1,148 results on '"Amine M"'
Search Results
152. Supercoherent States and Geometric Quantization of a Super Kähler Supermanifold
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El Gradechi, Amine M., Antoine, J-P., editor, Ali, S. Twareque, editor, Lisiecki, W., editor, Mladenov, I. M., editor, and Odzijewicz, A., editor
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- 1994
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153. Analyse de la réponse de l’offre agrégée face à la volatilité des prix des produits agricoles en Algérie : Cas de la filière pomme de terre
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Benmehaia, Amine M. and Oulmane, Amine
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Réponse de l'offre agrégée, prix agricoles, modèle de correction d'erreurs, pommes de terre, Algérie - Abstract
Cet article examine empiriquement la réponse de l'offre agrégée des producteurs de pomme de terre au cours de la période 1966-2018. Nous allons donc (i) vérifier l’existence d’une relation d'équilibre à long terme entre l’offre agricole et les prix des produits agricoles, et (ii) analyser la réactivité de l'offre de ce produit face à des incitations économiques (changement des prix). Pour ce faire, l'analyse de cointégration et le modèle de correction d'erreurs sont utilisés. À long terme, les résultats montrent des élasticités, statistiquement significatives et généralement faibles, entre la surface cultivée et le prix à la production de la pomme terre. Par ailleurs, les élasticités à court terme sont encore plus faibles. Les résultats du modèle de correction d'erreurs ont confirmé une relative réactivité positive aux prix, avec des vitesses d'ajustement lentes surtout dans la dernière décennie. Ce résultat indique que la production de pomme de terre est aussi influencée par d’autres facteurs que le prix. La relative nonpertinence de la réponse d'offre présumée pour la production de pomme de terre, après l’instauration de dispositif Syrpalac, suggère qu’une attention particulière doit être vouée à cette filière afin de contrôler les facteurs qui influent sur la production. English Title: Analysis of aggregate supply response to agricultural prices volatily in Algeria: Case of potato sector This article examines empirically the aggregate supply response of potato growers over the period 1966-2018. We will therefore (i) verify the existence of a long-term equilibrium relationship between agricultural supply and agricultural commodity prices, and (ii) to analyze the responsiveness of the product's supply in the face of economic incentives (price changes). In doing this, cointegration analysis and error correction model will be used. In the long term, the results show statistically significant and generally low elasticities between the agricultural output and the producers’ price of potatoes. Besides, short-term elasticities are even lower. The results of the error correction model confirmed a positive relative reactivity to prices with slow adjustment speeds especially in the last decade. This result indicates that potato production is also influenced by factors other than price. The irrelevance of the presumed supply response for potato production after establishing the Syrpalac dispositive suggests that special attention must be paid to this sector in order to control the factors that influence production.  
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- 2021
154. Inter-Kingdom Signaling of Stress Hormones: Sensing, Transport and Modulation of Bacterial Physiology
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Mohamed Zommiti, Rikki Knowlton, Ouiza Mesguida, Mélyssa Cambronel, Marc G. J. Feuilloley, Sophie Rodrigues, Nathalie Connil, Amine M. Boukerb, Laboratoire de Biotechnologie et Chimie Marine (LBCM), Laboratoire de Biotechnologie et Chimie Marines (LBCM), Université de Bretagne Sud (UBS)-Université de Brest (UBO)-Institut Universitaire Européen de la Mer (IUEM), Institut de Recherche pour le Développement (IRD)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Brest (UBO)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-Université de Bretagne Sud (UBS)-Université de Brest (UBO)-Institut Universitaire Européen de la Mer (IUEM), and Institut de Recherche pour le Développement (IRD)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Brest (UBO)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)
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Microbiology (medical) ,[SDV]Life Sciences [q-bio] ,Virulence ,Physiology ,Review ,medicine.disease_cause ,Microbiology ,03 medical and health sciences ,Immune system ,stress hormones ,medicine ,Escherichia coli ,sensing ,030304 developmental biology ,0303 health sciences ,biology ,030306 microbiology ,Biofilm ,biology.organism_classification ,Vibrio ,QR1-502 ,bacterial physiology ,Salmonella enterica ,transport ,catecholamines ,Bacteria ,Hormone - Abstract
Prokaryotes and eukaryotes have coexisted for millions of years. The hormonal communication between microorganisms and their hosts, dubbed inter-kingdom signaling, is a recent field of research. Eukaryotic signals such as hormones, neurotransmitters or immune system molecules have been shown to modulate bacterial physiology. Among them, catecholamines hormones epinephrine/norepinephrine, released during stress and physical effort, or used therapeutically as inotropes have been described to affect bacterial behaviors (i.e., motility, biofilm formation, virulence) of various Gram-negative bacteria (e.g., Escherichia coli, Salmonella enterica serovar Typhimurium, Pseudomonas aeruginosa, Vibrio sp.). More recently, these molecules were also shown to influence the physiology of some Gram-positive bacteria like Enterococcus faecalis. In E. coli and S. enterica, the stress-associated mammalian hormones epinephrine and norepinephrine trigger a signaling cascade by interacting with the QseC histidine sensor kinase protein. No catecholamine sensors have been well described yet in other bacteria. This review aims to provide an up to date report on catecholamine sensors in eukaryotes and prokaryotes, their transport, and known effects on bacteria.
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- 2021
155. Enterococcus spp.: Is It a Bad Choice for a Good Use—A Conundrum to Solve?
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Najoua Karray-Bouraoui, Amine M. Boukerb, Marc G. J. Feuilloley, Mounir Ferchichi, Mohamed Zommiti, Sylvie Chevalier, Nathalie Connil, and Khaled Sebei
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Microbiology (medical) ,safety ,enterococcus ,Food industry ,medicine.drug_class ,QH301-705.5 ,Antibiotics ,Virulence ,Review ,legislation ,Microbiology ,Functional food ,Virology ,Flora (microbiology) ,Generally recognized as safe ,medicine ,Biology (General) ,biology ,business.industry ,biology.organism_classification ,Antimicrobial ,Biotechnology ,lactic acid bacteria ,virulence ,Enterococcus ,probiotics ,business - Abstract
Since antiquity, the ubiquitous lactic acid bacteria (LAB) Enterococci, which are just as predominant in both human and animal intestinal commensal flora, have been used (and still are) as probiotics in food and feed production. Their qualities encounter several hurdles, particularly in terms of the array of virulence determinants, reflecting a notorious reputation that nearly prevents their use as probiotics. Additionally, representatives of the Enterococcus spp. genus showed intrinsic resistance to several antimicrobial agents, and flexibility to acquire resistance determinants encoded on a broad array of conjugative plasmids, transposons, and bacteriophages. The presence of such pathogenic aspects among some species represents a critical barrier compromising their use as probiotics in food. Thus, the genus neither has Generally Recognized as Safe (GRAS) status nor has it been included in the Qualified Presumption of Safety (QPS) list implying drastic legislation towards these microorganisms. To date, the knowledge of the virulence factors and the genetic structure of foodborne enterococcal strains is rather limited. Although enterococcal infections originating from food have never been reported, the consumption of food carrying virulence enterococci seems to be a risky path of transfer, and hence, it renders them poor choices as probiotics. Auspiciously, enterococcal virulence factors seem to be strain specific suggesting that clinical isolates carry much more determinants that food isolates. The latter remain widely susceptible to clinically relevant antibiotics and subsequently, have a lower potential for pathogenicity. In terms of the ideal enterococcal candidate, selected strains deemed for use in foods should not possess any virulence genes and should be susceptible to clinically relevant antibiotics. Overall, implementation of an appropriate risk/benefit analysis, in addition to the case-by-case assessment, the establishment of a strain’s innocuity, and consideration for relevant guidelines, legislation, and regulatory aspects surrounding functional food development seem to be the crucial elements for industries, health-staff and consumers to accept enterococci, like other LAB, as important candidates for useful and beneficial applications in food industry and food biotechnology. The present review aims at shedding light on the world of hurdles and limitations that hampers the Enterococcus spp. genus and its representatives from being used or proposed for use as probiotics. The future of enterococci use as probiotics and legislation in this field are also discussed.
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- 2021
156. Case report of a successful conservative surgical treatment of a giant liposarcoma of the forearm invading the median nerve
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Jamal Karbal, Amine Machmachi, Walid Bouziane, Moncef Amahtil, Ousmane Laye Diene, and Abdelkrim Daoudi
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Differentiated liposarcoma ,Lipoma-like ,Resection ,Forearm ,Medical physics. Medical radiology. Nuclear medicine ,R895-920 - Abstract
Liposarcomas (LPS) are the most common malignant tumors among soft tissue sarcomas. We report a rare case of well-differentiated liposarcoma (lipoma-like) located along the anterior compartment of the right forearm, which was successfully treated with complete excision, resulting in good functional recovery without recurrence during a 2-year follow-up. Surgery is the primary treatment for localized forms, involving complete and radical excision with clear resection margins. LPS represents a heterogeneous group of soft tissue sarcomas, with diagnosis primarily relying on histological examination. Their care requires a multidisciplinary approach.
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- 2024
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157. Analysis of Primary and Secondary Metabolites, Physical Properties, Antioxidant and Antidiabetic Activities, and Chemical Composition of Rosmarinus officinalis Essential Oils under Differential Water Stress Conditions
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Abdelouahid Laftouhi, Mohamed Adil Mahraz, Anouar Hmamou, Amine Assouguem, Riaz Ullah, Ahmed Bari, Rachid Lahlali, Sezai Ercisli, Sawinder Kaur, Amine Mounadi Idrissi, Noureddine Eloutassi, Zakia Rais, Abdslam Taleb, and Mustapha Taleb
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Chemistry ,QD1-999 - Published
- 2024
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158. Geographical Origin and Solvent Type Impact on Inula Viscosa (L.) Aiton Grown in El Menzel, Morocco – Insights into Bioactivity and Applications
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Sara Tlemcani, Faiçal El Ouadrhiri, Anouar Hmamou, Amal Lahkimi, Hanane Touijer, Mohammed Kara, Amine Mounadi Idrissi, and Hicham Bekkari
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antioxidant activity ,antimicrobial activity ,inula viscosa ,photochemical composition ,Ecology ,QH540-549.5 - Abstract
Geographical origin and environmental factors have a significant impact on the constituents and the biological properties of medicinal and aromatic plants. Herein, we investigated the Inula viscosa plant grown in El Menzel - Morocco, with a focus on the impact of geographical pronvince and solvent type on the mass yield and the biological activities of plant extracts. Chemical composition was characterized by gas chromatography/mass spectrometry (GC/MS). Antimicrobial activity was determined using the disk diffusion method and the microdilution test against eight clinical fungal, Gram-positive and Gram-negative bacterial isolates. Chemical composition results showed that the plant has good nutritional quality in terms of protein, carbohydrates, lipids and dietary fibre. In fact, alkaloids and saponisides are the most predominant chemical compounds in Inula Vuscosa. Meanwhile, eighty volatile compounds were identified, representing 95% of the total essential oil content, the main component of which is tetra-pentacontane (11.26%). Furthermore, results showed high antioxidant activity, with efficacy increasing in the order: Essential Oil > Chloroform extract > Ethereal extract > Ethanolic extract. In addition, both chloroformic extract and essential oil demonstrated significant antibacterial activity against all strains tested. This study highlights the influence of geographical variations and extraction solvents on the bioactivity of Inula viscosa, offering insights into its potential applications in pharmacology and nutraceuticals.
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- 2024
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159. Cameron Browne: Evolutionary game design, Springer briefs in computer science series - Springer 2011, ISBN: 978-1-4471-2178-7.
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Amine M. Boumaza
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- 2012
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160. Analysis of Eddy Currents Induced by Transverse and Longitudinal Gradient Coils in Different Tungsten Collimators Geometries for SPECT/MRI Integration
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Samoudi, Amine M., Van Audenhaege, Karen, Vermeeren, Günter, Poole, Michael, Tanghe, Emmeric, Martens, Luc, Van Holen, Roel, and Joseph, Wout
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- 2015
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161. Dynamic flies: a new pattern recognition tool applied to stereo sequence processing.
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Jean Louchet, Maud Guyon, Marie-Jeanne Lesot, and Amine M. Boumaza
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- 2002
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162. Caractéristiques des enfants ayant une épilepsie suivis au CHU de Marrakech
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Bourrous, M., Elibrahimi, I., Draiss, G., Safini, F., Amine, M., and Bouskraoui, M.
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- 2010
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163. Les sondes double J négligées : les facteurs prédictifs d’incrustation. À propos de 52 cas
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Agnaou, A., Mouslim, O., Ait Ouali, R., Mohamed Amine, M., Dahami, Z., Lakmichi, M., and Sarf, I.
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- 2023
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164. Toward an Alignment-Free Method for Feature Extraction and Accurate Classification of Viral Sequences
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Amine M. Remita, Dylan Lebatteux, and Abdoulaye Baniré Diallo
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0303 health sciences ,Computer science ,Feature extraction ,Genome, Viral ,Genomics ,Sequence Analysis, DNA ,Computational biology ,03 medical and health sciences ,Computational Mathematics ,0302 clinical medicine ,Computational Theory and Mathematics ,030220 oncology & carcinogenesis ,Modeling and Simulation ,Viruses ,Genetics ,Humans ,Sequence Alignment ,Molecular Biology ,Functional genomics ,Algorithms ,030304 developmental biology - Abstract
The classification of pathogens in emerging and re-emerging viruses represents major interests in taxonomic studies, functional genomics, host–pathogen interplay, prevention, and disease t...
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- 2019
165. Statistical assessment of rainfall variability and trends in northeastern Algeria
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Ali Tahar, Noureddine Merniz, and Amine M. Benmehaia
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Mann-Kendall test ,lcsh:TC401-506 ,Environmental Engineering ,Geography, Planning and Development ,education ,lcsh:River, lake, and water-supply engineering (General) ,Development ,precipitation ,Agricultural and Biological Sciences (miscellaneous) ,northeastern Algeria ,climate change ,rainfall trend ,Environmental science ,Physical geography ,Water Science and Technology - Abstract
In the present study, time series for annual, monthly rainfall and number of rainy days per year were analysed to quantify spatial variability and temporal trends for 22 rainfall stations distributed in northeastern Algeria for the period 1978–2010. The Mann–Kendall test and the Sen’s slope estimator were applied to assess the significance and magnitude of the trend. The results showed that precipitation decreases spatially from North to South and from East to West. The application of the Mann–Kendall test (for 0.05% threshold) to the time series data showed that for annual precipitation, no station showed statistically significant trends, unlike the number of rainy days, where there was a significant negative trend in four stations (Jijel, Constantine, Oum El Bouaghi and Tébessa). For the monthly time series, significant positive trends were observed during the months of September in the coastal stations and July for the plateaus and southern Saharan Atlas stations, while significant negative trends were recorded during the months of February and March for the stations of the extreme East in the study area. These results revealed that for the period analysed, there was no significant climate change in northeastern Algeria but there is a seasonal delay having important agroecological implications.
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- 2019
166. In vivo target validation using gene invalidation, RNA interference and protein functional knockout models: it is the time to combine
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Vidalin, Olivier, Muslmani, Machadiya, Estienne, Clément, Echchakir, Hamid, and Abina, Amine M
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- 2009
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167. Secondary malaria vectors in western Kenya include novel species with unexpectedly high densities and parasite infection rates
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Maxwell G. Machani, Anthony Kebira Nyamache, Lucy Wamuyu, Neil F. Lobo, Eric Ochomo, Susan Musembi, Jackline Kosgei, and Amine M. Mustapha
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0301 basic medicine ,Veterinary medicine ,Mosquito Control ,030231 tropical medicine ,Population ,Infectious and parasitic diseases ,RC109-216 ,Mosquito Vectors ,Plasmodium ,law.invention ,Insecticide Resistance ,03 medical and health sciences ,0302 clinical medicine ,law ,parasitic diseases ,Secondary vector ,Anopheles ,medicine ,Animals ,Malaria, Falciparum ,education ,education.field_of_study ,biology ,Ecology ,Sporozoite infection ,Research ,Plasmodium falciparum ,Feeding Behavior ,medicine.disease ,biology.organism_classification ,Kenya ,Malaria ,030104 developmental biology ,Infectious Diseases ,Transmission (mechanics) ,Cross-Sectional Studies ,Parasitology ,Female ,Permethrin ,medicine.drug - Abstract
Background Malaria vector control has been implemented chiefly through indoor interventions targeting primary vectors resulting in population declines—pointing to a possible greater proportional contribution to transmission by secondary malaria vectors with their predominant exophagic and exophilic traits. With a historical focus on primary vectors, there is paucity of data on secondary malaria vectors in many countries in Africa. This study sought to determine the species compositions and bionomic traits, including proportions infected with Plasmodium falciparum and phenotypic insecticide resistance, of secondary vectors in three sites with high malaria transmission in Kisumu County, western Kenya. Methods Cross-sectional sampling of adult Anopheles was conducted using indoor and outdoor CDC light traps (CDC-LT) and animal-baited traps (ABTs) in Kakola-Ombaka and Kisian, while larvae were sampled in Ahero. Secondary vectors captured were exposed to permethrin using WHO bioassays and then analyzed by ELISA to test for proportions infected with P. falciparum sporozoites. All Anopheles were identified to species using morphological keys with a subset being molecularly identified using ITS2 and CO1 sequencing for species identification. Results Two morphologically identified secondary vectors captured—An. coustani and An. pharoensis—were determined to consist of four species molecularly. These included An. christyi, An. sp. 15 BSL-2014, an unidentified member of the An. coustani complex (An. cf. coustani) and a species similar to that of An. pharoensis and An. squamosus (An. cf. pharoensis). Standardized (Anopheles per trap per night) capture rates demonstrate higher proportions of secondary vectors across most trapping methods—with overall indoor and outdoor CDC-LTs and ABT captures composed of 52.2% (n = 93), 78.9% (n = 221) and 58.1% (n = 573) secondary vectors respectively. Secondary vectors were primarily caught outdoors. The overall proportion of secondary vectors with P. falciparum sporozoite was 0.63% (n = 5), with the unidentified species An. cf. pharoensis, determined to carry Plasmodium. Overall secondary vectors were susceptible to permethrin with a > 99% mortality rate. Conclusions Given their high densities, endophily equivalent to primary vectors, higher exophily and Plasmodium-positive proportions, secondary vectors may contribute substantially to malaria transmission. Unidentified species demonstrate the need for further morphological and molecular identification studies towards further characterization. Continued monitoring is essential for understanding their temporal contributions to transmission, the possible elevation of some to primary vectors and the development of insecticide resistance. Graphical Abstract
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- 2021
168. The Lie theory of certain modular form and arithmetic identities
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El Gradechi, Amine M.
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- 2013
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169. Pseudoprogression after proton beam irradiation for a choroid plexus carcinoma in pediatric patient: MRI and PET imaging patterns
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Korchi, Amine M., Garibotto, Valentina, Ansari, Marc, and Merlini, Laura
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- 2013
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170. A physics-informed Bayesian data assimilation approach for real-time drilling tool lateral motion prediction
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Fei Song, Kevin Shi, Ke Li, Amine Mahjoub, Sepand Ossia, Ives Loretz, and Robson Serafim
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Bayesian data assimilation ,real-time inference ,hybrid modeling ,data-model fusion ,recursive Bayesian inference ,unscented Kalman filter ,Mechanical engineering and machinery ,TJ1-1570 - Abstract
In this study, a Bayesian data assimilation method that fuses physics with motion sensor data is demonstrated to infer the dynamic states at points of interest on the bottomhole assembly (BHA) with proper uncertainty quantification. A 4.75 inch-LWD (Logging-while-drilling) tool has been used as a use case, where the dynamic states at the formation evaluation sensor can be predicted in real time with the measurements at the motion sensor as the required inputs. This was achieved with a developed transfer function that utilizes unscented Kalman filtering technique. The robustness of the transfer function was evaluated with synthetic data obtained from finite element analysis (FEA) simulations for various BHA configurations and drilling conditions. It was found that the prediction by the transfer function agrees favorably well with the true states of motion at the formation evaluation sensor. Specifically, using the developed transfer function can help reduce the relative errors for the motion trajectories at the formation evaluation sensor by a factor of 3, and can significantly enhance measurement quality risk classification. The developed transfer function method was further assessed with experimental roll test data, which is considered as close to drilling conditions. The prediction by the transfer function was found consistently close to the ground truth in the presence of backward whirl. The developed modeling method can potentially have broader impacts by enabling fit-for-basin virtual V&V (Verification and Validation) to accelerate LWD tool development, or enabling future drilling optimization.
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- 2024
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171. Epidemiological study and identification of Escherichia coli strains associated with clinical events in Avian farming
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Sarah Saci, Amine Msela, Hillal Sebbane, Bilal Saoudi, Yousra Belounis, Hakima Ait Issad, and Karim Houali
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Algeria ,antibiotic resistance ,avian colibacillosis ,avian pathogenic ,Escherichia coli ,risk factors ,Cattle ,SF191-275 ,Veterinary medicine ,SF600-1100 - Abstract
Avian pathogenic Escherichia coli (APEC) represents a major challenge for the poultry industry, causing significant economic losses. This problem is exacerbated by the misuse use of antibiotics in Veterinary Medicine, leading to the emergence of resistant strains and thus creating a significant risk to Public Health. This study, carried out on 38 poultry farms in Algeria, involved the collection of 200 samples for the isolation of E. coli strains. The resistance of these strains to frequently used antibiotics was assessed using the agar diffusion method. Multiple Correspondence Analysis (MCA) was used to determine potential risk factors. The obtained results revealed that E. coli was present in 30% of samples. Alarming levels of resistance were observed against Tetracycline (81.6%), Ampicillin (78.3%), Ciprofloxacin (68.3%) and Nalidixic acid (60%). Stressful environmental conditions in poultry houses, such as temperature variations, high humidity, poor ventilation and stocking density were identified as key factors in the development of avian colibacillosis. In conclusion, the current study highlights the urgent need to strictly monitor and regulate the use of antibiotics in Veterinary Medicine and improve animal welfare in order to minimize the risk it pose to Public Health originated in the farms. In addition, it is essential that farmers maintain optimal environmental conditions in chicken rearing.
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- 2024
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172. A case of extremely rare pathology: Renal malakoplakia
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Yassine Daghdagh, Ibtissam Razzouki, Amine Moataz, Nisrine Bennani, Mohamed Dakir, Adil Debbagh, and Rachid Aboutaieb
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Malakoplakia ,Kidney ,‘‘Michaelis-gutman’’bodies ,Cell carcinoma ,Diseases of the genitourinary system. Urology ,RC870-923 - Abstract
Malakoplakia is a granulomatous tissue inflammation with a characteristic histological appearance, mainly affecting the urogenital system and morphologically reflecting a macrophage disease. If bladder involvement is the most common, renal involvement is very rare and may be responsible for a differential diagnosis problem with renal cell carcinoma.We present a clinical case of renal malacoplakia mimicking malignant renal cell carcinoma diagnosed after partial nephrectomy in a 58-year-old woman with no history of recurrent urinary infections.
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- 2024
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173. Control of UPOs of Unknown Chaotic Systems via ANN
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Khelifa, Amine M., primary and Boukabou, Abdelkrim, additional
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- 2014
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174. Biocontrol of Biofilm Formation: Jamming of Sessile-Associated Rhizobial Communication by Rhodococcal Quorum-Quenching
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Bourigault, Yvann, primary, Rodrigues, Sophie, additional, Crépin, Alexandre, additional, Chane, Andrea, additional, Taupin, Laure, additional, Bouteiller, Mathilde, additional, Dupont, Charly, additional, Merieau, Annabelle, additional, Konto-Ghiorghi, Yoan, additional, Boukerb, Amine M., additional, Turner, Marie, additional, Hamon, Céline, additional, Dufour, Alain, additional, Barbey, Corinne, additional, and Latour, Xavier, additional
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- 2021
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175. Comparative Analysis of Fecal Microbiomes From Wild Waterbirds to Poultry, Cattle, Pigs, and Wastewater Treatment Plants for a Microbial Source Tracking Approach
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Boukerb, Amine M., primary, Noël, Cyril, additional, Quenot, Emmanuelle, additional, Cadiou, Bernard, additional, Chevé, Julien, additional, Quintric, Laure, additional, Cormier, Alexandre, additional, Dantan, Luc, additional, and Gourmelon, Michèle, additional
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- 2021
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176. Identification and Genomic Characterization of Pathogenic Bacillus altitudinis from Common Pear Trees in Morocco
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Lemjiber, Naima, primary, Naamani, Khalid, additional, Merieau, Annabelle, additional, Dihazi, Abdelhi, additional, Zhar, Nawal, additional, Jediyi, Hicham, additional, and Boukerb, Amine M., additional
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- 2021
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177. To re-route, or not to re-route: Impact of real-time re-routing in urban road networks
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Falek, Amine M., primary, Gallais, Antoine, additional, Pelsser, Cristel, additional, Julien, Sebastien, additional, and Theoleyre, Fabrice, additional
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- 2021
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178. Draft Genome Sequences of Four Commensal Strains of Staphylococcus and Pseudomonas Isolated from Healthy Human Skin
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Xavier Janvier, Amine M. Boukerb, Anne Groboillot, and Marc G. J. Feuilloley
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0303 health sciences ,biology ,030306 microbiology ,Pseudomonas ,Pseudomonas fluorescens ,biology.organism_classification ,medicine.disease_cause ,Genome ,Microbiology ,Staphylococcus capitis ,03 medical and health sciences ,Immunology and Microbiology (miscellaneous) ,Staphylococcus epidermidis ,Staphylococcus aureus ,Genetics ,medicine ,Molecular Biology ,Staphylococcus ,Bacteria ,030304 developmental biology - Abstract
Staphylococcus spp. and Pseudomonas spp. are widely distributed bacteria in the environment and are found in association with animals and humans. Here, we present the draft genome sequence data of the healthy human skin commensal strains Staphylococcus aureus MFP03, Staphylococcus epidermidis MFP04, Staphylococcus capitis MFP08, and Pseudomonas fluorescens MFP05.
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- 2021
179. To re-route, or not to re-route: Impact of real-time re-routing in urban road networks
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University of Strasbourg, Falek, Amine M., Gallais, Antoine, Pelsser, Cristel, Julien, Sebastien, Theoleyre, Fabrice, University of Strasbourg, Falek, Amine M., Gallais, Antoine, Pelsser, Cristel, Julien, Sebastien, and Theoleyre, Fabrice
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Route planning represents a major challenge with a substantial impact on safety, economy, and even climate. An ever-growing urban population caused a significant increase in commuting times, therefore, stressing the prominence of efficient real-time route planning. In essence, the goal is to compute the fastest route to reach the target location in a realistic environment where traffic conditions are time-evolving. Consequently, a large volume of traffic data is potentially required and the route continuously updated. We thereby address the re-routing problem to answer questions such as when, how often, and where is re-routing worthwhile. We base our study on a real dataset, comprising the travel times of the road segments of New York, London, and Chicago, collected over three months. By exploiting this dataset, we implement an optimal algorithm, able to mimic ideal predictions of road segment speeds in the network. Thereby, allowing us to compute the lower bound of travel-time to serve as a reference against other routing techniques. Mainly, we quantify the achieved travel-time gain of a static, no re-routing, and continuous re-routing strategies. Surprisingly, we find that traffic conditions are sufficiently stable for short time windows, and re-routing a vehicle is very seldom useful when exploiting accurate statistics at departure time. Typically, real-time re-routing should only be triggered during rush hours, for long routes, passing through well-identified road segments.
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- 2021
180. Designing artificial tetris players with evolution strategies and racing.
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Amine M. Boumaza
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- 2011
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181. Hyaluronan-Conjugated Carbon Quantum Dots for Bioimaging Use
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Bedia Begum Karakocak, Nathan Ravi, Shunqiang Li, Amine M. Laradji, Mikhail Y. Berezin, and Tina Primeau
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Materials science ,media_common.quotation_subject ,Contrast Media ,02 engineering and technology ,CHO Cells ,010402 general chemistry ,01 natural sciences ,Article ,law.invention ,chemistry.chemical_compound ,Mice ,Cricetulus ,In vivo ,Confocal microscopy ,law ,Cell Line, Tumor ,Neoplasms ,Hyaluronic acid ,Quantum Dots ,Animals ,Humans ,General Materials Science ,Hyaluronic Acid ,Internalization ,media_common ,Carbodiimide ,Fluorescent Dyes ,Microscopy, Confocal ,biology ,CD44 ,Optical Imaging ,021001 nanoscience & nanotechnology ,Carbon ,0104 chemical sciences ,Hyaluronan Receptors ,chemistry ,Targeted drug delivery ,Microscopy, Fluorescence ,Cancer cell ,Biophysics ,biology.protein ,NIH 3T3 Cells ,Female ,0210 nano-technology - Abstract
This work demonstrates the application of hyaluronan-conjugated nitrogen-doped carbon quantum dots (HA-nCQDs) for bioimaging of tumor cells and illustrates their potential use as carriers in targeted drug delivery. Quantum dots are challenging to deliver with specificity, which hinders their application. To facilitate targeted internalization by cancer cells, hyaluronic acid, a natural ligand of CD44 receptors, was covalently grafted on nCQDs. The HA-nCQD conjugate was synthesized by carbodiimide coupling of the amine moieties on nCQDs and the carboxylic acids on HA chains. Conjugated HA-nCQD retained sufficient fluorescence, although with 30% lower quantum efficiency than the original nCQDs. Confocal microscopy showed enhanced internalization of HA-nCQDs, facilitated by CD44 receptors. To demonstrate the specificity of HA-nCQDs toward human tumor cells, patient-derived breast cancer tissue with high-CD44 expression was implanted in adult mice. The tumors were allowed to grow up to 200–250 mm(3) prior to the injection of HA-nCQDs. With either local or systemic injection, we achieved a high level of tumor specificity judged by a strong signal-to-noise ratio between the tumor and the surrounding tissue in vivo. Overall, the results show that HA-nCQDs can be used for imaging of CD44-specific tumors in preclinical models of human cancer and potentially used as carriers for targeted drug delivery into CD44-rich cells.
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- 2020
182. Deleterious Effects of an Air Pollutant (NO2) on a Selection of Commensal Skin Bacterial Strains, Potential Contributor to Dysbiosis?
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Marc G. J. Feuilloley, Xavier Janvier, Djouhar Souak, Stéphane Alexandre, Magalie Barreau, Amine M. Boukerb, Anne Groboillot, Olivier Maillot, Frantz Gouriou, Catherine Grillon, Polymères Biopolymères Surfaces (PBS), Institut national des sciences appliquées Rouen Normandie (INSA Rouen Normandie), Institut National des Sciences Appliquées (INSA)-Normandie Université (NU)-Institut National des Sciences Appliquées (INSA)-Normandie Université (NU)-Institut de Chimie du CNRS (INC)-Institut Normand de Chimie Moléculaire Médicinale et Macromoléculaire (INC3M), Institut de Chimie du CNRS (INC)-École Nationale Supérieure d'Ingénieurs de Caen (ENSICAEN), Normandie Université (NU)-Normandie Université (NU)-Institut national des sciences appliquées Rouen Normandie (INSA Rouen Normandie), Institut National des Sciences Appliquées (INSA)-Normandie Université (NU)-Institut National des Sciences Appliquées (INSA)-Université Le Havre Normandie (ULH), Normandie Université (NU)-Université de Rouen Normandie (UNIROUEN), Normandie Université (NU)-Centre National de la Recherche Scientifique (CNRS)-Université de Caen Normandie (UNICAEN), Normandie Université (NU)-École Nationale Supérieure d'Ingénieurs de Caen (ENSICAEN), Normandie Université (NU)-Université Le Havre Normandie (ULH), Normandie Université (NU)-Centre National de la Recherche Scientifique (CNRS), Université de Rouen Normandie (UNIROUEN), Institut National des Sciences Appliquées (INSA)-Normandie Université (NU)-Institut National des Sciences Appliquées (INSA)-Institut Normand de Chimie Moléculaire Médicinale et Macromoléculaire (INC3M), and Normandie Université (NU)-Institut de Chimie du CNRS (INC)-École Nationale Supérieure d'Ingénieurs de Caen (ENSICAEN)
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Microbiology (medical) ,skin microbiota ,Staphylococcus ,air pollution ,lcsh:QR1-502 ,AFM (atomic force microscope) ,Human skin ,nitrogen dioxide (NO2) ,Biology ,Corynebacterium ,medicine.disease_cause ,Microbiology ,lcsh:Microbiology ,03 medical and health sciences ,Staphylococcus epidermidis ,Pseudomonas ,11. Sustainability ,medicine ,nitrogen dioxide (NO 2 ) ,ComputingMilieux_MISCELLANEOUS ,030304 developmental biology ,Pollutant ,[SDV.EE.SANT]Life Sciences [q-bio]/Ecology, environment/Health ,0303 health sciences ,Corynebacterium tuberculostearicum ,030306 microbiology ,biology.organism_classification ,medicine.disease ,[SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology ,3. Good health ,Staphylococcus capitis ,3-nitrotyrosine(3-NT) ,13. Climate action ,Staphylococcus aureus ,Dysbiosis ,[SDV.EE.IEO]Life Sciences [q-bio]/Ecology, environment/Symbiosis - Abstract
The skin constitutes with its microbiota the first line of body defense against exogenous stress including air pollution. Especially in urban or sub-urban areas, it is continuously exposed to many environmental pollutants including gaseous nitrogen dioxide (gNO2). Nowadays, it is well established that air pollution has major effects on the human skin, inducing various diseases often associated with microbial dysbiosis. However, very few is known about the impact of pollutants on skin microbiota. In this study, a new approach was adopted, by considering the alteration of the cutaneous microbiota by air pollutants as an indirect action of the harmful molecules on the skin. The effects of gNO2 on this bacterial skin microbiota was investigated using a device developed to mimic the real-life contact of the gNO2 with bacteria on the surface of the skin. Five strains of human skin commensal bacteria were considered, namely Staphylococcus aureus MFP03, Staphylococcus epidermidis MFP04, Staphylococcus capitis MFP08, Pseudomonas fluorescens MFP05, and Corynebacterium tuberculostearicum CIP102622. Bacteria were exposed to high concentration of gNO2 (10 or 80 ppm) over a short period of 2 h inside the gas exposure device. The physiological, morphological, and molecular responses of the bacteria after the gas exposure were assessed and compared between the different strains and the two gNO2 concentrations. A highly significant deleterious effect of gNO2 was highlighted, particularly for S. capitis MFP08 and C. tuberculostearicum CIP102622, while S. aureus MFP03 seems to be the less sensitive strain. It appeared that the impact of this nitrosative stress differs according to the bacterial species and the gNO2 concentration. Thus the exposition to gNO2 as an air pollutant could contribute to dysbiosis, which would affect skin homeostasis. The response of the microbiota to the nitrosative stress could be involved in some pathologies such as atopic dermatitis.
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- 2020
183. Activation of the Cell Wall Stress Response in Pseudomonas aeruginosa Infected by a Pf4 Phage Variant
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Gerald Brenner-Weiss, Amine M. Boukerb, Julien Verdon, Emeline Bouffartigues, Onyedikachi Cecil Azuama, Emile Béré, Nicole Orange, Olivier Lesouhaitier, Michael Nusser, Mélyssa Cambronel, Sophie Rodrigues, Sylvie Chevalier, Olivier Maillot, Pierre Cornelis, Audrey David, Marc G. J. Feuilloley, Damien Tortuel, Ali Tahrioui, Ecologie et biologie des interactions (EBI), Université de Poitiers-Centre National de la Recherche Scientifique (CNRS), Microbiologie de l'Eau (MDE), Université de Poitiers-Centre National de la Recherche Scientifique (CNRS)-Université de Poitiers-Centre National de la Recherche Scientifique (CNRS), Vriendenkring VUB, and Microbiology
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Life sciences ,biology ,Microbiology (medical) ,cell envelope ,[SDV]Life Sciences [q-bio] ,medicine.disease_cause ,Microbiology ,biofilm ,cell wall stress response ,Cell wall ,03 medical and health sciences ,chemistry.chemical_compound ,AlgU ,Sigma factor ,ddc:570 ,Virology ,Guanosine monophosphate ,medicine ,[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biochemistry [q-bio.BM] ,lcsh:QH301-705.5 ,Prophage ,ComputingMilieux_MISCELLANEOUS ,030304 developmental biology ,0303 health sciences ,Pf4 phage variant ,030306 microbiology ,Chemistry ,Pseudomonas aeruginosa ,membrane fluidity ,Biofilm ,SigX ,c-di-GMP ,Phenotype ,3. Good health ,Cell biology ,[SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology ,lcsh:Biology (General) ,Cell envelope ,[SDE.BE]Environmental Sciences/Biodiversity and Ecology - Abstract
Pseudomonas aeruginosa PAO1 has an integrated Pf4 prophage in its genome, encoding a relatively well-characterized filamentous phage, which contributes to the bacterial biofilm organization and maturation. Pf4 variants are considered as superinfectives when they can re-infect and kill the prophage-carrying host. Herein, the response of P. aeruginosa H103 to Pf4 variant infection was investigated. This phage variant caused partial lysis of the bacterial population and modulated H103 physiology. We show by confocal laser scanning microscopy that a Pf4 variant-infection altered P. aeruginosa H103 biofilm architecture either in static or dynamic conditions. Interestingly, in the latter condition, numerous cells displayed a filamentous morphology, suggesting a link between this phenotype and flow-related forces. In addition, Pf4 variant-infection resulted in cell envelope stress response, mostly mediated by the AlgU and SigX extracytoplasmic function sigma factors (ECF&sigma, ). AlgU and SigX involvement may account, at least partly, for the enhanced expression level of genes involved in the biosynthesis pathways of two matrix exopolysaccharides (Pel and alginates) and bis-(3&rsquo, 5&rsquo, )-cyclic dimeric guanosine monophosphate (c-di-GMP) metabolism.
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- 2020
184. Sex and gender correlates of sexually polymorphic cognition
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Louis Cartier, Mina Guérin, Fanny Saulnier, Ioana Cotocea, Amine Mohammedi, Fadila Moussaoui, Sarah Kheloui, and Robert-Paul Juster
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Sexually polymorphic cognition ,Sex differences ,Sex hormones ,LGBTQ+ ,Gender identity ,Gender roles ,Medicine ,Physiology ,QP1-981 - Abstract
Abstract Background Sexually polymorphic cognition (SPC) results from the interaction between biological (birth-assigned sex (BAS), sex hormones) and socio-cultural (gender identity, gender roles, sexual orientation) factors. The literature remains quite mixed regarding the magnitude of the effects of these variables. This project used a battery of classic cognitive tests designed to assess the influence of sex hormones on cognitive performance. At the same time, we aimed to assess the inter-related and respective effects that BAS, sex hormones, and gender-related factors have on SPC. Methods We recruited 222 adults who completed eight cognitive tasks that assessed a variety of cognitive domains during a 150-min session. Subgroups were separated based on gender identity and sexual orientation and recruited as follows: cisgender heterosexual men (n = 46), cisgender non-heterosexual men (n = 36), cisgender heterosexual women (n = 36), cisgender non-heterosexual women (n = 38), gender diverse (n = 66). Saliva samples were collected before, during, and after the test to assess testosterone, estradiol, progesterone, cortisol, and dehydroepiandrosterone. Psychosocial variables were derived from self-report questionnaires. Results Cognitive performance reflects sex and gender differences that are partially consistent with the literature. Interestingly, biological factors seem to better explain differences in male-typed cognitive tasks (i.e., spatial), while psychosocial factors seem to better explain differences in female-typed cognitive tasks (i.e., verbal). Conclusion Our results establish a better comprehension of SPC over and above the effects of BAS as a binary variable. We highlight the importance of treating sex as a biological factor and gender as a socio-cultural factor together since they collectively influence SPC.
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- 2024
- Full Text
- View/download PDF
185. New Insights in Fatty Liver Preservation: A Role for Carbonic Anhydrase II.: Abstract# C2060
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Bejaoui, M., Zaouali, Amine M., Pantazi, E., Folch-Puy, E., Ben Abdennebi, H., Hotter, G., and Catafau, Rosello J.
- Published
- 2014
186. Sirtuin 1 in Steatotic and Non Steatotic Liver Graft Preservation: Differential Aspects.: Abstract# C1664
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Bejaoui, M., Pantazi, E., Zaouali, Amine M., Folch-Puy, E., Bardag-Gorce, F., Oliva, J., Ben Abedennebi, H., and Catafau, Rosello J.
- Published
- 2014
187. Prévalence de l’incontinence urinaire chez la femme jeune de moins de 40 ans à Marrakech
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Dahami, Z., Bentani, N., Amine, M., Moudouni, M. S., and Sarf, I.
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- 2009
- Full Text
- View/download PDF
188. Distributed energy efficiency in future home environments
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Hlavacs, Helmut, Weidlich, Roman, Hummel, Karin A., Houyou, Amine M., Berl, Andreas, and de Meer, Hermann
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- 2008
- Full Text
- View/download PDF
189. Magnesium status in a population of type 2 diabetes mellitus in Morocco
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Quiddi, Wafa, primary, Tarmidi, M, additional, Mansouri, A, additional, Amine, M, additional, Baizri, H, additional, Boukhira, A, additional, Chellak, S, additional, and Wake, Addisu Dabi, additional
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- 2021
- Full Text
- View/download PDF
190. Redox-Responsive Hyaluronic Acid-Based Nanogels for the Topical Delivery of the Visual Chromophore to Retinal Photoreceptors
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Laradji, Amine M., primary, Kolesnikov, Alexander V., additional, Karakoçak, Bedia B., additional, Kefalov, Vladimir J., additional, and Ravi, Nathan, additional
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- 2021
- Full Text
- View/download PDF
191. New insights in COVID-19–associated chilblains: A comparative study with chilblain lupus erythematosus
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Marion Rousselot, Amine M. Abina, Anne Couvelard, Sabine Mignot, Fabrice Bouscarat, Nour Abdelhedi, Pascale Nicaise, Gilles Collin, Patrick Le Bozec, Charlotte Charpentier, Valentine Marie Ferré, Gilles Battesti, Catherine Picard-Dahan, Coralie Lheure, Lydia Deschamps, Vincent Descamps, Amélie Tournier, Salima Hacein-Bey-Abina, Justine Lavaud, Diane Descamps, Jihane El Khalifa, Florence Brunet-Possenti, AP-HP - Hôpital Bichat - Claude Bernard [Paris], Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP), Unité de Technologies Chimiques et Biologiques pour la Santé (UTCBS - UM 4 (UMR 8258 / U1022)), Institut de Chimie du CNRS (INC)-Université de Paris (UP)-Centre National de la Recherche Scientifique (CNRS)-Institut National de la Santé et de la Recherche Médicale (INSERM), Institut National de la Santé et de la Recherche Médicale (INSERM)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Cité (UPCité), and CCSD, Accord Elsevier
- Subjects
Plasmacytoid dendritic cells, pDCs ,2019-20 coronavirus outbreak ,medicine.medical_specialty ,Coronavirus disease 2019 (COVID-19) ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,Dermatology ,Article ,030207 dermatology & venereal diseases ,03 medical and health sciences ,0302 clinical medicine ,Pandemic ,medicine ,Chilblains ,ComputingMilieux_MISCELLANEOUS ,[SDV.MHEP] Life Sciences [q-bio]/Human health and pathology ,business.industry ,Type-1 interferon, IFN-1 ,Chilblain lupus erythematosus ,Antineutrophils cytoplasmic antibodies, ANCA ,medicine.disease ,030220 oncology & carcinogenesis ,Epidemic chilblain, EC ,business ,Chilblain lupus erythematosus, CLE ,[SDV.MHEP]Life Sciences [q-bio]/Human health and pathology - Abstract
International audience
- Published
- 2020
- Full Text
- View/download PDF
192. MUSE: une planification d'itinéraires inspirée de Séparateurs Multimodaux
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Falek, Amine M., Pelsser, Cristel, Julien, Sébastien, Theoleyre, Fabrice, Laboratoire des sciences de l'ingénieur, de l'informatique et de l'imagerie (ICube), École Nationale du Génie de l'Eau et de l'Environnement de Strasbourg (ENGEES)-Université de Strasbourg (UNISTRA)-Institut National des Sciences Appliquées - Strasbourg (INSA Strasbourg), Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Institut National de Recherche en Informatique et en Automatique (Inria)-Les Hôpitaux Universitaires de Strasbourg (HUS)-Centre National de la Recherche Scientifique (CNRS)-Matériaux et Nanosciences Grand-Est (MNGE), Université de Strasbourg (UNISTRA)-Université de Haute-Alsace (UHA) Mulhouse - Colmar (Université de Haute-Alsace (UHA))-Institut National de la Santé et de la Recherche Médicale (INSERM)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)-Université de Strasbourg (UNISTRA)-Université de Haute-Alsace (UHA) Mulhouse - Colmar (Université de Haute-Alsace (UHA))-Institut National de la Santé et de la Recherche Médicale (INSERM)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)-Réseau nanophotonique et optique, Université de Strasbourg (UNISTRA)-Université de Haute-Alsace (UHA) Mulhouse - Colmar (Université de Haute-Alsace (UHA))-Centre National de la Recherche Scientifique (CNRS)-Université de Strasbourg (UNISTRA)-Centre National de la Recherche Scientifique (CNRS), Technology and Strategy (T&S), Theoleyre, Fabrice, Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Centre National de la Recherche Scientifique (CNRS)-Matériaux et nanosciences d'Alsace (FMNGE), Institut de Chimie du CNRS (INC)-Université de Strasbourg (UNISTRA)-Université de Haute-Alsace (UHA) Mulhouse - Colmar (Université de Haute-Alsace (UHA))-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Chimie du CNRS (INC)-Université de Strasbourg (UNISTRA)-Université de Haute-Alsace (UHA) Mulhouse - Colmar (Université de Haute-Alsace (UHA))-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Réseau nanophotonique et optique, Centre National de la Recherche Scientifique (CNRS)-Université de Strasbourg (UNISTRA)-Université de Haute-Alsace (UHA) Mulhouse - Colmar (Université de Haute-Alsace (UHA))-Centre National de la Recherche Scientifique (CNRS)-Université de Strasbourg (UNISTRA), and Université de Strasbourg
- Subjects
graph partitioning ,Mots-clefs : multimodal algorithm ,multimodal algorithm ,route planning ,[INFO.INFO-DS]Computer Science [cs]/Data Structures and Algorithms [cs.DS] ,[INFO.INFO-DC] Computer Science [cs]/Distributed, Parallel, and Cluster Computing [cs.DC] ,cells ,[INFO.INFO-DS] Computer Science [cs]/Data Structures and Algorithms [cs.DS] ,[INFO.INFO-DC]Computer Science [cs]/Distributed, Parallel, and Cluster Computing [cs.DC] - Abstract
International audience; Le domaine des algorithmes de calcul de plus courts chemins connait un essor important avec le développement du cloud. Quelques solutions, dites multimodales, sont conçues pour combiner divers modes de transports, mais au prix d'une augmentation significative de la complexité. Nous proposons ici MUSE, un algorithme basé sur les séparateurs de graphes, mais adapté au cas multimodal. Dans une phase de prétraitement, nous découpons tout d'abord le graphe en partitions indépendantes (ou cellules), chacune découpée en modes de transport afin de pouvoir plus tard répondreà n'importe quelle requête,. Ensuite, nous précalculons toutes les plus courtes routes, sur ce petit nombre de cellules, en tenant compte des labels (modes) de chaque arête. Nous pouvons ainsi répondreà une requête très rapidement dans la phase online : l'utilisateur spécifie les séquences de mode qu'il autorise, et exploite les plus courtes routes pré-calculées.
- Published
- 2020
193. Spatiotemporal analysis of rainfed cereal yields across the eastern high plateaus of Algeria: an exploratory investigation of the effects of weather factors
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Amine Oulmane, Amine M. Benmehaia, and Noureddine Merniz
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Agronomy ,Agriculture ,business.industry ,Spatiotemporal Analysis ,Yield (finance) ,Crop yield ,food and beverages ,Climate change ,Environmental science ,Precipitation ,Common wheat ,Weather factors ,business - Abstract
In this study, the climatic determinants of cereal yield differentials in the eastern high plateaus of Algeria were explored and analyzed. Using panel data for five regions from the period 2000–2016, we analyzed the relationships between crop yield and two climatic variables (temperature and precipitation) for three major Algerian rainfed cereals: durum wheat, common wheat, and barley. The Mann–Kendall test was applied to assess the significance and magnitude of yield trends, and pooled OLS regression was employed to analyze the determinants of the variability in cereal yields. Results showed that the rainfed cereal yields in this zone are highly variable; that the minimum temperature and average annual precipitation strongly influence cereal yield differentials, with an observed cumulative (lagged) effect; and that the maximum temperature has no direct (or lagged) effect (i.e., its effect on the yield is not statistically significant). The findings of this study also suggest that, despite significant regional differences in semiarid environments, advances in the production technology used in cereal farming have had consistent effects on the yield stability—increasing yields of common wheat but barely influencing yields of durum wheat and barley. These are important findings for the rainfed cereal sector of Algerian dryland agriculture, as they permit a better understanding of the impacts of climate change on Algerian agriculture.
- Published
- 2020
194. Adhesion and Stability of Nanocellulose Coatings on Flat Polymer Films and Textiles
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Raha Saremi, Amine M. Laradji, Nikolay Borodinov, Sergiy Minko, Suraj Sharma, and Igor Luzinov
- Subjects
Materials science ,Biocompatibility ,Polymers ,polymer ,Nanofibers ,Pharmaceutical Science ,engineering.material ,Permeability ,Article ,Analytical Chemistry ,Nanocellulose ,lcsh:QD241-441 ,Physical Phenomena ,lcsh:Organic chemistry ,Coating ,Specific surface area ,Drug Discovery ,Physical and Theoretical Chemistry ,Composite material ,Cellulose ,Porosity ,nanocellulose ,chemistry.chemical_classification ,textile ,Textiles ,Organic Chemistry ,Food Packaging ,coating ,Polymer ,Adhesion ,Nanostructures ,Polyester ,Nylons ,adhesion ,surfaces,_coatings_films ,chemistry ,Chemistry (miscellaneous) ,Mechanical Tests ,engineering ,Nanoparticles ,Molecular Medicine - Abstract
Renewable nanocellulose materials received increased attention owing to their small dimensions, high specific surface area, high mechanical characteristics, biocompatibility, and compostability. Nanocellulose coatings are among many interesting applications of these materials to functionalize different by composition and structure surfaces, including plastics, polymer coatings, and textiles with broader applications from food packaging to smart textiles. Variations in porosity and thickness of nanocellulose coatings are used to adjust a load of functional molecules and particles into the coatings, their permeability, and filtration properties. Mechanical stability of nanocellulose coatings in a wet and dry state are critical characteristics for many applications. In this work, nanofibrillated and nanocrystalline cellulose coatings deposited on the surface of polymer films and textiles made of cellulose, polyester, and nylon are studied using atomic force microscopy, ellipsometry, and T-peel adhesion tests. Methods to improve coatings&rsquo, adhesion and stability using physical and chemical cross-linking with added polymers and polycarboxylic acids are analyzed in this study. The paper reports on the effect of the substrate structure and ability of nanocellulose particles to intercalate into the substrate on the coating adhesion.
- Published
- 2020
195. Draft Genome Sequences of Micrococcus luteus MFP06 and MFP07, Isolated from the Skin of Healthy Volunteers
- Author
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Djouhar Souak, Amine M. Boukerb, Magalie Barreau, Marc G. J. Feuilloley, and Cécile Duclairoir-Poc
- Subjects
Genetics ,0303 health sciences ,Osmotic shock ,030306 microbiology ,DNA repair ,Genome Sequences ,Human skin ,Biology ,biology.organism_classification ,Genome ,Monoacylglycerol lipase ,03 medical and health sciences ,Immunology and Microbiology (miscellaneous) ,Healthy volunteers ,bacteria ,Micrococcus luteus ,Molecular Biology ,Gene ,030304 developmental biology - Abstract
We report the draft genome sequences of two Micrococcus luteus strains, MFP06 and MFP07, isolated from human skin. The genome assemblies consist of 2,480 and 2,417 kbp with 2,337 and 2,240 coding sequences, respectively. The genomes contain genes potentially involved in osmotic stress tolerance, DNA repair, monoacylglycerol hydrolysis, and beta-lactone synthesis.
- Published
- 2020
196. Draft Genome Sequence of Enterococcus faecalis Strain OB15, a Probiotic Strain Recently Isolated from Tunisian Rigouta Cheese
- Author
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Olfa Baccouri, Marc G. J. Feuilloley, Ferid Abidi, Flore Nilly, Nathalie Connil, Amine M. Boukerb, Issam Smaali, and Mélyssa Cambronel
- Subjects
Whole genome sequencing ,0303 health sciences ,biology ,Strain (chemistry) ,Genome Sequences ,biology.organism_classification ,C content ,Enterococcus faecalis ,law.invention ,03 medical and health sciences ,Probiotic ,0302 clinical medicine ,Immunology and Microbiology (miscellaneous) ,law ,Genetics ,Fermentation ,Food science ,Molecular Biology ,030217 neurology & neurosurgery ,030304 developmental biology - Abstract
Enterococcus faecalis OB15 is a probiotic strain that was isolated from rigouta, a popular traditional Tunisian fermented cheese. We report here the draft genome sequence of this strain, consisting of 2,912,159 bp, with an average G+C content of 37.49%.
- Published
- 2020
197. Dialog between skin and its microbiota: Emergence of 'Cutaneous Bacterial Endocrinology'
- Author
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Sylvie Chevalier, Chloé Catovic, Pierre-Jean Racine, Yoan Konto-Ghiorghi, Anne Groboillot, Xavier Janvier, Nicole Orange, Marc G. J. Feuilloley, Maximilien Clabaut, Olivier Lesouhaitier, Cécile Duclairoir-Poc, Amine M. Boukerb, and Djouhar Souak
- Subjects
0301 basic medicine ,medicine.medical_specialty ,Virulence ,Dermatology ,Calcitonin gene-related peptide ,Biochemistry ,030207 dermatology & venereal diseases ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Internal medicine ,medicine ,Humans ,Microbiome ,Molecular Biology ,Skin ,Neurotransmitter Agents ,biology ,Bacteria ,Microbiota ,biology.organism_classification ,030104 developmental biology ,Endocrinology ,chemistry ,Calcitonin ,Neurohormones ,Histamine ,Hormone - Abstract
Microbial endocrinology is studying the response of microorganisms to hormones and neurohormones and the microbiota production of hormones-like molecules. Until now, it was mainly applied to the gut and revealed that the intestinal microbiota should be considered as a real organ in constant and bilateral interactions with the whole human body. The skin harbours the second most abundant microbiome and contains an abundance of nerve terminals and capillaries, which in addition to keratinocytes, fibroblasts, melanocytes, dendritic cells and endothelial cells, release a huge diversity of hormones and neurohormones. In the present review, we will examine recent experimental data showing that, in skin, molecules such as substance P, calcitonin gene-related peptide, natriuretic peptides and catecholamines can directly affect the physiology and virulence of common skin-associated bacteria. Conversely, bacteria are able to synthesize and release compounds including histamine, glutamate and γ-aminobutyric acid or peptides showing partial homology with neurohormones such as α-melanocyte-stimulating hormone (αMSH). The more surprising is that some viruses can also encode neurohormones mimicking proteins. Taken together, these elements demonstrate that there is also a cutaneous microbial endocrinology and this emerging concept will certainly have important consequences in dermatology.
- Published
- 2020
198. Correction for Boukerb et al., 'Complete Genome Sequence of Campylobacter armoricus CA639, Which Carries Two Plasmids, Compiled Using Oxford Nanopore and Illumina Sequencing Technologies'
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Michèle Gourmelon, Julien Schaeffer, Amine M. Boukerb, Françoise S. Le Guyader, Gregory Carrier, and Joëlle Serghine
- Subjects
Whole genome sequencing ,0303 health sciences ,030306 microbiology ,Campylobacter ,Computational biology ,Biology ,medicine.disease_cause ,03 medical and health sciences ,Plasmid ,Immunology and Microbiology (miscellaneous) ,Genetics ,medicine ,Nanopore sequencing ,Line (text file) ,Molecular Biology ,Illumina dye sequencing ,Support services ,030304 developmental biology - Abstract
Volume 9, no. 1, e01309-19, 2020, [https://doi.org/10.1128/MRA.01309-19][1]. Page 3: Line 3 of Acknowledgments should read as follows. “… and support services) and Catherine Ragimbeau from the Laboratoire National de Sante for providing Illumina raw reads.” [1]: /lookup/doi/10.1128/MRA.
- Published
- 2020
199. Draft Genome Sequences of Five Potentially Probiotic Enterococcus faecium Strains Isolated from an Artisanal Tunisian Meat (Dried Ossban)
- Author
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Amine M. Boukerb, Mounir Ferchichi, Marc G. J. Feuilloley, Mohamed Zommiti, Khaled Sebei, and Nathalie Connil
- Subjects
0303 health sciences ,biology ,030306 microbiology ,Genome Sequences ,biology.organism_classification ,C content ,Genome ,law.invention ,03 medical and health sciences ,Probiotic ,Immunology and Microbiology (miscellaneous) ,law ,Genetics ,Food science ,Molecular Biology ,030304 developmental biology ,Enterococcus faecium - Abstract
Here, we report the first draft genome sequences of five bacteriocinogenic and potentially probiotic Enterococcus faecium strains (MZF1 to MZF5), which were isolated from homemade Tunisian meat (dried ossban). The estimated median genome sizes were about 2,582,641 ± 109,039 bp, with a median G+C content of 40% ± 0.4%.
- Published
- 2020
200. Draft Genome Sequences of Four Pseudomonas aeruginosa Clinical Strains with Various Biofilm Phenotypes
- Author
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Olivier Lesouhaitier, Albane Jouault, Emeline Bouffartigues, Alexis Bazire, Elise Persyn, Emilie Portier, Amine M. Boukerb, Sylvie Chevalier, Jocelyne Caillon, Erwan Pernet, Alain Dufour, Marjolaine Simon, Marc G. J. Feuilloley, Laboratoire de Microbiologie Signaux et Microenvironnement (LMSM), Université de Rouen Normandie (UNIROUEN), Normandie Université (NU)-Normandie Université (NU), Laboratoire de Biotechnologie et Chimie Marines (LBCM), Université de Bretagne Sud (UBS)-Université de Brest (UBO)-Institut Universitaire Européen de la Mer (IUEM), Institut de Recherche pour le Développement (IRD)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Brest (UBO)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS), Laboratoire de Biotechnologie et Chimie Marine (LBCM), Institut de Recherche pour le Développement (IRD)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Brest (UBO)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-Université de Bretagne Sud (UBS)-Université de Brest (UBO)-Institut Universitaire Européen de la Mer (IUEM), Thérapeutiques cliniques et expérimentales des infections (EA 3826) (EA 3826), Université de Nantes - UFR de Médecine et des Techniques Médicales (UFR MEDECINE), and Université de Nantes (UN)-Université de Nantes (UN)
- Subjects
congenital, hereditary, and neonatal diseases and abnormalities ,0303 health sciences ,Pseudomonas aeruginosa ,Genome Sequences ,Biofilm ,Biology ,medicine.disease_cause ,medicine.disease ,Genome ,C content ,Phenotype ,Cystic fibrosis ,[SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology ,3. Good health ,Microbiology ,03 medical and health sciences ,0302 clinical medicine ,Immunology and Microbiology (miscellaneous) ,Genetics ,medicine ,Molecular Biology ,Genome size ,030217 neurology & neurosurgery ,ComputingMilieux_MISCELLANEOUS ,030304 developmental biology - Abstract
Biofilms produced by Pseudomonas aeruginosa present a serious threat to cystic fibrosis patients. Here, we report the draft genome sequences of four cystic fibrosis isolates displaying various mucoid and biofilm phenotypes. The estimated average genome size was about 6,255,986 ± 50,202 bp with a mean G+C content of 66.52 ± 0.06%.
- Published
- 2020
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