERIUM tuberculosis , *SUBSPECIES , *TUBERCULOSIS - Abstract
The clinical phenotype of zoonotic tuberculosis and its contribution to the global burden of disease are poorly understood and probably underestimated. This shortcoming is partly because of the inability of currently available laboratory and in silico tools to accurately identify all subspecies of the Mycobacterium tuberculosis complex (MTBC). We present SNPs to Identify TB (SNP-IT), a single-nucleotide polymorphism-based tool to identify all members of MTBC, including animal clades. By applying SNP-IT to a collection of clinical genomes from a UK reference laboratory, we detected an unexpectedly high number of M. orygis isolates. M. orygis is seen at a similar rate to M. bovis, yet M. orygis cases have not been previously described in the United Kingdom. From an international perspective, it is possible that M. orygis is an underestimated zoonosis. Accurate identification will enable study of the clinical phenotype, host range, and transmission mechanisms of all subspecies of MTBC in greater detail. [ABSTRACT FROM AUTHOR]
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- 2019
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180. Xpert MTB/RIF diagnosis of childhood tuberculosis from sputum and stool samples in a high TB-HIV-prevalent setting.
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Orikiriza, Patrick, Nansumba, Margaret, Nyehangane, Dan, Bastard, Mathieu, Mugisha, Ivan Taremwa, Nansera, Denis, Mwanga-Amumpaire, Juliet, Boum, Yap, Kumbakumba, Elias, and Bonnet, Maryline
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TUBERCULOSIS diagnosis , *MYCOBACTERIUM tuberculosis , *SPUTUM , *MYCOBACTERIAL diseases , *JUVENILE diseases - Abstract
The Xpert MTB/RIF assay is a major advance for diagnosis of tuberculosis (TB) in high-burden countries but is limited in children by their difficulty to produce sputum. We investigated TB in sputum and stool from children with the aim of improving paediatric TB diagnosis. A prospective cohort of children with presumptive TB, provided two sputum or induced sputum at enrolment in a regional referral hospital in Uganda. Stool was collected from those started on TB treatment. All specimen were tested for Xpert MTB/RIF, mycobacteria growth indicator tube (MGIT), Lowenstein Jensen cultures and microscopy (except stool). We compared TB detection between age categories and assessed the performance of Xpert MTB/RIF in sputum and stool. Of the 392 children enrolled, 357 (91.1%) produced at least one sputum sample. Sputum culture yield was 13/357 (3.6%): 3/109 (2.6%), 3/89 (3.2%), 3/101 (2.6%) and 4/44 (8.2%) among children of < 2, 2-5, ≥ 5-10 and > 10 years, respectively (p = 0.599). Xpert MTB/RIF yield was 14/350 (4.0%): 3/104 (2.9%), 4/92 (4.3%), 3/88 (2.9%) and 4/50 (.0%), respectively (p = 0.283). Sensitivity and specificity of Xpert MTB/RIF in sputum against sputum culture were 90.9% (95% CI 58.7-99.8) and 99.1% (99.1-99.8). In stool, it was 55.6% (21.2-86.3) and 98.2% (98.2-100) against Xpert MTB/RIF and culture in sputum. Only a minority of children had microbiologically confirmed TB with a higher proportion in children above 10 years. Although sensitivity of Xpert MTB/RIF in stool was low, with good optimization, it might be a good alternative to sputum in children. [ABSTRACT FROM AUTHOR]
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- 2018
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181. Combattre les facteurs associés à un mauvais pronostic chez les adultes infectés par le VIH sous traitement antirétroviral en Afrique sub-Saharienne
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PEREZ-GABILLARD, Delphine, Bordeaux population health (BPH), Université de Bordeaux (UB)-Institut de Santé Publique, d'Épidémiologie et de Développement (ISPED)-Institut National de la Santé et de la Recherche Médicale (INSERM), Université de Bordeaux, Xavier Anglaret, STAR, ABES, Anglaret, Xavier, Ahmadou, Alioum, Bonnet, Maryline, Leroy, Valériane, and Yazdanpanah, Yazdan
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[SDV.MHEP] Life Sciences [q-bio]/Human health and pathology ,Sub-Saharan Africa ,Hiv ,Mortalité ,Prognosis ,Adultes ,Antiretroviral treatment ,Afrique sub-Saharienne ,Traitement antirétroviral ,Virus de l'immunodeficience humaine ,Pronostic ,Adults ,Mortality ,[SDV.MHEP]Life Sciences [q-bio]/Human health and pathology - Abstract
Antiretroviral therapy (ARV) has revolutionized the prognosis of HIV disease. With a well-conducted ARV treatment, the risk of morbidity and mortality is now close to that of the general population. A large proportion of morbidity events and deaths occurring in people on ARV therapy can now be described as "avoidable". To avoid these events, it is necessary to know the factors that contribute to them. Having an overview of these prognostic factors is not self-evident. The factors themselves, the methods used to qualify them as poor prognostic factors and the levels of evidence to reach this conclusion are potentially very different. In this document, we review the literature on factors associated with mortality of HIV-infected adults in sub-Saharan Africa and discuss the findings. We found 59 articles, 14 of which had only a univariate analysis result and 45 had a multivariate analysis result. The time periods covered by the study ranged from 1986 to 2018. The number of participants ranged from 100 to 40657. The average follow-up time ranged from 2 months to 6 years and the percentage of observed deaths ranged from 2.1% to 37%. Problems with data quality and informative censoring are real and frequent. Patients excluded from the analyses were not excluded or prematurely dropped out of the study by chance. A large number of participants does not systematically imply high robustness. The "clinical research" quality found in scientifically engineered trials and cohorts is not necessarily found in databases from routine care programs. "Severe morbidity" is often used more than "mortality" as a standard endpoint in intervention trials. When evidence of an association of a new intervention with mortality is established, it is often established secondarily through extended follow-up beyond the study follow-up as originally planned. If this extended follow-up is not done, low-powered mortality analyses should not be used to cast undue doubt on an intervention that has been shown to reduce severe morbidity. To reduce HIV-related mortality in sub-Saharan Africa, ARV treatment must be started as early as possible, cotrimoxazole and TB prophylaxis must be routinely provided (even in the ARV era), and efforts must be made to prevent non-adherence and, whenever necessary, to correct it rapidly. These are key messages that seem simple and well known but are still incompletely implemented. If these interventions were practiced everywhere, it is likely that the gain in survival would be dramatic. The identification of certain risk factors for mortality does not provide an immediate avenue for improvement, but it does indicate areas to work on. For example, ARV treatment does not totally correct for the loss of chance that active HBV infection represents before being put on ARV. This invites to develop ambitious programs to fight hepatitis B, and not to rely on ARV treatment alone under the argument that it contains active molecules against HBV. The use of inflammation or activation markers could be interesting in an individualized medicine approach to monitor low-level viral replication and orient ARV treatment accordingly., Le traitement antirétroviral (ARV) a révolutionné le pronostic de la maladie à VIH. Avec un traitement ARV bien conduit on peut maintenant retrouver un niveau de risque de morbi-mortalité proche de celui de la population générale. Une grande partie des événements morbides et des décès survenant chez les personnes sous ARV peuvent donc maintenant être qualifiés "d'évitables". Pour éviter ces événements, il faut connaître les facteurs qui les favorisent. Avoir une vue d'ensemble de ces facteurs pronostiques ne va pas de soi. Les facteurs eux-mêmes, les méthodes utilisées pour les qualifier de facteur de mauvais pronostic et les niveaux de preuve pour arriver à cette conclusion sont de natures potentiellement très différentes. Dans cette thèse, nous analysons la littérature consacrée aux facteurs associés à la mortalité des adultes infectés par le VIH en Afrique sub-Saharienne et nous en discutons les enseignements. Nous avons retrouvé 59 articles, dont 14 comportaient uniquement un résultat d'analyse univariable et 45 un résultat d'analyse multivariable. Les périodes concernées par l'étude s'échelonnaient de 1986 à 2018. Le nombre de participants variait de 100 à 40657. La durée de suivi moyenne s'échelonnait de 2 mois à 6 ans et le pourcentage de décès observés s'étendait de de 2.1% à 37%. Les problèmes de qualité des données et de censure informative sont réels et fréquents. Les patients exclus des analyses ne sont pas exclus ou sortis prématurément de l'étude par hasard. Un grand nombre de participants n’implique pas systématiquement une grande robustesse. La qualité de type "recherche clinique" qu’on trouve dans les essais et cohortes dotés d'un dispositif d'ingénierie scientifique ne se retrouve pas forcément dans les bases de données issues de programmes de soins de routine. La "morbidité sévère" est souvent plus utilisée que la "mortalité" comme critère de jugement standard dans les essais d'intervention. Lorsque la preuve d'association d'une nouvelle intervention avec la mortalité est établie, elle l'est souvent secondairement à la faveur d'un suivi prolongé au-delà du suivi dans l'étude tel qu'il était initialement prévu. Si ce suivi prolongé n'est pas fait, des analyses de mortalité dotées de faible puissance ne doivent pas amener à jeter à tort un doute sur une intervention qui a été démontrée efficace pour réduire la morbidité sévère. Pour diminuer la mortalité liée au VIH en Afrique sub-Saharienne il faut débuter le traitement ARV le plus tôt possible, pratiquer systématiquement (même à l'ère des ARV) une prophylaxie par le cotrimoxazole et une prophylaxie antituberculeuse, s'attacher à prévenir la non-observance et le cas échéant la corriger rapidement. Il s'agit de grands messages qui paraissent simples et bien connus mais sont encore incomplètement exploités. Si ces interventions étaient pratiquées partout, il est probable que le gain en survie serait spectaculaire. Le repérage de certains facteurs de risque de mortalité ne donne pas de piste d'amélioration immédiate, mais indique des sujets à travailler. Par exemple, le traitement ARV ne corrige pas totalement par la perte de chance que représente une infection par le VHB active avant la mise sous ARV. Ceci invite donc à développer des programmes ambitieux pour lutter contre l'hépatite B, et à ne pas compter sur le seul traitement ARV sous l'argument qu'il contient des molécules actives contre le VHB. L'utilisation des marqueurs d'inflammation ou d'activation pourrait être intéressante dans une approche de médecine individualisée pour monitorer la réplication virale à bas bruit et orienter le traitement ARV en conséquence.
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- 2021
182. Effects of Treatment Interruption Patterns on Treatment Success Among Patients With Multidrug-Resistant Tuberculosis in Armenia and Abkhazia.
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Bastard, Mathieu, Sanchez-Padilla, Elisabeth, Hewison, Cathy, Hayrapetyan, Armen, Khurkhumal, Shazina, Varaine, Francis, and Bonnet, Maryline
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TUBERCULOSIS patients , *MULTIDRUG-resistant tuberculosis , *LOGISTIC regression analysis , *PUBLIC health , *THERAPEUTICS - Abstract
Background. The success of the current treatment regimen for multidrug-resistant (MDR) tuberculosis is poor partly owing to a high default rate. Many studies have explored predictors of poor outcomes, but very few have assessed the effects of treatment interruptions on treatment outcomes for MDR tuberculosis. Methods. We conducted a retrospective analysis among patients with MDR tuberculosis enrolled in 2 MDR tuberculosis programs using regimens recommended by the World Health Organization under directly observed therapy. Treatment outcomes were defined as successful if the patient was cured or completed treatment and unsuccessful if the patient died or defaulted from treatment or if treatment failed. The effect of patterns of interruptions on treatment outcomes was assessed through multivariate logistic regression. Results. A total of 393 patients with MDR tuberculosis were included in the study; 171 (43.5%) had a successful outcome, and 222 (56.5%) an unsuccessful outcome: 39 (9.9%) died, 56 (14.3%) had failed treatment, and 127 (32.3%) defaulted from treatment. In multivariate analysis, long interruptions (⩾3 days) (adjusted odds ratio, 3.87; 95% confidence interval, 1.66-8.98) and short gaps (<10 days) between interruptions (3.94; 1.76-8.81) were independently associated with an unsuccessful treatment outcome. Discussion. This study shows that in a directly observed therapy-based MDR tuberculosis program, treatment interruptions at short intervals of ⩾3 days directly affect treatment outcome. [ABSTRACT FROM AUTHOR]
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- 2015
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183. Implementation of digital chest radiography for childhood tuberculosis diagnosis at district hospital level in six high tuberculosis burden and resources limited countries.
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Melingui BF, Basant J, Taguebue JV, Massom DM, Leroy Terquem E, Norval PY, Salomao A, Dim B, Tek CE, Borand L, Khosa C, Moh R, Mwanga-Amumpere J, Eang MT, Manhiça I, Mustapha A, Balestre E, Beneteau S, Wobudeya E, Marcy O, Orne-Gliemann J, and Bonnet M
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Objectives: Chest x-ray (CXR) plays an important role in childhood tuberculosis (TB) diagnosis, but access to quality CXR remains a major challenge in resource-limited settings. Digital CXR (d-CXR) can solve some image quality issues and facilitate their transfer for quality control. We assess the implementation of introducing d-CXR in 12 district hospitals (DHs) in 2021-2022 across Cambodia, Cameroon, Ivory Coast, Mozambique, Sierra Leone and Uganda as part of the TB-speed decentralisation study on childhood TB diagnosis., Methods: For digitisation of CXR, digital radiography (DR) plates were setup on existing analogue radiography devices. d-CXR were transferred to an international server at Bordeaux University and downloaded by sites' clinicians for interpretation. We assessed the uptake and performance of CXR services and health care workers' (HCW) perceptions of d-CXR implementation. We used a convergent mixed method approach utilising process data, individual interviews with 113 HCWs involved in performing or interpreting d-CXRs and site support supervision reports., Results: Of 3104 children with presumptive TB, 1642 (52.9%) had at least one d-CXR, including 1505, 136 and 1 children with one, two and three d-CXRs, respectively, resulting in a total of 1780 d-CXR. Of them, 1773 (99.6%) were of good quality and 1772/1773 (99.9%) were interpreted by sites' clinicians. One hundred and sixty-four children had no d-CXR performed despite attending the radiography department: 126, 37 and 1 with one, two and three attempts, respectively. d-CXRs were not performed in 21.6% (44/203) due to connectivity problem between the DR plate captor and the computer. HCW reported good perceptions of d-CXR and of the DR plates provided. The main challenge was the upload to and download from the server of d-CXRs due to limited internet access., Conclusion: d-CXR using DR plates was feasible at DH level and provided good quality images but required overcoming operational challenges., (© 2024 The Authors Tropical Medicine & International Health published by John Wiley & Sons Ltd.)
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- 2024
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184. Development of tuberculosis treatment decision algorithms in children below 5 years hospitalised with severe acute malnutrition in Zambia and Uganda: a prospective diagnostic cohort study.
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Chabala C, Roucher C, Ton Nu Nguyet MH, Babirekere E, Inambao M, Businge G, Kapula C, Shankalala P, Nduna B, Mulenga V, Graham S, Wobudeya E, Bonnet M, and Marcy O
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Background: In children with severe acute malnutrition (SAM) tuberculosis is common, challenging to diagnose, and often fatal. We developed tuberculosis treatment decision algorithms (TDAs) for children under the age of 5 years with SAM., Methods: In this prospective diagnostic study, we enrolled and followed up children aged <60 months hospitalised with SAM at three tertiary hospitals in Zambia and Uganda from 4 November 2019 to 20 June 2022. We included children aged 2-59 months with SAM as defined by WHO and hospitalised following the WHO clinical criteria. We excluded children with current or history of antituberculosis treatment within the preceding 3 months. They underwent tuberculosis symptom screening, clinical assessment, chest X-ray, abdominal ultrasound, Xpert MTB/RIF Ultra (Ultra) and culture on respiratory and stool samples with 6 months follow-up. Tuberculosis was retrospectively defined using the 2015 standard case definition for childhood tuberculosis. We used logistic regression to develop diagnostic prediction models for a one-step diagnosis and a two-step screening and diagnostic approaches. We derived scores from models using WHO-recommended thresholds for sensitivity and proposed TDAs. This study is registered with ClinicalTrials.gov, NCT04240990., Findings: Of 1906 children hospitalised with SAM during the study period, 1230 were screened, 1152 were eligible and 603 were enrolled. Of the 603 children enrolled-median age 15 (inter-quartile range (IQR): 11-20) months and 65 (11.0%) living with HIV-114 (18.9%) were diagnosed with tuberculosis, including 51 (8.5%) with microbiological confirmation and 104 (17.2%) initiated treatment at a median of 6(IQR: 2-10) days after inclusion. 108 children were retrospectively classified as having tuberculosis resulting in a prevalence of 17.9% (95% confidence intervals (CI): 15.1; 21.2). 75 (69.4%) children with tuberculosis reported cough of any duration, 32 (29.6%) cough ≥2 weeks and 11 (10.2%) tuberculosis contact history. 535 children had complete data and were included in the diagnostic prediction model. The one-step diagnostic model had 15 predictors, including Ultra, clinical, radiographic, and abdominal features, an area under the receiving operating curve (AUROC) of 0.910, and derived TDA sensitivity of 86.14% (95% CI: 78.07-91.56) and specificity of 80.88% (95% CI: 76.91-84.30). The two-step model had AUROCs of 0.750 and 0.912 for screening and diagnosis, respectively, and derived combined TDA sensitivity of 79.21% (95% CI: 70.30-85.98) and a specificity of 83.64% (95% CI: 79.87-86.82)., Interpretation: Tuberculosis prevalence was high among hospitalised children with SAM, with atypical clinical features. TDAs achieved satisfactory diagnostic accuracy and could be used to improve diagnosis in this vulnerable group., Funding: Unitaid., Competing Interests: All authors declare no competing interests., (© 2024 The Author(s).)
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- 2024
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185. A Global Tuberculosis Dictionary: unified terms and definitions for the field of tuberculosis.
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Garcia-Basteiro AL, Ehrlich J, Bonnet M, Calnan M, Graham SM, Hermans S, Jarrett A, Lewa R, Mandalakas A, Martinez L, Migliori GB, Ong CWM, Otero L, Rangaka MX, Raviglione MCB, Seaworth B, Ssengooba W, Theron G, Trajman A, and Behr MA
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- Humans, Dictionaries, Medical as Topic, Tuberculosis epidemiology, Tuberculosis prevention & control
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- 2024
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186. Integration of HIV Testing in a Community Intervention for Tuberculosis Screening Among Household Contacts of Patients with Tuberculosis in Cameroon and Uganda.
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Tchakounte Youngui B, Atwine D, Otai D, Vasiliu A, Ssekyanzi B, Sih C, Kana R, Arinaitwe R, Cuer B, Simo L, Okello R, Tchendjou P, Casenghi M, Kuate AK, Turyahabwe S, Cohn J, Bonnet M, and Tchounga BK
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- Adult, Child, Humans, Uganda epidemiology, Cameroon epidemiology, Mass Screening methods, HIV Testing, Contact Tracing methods, HIV Infections diagnosis, HIV Infections epidemiology, HIV Infections complications, Tuberculosis diagnosis, Tuberculosis epidemiology, Tuberculosis prevention & control
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Introduction: People living with HIV are considered at higher risk of developing severe forms of tuberculosis (TB) disease. Providing HIV testing to TB-exposed people is therefore critical. We present the results of integrating HIV testing into a community-based intervention for household TB contact management in Cameroon and Uganda., Methods: Trained community health workers visited the households of index patients with TB identified in 3 urban/semiurban and 6 rural districts or subdistricts as part of a cluster-randomized trial and provided TB screening to all household contacts. Voluntary HIV counseling and testing were offered to contacts aged 5 years or older with unknown HIV status. We describe the cascade of care for HIV testing and the factors associated with the acceptance of HIV testing., Results: Overall, 1983 household contacts aged 5 years or older were screened for TB. Of these contacts, 1652 (83.3%) did not know their HIV status, 1457 (88.2%) accepted HIV testing, and 1439 (98.8%) received testing. HIV testing acceptance was lower among adults than children [adjusted odds ratio (aOR) = 0.35, 95% confidence interval (CI): 0.22 to 0.55], those living in household of an HIV-positive vs HIV-negative index case (aOR = 0.56, 95% CI: 0.38 to 0.83), and contacts requiring a reassessment visit after the initial TB screening visit vs asymptomatic contacts (aOR = 0.20, 95% CI: 0.06 to 0.67) and was higher if living in Uganda vs Cameroon (aOR = 4.54, 95% CI: 1.17 to 17.62) or if another contact of the same index case was tested for HIV (aOR = 9.22, 95% CI: 5.25 to 16.18)., Conclusion: HIV testing can be integrated into community-based household TB contact screening and is well-accepted., Competing Interests: The authors have no funding or conflicts of interest to disclose., (Copyright © 2024 The Author(s). Published by Wolters Kluwer Health, Inc.)
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- 2024
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187. Cost-effectiveness and budget impact of decentralising childhood tuberculosis diagnosis in six high tuberculosis incidence countries: a mathematical modelling study.
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d'Elbée M, Harker M, Mafirakureva N, Nanfuka M, Huyen Ton Nu Nguyet M, Taguebue JV, Moh R, Khosa C, Mustapha A, Mwanga-Amumpere J, Borand L, Nolna SK, Komena E, Cumbe S, Mugisha J, Natukunda N, Mao TE, Wittwer J, Bénard A, Bernard T, Sohn H, Bonnet M, Wobudeya E, Marcy O, and Dodd PJ
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Background: The burden of childhood tuberculosis remains high globally, largely due to under-diagnosis. Decentralising childhood tuberculosis diagnosis services to lower health system levels could improve case detection, but there is little empirically based evidence on cost-effectiveness or budget impact., Methods: In this mathematical modelling study, we assessed the cost-effectiveness and budget impact of decentralising a comprehensive diagnosis package for childhood tuberculosis to district hospitals (DH-focused) or primary health centres (PHC-focused) compared to standard of care (SOC). The project was conducted in Cambodia, Cameroon, Côte d'Ivoire, Mozambique, Sierra Leone, and Uganda between August 1st, 2018 and September 30th, 2021. A mathematical model was developed to assess the health and economic outcomes of the intervention from a health system perspective. Estimated outcomes were tuberculosis cases, deaths, disability-adjusted life years (DALYs) and incremental cost-effectiveness ratios (ICERs). We also calculated the budget impact of nationwide implementation. The TB-Speed Decentralization study is registered with ClinicalTrials.gov, NCT04038632., Findings: For the DH-focused strategy versus SOC, ICERs ranged between $263 (Cambodia) and $342 (Côte d'Ivoire) per DALY averted. For the PHC-focused strategy versus SOC, ICERs ranged between $477 (Cambodia) and $599 (Côte d'Ivoire) per DALY averted. Results were sensitive to TB prevalence and the discount rate used. The additional costs of implementing the DH-focused strategy ranged between $12.8 M (range 10.8-16.4) (Cambodia) and $50.4 M (36.5-74.4) (Mozambique), and between $13.9 M (12.6-15.6) (Sierra Leone) and $134.6 M (127.1-143.0) (Uganda) for the PHC-focused strategy., Interpretation: The DH-focused strategy may be cost-effective in some countries, depending on the cost-effectiveness threshold used for policy making. Either intervention would require substantial early investment., Funding: Unitaid., Competing Interests: MH was paid as a subcontractor by the University of Bordeaux from the Unitaid grant for the TB-Speed programme. MB is employed by the Institut de Recherche pour le Développement (TransVIHMI) who received Unitaid funds in relation to this study. MB is the chair of the board of Epicentre since November 9th, 2022, which was a third party in the TB-Speed project who received funds from Unitaid, but MB did not receive any payment for this activity. PD is subcontracted on the Unitaid grant through the partnership between the University of Bordeaux and the University of Sheffield. All other authors declare no competing interests., (© 2024 The Authors.)
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- 2024
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188. Effect of decentralising childhood tuberculosis diagnosis to primary health centre versus district hospital levels on disease detection in children from six high tuberculosis incidence countries: an operational research, pre-post intervention study.
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Wobudeya E, Nanfuka M, Ton Nu Nguyet MH, Taguebue JV, Moh R, Breton G, Khosa C, Borand L, Mwanga-Amumpaire J, Mustapha A, Nolna SK, Komena E, Mugisha JR, Natukunda N, Dim B, de Lauzanne A, Cumbe S, Balestre E, Poublan J, Lounnas M, Ngu E, Joshi B, Norval PY, Terquiem EL, Turyahabwe S, Foray L, Sidibé S, Albert KK, Manhiça I, Sekadde M, Detjen A, Verkuijl S, Mao TE, Orne-Gliemann J, Bonnet M, and Marcy O
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Background: Childhood tuberculosis (TB) remains underdiagnosed largely because of limited awareness and poor access to all or any of specimen collection, molecular testing, clinical evaluation, and chest radiography at low levels of care. Decentralising childhood TB diagnostics to district hospitals (DH) and primary health centres (PHC) could improve case detection., Methods: We conducted an operational research study using a pre-post intervention cross-sectional study design in 12 DHs and 47 PHCs of 12 districts across Cambodia, Cameroon, Côte d'Ivoire, Mozambique, Sierra Leone and Uganda. The intervention included 1) a comprehensive diagnosis package at patient-level with tuberculosis screening for all sick children and young adolescents <15 years, and clinical evaluation, Xpert Ultra-testing on respiratory and stool samples, and chest radiography for children with presumptive TB, and 2) two decentralisation approaches (PHC-focused or DH-focused) to which districts were randomly allocated at country level. We collected aggregated and individual data. We compared the proportion of tuberculosis detection in children and young adolescents <15 years pre-intervention (01 August 2018-30 November 2019) versus during intervention (07 March 2020-30 September 2021), overall and by decentralisation approach. This study is registered with ClinicalTrials.gov, NCT04038632., Findings: TB was diagnosed in 217/255,512 (0.08%) children and young adolescent <15 years attending care pre-intervention versus 411/179,581 (0.23%) during intervention, (OR: 3.59 [95% CI 1.99-6.46], p-value<0.0001; p-value = 0.055 after correcting for over-dispersion). In DH-focused districts, TB diagnosis was 80/122,570 (0.07%) versus 302/86,186 (0.35%) (OR: 4.07 [1.86-8.90]; p-value = 0.0005; p-value = 0.12 after correcting for over-dispersion); and 137/132,942 (0.10%) versus 109/93,395 (0.11%) in PHC-focused districts, respectively (OR: 2.92 [1.25-6.81; p-value = 0.013; p-value = 0.26 after correcting for over-dispersion)., Interpretation: Decentralising and strengthening childhood TB diagnosis at lower levels of care increases tuberculosis case detection but the difference was not statistically significant., Funding Source: Unitaid, Grant number 2017-15-UBx-TB-SPEED., Competing Interests: All authors declare no competing interests., (© 2024 World Health Organization.)
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- 2024
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189. Association of indicators of extensive disease and rifampin-resistant tuberculosis treatment outcomes: an individual participant data meta-analysis.
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Campbell JR, Brode SK, Barry P, Bastos ML, Bonnet M, Guglielmetti L, Kempker R, Klimuk D, Laniado Laborín R, Milanov V, Singla R, Skrahina A, Trajman A, van der Werf TS, Viiklepp P, and Menzies D
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- Humans, Male, Adult, Female, Rifampin therapeutic use, Sputum, Tuberculosis, Pulmonary drug therapy, Mycobacterium tuberculosis, Tuberculosis, Multidrug-Resistant drug therapy
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Background: Indicators of extensive disease-acid fast bacilli (AFB) smear positivity and lung cavitation-have been inconsistently associated with clinical rifampin-resistant/multidrug-resistant tuberculosis (RR/MDR-TB) outcomes. We evaluated the association of these indicators with end-of-treatment outcomes., Methods: We did an individual participant data meta-analysis of people treated for RR/MDR-TB with longer regimens with documented AFB smear and chest radiography findings. We compared people AFB smear-negative without cavities to people: (1) smear-negative with lung cavities; (2) smear-positive without lung cavities and (3) AFB smear-positive with lung cavities. Using multivariable logistic regression accounting for demographic, treatment and clinical factors, we calculated adjusted ORs (aOR) for any unfavourable outcome (death, lost to follow-up, failure/recurrence), and mortality and treatment failure/recurrence alone., Results: We included 5596 participants; included participants significantly differed from excluded participants. Overall, 774 (13.8%) were AFB smear-negative without cavities, 647 (11.6%) only had cavities, 1424 (25.4%) were AFB smear-positive alone and 2751 (49.2%) were AFB smear-positive with cavities. The median age was 37 years (IQR: 28-47), 3580 (64%) were male and 686 (12.5%) had HIV. Compared with participants AFB smear-negative without cavities, aOR (95% CI) for any unfavourable outcome was 1.0 (0.8 to 1.4) for participants smear-negative with lung cavities, 1.2 (0.9 to 1.5) if smear-positive without cavities and 1.6 (1.3 to 2.0) if AFB smear-positive with lung cavities. Odds were only significantly increased for mortality (1.5, 95% CI 1.1 to 2.1) and failure/recurrence (2.2, 95% CI 1.5 to 3.3) among participants AFB smear-positive with lung cavities., Conclusion: Only the combination of AFB smear-positivity and lung cavitation was associated with unfavourable outcomes, suggesting they may benefit from stronger regimens., Competing Interests: Competing interests: None declared., (© Author(s) (or their employer(s)) 2024. No commercial re-use. See rights and permissions. Published by BMJ.)
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- 2024
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190. Cost-effectiveness of community-based household tuberculosis contact management for children in Cameroon and Uganda: a modelling analysis of a cluster-randomised trial.
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Mafirakureva N, Tchounga BK, Mukherjee S, Tchakounte Youngui B, Ssekyanzi B, Simo L, Okello RF, Turyahabwe S, Kuate Kuate A, Cohn J, Vasiliu A, Casenghi M, Atwine D, Bonnet M, and Dodd PJ
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- Humans, Child, Cost-Benefit Analysis, Uganda epidemiology, Cameroon epidemiology, Family Characteristics, Tuberculosis prevention & control, Tuberculosis diagnosis
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Background: WHO recommends household contact management (HCM) including contact screening and tuberculosis-preventive treatment (TPT) for eligible children. The CONTACT trial found increased TPT initiation and completion rates when community health workers were used for HCM in Cameroon and Uganda., Methods: We did a cost-utility analysis of the CONTACT trial using a health-system perspective to estimate the health impact, health-system costs, and cost-effectiveness of community-based versus facility-based HCM models of care. A decision-analytical modelling approach was used to evaluate the cost-effectiveness of the intervention compared with the standard of care using trial data on cascade of care, intervention effects, and resource use. Health outcomes were based on modelled progression to tuberculosis, mortality, and discounted disability-adjusted life-years (DALYs) averted. Health-care resource use, outcomes, costs (2021 US$), and cost-effectiveness are presented., Findings: For every 1000 index patients diagnosed with tuberculosis, the intervention increased the number of TPT courses by 1110 (95% uncertainty interval 894 to 1227) in Cameroon and by 1078 (796 to 1220) in Uganda compared with the control model. The intervention prevented 15 (-3 to 49) tuberculosis deaths in Cameroon and 10 (-20 to 33) in Uganda. The incremental cost-effectiveness ratio was $620 per DALY averted in Cameroon and $970 per DALY averted in Uganda., Interpretation: Community-based HCM approaches can substantially reduce child tuberculosis deaths and in our case would be considered cost-effective at willingness-to-pay thresholds of $1000 per DALY averted. Their impact and cost-effectiveness are likely to be greatest where baseline HCM coverage is lowest., Funding: Unitaid and UK Medical Research Council., Competing Interests: Declaration of interests MB has received grants (paid to her institution) from Unitaid and Expertise France for the TB-Speed project on childhood tuberculosis diagnosis, from ANRS for a COVID-19 prevalence study in children with presumptive tuberculosis, and from EDCTP-2 for two therapeutic trials for the treatment of adults with tuberculosis meningitis (INTENSE-TBM) and adults with advanced HIV-TB co-infection (DATURA). All other authors declare no competing interests., (Copyright © 2023 The Author(s). Published by Elsevier Ltd. This is an Open Access article under the CC BY 4.0 license. Published by Elsevier Ltd.. All rights reserved.)
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- 2023
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191. Effectiveness of a community-based approach for the investigation and management of children with household tuberculosis contact in Cameroon and Uganda: a cluster-randomised trial.
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Bonnet M, Vasiliu A, Tchounga BK, Cuer B, Fielding K, Ssekyanzi B, Tchakounte Youngui B, Cohn J, Dodd PJ, Tiendrebeogo G, Tchendjou P, Simo L, Okello RF, Kuate Kuate A, Turyahabwe S, Atwine D, Graham SM, and Casenghi M
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- Adolescent, Child, Humans, Cameroon epidemiology, Uganda epidemiology, Child, Preschool, Infant, Newborn, Infant, HIV Infections, Tuberculosis diagnosis, Tuberculosis drug therapy, Tuberculosis prevention & control, Tuberculosis, Pulmonary diagnosis, Tuberculosis, Pulmonary drug therapy, Tuberculosis, Pulmonary prevention & control
- Abstract
Background: Globally, the uptake of tuberculosis-preventive treatment (TPT) among children with household tuberculosis contact remains low, partly due to the necessity of bringing children to health facilities for investigations. This study aimed to evaluate the effect on TPT initiation and completion of community-based approaches to tuberculosis contact investigations in Cameroon and Uganda., Methods: We did a parallel, cluster-randomised, controlled trial across 20 clusters (consisting of 25 district hospitals and primary health centres) in Cameroon and Uganda, which were randomised (1:1) to receive a community-based approach (intervention group) or standard-of-care facility-based approach to contact screening and management (control group). The community-based approach consisted of symptom-based tuberculosis screening of all household contacts by community health workers at the household, with referral of symptomatic contacts to local facilities for investigations. Initiation of TPT (3-month course of rifampicin-isoniazid) was done by a nurse in the household, and home visits for TPT follow-up were done by community health workers. Index patients were people aged 15 years or older with bacteriologically confirmed, drug-susceptible, pulmonary tuberculosis diagnosed less than 1 month before inclusion and who declared at least one child or young adolescent (aged 0-14 years) household contact. The primary endpoint was the proportion of declared child contacts in the TPT target group (those aged <5 years irrespective of HIV status, and children aged 5-14 years living with HIV) who commenced and completed TPT, assessed in the modified intention-to-treat population (excluding enrolled index patients and their contacts who did not fit the eligibility criteria). Descriptive cascade of care assessment and generalised linear mixed modelling were used for comparison. This study is registered with ClinicalTrials.gov (NCT03832023)., Findings: The study included nine clusters in the intervention group (after excluding one cluster that did not enrol any index patients for >2 months) and ten in the control group. Between Oct 14, 2019 and Jan 13, 2022, 2894 child contacts were declared by 899 index patients with bacteriologically confirmed tuberculosis. Among all child contacts declared, 1548 (81·9%) of 1889 in the intervention group and 475 (47·3%) of 1005 in the control group were screened for tuberculosis. 1400 (48·4%) child contacts were considered to be in the TPT target group: 941 (49·8%) of 1889 in the intervention group and 459 (45·7%) of 1005 in the control group. In the TPT target group, TPT was commenced and completed in 752 (79·9%) of 941 child contacts in the intervention group and 283 (61·7%) of 459 in the control group (odds ratio 3·06 [95% CI 1·24-7·53])., Interpretation: A community-based approach using community health workers can significantly increase contact investigation coverage and TPT completion among eligible child contacts in a tuberculosis-endemic setting., Funding: Unitaid., Translation: For the French translation of the abstract see Supplementary Materials section., Competing Interests: Declaration of interests MB has received grants (paid to her institution) from Unitaid and Expertise France for the TB-Speed project on childhood tuberculosis diagnosis, from ANRS for a COVID-19 prevalence study in children with presumptive tuberculosis, and from EDCTP-2 for two therapeutic trials for the treatment of adults with tuberculosis meningitis (INTENSE-TBM) and adults with advanced HIV-TB co-infection (DATURA). All other authors declare no competing interests., (Copyright © 2023 The Author(s). Published by Elsevier Ltd. This is an Open Access article under the CC BY-NC-ND 4.0 license. Published by Elsevier Ltd.. All rights reserved.)
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- 2023
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192. Acceptability of decentralizing childhood tuberculosis diagnosis in low-income countries with high tuberculosis incidence: Experiences and perceptions from health care workers in Sub-Saharan Africa and South-East Asia.
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Joshi B, De Lima YV, Massom DM, Kaing S, Banga MF, Kamara ET, Sesay S, Borand L, Taguebue JV, Moh R, Khosa C, Breton G, Mwanga-Amumpaire J, Bonnet M, Wobudeya E, Marcy O, and Orne-Gliemann J
- Abstract
Decentralizing childhood tuberculosis services, including diagnosis, is now recommended by the WHO and could contribute to increasing tuberculosis detection in high burden countries. However, implementing microbiological tests and clinical evaluation could be challenging for health care workers (HCWs) in Primary Health Centers (PHCs) and even District Hospitals (DHs). We sought to assess the acceptability of decentralizing a comprehensive childhood tuberculosis diagnosis package from HCWs' perspective. We conducted implementation research nested within the TB-Speed Decentralization study. HCWs from two health districts of Cambodia, Cameroon, Côte d'Ivoire, Mozambique, Sierra Leone, and Uganda implemented systematic screening, nasopharyngeal aspirates (NPA) and stool sample collection with molecular testing, clinical evaluation and chest X-ray (CXR) interpretation. We investigated their experiences and perceptions in delivering the diagnostic package components in 2020-21 using individual semi-structured interviews. We conducted thematic analysis, supported by the Theoretical Framework of Acceptability. HCWs (n = 130, 55% female, median age 36 years, 53% nurses, 72% PHC-based) perceived that systematic screening, although increasing workload, was beneficial as it improved childhood tuberculosis awareness. Most HCWs shared satisfaction and confidence in performing NPA, despite procedure duration, need to involve parents/colleagues and discomfort for children. HCWs shared positive attitudes towards stool sample-collection but were frustrated by delayed stool collection associated with cultural practices, transport and distance challenges. Molecular testing, conducted by nurses or laboratory technicians, was perceived as providing quality results, contributing to diagnosis. Clinical evaluation and diagnosis raised self-efficacy issues and need for continuous training and clinical mentoring. HCWs valued CXR, however complained that technical and logistical problems limited access to digital reports. Referral from PHC to DH was experienced as burdensome. HCWs at DH and PHC-levels perceived and experienced decentralized childhood tuberculosis diagnosis as acceptable. Implementation however could be hampered by feasibility issues, and calls for innovative referral mechanisms for patients, samples and CXR., Competing Interests: The authors have declared that no competing interests exist., (Copyright: © 2023 Joshi et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
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- 2023
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193. Four-Month High-Dose Rifampicin Regimens for Pulmonary Tuberculosis.
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Jindani A, Atwine D, Grint D, Bah B, Adams J, Ticona ER, Shrestha B, Agizew T, Hamid S, Jamil B, Byamukama A, Kananura K, Mugisha Taremwa I, Bonnet M, Camara LM, Bah-Sow OY, Bah KS, Bah NM, Sow M, Ticona Huaroto CE, Mugruza Pineda R, Tandukar B, Raya BB, Shrestha N, Mathoma A, Mathebula-Modongo UP, Basotli J, Irfan M, Begum D, Muzammil A, Ahmed I, Hasan R, Burgos MV, Sultan F, Hassan M, Masood I, Robb C, Decker J, Grubnic S, Butcher PD, Witney A, Dhillon J, Munshi T, Fielding K, and Harrison TS
- Subjects
- Humans, Antitubercular Agents adverse effects, Isoniazid therapeutic use, Drug Therapy, Combination, Rifampin adverse effects, Tuberculosis, Pulmonary chemically induced
- Abstract
BACKGROUND: Shorter but effective tuberculosis treatment regimens would be of value to the tuberculosis treatment community. High-dose rifampicin has been associated with more rapid and secure lung sterilization and may enable shorter tuberculosis treatment regimens. METHODS: We randomly assigned adults who were given a diagnosis of rifampicin-susceptible pulmonary tuberculosis to a 6-month control regimen, a similar 4-month regimen of rifampicin at 1200 mg/d (study regimen 1 [SR1]), or a 4-month regimen of rifampicin at 1800 mg/d (study regimen 2 [SR2]). Sputum specimens were collected at regular intervals. The primary end point was a composite of treatment failure and relapse in participants who were sputum smear positive at baseline. The noninferiority margin was 8 percentage points. Using a sequence of ordered hypotheses, noninferiority of SR2 was tested first. RESULTS: Between January 2017 and December 2020, 672 patients were enrolled in six countries, including 191 in the control group, 192 in the SR1 group, and 195 in the SR2 group. Noninferiority was not shown. Favorable responses rates were 93, 90, and 87% in the control, SR1, and SR2 groups, respectively, for a country-adjusted absolute risk difference of 6.3 percentage points (90% confidence interval, 1.1 to 11.5) comparing SR2 with the control group. The proportions of participants experiencing a grade 3 or 4 adverse event were 4.0, 4.5, and 4.4% in the control, SR1, and SR2 groups, respectively. CONCLUSIONS: Four-month high-dose rifampicin regimens did not have dose-limiting toxicities or side effects but failed to meet noninferiority criteria compared with the standard 6-month control regimen for treatment of pulmonary tuberculosis. (Funded by the MRC/Wellcome Trust/DFID Joint Global Health Trials Scheme; ClinicalTrials.gov number, NCT02581527.)
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- 2023
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194. High Performance of Systematic Combined Urine Liboarabinomannan Test and Sputum Xpert MTB/RIF for Tuberculosis Screening in Severely Immunosuppressed Ambulatory Adults With Human Immunodeficiency Virus.
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Bonnet M, Gabillard D, Domoua S, Muzoora C, Messou E, Sovannarith S, Nguyen DB, Badje A, Juchet S, Bunnet D, Borand L, Natukunda N, Tran TH, Anglaret X, Laureillard D, and Blanc FX
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- Humans, Male, Adult, Female, Mycobacterium tuberculosis, Middle Aged, CD4 Lymphocyte Count, Mass Screening methods, HIV Infections complications, Sputum microbiology, Lipopolysaccharides urine, Immunocompromised Host, Tuberculosis diagnosis, Tuberculosis urine
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Background: In people with human immunodeficiency virus (PWH), the World Health Organization-recommended tuberculosis (TB) 4-symptom screen (W4SS) targeting those who need molecular rapid testing may be suboptimal. We assessed the performance of different TB screening approaches in severely immunosuppressed PWH enrolled in the guided-treatment group of the STATIS trial (NCT02057796)., Methods: Ambulatory PWH with no overt evidence of TB and CD4 count <100 cells/µL were screened for TB prior to antiretroviral therapy (ART) initiation with W4SS, chest radiograph (CXR), urine lipoarabinomannan (LAM) test, and sputum Xpert MTB/RIF (Xpert). Correctly and wrongly identified cases by screening approaches were assessed overall and by CD4 count threshold (≤50 and 51-99 cells/µL)., Results: Of 525 enrolled participants (median CD4 count, 28 cells/µL), 48 (9.9%) were diagnosed with TB at enrollment. Among participants with a negative W4SS, 16% had either a positive Xpert, a CXR suggestive of TB, or a positive urine LAM test. The combination of sputum Xpert and urine LAM test was associated with the highest proportion of participants correctly identified as TB (95.8%) and non-TB cases (95.4%), with proportions equally high among participants with CD4 counts above or below 50 cells/µL. Restricting the use of sputum Xpert, urine LAM test, or CXR to participants with a positive W4SS reduced the proportion of wrongly and correctly identified cases., Conclusions: There is a clear benefit to perform both sputum Xpert and urine LAM tests as TB screening in all severely immunosuppressed PWH prior to ART initiation, not only in those with a positive W4SS. Clinical Trials Registration. NCT02057796., Competing Interests: Potential conflicts of interest. The authors: No reported conflicts of interest. All authors have submitted the ICMJE Form for Disclosure of Potential Conflicts of Interest., (© The Author(s) 2023. Published by Oxford University Press on behalf of Infectious Diseases Society of America. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.)
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- 2023
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195. Development of treatment-decision algorithms for children evaluated for pulmonary tuberculosis: an individual participant data meta-analysis.
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Gunasekera KS, Marcy O, Muñoz J, Lopez-Varela E, Sekadde MP, Franke MF, Bonnet M, Ahmed S, Amanullah F, Anwar A, Augusto O, Aurilio RB, Banu S, Batool I, Brands A, Cain KP, Carratalá-Castro L, Caws M, Click ES, Cranmer LM, García-Basteiro AL, Hesseling AC, Huynh J, Kabir S, Lecca L, Mandalakas A, Mavhunga F, Myint AA, Myo K, Nampijja D, Nicol MP, Orikiriza P, Palmer M, Sant'Anna CC, Siddiqui SA, Smith JP, Song R, Thuong Thuong NT, Ung V, van der Zalm MM, Verkuijl S, Viney K, Walters EG, Warren JL, Zar HJ, Marais BJ, Graham SM, Debray TPA, Cohen T, and Seddon JA
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- United States, Adolescent, Humans, Child, Retrospective Studies, Triage, Algorithms, Tuberculosis, Pulmonary diagnosis, Tuberculosis, Pulmonary drug therapy, Tuberculosis, Pulmonary epidemiology, Tuberculosis
- Abstract
Background: Many children with pulmonary tuberculosis remain undiagnosed and untreated with related high morbidity and mortality. Recent advances in childhood tuberculosis algorithm development have incorporated prediction modelling, but studies so far have been small and localised, with limited generalisability. We aimed to evaluate the performance of currently used diagnostic algorithms and to use prediction modelling to develop evidence-based algorithms to assist in tuberculosis treatment decision making for children presenting to primary health-care centres., Methods: For this meta-analysis, we identified individual participant data from a WHO public call for data on the management of tuberculosis in children and adolescents and referral from childhood tuberculosis experts. We included studies that prospectively recruited consecutive participants younger than 10 years attending health-care centres in countries with a high tuberculosis incidence for clinical evaluation of pulmonary tuberculosis. We collated individual participant data including clinical, bacteriological, and radiological information and a standardised reference classification of pulmonary tuberculosis. Using this dataset, we first retrospectively evaluated the performance of several existing treatment-decision algorithms. We then used the data to develop two multivariable prediction models that included features used in clinical evaluation of pulmonary tuberculosis-one with chest x-ray features and one without-and we investigated each model's generalisability using internal-external cross-validation. The parameter coefficient estimates of the two models were scaled into two scoring systems to classify tuberculosis with a prespecified sensitivity target. The two scoring systems were used to develop two pragmatic, treatment-decision algorithms for use in primary health-care settings., Findings: Of 4718 children from 13 studies from 12 countries, 1811 (38·4%) were classified as having pulmonary tuberculosis: 541 (29·9%) bacteriologically confirmed and 1270 (70·1%) unconfirmed. Existing treatment-decision algorithms had highly variable diagnostic performance. The scoring system derived from the prediction model that included clinical features and features from chest x-ray had a combined sensitivity of 0·86 [95% CI 0·68-0·94] and specificity of 0·37 [0·15-0·66] against a composite reference standard. The scoring system derived from the model that included only clinical features had a combined sensitivity of 0·84 [95% CI 0·66-0·93] and specificity of 0·30 [0·13-0·56] against a composite reference standard. The scoring system from each model was placed after triage steps, including assessment of illness acuity and risk of poor tuberculosis-related outcomes, to develop treatment-decision algorithms., Interpretation: We adopted an evidence-based approach to develop pragmatic algorithms to guide tuberculosis treatment decisions in children, irrespective of the resources locally available. This approach will empower health workers in primary health-care settings with high tuberculosis incidence and limited resources to initiate tuberculosis treatment in children to improve access to care and reduce tuberculosis-related mortality. These algorithms have been included in the operational handbook accompanying the latest WHO guidelines on the management of tuberculosis in children and adolescents. Future prospective evaluation of algorithms, including those developed in this work, is necessary to investigate clinical performance., Funding: WHO, US National Institutes of Health., Competing Interests: Declaration of interests We declare no competing interests., (© 2023 World Health Organization. Published by Elsevier Ltd. All rights reserved. This is an Open Access article published under the CC BY 3.0 IGO license which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. In any use of this article, there should be no suggestion that WHO endorses any specific organisation, products or services. The use of the WHO logo is not permitted. This notice should be preserved along with the article's original URL.)
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- 2023
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196. Mortality and Cause of Death in Children With Presumptive Disseminated Tuberculosis.
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Bonnet M, Nordholm AC, Ssekyanzi B, Byamukama O, Orikiriza P, Tusabe T, Nyehangane D, Taremwa IM, Turyashemererwa E, Wobudeya E, Mwanga-Amumpaire J, Marais BJ, and Nampijja D
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- Humans, Child, Aged, Prospective Studies, Cause of Death, Risk Factors, HIV Infections complications, Tuberculosis complications, Tuberculosis diagnosis
- Abstract
Background and Objectives: Children experience high tuberculosis (TB)-related mortality but causes of death among those with presumptive TB are poorly documented. We describe the mortality, likely causes of death, and associated risk factors among vulnerable children admitted with presumptive TB in rural Uganda., Methods: We conducted a prospective study of vulnerable children, defined as <2 years of age, HIV-positive, or severely malnourished, with a clinical suspicion of TB. Children were assessed for TB and followed for 24 weeks. TB classification and likely cause of death were assessed by an expert endpoint review committee, including insight gained from minimally invasive autopsies, when possible., Results: Of the 219 children included, 157 (71.7%) were <2 years of age, 72 (32.9%) were HIV-positive, and 184 (84.0%) were severely malnourished. Seventy-one (32.4%) were classified as "likely tuberculosis" (15 confirmed and 56 unconfirmed), and 72 (32.9%) died. The median time to death was 12 days. The most frequent causes of death, ascertained for 59 children (81.9%), including 23 cases with autopsy results, were severe pneumonia excluding confirmed TB (23.7%), hypovolemic shock due to diarrhea (20.3%), cardiac failure (13.6%), severe sepsis (13.6%), and confirmed TB (10.2%). Mortality risk factors were confirmed TB (adjusted hazard ratio [aHR] = 2.84 [95% confidence interval (CI): 1.19-6.77]), being HIV-positive (aHR = 2.45 [95% CI: 1.37-4.38]), and severe clinical state on admission (aHR = 2.45 [95% CI: 1.29-4.66])., Conclusions: Vulnerable children hospitalized with presumptive TB experienced high mortality. A better understanding of the likely causes of death in this group is important to guide empirical management., (Copyright © 2023 by the American Academy of Pediatrics.)
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- 2023
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197. Lots of considerations when evaluating the FujiLAM assay - Author's reply.
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Huerga H, Gupta-Wright A, Muyindike W, Hewison C, Casenghi M, and Bonnet M
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Competing Interests: We declare no competing interests.
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- 2023
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198. Effect of systematic tuberculosis detection on mortality in young children with severe pneumonia in countries with high incidence of tuberculosis: a stepped-wedge cluster-randomised trial.
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Marcy O, Wobudeya E, Font H, Vessière A, Chabala C, Khosa C, Taguebue JV, Moh R, Mwanga-Amumpaire J, Lounnas M, Mulenga V, Mavale S, Chilundo J, Rego D, Nduna B, Shankalala P, Chirwa U, De Lauzanne A, Dim B, Tiogouo Ngouana E, Folquet Amorrissani M, Cisse L, Amon Tanoh Dick F, Komena EA, Kwedi Nolna S, Businge G, Natukunda N, Cumbe S, Mbekeka P, Kim A, Kheang C, Pol S, Maleche-Obimbo E, Seddon JA, Mao TE, Graham SM, Delacourt C, Borand L, and Bonnet M
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- Humans, Child, Child, Preschool, Incidence, Sensitivity and Specificity, Sputum microbiology, Mycobacterium tuberculosis, Tuberculosis diagnosis
- Abstract
Background: Tuberculosis diagnosis might be delayed or missed in children with severe pneumonia because this diagnosis is usually only considered in cases of prolonged symptoms or antibiotic failure. Systematic tuberculosis detection at hospital admission could increase case detection and reduce mortality., Methods: We did a stepped-wedge cluster-randomised trial in 16 hospitals from six countries (Cambodia, Cameroon, Côte d'Ivoire, Mozambique, Uganda, and Zambia) with high incidence of tuberculosis. Children younger than 5 years with WHO-defined severe pneumonia received either the standard of care (control group) or standard of care plus Xpert MTB/RIF Ultra (Xpert Ultra; Cepheid, Sunnyvale, CA, USA) on nasopharyngeal aspirate and stool samples (intervention group). Clusters (hospitals) were progressively switched from control to intervention at 5-week intervals, using a computer-generated random sequence, stratified on incidence rate of tuberculosis at country level, and masked to teams until 5 weeks before switch. We assessed the effect of the intervention on primary (12-week all-cause mortality) and secondary (including tuberculosis diagnosis) outcomes, using generalised linear mixed models. The primary analysis was by intention to treat. We described outcomes in children with severe acute malnutrition in a post hoc analysis. This study is registered with ClinicalTrials.gov (NCT03831906) and the Pan African Clinical Trial Registry (PACTR202101615120643)., Findings: From March 21, 2019, to March 30, 2021, we enrolled 1401 children in the control group and 1169 children in the intervention group. In the intervention group, 1140 (97·5%) children had nasopharyngeal aspirates and 942 (80·6%) had their stool collected; 24 (2·1%) had positive Xpert Ultra. At 12 weeks, 110 (7·9%) children in the control group and 91 (7·8%) children in the intervention group had died (adjusted odds ratio [OR] 0·986, 95% CI 0·597-1·630, p=0·957), and 74 (5·3%) children in the control group and 88 (7·5%) children in the intervention group had tuberculosis diagnosed (adjusted OR 1·238, 95% CI 0·696-2·202, p=0·467). In children with severe acute malnutrition, 57 (23·8%) of 240 children in the control group and 53 (17·8%) of 297 children in the intervention group died, and 36 (15·0%) of 240 children in the control group and 56 (18·9%) of 297 children in the intervention group were diagnosed with tuberculosis. The main adverse events associated with nasopharyngeal aspirates were samples with blood in 312 (27·3%) of 1147 children with nasopharyngeal aspirates attempted, dyspnoea or SpO
2 less than 95% in 134 (11·4%) of children, and transient respiratory distress or SpO2 less than 90% in 59 (5·2%) children. There was no serious adverse event related to nasopharyngeal aspirates reported during the trial., Interpretation: Systematic molecular tuberculosis detection at hospital admission did not reduce mortality in children with severe pneumonia. High treatment and microbiological confirmation rates support more systematic use of Xpert Ultra in this group, notably in children with severe acute malnutrition., Funding: Unitaid and L'Initiative., Translation: For the French translation of the abstract see Supplementary Materials section., Competing Interests: Declaration of interests We declare no competing interests., (Copyright © 2023 Elsevier Ltd. All rights reserved.)- Published
- 2023
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199. Management of Tuberculosis Infection: Current Situation, Recent Developments and Operational Challenges.
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Agbota G, Bonnet M, and Lienhardt C
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Tuberculosis infection (TBI) is defined as a state of infection in which individuals host live Mycobacterium tuberculosis with or without clinical signs of active TB. It is now understood as a dynamic process covering a spectrum of responses to infection resulting from the interaction between the TB bacilli and the host immune system. The global burden of TBI is about one-quarter of the world's population, representing a reservoir of approximately 2 billion people. On average, 5-10% of people who are infected will develop TB disease over the course of their lives, but this risk is enhanced in a series of conditions, such as co-infection with HIV. The End-TB strategy promotes the programmatic management of TBI as a crucial endeavor to achieving global targets to end the TB epidemic. The current development of new diagnostic tests capable of discriminating between simple TBI and active TB, combined with novel short-course preventive treatments, will help achieve this goal. In this paper, we present the current situation and recent developments of management of TBI and the operational challenges.
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- 2023
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200. Novel FujiLAM assay to detect tuberculosis in HIV-positive ambulatory patients in four African countries: a diagnostic accuracy study.
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Huerga H, Bastard M, Lubega AV, Akinyi M, Antabak NT, Ohler L, Muyindike W, Taremwa IM, Stewart R, Bossard C, Nkosi N, Ndlovu Z, Hewison C, Stavia T, Okomo G, Ogoro JO, Ngozo J, Mbatha M, Aleny C, Wanjala S, Musoke M, Atwine D, Ascorra A, Ardizzoni E, Casenghi M, Ferlazzo G, Nakiyingi L, Gupta-Wright A, and Bonnet M
- Subjects
- Humans, Female, Male, CD4 Lymphocyte Count, Sensitivity and Specificity, Lipopolysaccharides urine, African People, South Africa, Tuberculosis diagnosis, Tuberculosis urine, Mycobacterium tuberculosis, HIV Infections complications, HIV Infections diagnosis
- Abstract
Background: Development of rapid biomarker-based tests that can diagnose tuberculosis using non-sputum samples is a priority for tuberculosis control. We aimed to compare the diagnostic accuracy of the novel Fujifilm SILVAMP TB LAM (FujiLAM) assay with the WHO-recommended Alere Determine TB-LAM Ag test (AlereLAM) using urine samples from HIV-positive patients., Methods: We did a diagnostic accuracy study at five outpatient public health facilities in Uganda, Kenya, Mozambique, and South Africa. Eligible patients were ambulatory HIV-positive individuals (aged ≥15 years) with symptoms of tuberculosis irrespective of their CD4 T-cell count (group 1), and asymptomatic patients with advanced HIV disease (CD4 count <200 cells per μL, or HIV clinical stage 3 or 4; group 2). All participants underwent clinical examination, chest x-ray, and blood sampling, and were requested to provide a fresh urine sample, and two sputum samples. FujiLAM and AlereLAM urine assays, Xpert MTB/RIF Ultra assay on sputum or urine, sputum culture for Mycobacterium tuberculosis, and CD4 count were systematically carried out for all patients. Sensitivity and specificity of FujiLAM and AlereLAM were evaluated against microbiological and composite reference standards., Findings: Between Aug 24, 2020 and Sept 21, 2021, 1575 patients (823 [52·3%] women) were included in the study: 1031 patients in group 1 and 544 patients in group 2. Tuberculosis was microbiologically confirmed in 96 (9·4%) of 1022 patients in group 1 and 18 (3·3%) of 542 patients in group 2. Using the microbiological reference standard, FujiLAM sensitivity was 60% (95% CI 51-69) and AlereLAM sensitivity was 40% (31-49; p<0·001). Among patients with CD4 counts of less than 200 cells per μL, FujiLAM sensitivity was 69% (57-79) and AlereLAM sensitivity was 52% (40-64; p=0·0218). Among patients with CD4 counts of 200 cells per μL or higher, FujiLAM sensitivity was 47% (34-61) and AlereLAM sensitivity was 24% (14-38; p=0·0116). Using the microbiological reference standard, FujiLAM specificity was 87% (95% CI 85-89) and AlereLAM specificity was 86% (95 CI 84-88; p=0·941). FujiLAM sensitivity varied by lot number from 48% (34-62) to 76% (57-89) and specificity from 77% (72-81) to 98% (93-99)., Interpretation: Next-generation, higher sensitivity urine-lipoarabinomannan assays are potentially promising tests that allow rapid tuberculosis diagnosis at the point of care for HIV-positive patients. However, the variability in accuracy between FujiLAM lot numbers needs to be addressed before clinical use., Funding: ANRS and Médecins Sans Frontières., Competing Interests: Declaration of interests We declare no competing interests., (Copyright © 2023 The Author(s). Published by Elsevier Ltd. This is an Open Access article under the CC BY-NC-ND 4.0 license. Published by Elsevier Ltd.. All rights reserved.)
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- 2023
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