1,389 results on '"Aldolase"'
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152. Researchers Submit Patent Application, "Salt And Crystal Form Of Ketohexokinase Inhibitor And Use Thereof", for Approval (USPTO 20230271947).
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- 2023
153. Findings from Zhejiang University of Technology Yields New Data on Mycobacteria (Aldolase Sala Dominates C24 Steroidal Side-chain-cleavage In the Phytosterol Degradation From Mycobacterium Neoaurum).
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Hangzhou, People's Republic of China, Asia, Actinomycetales, Aldolase, Alternative Medicine, Drugs and Therapies, Enzymes and Coenzymes, Gram-Positive Asporogenous Rods, Gram-Positive Bacteria, Gram-Positive Rods, Health and Medicine, Mycobacteria, Mycobacteriaceae, Mycobacterium, Pharmaceuticals, Phytosterol Therapy, Thiolase Keywords: Hangzhou; People's Republic of China; Asia; Actinomycetales; Aldolase; Alternative Medicine; Drugs and Therapies; Enzymes and Coenzymes; Gram-Positive Asporogenous Rods; Gram-Positive Bacteria; Gram-Positive Rods; Health and Medicine; Mycobacteria; Mycobacteriaceae; Mycobacterium; Pharmaceuticals; Phytosterol Therapy; Thiolase EN Hangzhou People's Republic of China Asia Actinomycetales Aldolase Alternative Medicine Drugs and Therapies Enzymes and Coenzymes Gram-Positive Asporogenous Rods Gram-Positive Bacteria Gram-Positive Rods Health and Medicine Mycobacteria Mycobacteriaceae Mycobacterium Pharmaceuticals Phytosterol Therapy Thiolase 870 870 1 08/28/23 20230901 NES 230901 2023 SEP 1 (NewsRx) -- By a News Reporter-Staff News Editor at Drug Week -- Investigators publish new report on Gram-Positive Bacteria - Mycobacteria. [Extracted from the article]
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- 2023
154. Study Findings from University of Porto Advance Knowledge in Biochemistry (Blood Biochemical Changes After Dramatic Increase in Running Training Volume: Exploratory Study in 3 Elite Soldiers).
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Keywords for this news article include: University of Porto, Aldolase, Biochemicals, Biochemistry, Enzymes and Coenzymes. Keywords: Aldolase; Biochemicals; Biochemistry; Chemicals; Enzymes and Coenzymes EN Aldolase Biochemicals Biochemistry Chemicals Enzymes and Coenzymes 7218 7218 1 08/14/23 20230818 NES 230818 2023 AUG 18 (NewsRx) -- By a News Reporter-Staff News Editor at Health & Medicine Week -- Investigators discuss new findings in biochemistry. [Extracted from the article]
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- 2023
155. ENZYMES OF ENERGY METABOLISM IN BRAIN AND CHRONIC STRESS
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Koshoridze N.I., Menabde K.O., Chachua M.V., Kuchukashvili Z.T., and Chipashvili M.D.
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stress ,aldolase ,creatinkinase ,succinatdehidrogenase ,Biochemistry ,QD415-436 - Abstract
The development of changes in the activity of creatinkinase, aldolase and succinatdehydrogenase in brain cells under 30-day long stress induced by isolation and violated diurnal cycle has been studied. It was shown that these enzymes heterogeneously responded to 30-day long stress. Particular sensitivity was recorded in the case of succinatedehydrogenase, which showed the decline of activityin various sections of the brain by 60-80% on average. Unlike succinatedehydrogenase, aldolase activity increased on the 10th day of stress and then declined. Similar results were observed in relationto phosphokinase activity.
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- 2009
156. Recent Advances in the Substrate Selectivity of Aldolases
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Virgil Hélaine, Cédric Gastaldi, Marielle Lemaire, Pere Clapés, Christine Guérard-Hélaine, Institut de Chimie de Clermont-Ferrand (ICCF), Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)-Université Clermont Auvergne (UCA)-Institut national polytechnique Clermont Auvergne (INP Clermont Auvergne), Université Clermont Auvergne (UCA)-Université Clermont Auvergne (UCA), and Ministerio de Ciencia e Innovación (España)
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Nucleophile ,Electrophile ,Aldol reaction ,Aldolase ,Biocatalysis ,[CHIM]Chemical Sciences ,General Chemistry ,Catalysis ,ComputingMilieux_MISCELLANEOUS - Abstract
Aldolases are powerful C-C bond-forming enzymes in biocatalysis because of their unparalleled stereoselectivity, the ease with which reactions that do not require cofactor recycling can be set up, the large number of different types and families available, and reaction feasibility under mild operating conditions. Since 2016, major discoveries have been made that broaden the scope of both nucleophile and electrophile substrates. For instance, more hydrophobic, sterically hindered nucleophile components have led to structures that are difficult to synthesize with purely chemical procedures. Likewise, the use of structurally diverse ketones as electrophiles has allowed the stereoselective synthesis of tertiary alcohols. These major advances will be presented and discussed in this Review., This work was supported by the French National Center for Scientific Research (CNRS) and the University of Clermont Auvergne. This project has received funding from the Ministerio de Ciencia e Innovación (MICIN), the Fondo Europeo de Desarrollo Regional (FEDER) (grant RTI2018-094637-B-I00), and Programación Conjunta Internacional (PCI2018-092937), through the initiative ERA CoBioTech (Tralaminol).
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- 2022
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157. Fish Allergy: Fishing for Novel Diagnostic and Therapeutic Options
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J A M Emons, A A J M Van de Ven, J. N. G. Oude Elberink, D Dijkema, Groningen Research Institute for Asthma and COPD (GRIAC), and Pediatrics
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medicine.medical_specialty ,Allergy ,CLINICAL MONOSENSITIVITY ,MAJOR ALLERGEN ,Fishing ,SALMON ,Mackerel ,Fish species ,Enolase ,FOOD ALLERGY ,03 medical and health sciences ,DOUBLE-BLIND ,0302 clinical medicine ,medicine ,Aldolase ,Animals ,Humans ,Hunting ,Immunology and Allergy ,Medical history ,IGE ,Skin Tests ,biology ,IDENTIFICATION ,business.industry ,Fish allergens ,PARVALBUMIN ,Fishes ,General Medicine ,Allergens ,Immunoglobulin E ,Fish allergy ,biology.organism_classification ,medicine.disease ,Dermatology ,Parvalbumins ,030228 respiratory system ,TILAPIA OREOCHROMIS-MOSSAMBICUS ,CROSS-REACTIVITY ,%22">Fish ,Tuna ,business ,Variable allergenicity ,Food Hypersensitivity ,030215 immunology - Abstract
Fish allergy is one of the most common food allergies. The currently recommended treatment commonly consists of avoiding all fish species. Recent literature suggests that these recommendations are overprotective for the majority of fish-allergic patients. This review summarizes recent findings and provides practical information regarding management of fish allergy in the individual patient. After precise history taking supported by additional specific IgE measurements and/or skin prick tests, fish-allergic patients can generally be categorized into the following clinical clusters: (A) poly-sensitized patients reacting to all fish species due to their sensitization to the panallergen β-parvalbumin, (B) mono-sensitized patients with selective reactions to individual fish species only, and (C) oligo-sensitized patients reacting to several specific fish. A number of allergens including parvalbumin, enolase, and aldolase can be involved. Depending on the specific cluster the patient belongs to, oral food challenges for one or more fish species can be performed with the aim to provide safe alternatives for consumption. This way, several alternative fish species can be identified for mono- and oligo-sensitized patients that can safely be consumed. Notably, even poly-sensitized patients generally tolerate fish species low in β-parvalbumin such as tuna and mackerel, particularly when processed. Taken together, allergological evaluation of patients with a documented fish allergy should be strongly considered, as it will allow the majority of patients to safely reintroduce one or more fish species.
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- 2022
158. Optimization of aldolase immobilization on mesocellular silica foam
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Skendrović, Dino and Vrsalović Presečki, Ana
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Aldolase ,Immobilization ,Mesoporous silica - Abstract
Due to the pharmaceutical industry’s need for sustainable and cost-effective production of chiral drug intermediates, biocatalytic processes offer a valuable alternative to conventional chemical synthesis.1 A notable example of such a chiral intermediate is the statin precursor, which can be synthesized in a single step by double aldol addition using the enzyme deoxyribose-phosphate aldolase (DERA) (Figure 1). Statins themselves are a class of drugs used for lowering levels of cholesterol in blood. Although the use of biocatalysis instead of chemical synthesis overcomes the problem of chirality, it is still necessary to deal with the instability of DERA in the presence of aldehyde substrates and reaction intermediate.2 Immobilization of the enzyme is one of the ways to overcome this obstacle. Covalent immobilization on a solid support can provide additional stability and in some cases even increase activity due to conformational changes of the bound enzyme. In this work, mesocellular silica foam (MCF), a type of mesoporous silica, was used as a solid support synthesized by the sol-gel method. As shown in Figure 2, MCF was then functionalized with (3-aminopropyl)trimethoxysilane (APTMS), a widely used agent for functionalization. Glutaraldehyde and succinic anhydride were used in three different concentrations to activate the functionalized support. After each activation and subsequent enzyme immobilization on the activated MCF, the immobilization efficiency, enzyme activity and stability in the aldol addition reaction were measured. The immobilization efficiency, activity and stability were defined as follows: Immobilization was performed by mixing enzyme and phosphate buffer solution together with the activated support for 1.5 h. The immobilization efficiency was calculated by measuring the protein content of the supernatant using the Bradford protein assay. Activity was measured in the batch reactor and 1 U of DERA activity was defined as the amount of enzyme required to form 1 µmol of product per minute. To measure the free enzyme activity, the reaction solution contained 100 µL of aldehyde solution and 100 µL of enzyme solution (3 mg/mL enzyme, 100 mM acetaldehyde, 50 mM chloroacetaldehyde). During the first 3 min of the reaction, samples were taken at regular intervals and analysed by HPLC to quantify the product concentration. To measure the activity of the immobilized enzyme, 20 mg of the activated MCF with immobilized enzyme was mixed with 100 µL of buffer and 100 µL of aldehyde solution. The sampling procedure is the same as for the free enzyme, but samples were taken during the first 30 minutes. After 30 minutes, the support was washed 3x with buffer and used for stability measurement by mixing it again with 100 µL buffer and 100 µL aldehyde solution, and sampling for activity measurement was performed for 5 minutes. Once the optimal activating agent was confirmed, the influence of different pH and temperature values during the immobilization process on the subsequent activity of the immobilized enzyme and immobilization efficiency was measured.
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- 2022
159. Structure and mechanism of sulfofructose transaldolase, a key enzyme in sulfoquinovose metabolism.
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Snow, Alexander J.D., Sharma, Mahima, Abayakoon, Palika, Williams, Spencer J., Blaza, James N., and Davies, Gideon J.
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ENZYME metabolism , *FRUCTOSE , *SCHIFF bases , *BACILLUS megaterium , *DIHYDROXYACETONE , *SULFUR cycle , *MOLECULAR recognition - Abstract
Sulfoquinovose (SQ) is a key component of plant sulfolipids (sulfoquinovosyl diacylglycerols) and a major environmental reservoir of biological sulfur. Breakdown of SQ is achieved by bacteria through the pathways of sulfoglycolysis. The sulfoglycolytic sulfofructose transaldolase (sulfo-SFT) pathway is used by gut-resident firmicutes and soil saprophytes. After isomerization of SQ to sulfofructose (SF), the namesake enzyme catalyzes the transaldol reaction of SF transferring dihydroxyacetone to 3C/4C acceptors to give sulfolactaldehyde and fructose-6-phosphate or sedoheptulose-7-phosphate. We report the 3D cryo-EM structure of SF transaldolase from Bacillus megaterium in apo and ligand bound forms, revealing a decameric structure formed from two pentameric rings of the protomer. We demonstrate a covalent "Schiff base" intermediate formed by reaction of SF with Lys89 within a conserved Asp-Lys-Glu catalytic triad and defined by an Arg-Trp-Arg sulfonate recognition triad. The structural characterization of the signature enzyme of the sulfo-SFT pathway provides key insights into molecular recognition of the sulfonate group of sulfosugars. [Display omitted] • Sulfoquinovose (SQ) accounts for up to half of the global biosulfur cycle • The sulfoglycolytic sulfofructose transaldolase pathway enables catabolism of SQ • 2.1-Å cryo-EM structure of the sulfofructose transaldolase Schiff base intermediate • The catalytic mechanism involves an Asp-Lys-Glu triad Snow et al. present the high-resolution cryo-EM analysis of sulfofructose transaldolase, a key component of the sulfoglycolytic pathway. The analysis unveils the Schiff-based intermediate complex with sulfofructose and highlights the key residues involved in sulfonate recognition and specificity. [ABSTRACT FROM AUTHOR]
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- 2023
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160. NONHSAG028908.3 sponges miR‑34a‑5p to promote growth of colorectal cancer via targeting ALDOA.
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Wang C, Xin H, Yan G, and Liu Z
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- Humans, Cell Proliferation genetics, Cell Line, Tumor, Neoplasm Invasiveness genetics, Neoplasm Invasiveness pathology, Cell Movement genetics, Cell Transformation, Neoplastic genetics, Gene Expression Regulation, Neoplastic, Fructose-Bisphosphate Aldolase genetics, MicroRNAs metabolism, Colorectal Neoplasms pathology, RNA, Long Noncoding genetics, RNA, Long Noncoding metabolism
- Abstract
Colorectal cancer (CRC) is an aggressive tumor, whose development is considered to be modulated by certain long non‑coding RNAs (lncRNAs). Therefore, the aim of the present study was to investigate the regulatory mechanism of lncRNA NONHSAG028908.3 on CRC. Data from The Cancer Genome Atlas (TCGA) database revealed that NONHSAG028908.3 was increased in CRC tissues compared with normal tissues (P<0.001). The results of reverse transcription‑quantitative PCR indicated that NONHSAG028908.3 was upregulated in four types of CRC cells compared with that in NCM460, a normal colorectal cell line. MTT, BrdU, and flow cytometric assays were applied to evaluate CRC cell growth. The migratory and invasive abilities of CRC cells were detected using wound healing and Transwell assays. Silencing of NONHSAG028908.3 inhibited proliferation, migration, and invasion of CRC cells. A dual‑luciferase reporter assay demonstrated that NONHSAG028908.3 served as a sponge to combine with microRNA (miR)‑34a‑5p. MiR‑34a‑5p suppressed the aggressiveness of CRC cells. The effects induced by NONHSAG028908.3 knockdown were partly reversed by inhibition of miR‑34a‑5p. Furthermore, miR‑34a‑5p, a target of NONHSAG028908.3, modulated aldolase, fructose‑bisphosphate A (ALDOA) expression in a negative feedback manner. Suppression of NONHSAG028908.3 notably decreased ALDOA expression, which was rescued via silencing of miR‑34a‑5p. Moreover, suppression of ALDOA revealed the inhibitory action on CRC cell growth and migration. In summary, the data of the present study indicate that NONHSAG028908.3 may positively regulate ALDOA via sponging miR‑34a‑5p, thereby promoting malignant activities in CRC.
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- 2023
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161. EFFECT OF PLASMAPHERESIS AND PASSAGE OF ANTI-RETINAL ANTIBODIES THROUGH THE PLACENTA IN A CASE OF NON-PARANEOPLASTIC AUTOIMMUNE RETINOPATHY.
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Sierpina, David I., Skale, David M., and Fan, Joseph T.
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Purpose: To present a case of nonparaneoplastic autoimmune retinopathy in association with myasthenia gravis in a young woman, and to report the effect of plasmapheresis as well as passage of antiretinal antibodies through the placenta. Methods: Case report. Results: A 31-year-old woman presented with a history of myasthenia gravis and rapidly progressive vision loss at the age of 23. Funduscopic appearance and fluorescein angiographic findings on presentation were consistent with an autoimmune retinopathy. Paraneoplastic etiology was ruled out, and antiretinal antibody testing revealed positivity for autoantibodies against GAPDH, aldolase, enolase, arrestin, as well as unnamed 48-kDa and 60-kDa proteins. ARA Western Blot and immunohistochemistry profiles were unchanged by either plasmapheresis therapy or passage of serum through the maternal placenta. However, the patient's 6-month and 8-year-old daughters appeared unaffected. Conclusion: This is the first report of nonparaneoplastic autoimmune retinopathy associated with myasthenia gravis, although a strong history of autoimmune disorders is a known risk factor. Our patient's antiretinal antibody panel was unaffected immediately after plasmapheresis treatment. Antibodies to GAPDH and unnamed 38-kDa and 86-kDa proteins were able to pass through the placenta into the fetal circulation, although their effect on the growing fetus is not clear. [ABSTRACT FROM AUTHOR]
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- 2017
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162. Cross-reactivity to fish and chicken meat - a new clinical syndrome.
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Kuehn, A., Codreanu‐Morel, F., Lehners‐Weber, C., Doyen, V., Gomez‐André, S.‐A., Bienvenu, F., Fischer, J., Ballardini, N., Hage, M., Perotin, J.‐M., Silcret‐Grieu, S., Chabane, H., Hentges, F., Ollert, M., Hilger, C., and Morisset, M.
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ALLERGY treatment , *FOOD allergy , *FISH as food -- Health aspects , *NUTRITIONAL value of meat , *CROSS reactions (Immunology) , *PARVALBUMINS - Abstract
Background Fish is one of the most allergenic foods. While clinical cross-reactivity among different fishes is a widely accepted feature of fish allergy, associations with other food allergies are not well understood. This study aims at analyzing the relevance of clinical cross-reactivity between fish and chicken meat in patients with allergy to chicken meat without sensitization to hen's eggs. Methods Patients with food allergy to fish and chicken meat ( n = 29) or chicken meat only ( n = 7) were recruited. IgE-reactive chicken proteins were identified (Edman, MS analysis) and quantified ( ELISA). Allergens were used in IgE ELISA and skin testing. Results Chicken parvalbumin and two new allergens, aldolase and enolase, were identified at 12, 40, and 50 kDa, respectively. They were recognized by sIgE of 61%, 75%, and 83% of all patient sera which were in the majority of the cases positive for the fish homologues as well. Fish and chicken meat allergens were highly cross-reactive while high inhibition rates with fish or chicken allergens correlated with the patients' primary sensitization to fish or chicken. In cooked or roasted foods, enolase and aldolase were detectable in chicken breast while parvalbumin was detectable in chicken legs and wings. Conclusions Fish and chicken meat are cross-reactive foods; both fish-allergic and chicken meat-allergic patients might be at risk of developing a food allergy to chicken meat or to fish, respectively. This clinical phenomenon is proposed to be termed 'fish-chicken syndrome' with cross-reactive allergens involved being parvalbumins, enolases, and aldolases. [ABSTRACT FROM AUTHOR]
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- 2016
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163. Isolation, characterization, and identification of proteins interfering with enzyme-linked immunosorbent assay of antibiotics in fish matrix.
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Wang, Xiudan, Lin, Hong, Cao, Limin, Zheng, Hongwei, Cui, Mengqi, Du, Shuyuan, and Sui, Jianxin
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The interaction between some proteins and immune globulin has been confirmed as an important source of matrix interference with the immunoassay of fishery products, but detailed biochemical properties of these proteins have not been indicated. Two interference-inducing proteins (42 and 36 kD) in flounder were isolated, characterized, and identified. Their influences on the immunoassay of norfloxacin were confirmed by western blotting and enzyme-linked immunosorbent assay. The pI value and pH stability of the two proteins were also investigated. Using LC-MS/MS, the two proteins were identified as fructose-bisphosphate aldolase, and such results were partly verified by the aldolase activity of the 42 and 36 kD isolates. Considering the prevalence of these proteins (as multi-functional aldolase of muscles) in foods, these results would help to further understand the matrix effects in various immunoassays as well as the development of effective techniques to improve the efficiency of immunoassays. [ABSTRACT FROM AUTHOR]
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- 2016
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164. Electrochemical biosensor based on enzyme substrate as a linker: Application for aldolase activity with pectin-thionine complex as recognization element and signal amplification probe.
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Wang, Xiaonan, Wang, Meiwen, Zhang, Yuanyuan, Miao, Xiaocao, Huang, Yuanyuan, Zhang, Juan, and Sun, Lizhou
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ALDOLASES , *BIOSENSORS , *AMINOPHENOLS , *GENE amplification , *MAGNETIC nanoparticles - Abstract
A new strategy to fabricate electrochemical biosensor is reported based on the linkage of enzyme substrate, thereby an electrochemical method to detect aldolase activity is established using pectin-thionine complex (PTC) as recognization element and signal probe. The linkage effect of fructose-1,6-bisphosphate (FBP), the substrate of aldolase, can be achieved via its strong binding to magnetic nanoparticles (MNPs)/aminophenylboronic acid (APBA) and the formation of phosphoramidate bond derived from its reaction with p -phenylenediamine (PDA) on the surface of electrode. Aldolase can reversibly catalyze the substrates into the products which have no binding capacity with MNPs/APBA, resulting in the exposure of the corresponding binding sites and its subsequent recognization on signal probe. Meanwhile, signal amplification can be accomplished by using the firstly prepared PTC which can bind with MNPs/APBA, and accuracy can be strengthened through magnetic separation. With good precision and accuracy, the established sensor may be extended to other proteins with reversible catalyzed ability. [ABSTRACT FROM AUTHOR]
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- 2016
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165. Altered Erythrocyte Glycolytic Enzyme Activities in Type-II Diabetes.
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Mali, Aniket, Bhise, Sunita, Hegde, Mahabaleshwar, and Katyare, Surendra
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The activity of enzymes of glycolysis has been studied in erythrocytes from type-II diabetic patients in comparison with control. RBC lysate was the source of enzymes. In the diabetics the hexokinase (HK) activity increased 50 % while activities of phosphoglucoisomerase (PGI), phosphofructokinase (PFK) and aldolase (ALD) decreased by 37, 75 and 64 % respectively but were still several folds higher than that of HK. Hence, it is possible that in the diabetic erythrocytes the process of glycolysis could proceed in an unimpaired or in fact may be augmented due to increased levels of G6P. The lactate dehydrogenase (LDH) activity was comparatively high in both the groups; the diabetic group showed 85 % increase. In control group the HK, PFK and ALD activities showed strong positive correlation with blood sugar level while PGI activity did not show any correlation. In the diabetic group only PFK activity showed positive correlation. The LDH activity only in the control group showed positive correlation with marginal increase with increasing concentrations of glucose. [ABSTRACT FROM AUTHOR]
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- 2016
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166. An Enantio- and Diastereoselective Chemoenzymatic Synthesis of α-Fluoro β-Hydroxy Carboxylic Esters.
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Howard, James K., Müller, Marion, Berry, Alan, and Nelson, Adam
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ESTERS , *CHEMICAL synthesis , *ENANTIOSELECTIVE catalysis , *STEREOSELECTIVE reactions , *ENZYMATIC analysis , *CARBOXYLIC acids - Abstract
The trans-o-hydroxybenzylidene pyruvate aldolase-catalysed reactions between fluoropyruvate and many (hetero)aromatic aldehydes yield aldol adducts without subsequent dehydration. Treatment of the reaction products with hydrogen peroxide yields the corresponding syn-configured α-fluoro β-hydroxy carboxylic acids which have >98 % ee. The overall chemoenzymatic approach, in which fluoropyruvate serves as a fluoroacetate equivalent, may be exploited in the synthesis of polar building blocks and fragments with potential value in drug discovery. [ABSTRACT FROM AUTHOR]
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- 2016
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167. Cellular degradation of 4-hydroxy-2-oxoglutarate aldolase leads to absolute deficiency in primary hyperoxaluria type 3.
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MacDonald, Julia R., Huang, Amadeus D., and Loomes, Kerry M.
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ALDOLASES , *OXALURIA , *GENETIC mutation , *PROTEASOME inhibitors , *PROTEIN expression , *GENETICS - Abstract
Primary hyperoxaluria type-3 is characterized by increased oxalate production caused by mutations in the HOGA1 gene encoding 4-hydroxy-2-oxoglutarate aldolase (HOGA1). How the most commonly occurring mutations affect the cellular fates of the expressed HOGA1 mutants is still unknown. We show that two prevalent recombinant HOGA1 mutants are thermally unstable with evidence for chaperone-mediated degradation when expressed in E. coli. In stably transformed HEK-293 cells, protein expression of the Glu315 deletion mutant only becomes detectable during incubation with a 26S proteasome inhibitor. These findings suggest that failure of chaperone-assisted folding leads to targeted cellular degradation and an absolute absence of HOGA1 function. [ABSTRACT FROM AUTHOR]
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- 2016
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168. Excretion of cytoplasmic proteins in Staphylococcus is most likely not due to cell lysis.
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Ebner, Patrick, Rinker, Janina, and Götz, Friedrich
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STAPHYLOCOCCUS , *MICROCOCCACEAE , *PROTEOMICS , *BIOSYNTHESIS , *SECRETION - Abstract
The excretion of cytoplasmic proteins (ECP) is a long-known phenomenon in bacteria and eukaryotes. So far, it was not possible to associate either a signal peptide-dependent or a signal peptide-independent pathway to ECP. Nevertheless 25 % of the proteins found in Staphylococcus aureus supernatants were cytoplasmic proteins. Because the excreted proteins do not possess a common motive, the most widespread opinion is that ECP is due to cell lysis. This explanation seems to be too easy since several indications imply that there exists a yet unknown mechanism for ECP. Certainly, the up-regulation of autolysins as well as decreased peptidoglycan cross-linking increased ECP. However, in recent years, several evidences arose that cell lysis is not the only reason for ECP. It seems that ECP is a part of the normal cell cycle of S. aureus as it turned out that ECP with several model proteins occurs mainly during cell growth. It has common features as proteins secreted via the Sec translocon and finally the excretion site is the cross wall of dividing cells. [ABSTRACT FROM AUTHOR]
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- 2016
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169. One Step Forward in Exploration of Class II Pyruvate Aldolases Nucleophile and Electrophile Substrate Specificity
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Christine Guérard-Hélaine, Véronique de Berardinis, Cédric Gastaldi, Marielle Lemaire, Rolande Ngahan Tagne, Jean-Louis Petit, Victor Laurent, Mounir Traïkia, Virgil Hélaine, Institut de Chimie de Clermont-Ferrand (ICCF), Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)-Université Clermont Auvergne (UCA)-Institut national polytechnique Clermont Auvergne (INP Clermont Auvergne), Université Clermont Auvergne (UCA)-Université Clermont Auvergne (UCA), Génomique métabolique (UMR 8030), Genoscope - Centre national de séquençage [Evry] (GENOSCOPE), Université Paris-Saclay-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université d'Évry-Val-d'Essonne (UEVE)-Centre National de la Recherche Scientifique (CNRS), and Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)
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Class (set theory) ,biology ,biocatalysis ,010405 organic chemistry ,Stereochemistry ,Chemistry ,Organic Chemistry ,Aldolase A ,specificity ,One-Step ,010402 general chemistry ,01 natural sciences ,Catalysis ,0104 chemical sciences ,2- oxopentanoate ,Inorganic Chemistry ,aldolase ,Nucleophile ,Biocatalysis ,Electrophile ,biology.protein ,Substrate specificity ,[CHIM]Chemical Sciences ,Physical and Theoretical Chemistry ,biodiversity - Abstract
International audience; Originally named according to their strict nucleophile specificity towards pyruvate, some pyruvate aldolases were demonstrated to be able to convert other nucleophiles. This study illustrates that the nucleophile 2-oxopentanoate successfully reacted with various aldehydes and even ketones. Unknown aldols with a 3S configuration were then isolated, characterized, and their stereochemistries could be set as either 4R or 4S by choosing the appropriate aldolase.
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- 2021
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170. A case for glycerol as an acceptable additive for single-particle cryoEM samples
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Benjamin Basanta, Marscha M. Hirschi, Danielle A. Grotjahn, and Gabriel C. Lander
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Glycerol ,Models, Molecular ,Protein Folding ,Cryoelectron Microscopy ,sample buffer ,Buffers ,Research Papers ,cryoEM ,Mice ,aldolase ,Structural Biology ,Fructose-Bisphosphate Aldolase ,Apoferritins ,Animals ,Rabbits ,apoferritin - Abstract
It is shown that the inclusion of glycerol in single-particle cryoEM buffers does not preclude high-resolution structure determination, as demonstrated by an ∼2.3 Å resolution reconstruction of mouse apoferritin (∼500 kDa) and an ∼3.3 Å resolution reconstruction of rabbit muscle aldolase (∼160 kDa) in the presence of 20%(v/v) glycerol., Buffer-composition and sample-preparation guidelines for cryo-electron microscopy are geared towards maximizing imaging contrast and reducing electron-beam-induced motion. These pursuits often involve the minimization or the complete removal of additives that are commonly used to facilitate proper protein folding and minimize aggregation. Among these admonished additives is glycerol, a widely used osmolyte that aids protein stability. In this work, it is shown that the inclusion of glycerol does not preclude high-resolution structure determination by cryoEM, as demonstrated by an ∼2.3 Å resolution reconstruction of mouse apoferritin (∼500 kDa) and an ∼3.3 Å resolution reconstruction of rabbit muscle aldolase (∼160 kDa) in the presence of 20%(v/v) glycerol. While it was found that generating thin ice that is amenable to high-resolution imaging requires long blot times, the addition of glycerol did not result in increased beam-induced motion or an inability to pick particles. Overall, these findings indicate that glycerol should not be discounted as a cryoEM sample-buffer additive, particularly for large, fragile complexes that are prone to disassembly or aggregation upon its removal.
- Published
- 2021
171. Data from Shanghai Jiao Tong University Provide New Insights into Life Science (Discovery and Engineering of the L-threonine Aldolase From Neptunomonas Marine for the Efficient Synthesis of Ss-hydroxy-alpha-amino Acids Via C-c Formation).
- Abstract
Keywords: Shanghai; People's Republic of China; Asia; Life Science; Aldolase; Amino Acids; Engineering; Enzymes and Coenzymes; Essential Amino Acids; Health and Medicine; Mutagenesis; Neutral Amino Acids; Peptides; Proteins; Threonine EN Shanghai People's Republic of China Asia Life Science Aldolase Amino Acids Engineering Enzymes and Coenzymes Essential Amino Acids Health and Medicine Mutagenesis Neutral Amino Acids Peptides Proteins Threonine 1162 1162 1 07/24/23 20230728 NES 230728 2023 JUL 28 (NewsRx) -- By a News Reporter-Staff News Editor at Health & Medicine Week -- New research on Life Science is the subject of a report. Keywords for this news article include: Shanghai, People's Republic of China, Asia, Life Science, Aldolase, Amino Acids, Engineering, Enzymes and Coenzymes, Essential Amino Acids, Health and Medicine, Mutagenesis, Neutral Amino Acids, Peptides, Proteins, Threonine, Shanghai Jiao Tong University. Shanghai, People's Republic of China, Asia, Life Science, Aldolase, Amino Acids, Engineering, Enzymes and Coenzymes, Essential Amino Acids, Health and Medicine, Mutagenesis, Neutral Amino Acids, Peptides, Proteins, Threonine. [Extracted from the article]
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- 2023
172. Data on Parasitology Reported by Researchers at Hebei Normal University [Molecular Characterization and Immune Efficacy of Fructose-1,6-bisphosphate Aldolase From Haemaphysalis Longicornis (Acari: Ixodidae)].
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Shijiazhuang, People's Republic of China, Asia, Parasitology, Life Sciences, Aldolase, Enzymes and Coenzymes, Risk and Prevention Keywords: Shijiazhuang; People's Republic of China; Asia; Parasitology; Life Sciences; Aldolase; Enzymes and Coenzymes; Risk and Prevention EN Shijiazhuang People's Republic of China Asia Parasitology Life Sciences Aldolase Enzymes and Coenzymes Risk and Prevention 1628 1628 1 07/17/23 20230721 NES 230721 2023 JUL 21 (NewsRx) -- By a News Reporter-Staff News Editor at Health & Medicine Week -- Fresh data on Life Sciences - Parasitology are presented in a new report. [Extracted from the article]
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- 2023
173. Findings from Weill Cornell Medical College Yields New Findings on Dermatomyositis (Association of Juvenile Dermatomyositis Disease Activity With the Expansion of Blood Memory B and T Cell Subsets Lacking Follicular Markers).
- Abstract
New York City, State:New York, United States, North and Central America, Aldolase, Biomarkers, Dermatomyositis, Diagnostics and Screening, Enzymes and Coenzymes, Genetics, Health and Medicine, Muscular Diseases and Conditions, Musculoskeletal Diseases and Conditions, Nervous System Diseases and Conditions, Neuromuscular Diseases and Conditions, Polymyositis, Rheumatology, Skin Diseases and Conditions, Skin and Connective Tissue Diseases and Conditions Keywords: New York City; State:New York; United States; North and Central America; Aldolase; Biomarkers; Dermatomyositis; Diagnostics and Screening; Enzymes and Coenzymes; Genetics; Health and Medicine; Muscular Diseases and Conditions; Musculoskeletal Diseases and Conditions; Nervous System Diseases and Conditions; Neuromuscular Diseases and Conditions; Polymyositis; Rheumatology; Skin Diseases and Conditions; Skin and Connective Tissue Diseases and Conditions EN New York City State:New York United States North and Central America Aldolase Biomarkers Dermatomyositis Diagnostics and Screening Enzymes and Coenzymes Genetics Health and Medicine Muscular Diseases and Conditions Musculoskeletal Diseases and Conditions Nervous System Diseases and Conditions Neuromuscular Diseases and Conditions Polymyositis Rheumatology Skin Diseases and Conditions Skin and Connective Tissue Diseases and Conditions 492 492 1 07/17/23 20230721 NES 230721 2023 JUL 21 (NewsRx) -- By a News Reporter-Staff News Editor at Genomics & Genetics Weekly -- Fresh data on Musculoskeletal Diseases and Conditions - Dermatomyositis are presented in a new report. [Extracted from the article]
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- 2023
174. Researchers Submit Patent Application, "Substituted Imidazole Salt Compounds, Preparation Method Thereof, Pharmaceutical Composition Thereof And Application Thereof", for Approval (USPTO 20230202986).
- Subjects
PATENT applications ,PATENT offices ,IMIDAZOLES ,FIREPROOFING agents ,SALT ,ORGANIC acids - Abstract
The method according to claim 1, wherein for R2 is selected from H, C1-C4 alkyl, C3 cycloalkyl; or R2 is selected from H, methyl, ethyl, isopropyl, t-butyl, cyclopropyl. The method according to claim 1, wherein for R1 is selected from C1-C24 alkyl; or R1 is selected from C1-C22 alkyl. [Extracted from the article]
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- 2023
175. AMPK Drives Both Glycolytic and Oxidative Metabolism in T Cells During Graft-versus-host Disease.
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- 2023
176. Recent Progress in the Development of Diagnostic Tests for Malaria
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Francis D. Krampa, Yaw Aniweh, Gordon A. Awandare, and Prosper Kanyong
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rapid diagnostic tests (RDT) ,biosensing ,lateral flow assays ,Plasmodium spp. ,multiplex biomarker detection ,histidine-rich protein 2 (HRP2) ,lactate dehydrogenase (LDH) ,aldolase ,point-of-care tests (POCT) ,disposal medical devices ,infectious diseases ,Medicine (General) ,R5-920 - Abstract
The impact of malaria on global health has continually prompted the need to develop effective diagnostic strategies. In malaria endemic regions, routine diagnosis is hampered by technical and infrastructural challenges to laboratories. These laboratories lack standard facilities, expertise or diagnostic supplies; thus, therapy is administered based on clinical or self-diagnosis. There is the need for accurate diagnosis of malaria due to the continuous increase in the cost of medication, and the emergence and spread of drug resistant strains. However, the widely utilized Giemsa-stained microscopy and immunochromatographic tests for malaria are liable to several drawbacks, including inadequate sensitivity and false-positive outcomes. Alternative methods that offer improvements in performance are either expensive, have longer turnaround time or require a level of expertise that makes them unsuitable for point-of-care (POC) applications. These gaps necessitate exploration of more efficient detection techniques with the potential of POC applications, especially in resource-limited settings. This minireview discusses some of the recent trends and new approaches that are seeking to improve the clinical diagnosis of malaria.
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- 2017
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177. Fish allergens at a glance: Variable allergenicity of parvalbumins, the major fish allergens
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Annette eKuehn, Ines eSwoboda, Karthik eArumugam, Christiane eHilger, and François eHentges
- Subjects
parvalbumin ,isoforms ,food allergy ,aldolase ,Allergenicity ,enolase ,Immunologic diseases. Allergy ,RC581-607 - Abstract
Fish is a common trigger of severe, food-allergic reactions. Only a limited number of proteins induce specific IgE-mediated immune reactions. The major fish allergens are the parvalbumins. They are members of the calcium-binding EF-hand protein family characterized by a conserved protein structure. They represent highly cross-reactive allergens for patients with specific IgE to conserved epitopes. These patients might experience clinical reactions with various fish species. On the other hand, some individuals have IgE antibodies directed against unique, species-specific parvalbumin epitopes, and these patients show clinical symptoms only with certain fish species. Furthermore, different parvalbumin isoforms and isoallergens are present in the same fish and might display variable allergenicity. This was shown for salmon homologs, where only a single parvalbumin (beta-1) isoform was identified as allergen in specific patients. In addition to the parvalbumins, several other fish proteins, enolases, aldolases and fish gelatin, seem to be important allergens.New clinical and molecular insights advanced the knowledge and understanding of fish allergy in the last years. These findings will be useful for the advancement of the IgE-based diagnosis but also for the management of fish allergies consisting of advice and treatment of fish-allergic patients.
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- 2014
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178. Thermodynamic Effects in Enzyme Regulation, Stereochemistry and Process Control
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Marsden, S.R. (author) and Marsden, S.R. (author)
- Abstract
Thiamine diphosphate dependent enzymes are excellent catalysts for the asymmetric synthesis of the α-hydroxyketone (acyloin) structural motif, which is found in many pharmaceuticals and fine chemicals. In chapter 2, variants of transketolase from Saccharomyces cerevisiae were screened for the conversion of aliphatic aldehydes with hydroxypyruvate as donor substrate. The formation of a new hydrogen bond network was observed in the most successful variant D477E, which allowed for the accommodation of hydrophobic aldehydes within the enzyme’s polar active site. Decarboxylation of hydroxypyruvate was shown to render the carboligation reaction kinetically controlled, correcting the preceding notion of an irreversible conversion of substrates in literature., BT/Biocatalysis
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- 2021
179. Multi-reaction kinetic modeling for the peroxidase-aldolase cascade synthesis of a D-fagomine precursor
- Author
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Masdeu, Gerard, Findrik Blažević, Zvjezdana, Kralj, Slavko, Makovec, Darko, López Santín, Josep, Álvaro, Gregorio, Masdeu, Gerard, Findrik Blažević, Zvjezdana, Kralj, Slavko, Makovec, Darko, López Santín, Josep, and Álvaro, Gregorio
- Abstract
Altres ajuts: Acord transformatiu CRUE-CSIC, The feasibility of a peroxidase-aldolase cascade reaction for the synthesis of therapeutically-valuable iminocyclitols is discussed herein. A two-enzyme system consisting of chloroperoxidase (CPO) and D-fructose-6-phosphate aldolase (FSA) was evaluated for the synthesis of a D-fagomine precursor (preFagomine) from a N-Cbz-3-aminopropanol. An in-depth, systematic, step-by-step kinetic modeling of seven reactions and two inactivation decays was proposed to elucidate the reaction mechanism, prepare suitable stabilized biocatalysts, and find the optimal conditions for its application. The model described accurately the data and predicted the outcome at different experimental conditions. The inactivation of FSA caused by CPO was identified as the main bottleneck in the reaction. A two-step reaction approach and the use of immobilized enzymes on magnetic nanoparticle clusters and functionalized agarose carriers increased the stability of FSA, with an 1839-fold higher preFagomine formation per mol of enzyme in comparison to a one-pot reaction using soluble enzymes.
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- 2021
180. Thermodynamics Determine the Diastereochemical Outcome of Catalytic Reactions
- Author
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Marsden, S.R. (author), Mestrom, L. (author), Wijma, Hein J. (author), Noordam, Sander J. (author), McMillan, D.G.G. (author), Hanefeld, U. (author), Marsden, S.R. (author), Mestrom, L. (author), Wijma, Hein J. (author), Noordam, Sander J. (author), McMillan, D.G.G. (author), and Hanefeld, U. (author)
- Abstract
Diastereomers are characterised by an intrinsic energy difference, and thermodynamics dictate their distribution within a dynamic equilibrium. The characteristic mechanistic reversibility and non-ideal stereoselectivity of catalysts therefore simultaneously promote both synthesis and epimerization of products during the formation of diastereomers. This feature can even result in the thermodynamic inversion of a chiral centre against the catalyst's stereoselectivity. Here, we provide a comprehensive experimental and theoretical study of factors that govern thermodynamic epimerization in catalysis, using enzymes as example. Our analysis highlights, that the deduction of a catalyst's stereoselectivity based on the absolute configuration of the isolated product constitutes a potential pitfall. The selective formation of either the thermodynamic-, or the kinetic product is less determined by the catalyst, but rather by the reaction conditions. Next to low temperatures, a high maximal extent of conversion was identified to promote kinetically controlled conditions. For bimolecular reactions, conversions can be conveniently modulated via the use of one substrate in excess. Quantum mechanical calculations accurately predicted the diastereomeric excess under equilibrium conditions, which opens the prospect of a rational choice between thermodynamic and kinetic reaction control at an early stage of process design. Our findings are of critical importance for multi-step syntheses of stereocomplex molecules via catalytic cascade reactions or artificial metabolic pathways, as the final stereochemistry may be determined by the absolute configuration of the product that is overall lowest in energy., BT/Biocatalysis
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- 2021
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181. Design, production and evaluation of cross linked target proteins to an affibody-based carrier framework aimed for affinity protein: antigen structure determination using single particle Cryo-EM
- Author
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Brunsell, Richard and Brunsell, Richard
- Abstract
Small proteins are difficult to study at high resolution with single-particle cryo-electron microscopy (cryo-EM). In general, sample properties such as large size (> 80 kDa), symmetry and rigidity are key to utilize this technology. To facilitate structural studies of small proteins as well, using cryo-EM, this project aims to incorporate a photo-inducible cross-link in a large and symmetric scaffold that is amenable for study, and covalently bind small proteins of interest to this scaffold. The scaffold in this project consists of rabbit muscle aldolase (157 kDa in tetrameric state) with an engineered affibody affinity protein (7 kDa) attached to the N-terminus of each aldolase monomer via a rigid helix fusion. The affibody-domain of the scaffold will be cross-linked to small proteins of structural interest, with a focus on a model target consisting of a second affibody with affinity for the affibody displayed on the aldolase scaffold. Photoconjugation of the affibody Zwt was performed to crosslink both the Fc of IgG and the anti-idiotypic affibody Z963, revealing that a methionine acceptor in the target is preferable but not necessary for UV crosslinking using BPA. Binding of affibodies rigidly displayed on of the scaffold to targets such as affibodies and antibody fragments was demonstrated , using surface plasmon resonance (SPR)., Att studera små protein vid hög upplösning med enpartikelsrekonstruktion i kryo-elektronmikroskopi (kryo-EM) är utmanande. Generellt så krävs stora (> 80 kDa), symmetriska och stabila protein för att använda sig av kryo-EM. Med målet att möjliggöra strukturbestämning och strukturella studier av små protein, så ska detta projekt föra in en foto-aktiverad korslänk i ett stort och symmetriskt bärarprotein. Bäraren består av aldolas från kaninmuskel (157 kDa som tetramer) med en affibody (7 kDa) kopplad till N-terminalen av varje aldolas-monomer via en rigidt fuserad helix. Affibody-domänen av bärarproteinet kan bilda korslänkar till små protein vars struktur sedan kan studeras. Fokus i projektet är ett modellprotein som består av en annan affibody som binder den affibody i bäraren. Fotokonjugering av affibodyn Zwt utfördes för att skapa korslänkar till både Fc av IgG, samt den anti-idiotypiska affibodyn Z963, vilket påvisade att en metionin-mottagare i målproteinet är fördelaktigt för UV korslänkning med BPA, men inte ett krav. Affinitet av affibodies i bärarproteinet till målprotein såsom andra affibodies och antikroppsfragment påvisades.
- Published
- 2021
182. Thermostability Engineering of a Class II Pyruvate Aldolase from Escherichia coli by in Vivo Folding Interference
- Author
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Ministerio de Economía y Competitividad (España), Fundación Ramón Areces, Banco Santander, Bosch, Sandra, Sanchez-Freire, Esther, del Pozo, María Luisa, Cesnik, Morana, Quesada, Jaime, Maté, Diana M., Hernández, Karel, Qi, Yuyin, Clapés, Pere, Vasic-Racki, Durda, Findrik Blažević, Zvjezdana, Ministerio de Economía y Competitividad (España), Fundación Ramón Areces, Banco Santander, Bosch, Sandra, Sanchez-Freire, Esther, del Pozo, María Luisa, Cesnik, Morana, Quesada, Jaime, Maté, Diana M., Hernández, Karel, Qi, Yuyin, Clapés, Pere, Vasic-Racki, Durda, and Findrik Blažević, Zvjezdana
- Abstract
The use of enzymes in industrial processes is often limited by the unavailability of biocatalysts with prolonged stability. Thermostable enzymes allow increased process temperature and thus higher substrate and product solubility, reuse of expensive biocatalysts, resistance against organic solvents, and better "evolvability"of enzymes. In this work, we have used an activity-independent method for the selection of thermostable variants of any protein in Thermus thermophilus through folding interference at high temperature of a thermostable antibiotic reporter protein at the C-terminus of a fusion protein. To generate a monomeric folding reporter, we have increased the thermostability of the moderately thermostable Hph5 variant of the hygromycin B phosphotransferase from Escherichia coli to meet the method requirements. The final Hph17 variant showed 1.5 °C higher melting temperature (Tm) and 3-fold longer half-life at 65 °C compared to parental Hph5, with no changes in the steady-state kinetic parameters. Additionally, we demonstrate the validity of the reporter by stabilizing the 2-keto-3-deoxy-l-rhamnonate aldolase from E. coli (YfaU). The most thermostable multiple-mutated variants thus obtained, YfaU99 and YfaU103, showed increases of 2 and 2.9 °C in Tm compared to the wild-type enzyme but severely lower retro-aldol activities (150- and 120-fold, respectively). After segregation of the mutations, the most thermostable single variant, Q107R, showed a Tm 8.9 °C higher, a 16-fold improvement in half-life at 60 °C and higher operational stability than the wild-type, without substantial modification of the kinetic parameters.
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- 2021
183. Recent Advances in the Substrate Selectivity of Aldolases
- Author
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Ministerio de Ciencia e Innovación (España), 0000-0001-5541-4794, 0000-0002-2311-7514, Hélaine, Virgil, Gastaldi, Cédric, Lemaire, Marielle, Clapés Saborit, Pere, Guérard-Hélaine, Christine, Ministerio de Ciencia e Innovación (España), 0000-0001-5541-4794, 0000-0002-2311-7514, Hélaine, Virgil, Gastaldi, Cédric, Lemaire, Marielle, Clapés Saborit, Pere, and Guérard-Hélaine, Christine
- Abstract
Aldolases are powerful C-C bond-forming enzymes in biocatalysis because of their unparalleled stereoselectivity, the ease with which reactions that do not require cofactor recycling can be set up, the large number of different types and families available, and reaction feasibility under mild operating conditions. Since 2016, major discoveries have been made that broaden the scope of both nucleophile and electrophile substrates. For instance, more hydrophobic, sterically hindered nucleophile components have led to structures that are difficult to synthesize with purely chemical procedures. Likewise, the use of structurally diverse ketones as electrophiles has allowed the stereoselective synthesis of tertiary alcohols. These major advances will be presented and discussed in this Review.
- Published
- 2021
184. Changes in Calprotectin (S100A8-A9) and Aldolase in the Saliva of Horses with Equine Gastric Ulcer Syndrome.
- Author
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Muñoz-Prieto A, Contreras-Aguilar MD, Cerón JJ, Ayala de la Peña I, Martín-Cuervo M, Eckersall PD, Holm Henriksen IM, Tecles F, and Hansen S
- Abstract
Equine gastric ulcer syndrome (EGUS) is a highly prevalent disease that affects horses worldwide. Within EGUS, two different forms have been described: equine squamous gastric disease (ESGD) and equine glandular gastric disease (EGGD). The associated clinical signs cause detrimental activity performance, reducing the quality of life of animals. Saliva can contain biomarkers for EGUS that could be potentially used as a complementary tool for diagnosis. The objective of this work was to evaluate the measurements of calprotectin (CALP) and aldolase in the saliva of horses as potential biomarkers of EGUS. For this purpose, automated assays for the quantification of these two proteins were analytically validated and applied for detecting EGUS in a total of 131 horses divided into 5 groups: healthy horses, ESGD, EGGD, combined ESGD and EGGD, and horses with other intestinal pathologies. The assays showed good precision and accuracy in analytical validation, and they were able to discriminate between horses with EGUS and healthy horses, especially in the case of CALP, although they did not show significant differences between horses with EGUS and horses with other diseases. In conclusion, salivary CALP and aldolase can be determined in the saliva of horses and further studies are warranted to elucidate the potential of these analytes as biomarkers in EGUS.
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- 2023
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185. A Manganese-independent Aldolase Enables Staphylococcus aureus To Resist Host-imposed Metal Starvation.
- Author
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Párraga Solórzano PK, Bastille TS, Radin JN, and Kehl-Fie TE
- Subjects
- Animals, Mice, Fructose-Bisphosphate Aldolase genetics, Fructose-Bisphosphate Aldolase metabolism, Staphylococcus aureus metabolism, Isoenzymes metabolism, Metals metabolism, Bacteria metabolism, Aldehyde-Lyases metabolism, Manganese metabolism, Staphylococcal Infections microbiology
- Abstract
The preferred carbon source of Staphylococcus aureus and many other pathogens is glucose, and its consumption is critical during infection. However, glucose utilization increases the cellular demand for manganese, a nutrient sequestered by the host as a defense against invading pathogens. Therefore, bacteria must balance glucose metabolism with the increasing demand that metal-dependent processes, such as glycolysis, impose upon the cell. A critical regulator that enables S. aureus to resist nutritional immunity is the ArlRS two-component system. This work revealed that ArlRS regulates the expression of FdaB, a metal-independent fructose 1,6-bisphosphate aldolase. Further investigation revealed that when S. aureus is metal-starved by the host, FdaB functionally replaces the metal-dependent isozyme FbaA, thereby allowing S. aureus to resist host-imposed metal starvation in culture. Although metal-dependent aldolases are canonically zinc-dependent, this work uncovered that FbaA requires manganese for activity and that FdaB protects S. aureus from manganese starvation. Both FbaA and FdaB contribute to the ability of S. aureus to cause invasive disease in wild-type mice. However, the virulence defect of a strain lacking FdaB was reversed in calprotectin-deficient mice, which have defects in manganese sequestration, indicating that this isozyme contributes to the ability of this pathogen to overcome manganese limitation during infection. Cumulatively, these observations suggest that the expression of the metal-independent aldolase FdaB allows S. aureus to alleviate the increased demand for manganese that glucose consumption imposes, and highlights the cofactor flexibility of even established metalloenzyme families. IMPORTANCE Staphylococcus aureus and other pathogens consume glucose during infection. Glucose utilization increases the demand for transition metals, such as manganese, a nutrient that the host limits as a defense mechanism against invading pathogens. Therefore, pathogenic bacteria must balance glucose and manganese requirements during infection. The two-component system ArlRS is an important regulator that allows S. aureus to adapt to both glucose and manganese starvation. Among the genes regulated by ArlRS is the metal-independent fructose 1,6-bisphosphate aldolase fdaB , which functionally substitutes for the metal-dependent isoenzyme FbaA and enables S. aureus to survive host-imposed manganese starvation. Unexpectedly, and differing from most characterized metal-dependent aldolases, FbaA requires manganese for activity. Cumulatively, these findings reveal a new mechanism for overcoming nutritional immunity as well as the cofactor plasticity of even well-characterized metalloenzyme families.
- Published
- 2023
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186. A Type 1 Aldolase, NahE, Catalyzes a Stereoselective Nitro-Michael Reaction: Synthesis of β-Aryl-γ-nitrobutyric Acids.
- Author
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Fansher DJ and Palmer DRJ
- Abstract
Michael addition reactions are highly useful in organic synthesis and are commonly accomplished using organocatalysts. However, the corresponding biocatalytic Michael additions are rare, typically lack synthetically useful substrate scope, and suffer from low stereoselectivity. Herein we report a biocatalytic nitro-Michael addition, catalyzed by NahE, that proceeds with low catalyst loading at room temperature in moderate to excellent enantioselectivity and high yields. A series of β-nitrostyrenes reacted with pyruvate in the presence of NahE to give, after oxidative decarboxylation, β-aryl-γ-nitrobutyric acids in up to 99 % yield without need for chromatography, providing a simple preparative-scale route to chiral GABA analogues. This reaction represents the first example of an aldolase displaying promiscuous Michaelase activity and opens the use of nitroalkenes in place of aldehydes as substrates for aldolases., (© 2022 Wiley-VCH GmbH.)
- Published
- 2023
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187. Community-based surveys for Plasmodium falciparum pfhrp2 and pfhrp3 gene deletions in selected regions of mainland Tanzania
- Author
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Bakari, Catherine, Jones, Sophie, Subramaniam, Gireesh, Mandara, Celine I., Chiduo, Mercy G., Rumisha, Susan, Chacky, Frank, Molteni, Fabrizio, Mandike, Renata, Mkude, Sigsbert, Njau, Ritha, Herman, Camelia, Nace, Douglas P., Mohamed, Ally, Udhayakumar, Venkatachalam, Kibet, Caleb K., Nyanjom, Steven G., Rogier, Eric, and Ishengoma, Deus S.
- Published
- 2020
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188. Polysaccharide-layered double hydroxide–aldolase biohybrid beads for biocatalysed CC bond formation.
- Author
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Mahdi, Rima, Guérard-Hélaine, Christine, Laroche, Céline, Michaud, Philippe, Prévot, Vanessa, Forano, Claude, and Lemaire, Marielle
- Subjects
- *
POLYSACCHARIDES , *BIOHYBRID artificial organs , *BIOCATALYSIS , *HYDROXIDES , *CARRAGEENANS - Abstract
This study describes the design a novel microbioreactor for the biocatalysed asymmetric synthesis of polyhydroxylated compounds. The bioreactor was elaborated by a hierarchical assembly of a recombinant fructose-6-phosphate aldolase (FSA wt ), layered double hydroxides (LDH) nanoplatelets and polysaccharide beads. Various polysaccharides were tested to encapsulate FSA wt and pre-immobilised FSA wt in LDH (FSA wt @Mg 2 Al-LDH). ι-Carrageenan appears as the most suitable candidate to prepare biohybrid beads. The retained activities in ι-carrageenan beads were measured for both free FSA wt and immobilised FSA wt revealing a 3 fold higher activity in favour of the pre-immobilised FSA. This result was probably due to a positive interaction between the negatively charged polysaccharide and the positively charged LDH layers. The catalytic activity, the recyclability and the storage of the beads were studied in addition to the leakage of FSA wt activity from beads. Nanostructuration of both FSA wt /ι-carr and FSA wt @Mg 2 Al-LDH/ι-carr was investigated by structural and textural characterization techniques. [ABSTRACT FROM AUTHOR]
- Published
- 2015
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189. Amino acid positions subject to multiple coevolutionary constraints can be robustly identified by their eigenvector network centrality scores.
- Author
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Parente, Daniel J., Ray, J. Christian J., and Swint‐Kruse, Liskin
- Abstract
As proteins evolve, amino acid positions key to protein structure or function are subject to mutational constraints. These positions can be detected by analyzing sequence families for amino acid conservation or for coevolution between pairs of positions. Coevolutionary scores are usually rank-ordered and thresholded to reveal the top pairwise scores, but they also can be treated as weighted networks. Here, we used network analyses to bypass a major complication of coevolution studies: For a given sequence alignment, alternative algorithms usually identify different, top pairwise scores. We reconciled results from five commonly-used, mathematically divergent algorithms (ELSC, McBASC, OMES, SCA, and ZNMI), using the LacI/GalR and 1,6-bisphosphate aldolase protein families as models. Calculations used unthresholded coevolution scores from which column-specific properties such as sequence entropy and random noise were subtracted; "central" positions were identified by calculating various network centrality scores. When compared among algorithms, network centrality methods, particularly eigenvector centrality, showed markedly better agreement than comparisons of the top pairwise scores. Positions with large centrality scores occurred at key structural locations and/or were functionally sensitive to mutations. Further, the top central positions often differed from those with top pairwise coevolution scores: instead of a few strong scores, central positions often had multiple, moderate scores. We conclude that eigenvector centrality calculations reveal a robust evolutionary pattern of constraints--detectable by divergent algorithms--that occur at key protein locations. Finally, we discuss the fact that multiple patterns coexist in evolutionary data that, together, give rise to emergent protein functions. [ABSTRACT FROM AUTHOR]
- Published
- 2015
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190. Enzymatic synthesis of rare sugars with l-rhamnulose-1-phosphate aldolase from Thermotoga maritima MSB8.
- Author
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Li, Zijie, Wu, Xiaoru, Cai, Li, Duan, Shenglin, Liu, Jia, Yuan, Peng, Nakanishi, Hideki, and Gao, Xiao-Dong
- Subjects
- *
ALDOLASES , *PHOSPHATES , *ESCHERICHIA coli , *FERMENTATION , *THERMOPHILIC bacteria - Abstract
l -Rhamnulose-1-phosphate aldolase from a thermophilic source ( Thermotoga maritima MSB8) (RhaD T.mari ) was heterologously overexpressed in Escherichia coli and the stereoselectivity of this enzyme with or without Nus tag was investigated. We also applied this enzyme to the synthesis of rare sugars d -psicose, d -sorbose, l -tagatose and l -fructose using our one-pot four-enzyme system. To the best of our knowledge, this is the first use of RhaD from a thermophilic source for rare sugar synthesis and the temperature tolerance of this enzyme paves the path for large scale fermentation. [ABSTRACT FROM AUTHOR]
- Published
- 2015
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191. Neuraminidase (sialidase) from Aeromonas sp. strain 40/02 - isolation and partial purification.
- Author
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Engibarov, Stephan, Еneva, Rumyana, and Abrashev, Ignat
- Abstract
Neuraminidase is a virulence factor in many viruses and pathogenic bacteria. There are few reports of the detection of neuraminidase in the Aeromonas genus, but they do not include biochemical studies on the enzyme. In this work the neuraminidase production of Aeromonas sp. 40/02 strain and some properties of the enzyme were investigated for the first time. Neuraminidase was found in the supernatant, as well as in the cytosolic and membrane fractions of disrupted cells. It was demonstrated that the enzyme production is induced by a number of compounds structurally related to sialic acid. New data on the presence of extracellular and intracellular N-acylneuraminate lyase were obtained, suggesting a nutritional role of sialometabolism in this strain. For the first time, Aeromonas neuraminidase was isolated and partially purified by ion-exchange chromatography. Different purification profiles were registered depending on the growth media. The preparations containing neuraminidase activity were analyzed by native PAGE, and one of them was associated with an active protein band with a molecular weight of about 130 kDa. Our results suggest the presence of neuraminidase isoforms in Aeromonas sp. 40/02. [ABSTRACT FROM AUTHOR]
- Published
- 2015
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192. The use of an elevated aldolase in diagnosing and managing eosinophilic fasciitis.
- Author
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Nashel, Jennifer and Steen, Virginia
- Subjects
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ALDOLASE genetics , *FASCIITIS , *EOSINOPHILIA , *HYPERGAMMAGLOBULINEMIA , *CREATINE kinase , *BLOOD sedimentation , *DIAGNOSIS , *THERAPEUTICS - Abstract
Eosinophilic fasciitis (EF) is a rare localized fibrosing disorder of the fascia whose diagnosis is often suspected based on clinical findings and laboratory values. These lab abnormalities can be transient in early disease and may not always be present. We have reviewed a case series of patients to assess the utility of the various laboratory abnormalities in diagnosing EF. We performed a retrospective review of EF patients seen at Georgetown University Hospital in the Division of Rheumatology during 2009 and 2013. This review included 15 adult patients with EF with a mean age at diagnosis of 45 years (range 18 to 77 years). The majority of patients 13/15 had classic skin thickening documented on all four extremities Only eight patients had peripheral eosinophilia ranging between 8 and 38 %. In these patients, the peripheral eosinophilia was an early but transient finding. Inflammatory markers including the erythrocyte sedimentation rate (ESR) was elevated in 5/14 and C-reactive Protein (CRP) was elevated in 7/11. At disease presentation, only one of eleven patients checked had an elevated creatine phosphokinase (CPK). Aldolase levels were available for 12 of the 15 patients, and they were increased in 11 out of 12 patients. We have found that in this case series, aldolase was more likely to be abnormal than peripheral eosinophilia, hypergammaglobulinemia, and ESR particularly after starting treatment. Aldolase should be measured in all patients suspected of having EF, and may also play a useful role in following disease activity. [ABSTRACT FROM AUTHOR]
- Published
- 2015
- Full Text
- View/download PDF
193. Aldolase as a Chirality Intersection of L-Amino Acids and D-Sugars.
- Author
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Munegumi, Toratane
- Abstract
Aldolase plays an important role in glycolysis and gluconeogenesis to produce D-fructose-1,6-bisphosphate (D-FBP) from dihydroxyacetone phosphate (DHP) and D-glyceraldehyde-3-phosphate (D-GAP). This reaction is stereoselective and retains the D-GAP 2R configuration and yields D-FBP (with the configuration: 3S, 4S, 5R). The 3- and 4-position carbons are the newly formed chiral carbons because the 5-position carbon of D-FBP comes from the 2-position of D-GAP. Although four diastereomeric products, ( 3S, 4R, 5R), ( 3R, 4R, 5R), ( 3R, 4S, 5R), ( 3S, 4S, 5R), are expected in the nonenzymatic reaction, only the ( 3S, 4S, 5R) diastereomer (D-FBP) is obtained. Therefore, the chirality in the 3- and 4-positions is induced by the chirality of the enzyme composed of L-amino acid residues. D-Glucose-6-phosphate (D-G6P), which is generated from D-FBP in the gluconeogenesis pathway, produces D-ribose-5-phosphate (D-R5P) in the pentose phosphate pathway. D-R5P is converted to PRPP (5-phosphoribosyl-α-pyrophosphate), which is used for the de novo synthesis of nucleotides. Ribonucleic acid (RNA) uses the nucleotides as building blocks. The configurations of the 4R-carbon and of the 3S-carbon are retained. The stereochemical structure of RNA is based on 3S as well as 4R (D). The consideration above suggests that aldolase is a key enzyme that determines the 3S configuration in D-R5P. It is thus a chirality intersection between amino acids and sugars, because the sugar chirality is determined by the chiral environment of an L-amino acid protein, aldolase, to produce D-FBP. [ABSTRACT FROM AUTHOR]
- Published
- 2015
- Full Text
- View/download PDF
194. Synthesis of nitro(benzo)thiazole acetamides and in vitro antiprotozoal effect against amitochondriate parasites Giardia intestinalis and Trichomonas vaginalis.
- Author
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Navarrete-Vázquez, Gabriel, Chávez-Silva, Fabiola, Colín-Lozano, Blanca, Estrada-Soto, Samuel, Hidalgo-Figueroa, Sergio, Guerrero-Álvarez, Jorge, Méndez, Sara T., Reyes-Vivas, Horacio, Oria-Hernández, Jesús, Canul-Canché, Jaqueline, Ortiz-Andrade, Rolffy, and Moo-Puc, Rosa
- Subjects
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CHEMICAL synthesis , *THIAZOLES , *ANTIPROTOZOAL agents , *GIARDIA lamblia , *TRICHOMONAS vaginalis - Abstract
We synthesized four 5-nitrothiazole ( 1 – 4 ) and four 6-nitrobenzothiazole acetamides ( 5 – 8 ) using an easy two step synthetic route. All compounds were tested in vitro against amitochondriate parasites Giardia intestinalis and Trichomonas vaginalis , showing excellent antiprotozoal effects. IC 50 ’s of the most potent compounds range from nanomolar to low micromolar order, being more active than their drugs of choice. Compound 1 (IC 50 = 122 nM), was 44-times more active than Metronidazole, and 10-fold more effective than Nitazoxanide against G. intestinalis and showed good trichomonicidal activity (IC 50 = 2.24 μM). This compound did not display in vitro cytotoxicity against VERO cells. The in vitro inhibitory effect of compounds 1 – 8 and Nitazoxanide against G. intestinalis fructose-1,6-biphosphate aldolase ( Gi FBPA) was evaluated as potential drug target, showing a clear inhibitory effect over the enzyme activity. Molecular docking of compounds 1 , 4 and Nitazoxanide into the ligand binding pocket of Gi FBPA, revealed contacts with the active site residues of the enzyme. Ligand efficiency metrics of 1 revealed optimal combinations of physicochemical and antiprotozoal properties, better than Nitazoxanide. [ABSTRACT FROM AUTHOR]
- Published
- 2015
- Full Text
- View/download PDF
195. l-Rhamnulose-1-phosphate and l-fuculose-1-phosphate aldolase mediated multi-enzyme cascade systems for nitrocyclitol synthesis.
- Author
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Camps Bres, Flora, Guérard-Hélaine, Christine, Hélaine, Virgil, Fernandes, Carlos, Sánchez-Moreno, Israel, Traïkia, Mounir, García-Junceda, Eduardo, and Lemaire, Marielle
- Subjects
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CYCLITOLS , *PHOSPHATASES , *INTRAMOLECULAR catalysis , *CHEMICAL bonds , *STEREOSELECTIVE reactions - Abstract
One-pot multistep stereoselective cascade reactions were implemented for the straightforward synthesis of various nitrocyclitols. Two kinases, an aldolase and a phosphatase were involved in this process, together with a spontaneous intramolecular Henry reaction to provide the nitrocyclitol moiety. The C C bond formation catalysed by the aldolase and the nitroaldol reactions were key steps to build the carbocycle stereoselectively. The aldolase acceptor substrates were all 4-nitrobutanal structurally based, either hydroxylated or unsubstituted at the C2 and/or C3 positions. l -Fuculose-1-phosphate aldolase (FucA) catalysed the formation of the expected ( R , R )- or d -erythro aldol, except in the case of 4-nitrobutanal, from which the epimeric ( R , S )- or l -threo aldol was also formed. l -Rhamnulose-1-phosphate aldolase consistently formed the expected ( R , S )- or l -threo aldol together with a minor amount of ( R , R )- or d -erythro aldol. The intramolecular Henry reaction was also found to be stereoselective, occurring spontaneously once the aldol was formed due to the presence of both ketone and a terminally positioned nitro group. The combination of this set of reactions successfully furnished 11 nitrocyclitols which have not been described previously in the literature. [ABSTRACT FROM AUTHOR]
- Published
- 2015
- Full Text
- View/download PDF
196. Design of an allosterically regulated retroaldolase.
- Author
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Raymond, Elizabeth A., Mack, Korrie L., Yoon, Jennifer H., Moroz, Olesia V., Moroz, Yurii S., and Korendovych, Ivan V.
- Abstract
We employed a minimalist approach for design of an allosterically controlled retroaldolase. Introduction of a single lysine residue into the nonenzymatic protein calmodulin led to a 15,000-fold increase in the second order rate constant for retroaldol reaction with methodol as a substrate. The resulting catalyst AlleyCatR is active enough for subsequent directed evolution in crude cell bacterial lysates. AlleyCatR's activity is allosterically regulated by Ca
2+ ions. No catalysis is observed in the absence of the metal ion. The increase in catalytic activity originates from the hydrophobic interaction of the substrate (∼2000-fold) and the change in the apparent p Ka of the active lysine residue. [ABSTRACT FROM AUTHOR]- Published
- 2015
- Full Text
- View/download PDF
197. Characterization of glycerol phosphate oxidase from Streptococcus pneumoniae and its application for ketose synthesis.
- Author
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Li, Zijie, Qiao, Yingxin, Cai, Li, Nakanishi, Hideki, and Gao, Xiao-Dong
- Subjects
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GLYCERIN , *OXIDASES , *STREPTOCOCCUS pneumoniae , *KETOSES , *CHEMICAL synthesis , *ALDOLASES - Abstract
Glycerol phosphate oxidase from Streptococcus pneumoniae (GPO S.pne ) was purified and characterized. By the actions of GPO S.pne and dihydroxyacetone phosphate (DHAP)-dependent aldolases, various ketoses including rare sugars were synthesized with glyceraldehydes as acceptors in a one-pot four-enzyme system. [ABSTRACT FROM AUTHOR]
- Published
- 2015
- Full Text
- View/download PDF
198. The metalloprotein YhcH is an anomerase providing N-acetylneuraminate aldolase with the open form of its substrate
- Author
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Raphaël Frédérick, Gladys Deumer, Alessio Peracchi, Takfarinas Kentache, Maria Veiga-da-Cunha, Vincent Haufroid, Guido T. Bommer, Carole L. Linster, Emile Van Schaftingen, Léopold Thabault, UCL - SSS/DDUV/BCHM - Biochimie-Recherche métabolique, and UCL - SSS/LDRI - Louvain Drug Research Institute
- Subjects
Models, Molecular ,0301 basic medicine ,2-KDXyl, 2-keto-3-deoxyxylonate ,NPL, human Neu5Ac aldolase ,Glycan ,Protein Conformation ,2,3-EN, 2,3-dehydro-2-deoxy-N-acetylneuraminate ,NanA, E. coli Neu5Ac aldolase ,Biochemistry, biophysics & molecular biology [F05] [Life sciences] ,medicine.disease_cause ,Biochemistry ,aldolase ,03 medical and health sciences ,N acetylneuraminate ,Fructose-Bisphosphate Aldolase ,Escherichia coli ,medicine ,Metalloprotein ,Biochimie, biophysique & biologie moléculaire [F05] [Sciences du vivant] ,Molecular Biology ,chemistry.chemical_classification ,030102 biochemistry & molecular biology ,biology ,Chemistry ,Neu5Ac, N-acetylneuraminate ,Aldolase A ,metalloprotein ,TMSP, 2,2,3,3-2H4 (trimethylsilyl)propionic acid sodium salt ,Substrate (chemistry) ,Stereoisomerism ,anomerase ,Cell Biology ,biology.organism_classification ,N-Acetylneuraminic Acid ,Protein Transport ,030104 developmental biology ,sialic acid ,Periplasm ,biology.protein ,Energy source ,mutarotase ,KDN, 2-keto-3-deoxynonanoate ,Bacteria ,Research Article ,2,7-AN, 2,7-anhydro-Neu5Ac - Abstract
N-acetylneuraminate (Neu5Ac), an abundant sugar present in glycans in vertebrates and some bacteria, can be used as an energy source by several prokaryotes, including Escherichia coli. In solution, more than 99% of Neu5Ac is in cyclic form (≈ 92% beta-anomer and ≈ 7% alpha-anomer), whereas < 0.5% is in the open form. The aldolase that initiates Neu5Ac metabolism in E. coli, NanA, has been reported to act on the alpha-anomer. Surprisingly, when we performed this reaction at pH 6 to minimize spontaneous anomerization, we found NanA and its human homolog NPL preferentially metabolize the open form of this substrate. We tested whether the E. coli Neu5Ac anomerase NanM could promote turnover, finding it stimulated the utilization of both beta and alpha-anomers by NanA in vitro. However, NanM is localized in the periplasmic space and cannot facilitate Neu5Ac metabolism by NanA in the cytoplasm in vivo. We discovered that YhcH, a cytoplasmic protein encoded by many Neu5Ac catabolic operons and belonging to a protein family of unknown function (DUF386), also facilitated Neu5Ac utilization by NanA and NPL, and displayed Neu5Ac anomerase activity in vitro. YhcH contains Zn, and its accelerating effect on the aldolase reaction was inhibited by metal chelators. Remarkably, several transition metals accelerated Neu5Ac anomerization in the absence of enzyme. Experiments with E. coli mutants indicated that YhcH expression provides a selective advantage for growth on Neu5Ac. In conclusion, YhcH plays the unprecedented role of providing an aldolase with the preferred unstable open form of its substrate.
- Published
- 2021
199. Discovery and Engineering of the L-Threonine Aldolase from Neptunomonas Marine for Efficient Synthesis of b-Hydroxy-a-Amino Acids via C-C Formation.
- Published
- 2023
200. Patent Application Titled "Methods Of Treating Chronic Kidney Disease (CKD) With Inhibitors Of Protective Loss-Of-Function Genes" Published Online (USPTO 20230107173).
- Subjects
PATENT applications ,RIBOSOMAL proteins ,CHRONIC kidney failure ,PATENT offices ,ANTISENSE nucleic acids - Abstract
The method according to claim 9, wherein the inhibitory nucleic acid molecule comprises an antisense nucleic acid molecule, a small interfering RNA (siRNA), or a short hairpin RNA (shRNA) that hybridizes to an ALDH1L1 mRNA, an ALDOB mRNA, a G6PC mRNA, an LRP2 mRNA, an RPL3L mRNA, an SLC25A45 mRNA, or an SLC7A9 mRNA. The method according to claim 1, wherein i) the ALDH1L1 inhibitor comprises an inhibitory nucleic acid molecule that hybridizes to an ALDH1L1 nucleic acid molecule: ii) the ALDOB inhibitor comprises an inhibitory nucleic acid molecule that hybridizes to an ALDOB nucleic acid molecule: iii) the G6PC inhibitor comprises an inhibitory nucleic acid molecule that hybridizes to a G6PC nucleic acid molecule: iv) the LRP2 inhibitor comprises an inhibitory nucleic acid molecule that hybridizes to an LRP2 nucleic acid molecule: v) the RPL3L inhibitor comprises an inhibitory nucleic acid molecule that hybridizes to an RPL3L nucleic acid molecule: vi) the SLC25A45 inhibitor comprises an inhibitory nucleic acid molecule that hybridizes to an SLC25A45 nucleic acid molecule; and/or vii) the SLC7A9 inhibitor comprises an inhibitory nucleic acid molecule that hybridizes to an SLC7A9 nucleic acid molecule. [Extracted from the article]
- Published
- 2023
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