5,377 results on '"A J, Webb"'
Search Results
152. A generalized approach to x-ray data modeling for high-energy-density plasma experiments
- Author
-
T. Nagayama, M. A. Schaeuble, J. R. Fein, G. P. Loisel, M. Wu, D. C. Mayes, S. B. Hansen, P. F. Knapp, T. J. Webb, J. Schwarz, and R. A. Vesey
- Subjects
Instrumentation - Abstract
Accurate understanding of x-ray diagnostics is crucial for both interpreting high-energy-density experiments and testing simulations through quantitative comparisons. X-ray diagnostic models are complex. Past treatments of individual x-ray diagnostics on a case-by-case basis have hindered universal diagnostic understanding. Here, we derive a general formula for modeling the absolute response of non-focusing x-ray diagnostics, such as x-ray imagers, one-dimensional space-resolved spectrometers, and x-ray power diagnostics. The present model is useful for both data modeling and data processing. It naturally accounts for the x-ray crystal broadening. The new model verifies that standard approaches for a crystal response can be good approximations, but they can underestimate the total reflectivity and overestimate spectral resolving power by more than a factor of 2 in some cases near reflectivity edge features. We also find that a frequently used, simplified-crystal-response approximation for processing spectral data can introduce an absolute error of more than an order of magnitude and the relative spectral radiance error of a factor of 3. The present model is derived with straightforward geometric arguments. It is more general and is recommended for developing a unified picture and providing consistent treatment over multiple x-ray diagnostics. Such consistency is crucial for reliable multi-objective data analyses.
- Published
- 2023
- Full Text
- View/download PDF
153. Effect of tele‐COVID rounds and a tele‐stewardship intervention on antibiotic use in COVID‐19 patients admitted to 17 small community hospitals
- Author
-
Stephanie Shealy May, John J. Veillette, Brandon J. Webb, Edward A. Stenehjem, Steven K. Throneberry, Stephanie Gelman, Michael Pirozzi, Valoree Stanfield, C. Dustin Waters, Nancy A. Grisel, and Todd J. Vento
- Subjects
Leadership and Management ,Health Policy ,Fundamentals and skills ,General Medicine ,Assessment and Diagnosis ,Care Planning - Published
- 2023
- Full Text
- View/download PDF
154. Analyzing Predictors of Control Measures and Psychosocial Problems Associated with COVID-19 Pandemic: Evidence from Eight Countries
- Author
-
Sheikh Saifur Rahman Jony, Ubydul Haque, Nathaniel J. Webb, Emily Spence, Md. Siddikur Rahman, Nasrin Aghamohammadi, Yongchan Lie, Aracely Angulo-Molina, Sushmitha Ananth, Xuelian Ren, Nobuyuki Kawachi, Hiromu Ito, Osman Ulvi, Jailos Lubinda, Ajlina Karamehic-Muratovic, Wasim Maher, Parveen Ali, and M. Sohel Rahman
- Subjects
COVID-19 pandemic ,knowledge ,attitude ,practice ,protection measures ,psychosocial impacts of ,Psychology ,BF1-990 - Abstract
COVID-19 has harshly impacted communities globally. This study provides relevant information for creating equitable policy interventions to combat the spread of COVID-19. This study aims to predict the knowledge, attitude, and practice (KAP) of the COVID-19 pandemic at a global level to determine control measures and psychosocial problems. A cross-sectional survey was conducted from July to October 2020 using an online questionnaire. Questionnaires were initially distributed to academicians worldwide. These participants distributed the survey among their social, professional, and personal groups. Responses were collected and analyzed from 67 countries, with a sample size of 3031. Finally, based on the number of respondents, eight countries, including Bangladesh, China, Japan, Malaysia, Mexico, Pakistan, the United States, and Zambia were rigorously analyzed. Specifically, questionnaire responses related to COVID-19 accessibility, behavior, knowledge, opinion, psychological health, and susceptibility were collected and analyzed. As per our analysis, age groups were found to be a primary determinant of behavior, knowledge, opinion, psychological health, and susceptibility scores. Gender was the second most influential determinant for all metrics except information about COVID-19 accessibility, for which education was the second most important determinant. Respondent profession was the third most important metric for all scores. Our findings suggest that health authorities must promote health educations, implement related policies to disseminate COVID-19-awareness that can prevent and control the spread of COVID-19 infection.
- Published
- 2021
- Full Text
- View/download PDF
155. Monitoring Greenhouse Gases from Space
- Author
-
Hartmut Boesch, Yi Liu, Johanna Tamminen, Dongxu Yang, Paul I. Palmer, Hannakaisa Lindqvist, Zhaonan Cai, Ke Che, Antonio Di Noia, Liang Feng, Janne Hakkarainen, Iolanda Ialongo, Nikoleta Kalaitzi, Tomi Karppinen, Rigel Kivi, Ella Kivimäki, Robert J. Parker, Simon Preval, Jing Wang, Alex J. Webb, Lu Yao, and Huilin Chen
- Subjects
greenhouse gases ,satellite remote sensing ,validation ,atmospheric transport modelling ,Science - Abstract
The increase in atmospheric greenhouse gas concentrations of CO2 and CH4, due to human activities, is the main driver of the observed increase in surface temperature by more than 1 °C since the pre-industrial era. At the 2015 United Nations Climate Change Conference held in Paris, most nations agreed to reduce greenhouse gas emissions to limit the increase in global surface temperature to 1.5 °C. Satellite remote sensing of CO2 and CH4 is now well established thanks to missions such as NASA’s OCO-2 and the Japanese GOSAT missions, which have allowed us to build a long-term record of atmospheric GHG concentrations from space. They also give us a first glimpse into CO2 and CH4 enhancements related to anthropogenic emission, which helps to pave the way towards the future missions aimed at a Monitoring & Verification Support (MVS) capacity for the global stock take of the Paris agreement. China plays an important role for the global carbon budget as the largest source of anthropogenic carbon emissions but also as a region of increased carbon sequestration as a result of several reforestation projects. Over the last 10 years, a series of projects on mitigation of carbon emission has been started in China, including the development of the first Chinese greenhouse gas monitoring satellite mission, TanSat, which was successfully launched on 22 December 2016. Here, we summarise the results of a collaborative project between European and Chinese teams under the framework of the Dragon-4 programme of ESA and the Ministry of Science and Technology (MOST) to characterize and evaluate the datasets from the TanSat mission by retrieval intercomparisons and ground-based validation and to apply model comparisons and surface flux inversion methods to TanSat and other CO2 missions, with a focus on China.
- Published
- 2021
- Full Text
- View/download PDF
156. Deletion Mutants of Francisella Phagosomal Transporters FptA and FptF Are Highly Attenuated for Virulence and Are Protective Against Lethal Intranasal Francisella LVS Challenge in a Murine Model of Respiratory Tularemia
- Author
-
Brandi E. Hobbs, Courtney A. Matson, Vasileios I. Theofilou, Tonya J. Webb, Rania H. Younis, and Eileen M. Barry
- Subjects
Francisella tularensis ,Live Vaccine Strain (LVS) ,live attenuated vaccine ,MFS transporter ,attenuation ,organ burdens ,Medicine - Abstract
Francisella tularensis (Ft) is a Gram-negative, facultative intracellular bacterium that is a Tier 1 Select Agent of concern for biodefense for which there is no licensed vaccine. A subfamily of 9 Francisella phagosomal transporter (fpt) genes belonging to the Major Facilitator Superfamily of transporters was identified as critical to pathogenesis and potential targets for attenuation and vaccine development. We evaluated the attenuation and protective capacity of LVS derivatives with deletions of the fptA and fptF genes in the C57BL/6J mouse model of respiratory tularemia. LVSΔfptA and LVSΔfptF were highly attenuated with LD50 values of >20 times that of LVS when administered intranasally and conferred 100% protection against lethal challenge. Immune responses to the fpt mutant strains in mouse lungs on day 6 post-infection were substantially modified compared to LVS and were associated with reduced organ burdens and reduced pathology. The immune responses to LVSΔfptA and LVSΔfptF were characterized by decreased levels of IL-10 and IL-1β in the BALF versus LVS, and increased numbers of B cells, αβ and γδ T cells, NK cells, and DCs versus LVS. These results support a fundamental requirement for FptA and FptF in the pathogenesis of Ft and the modulation of the host immune response.
- Published
- 2021
- Full Text
- View/download PDF
157. Performances of PMMA-Based Optical Fiber Bragg Grating Sensor in Extended Temperature Range
- Author
-
Wei Zhang and David J. Webb
- Subjects
fiber Bragg gratings ,polymer optical fiber ,thermo-optic effect ,refractive index humidity dependence ,Applied optics. Photonics ,TA1501-1820 - Abstract
PMMA based optical fiber Bragg grating (POFBG) sensors are investigated in an environmental chamber with controlled temperature and relative humidity at temperature extended to 70 °C. At below a critical temperature of 50 °C the POFBG sensor exhibits good linearity and sensitivity for both temperature and humidity sensing. Nonlinear responses are observed at higher temperature, giving rise to varying, reduced magnitudes of sensitivities. An important feature of POFBG humidity sensing is observed at above critical temperature where the POFBG humidity sensitivity turns from positive to negative. A theoretical model based on Lorentz–Lorenz equation is presented to estimate the dependence of POFBG refractive index on temperature and relative humidity. The experimental results qualitatively agree with the theoretical analyses.
- Published
- 2021
- Full Text
- View/download PDF
158. Targeting Natural Killer T Cells in Solid Malignancies
- Author
-
Zewde Ingram, Shriya Madan, Jenoy Merchant, Zakiya Carter, Zen Gordon, Gregory Carey, and Tonya J. Webb
- Subjects
NKT cells ,CD1d ,cancer immunotherapy ,Cytology ,QH573-671 - Abstract
Natural killer T (NKT) cells are a unique subset of lymphocytes that recognize lipid antigens in the context of the non-classical class I MHC molecule, CD1d, and serve as a link between the innate and adaptive immune system through their expeditious release of cytokines. Whereas NKT have well-established roles in mitigating a number of human diseases, herein, we focus on their role in cancer. NKT cells have been shown to directly and indirectly mediate anti-tumor immunity and manipulating their effector functions can have therapeutic significances in treatment of cancer. In this review, we highlight several therapeutic strategies that have been used to harness the effector functions of NKT cells to target different types of solid tumors. We also discuss several barriers to the successful utilization of NKT cells and summarize effective strategies being developed to harness the unique strengths of this potent population of T cells. Collectively, studies investigating the therapeutic potential of NKT cells serve not only to advance our understanding of this powerful immune cell subset, but also pave the way for future treatments focused on the modulation of NKT cell responses to enhance cancer immunotherapy.
- Published
- 2021
- Full Text
- View/download PDF
159. Rib-cage-movement measurements as a potential new trigger signal in non-invasive mechanical ventilation.
- Author
-
Marija D. Ivanovic, Jovana Petrovic, Marjan Miletic, Aleksandar Danicic, Bosko Bojovic, Miodrag Vukcevic, Biljana Lazovic, Zoran Gluvic, Ljupco Hadzievski, Thomas Allsop, and David J. Webb
- Published
- 2015
- Full Text
- View/download PDF
160. Safety of Prophylactic Anticoagulation During Bedside Procedures: A Prospective Multicenter Observational Study
- Author
-
Cassie A. Barton, David S. Shapiro, Andrew J. Webb, Brendan Gontarz, and Martin Schreiber
- Subjects
Surgery - Published
- 2022
- Full Text
- View/download PDF
161. The effect of antiretroviral therapy with high central nervous system penetration on HIV-related cognitive impairment: a systematic review and meta-analysis
- Author
-
Andrew J. Webb, Eric P. Borrelli, Ami Vyas, Lynn E. Taylor, and Ashley L. Buchanan
- Subjects
Health (social science) ,Social Psychology ,Public Health, Environmental and Occupational Health - Abstract
Chronic complications are a significant concern for people living with HIV/AIDS (PLWHA) infection. HIV-associated neurocognitive disorders (HAND) are prevalent in PLWHA. Yet, the efficacy of medications that penetrate the central nervous system (CNS) at preventing or slowing the progression of HAND remains largely unknown. The objective of this study was to determine whether high CNS penetration effectiveness (CPE) regimens improve neurocognitive test scores in PLWHA on combined antiretroviral therapy (cART). Primary literature evaluating cognitive outcomes based on CPE score of cART regimens in PLWHA was assembled from PubMed/Medline and EMBASE. Both randomized controlled trials and observational studies with at least 12 weeks of follow-up were included. A meta-analysis was conducted to calculate the standardized mean difference. Eight trials including a total of 3,303 patients with 13,103 person-years of follow-up were included in the systematic review. Four trials (
- Published
- 2022
- Full Text
- View/download PDF
162. Propagation of barotropic Kelvin waves around Antarctica
- Author
-
David J. Webb, Ryan M. Holmes, Paul Spence, and Matthew H. England
- Subjects
Oceanography - Abstract
Barotropic (i.e., depth-uniform) coastal oceanic Kelvin waves can provide rapid teleconnections from climate and weather events in one location to remote regions of the globe. Studies suggest that barotropic Kelvin waves observed around Antarctica may provide a mechanism for rapidly propagating circulation anomalies around the continent, with implications for continental shelf temperatures along the West Antarctic Peninsula and thus Antarctic ice mass loss rates. However, how the propagation of Kelvin waves around Antarctica is influenced by features such as coastal geometry and variations in bathymetry remains poorly understood. Here we study the propagation of barotropic Antarctic Kelvin waves using a range of idealized model simulations. Using a single-layer linear shallow water model with 1∘ horizontal resolution, we gradually add complexity of continental configuration, realistic bathymetry, variable planetary rotation, and forcing scenarios, to isolate sources and sinks of wave energy and the mechanisms responsible. We find that approximately 75% of sub-inertial barotropic Kelvin wave energy is scattered away from Antarctica as other waves in one circumnavigation of the continent, due mostly to interactions with bathymetry. Super-inertial barotropic Kelvin waves lose nearly 95% of their energy in one circumpolar loop, due to interactions with both coastal geometry and bathymetry. These results help to explain why only sustained signals of low-frequency resonant barotropic Kelvin waves have been observed around Antarctica, and contribute to our understanding of the role of rapid, oceanic teleconnections in climate.
- Published
- 2022
- Full Text
- View/download PDF
163. The Cloud Feedback Model Intercomparison Project (CFMIP) contribution to CMIP6
- Author
-
M. J. Webb, T. Andrews, A. Bodas-Salcedo, S. Bony, C. S. Bretherton, R. Chadwick, H. Chepfer, H. Douville, P. Good, J. E. Kay, S. A. Klein, R. Marchand, B. Medeiros, A. P. Siebesma, C. B. Skinner, B. Stevens, G. Tselioudis, Y. Tsushima, and M. Watanabe
- Subjects
Geology ,QE1-996.5 - Abstract
The primary objective of CFMIP is to inform future assessments of cloud feedbacks through improved understanding of cloud–climate feedback mechanisms and better evaluation of cloud processes and cloud feedbacks in climate models. However, the CFMIP approach is also increasingly being used to understand other aspects of climate change, and so a second objective has now been introduced, to improve understanding of circulation, regional-scale precipitation, and non-linear changes. CFMIP is supporting ongoing model inter-comparison activities by coordinating a hierarchy of targeted experiments for CMIP6, along with a set of cloud-related output diagnostics. CFMIP contributes primarily to addressing the CMIP6 questions How does the Earth system respond to forcing? and What are the origins and consequences of systematic model biases? and supports the activities of the WCRP Grand Challenge on Clouds, Circulation and Climate Sensitivity.A compact set of Tier 1 experiments is proposed for CMIP6 to address this question: (1) what are the physical mechanisms underlying the range of cloud feedbacks and cloud adjustments predicted by climate models, and which models have the most credible cloud feedbacks? Additional Tier 2 experiments are proposed to address the following questions. (2) Are cloud feedbacks consistent for climate cooling and warming, and if not, why? (3) How do cloud-radiative effects impact the structure, the strength and the variability of the general atmospheric circulation in present and future climates? (4) How do responses in the climate system due to changes in solar forcing differ from changes due to CO2, and is the response sensitive to the sign of the forcing? (5) To what extent is regional climate change per CO2 doubling state-dependent (non-linear), and why? (6) Are climate feedbacks during the 20th century different to those acting on long-term climate change and climate sensitivity? (7) How do regional climate responses (e.g. in precipitation) and their uncertainties in coupled models arise from the combination of different aspects of CO2 forcing and sea surface warming?CFMIP also proposes a number of additional model outputs in the CMIP DECK, CMIP6 Historical and CMIP6 CFMIP experiments, including COSP simulator outputs and process diagnostics to address the following questions. How well do clouds and other relevant variables simulated by models agree with observations?What physical processes and mechanisms are important for a credible simulation of clouds, cloud feedbacks and cloud adjustments in climate models?Which models have the most credible representations of processes relevant to the simulation of clouds?How do clouds and their changes interact with other elements of the climate system?
- Published
- 2017
- Full Text
- View/download PDF
164. Climatic suitability influences species specific abundance patterns of Australian flying foxes and risk of Hendra virus spillover
- Author
-
Gerardo A. Martin, Carlos Yanez-Arenas, Billie J. Roberts, Carla Chen, Raina K. Plowright, Rebecca J. Webb, and Lee F. Skerratt
- Subjects
Hendra virus ,Spillover ,Niche centroid ,Density ,Flying foxes ,Medicine (General) ,R5-920 - Abstract
Hendra virus is a paramyxovirus of Australian flying fox bats. It was first detected in August 1994, after the death of 20 horses and one human. Since then it has occurred regularly within a portion of the geographical distribution of all Australian flying fox (fruit bat) species. There is, however, little understanding about which species are most likely responsible for spillover, or why spillover does not occur in other areas occupied by reservoir and spillover hosts. Using ecological niche models of the four flying fox species we were able to identify which species are most likely linked to spillover events using the concept of distance to the niche centroid of each species. With this novel approach we found that 20 out of 27 events occur disproportionately closer to the niche centroid of two species (P. alecto and P. conspicillatus). With linear regressions we found a negative relationship between distance to the niche centroid and abundance of these two species. Thus, we suggest that the bioclimatic niche of these two species is likely driving the spatial pattern of spillover of Hendra virus into horses and ultimately humans.
- Published
- 2016
- Full Text
- View/download PDF
165. Atmospheric CH4 and CO2 enhancements and biomass burning emission ratios derived from satellite observations of the 2015 Indonesian fire plumes
- Author
-
R. J. Parker, H. Boesch, M. J. Wooster, D. P. Moore, A. J. Webb, D. Gaveau, and D. Murdiyarso
- Subjects
Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
The 2015–2016 strong El Niño event has had a dramatic impact on the amount of Indonesian biomass burning, with the El Niño-driven drought further desiccating the already-drier-than-normal landscapes that are the result of decades of peatland draining, widespread deforestation, anthropogenically driven forest degradation and previous large fire events. It is expected that the 2015–2016 Indonesian fires will have emitted globally significant quantities of greenhouse gases (GHGs) to the atmosphere, as did previous El Niño-driven fires in the region. The form which the carbon released from the combustion of the vegetation and peat soils takes has a strong bearing on its atmospheric chemistry and climatological impacts. Typically, burning in tropical forests and especially in peatlands is expected to involve a much higher proportion of smouldering combustion than the more flaming-characterised fires that occur in fine-fuel-dominated environments such as grasslands, consequently producing significantly more CH4 (and CO) per unit of fuel burned. However, currently there have been no aircraft campaigns sampling Indonesian fire plumes, and very few ground-based field campaigns (none during El Niño), so our understanding of the large-scale chemical composition of these extremely significant fire plumes is surprisingly poor compared to, for example, those of southern Africa or the Amazon.Here, for the first time, we use satellite observations of CH4 and CO2 from the Greenhouse gases Observing SATellite (GOSAT) made in large-scale plumes from the 2015 El Niño-driven Indonesian fires to probe aspects of their chemical composition. We demonstrate significant modifications in the concentration of these species in the regional atmosphere around Indonesia, due to the fire emissions.Using CO and fire radiative power (FRP) data from the Copernicus Atmosphere Service, we identify fire-affected GOSAT soundings and show that peaks in fire activity are followed by subsequent large increases in regional greenhouse gas concentrations. CH4 is particularly enhanced, due to the dominance of smouldering combustion in peatland fires, with CH4 total column values typically exceeding 35 ppb above those of background “clean air” soundings. By examining the CH4 and CO2 excess concentrations in the fire-affected GOSAT observations, we determine the CH4 to CO2 (CH4 ∕ CO2) fire emission ratio for the entire 2-month period of the most extreme burning (September–October 2015), and also for individual shorter periods where the fire activity temporarily peaks. We demonstrate that the overall CH4 to CO2 emission ratio (ER) for fires occurring in Indonesia over this time is 6.2 ppb ppm−1. This is higher than that found over both the Amazon (5.1 ppb ppm−1) and southern Africa (4.4 ppb ppm−1), consistent with the Indonesian fires being characterised by an increased amount of smouldering combustion due to the large amount of organic soil (peat) burning involved. We find the range of our satellite-derived Indonesian ERs (6.18–13.6 ppb ppm−1) to be relatively closely matched to that of a series of close-to-source, ground-based sampling measurements made on Kalimantan at the height of the fire event (7.53–19.67 ppb ppm−1), although typically the satellite-derived quantities are slightly lower on average. This seems likely because our field sampling mostly intersected smaller-scale peat-burning plumes, whereas the large-scale plumes intersected by the GOSAT Thermal And Near infrared Sensor for carbon Observation – Fourier Transform Spectrometer (TANSO-FTS) footprints would very likely come from burning that was occurring in a mixture of fuels that included peat, tropical forest and already-cleared areas of forest characterised by more fire-prone vegetation types than the natural rainforest biome (e.g. post-fire areas of ferns and scrubland, along with agricultural vegetation).The ability to determine large-scale ERs from satellite data allows the combustion behaviour of very large regions of burning to be characterised and understood in a way not possible with ground-based studies, and which can be logistically difficult and very costly to consider using aircraft observations. We therefore believe the method demonstrated here provides a further important tool for characterising biomass burning emissions, and that the GHG ERs derived for the first time for these large-scale Indonesian fire plumes during an El Niño event point to more routinely assessing spatiotemporal variations in biomass burning ERs using future satellite missions. These will have more complete spatial sampling than GOSAT and will enable the contributions of these fires to the regional atmospheric chemistry and climate to be better understood.
- Published
- 2016
- Full Text
- View/download PDF
166. Effect of Dietary Weight Loss and Macronutrient Intake on Body Composition and Physical Function in Adults with Knee Osteoarthritis: A Systematic Review
- Author
-
Emily J. Webb, Peter G. Osmotherly, and Surinder K. Baines
- Subjects
Eating ,Nutrition and Dietetics ,Weight Loss ,Body Composition ,Humans ,Osteoarthritis, Knee ,Overweight ,Geriatrics and Gerontology ,Diet - Abstract
Overweight and obesity increase the risk of development and progression of knee osteoarthritis (OA), with higher levels of fat mass and lower levels of lean mass associated with poorer functional status. The aim was to assess changes in weight, body composition and physical function following weight loss or weight maintenance interventions in knee OA. A comprehensive search of four databases was conducted. The risk of bias was assessed using the Quality Criteria Checklist for primary research. Primary outcomes included weight, body composition and physical function; secondary outcomes were lipids, inflammatory biomarkers and muscle strength. Eleven studies were included utilizing
- Published
- 2022
- Full Text
- View/download PDF
167. Synergistic activation of the insulin receptor via two distinct sites
- Author
-
Jie Li, Junhee Park, John P. Mayer, Kristofor J. Webb, Emiko Uchikawa, Jiayi Wu, Shun Liu, Xuewu Zhang, Michael H. B. Stowell, Eunhee Choi, and Xiao-chen Bai
- Subjects
Structural Biology ,Insulins ,Animals ,Insulin ,Molecular Biology ,Article ,Receptor, Insulin ,Signal Transduction - Abstract
Insulin receptor (IR) signaling controls multiple facets of animal physiology. Maximally four insulins bind to IR at two distinct sites, termed site-1 and site-2. However, the precise functional roles of each binding event during IR activation remain unresolved. Here, we showed that IR incompletely saturated with insulin predominantly forms an asymmetric conformation and exhibits partial activation. The one insulin bound IR adopts a Γ-shaped conformation. The two insulins bound IR assumes a Ƭ-shaped conformation. One insulin is bound at site-1 and another insulin simultaneously contacts both sites-1 and −2 in the Ƭ-shaped IR dimer. We further demonstrated that the concurrent binding of four insulins to sites-1 and −2 prevents the formation of asymmetric IR and promotes the T-shaped symmetric, fully active state. Collectively, our results demonstrate how the synergistic binding of multiple insulins promotes optimal IR activation.
- Published
- 2022
- Full Text
- View/download PDF
168. Formation and Characterization of a Stable Monolayer of Active Acetylcholinesterase on Planar Gold
- Author
-
Joshua M. Correira and Lauren J. Webb
- Subjects
Kinetics ,Acetylcholinesterase ,Electrochemistry ,General Materials Science ,Biosensing Techniques ,Gold ,Surfaces and Interfaces ,Enzymes, Immobilized ,Condensed Matter Physics ,Spectroscopy - Abstract
Enzyme activity is the basis for many biosensors where a catalytic event is used to detect the presence and amount of a biomolecule of interest. To create a practical point-of-care biosensor, these enzymes need to be removed from their native cellular environments and immobilized on an abiological surface to rapidly transduce a biochemical signal into an interpretable readout. This immobilization often leads to loss of activity due to unfolded, aggregated, or improperly oriented enzymes when compared to the native state. In this work, we characterize the formation and surface packing density of a stable monolayer of acetylcholinesterase (AChE) immobilized on a planar gold surface and quantify the extent of activity loss following immobilization. Using spectroscopic ellipsometry, we determined that the surface concentration of AChE on a saturated Au surface in a buffered solution was 2.77 ± 0.21 pmol cm
- Published
- 2022
- Full Text
- View/download PDF
169. Acetylcysteine has No Mechanistic Effect in Patients at Risk of Contrast‐Induced Nephropathy: A Failure of Academic Clinical Science
- Author
-
Euan A. Sandilands, Jessica M. B. Rees, Khuram Raja, Neeraj Dhaun, Emma E. Morrison, Kirsty Hickson, Jonathan Wraight, Tanya Gray, Lesley Briody, Sharon Cameron, Adrian P. Thompson, Neil R. Johnston, Neal Uren, Jane Goddard, Andy Treweeke, Gordon Rushworth, David J. Webb, D. Nicholas Bateman, John Norrie, Ian L. Megson, and Michael Eddleston
- Subjects
Pharmacology ,Cross-Over Studies ,Treatment Outcome ,Creatinine ,Contrast Media ,Humans ,Kidney Diseases ,Pharmacology (medical) ,Renal Insufficiency, Chronic ,Antioxidants ,Acetylcysteine - Abstract
Contrast-induced nephropathy (CIN) is a major complication of imaging in patients with chronic kidney disease (CKD). The publication of an academic randomized controlled trial (RCT; n = 83) reporting oral (N)-acetylcysteine (NAC) to reduce CIN led to 70 clinical trials, 23 systematic reviews, and 2 large RCTs showing no benefit. However, no mechanistic studies were conducted to determine how NAC might work; proposed mechanisms included renal artery vasodilatation and antioxidant boosting. We evaluated the proposed mechanisms of NAC action in participants with healthy and diseased kidneys. Four substudies were performed. Two randomized, double-blind, placebo-controlled, three-period crossover studies (n = 8) assessed the effect of oral and intravenous (i.v.) NAC in healthy kidneys in the presence/absence of iso-osmolar contrast (iodixanol). A third crossover study in patients with CKD stage III (CKD3) (n = 8) assessed the effect of oral and i.v. NAC without contrast. A three-arm randomized, double-blind, placebo-controlled parallel-group study, recruiting patients with CKD3 (n = 66) undergoing coronary angiography, assessed the effect of oral and i.v. NAC in the presence of contrast. We recorded systemic (blood pressure and heart rate) and renal (renal blood flow (RBF) and glomerular filtration rate (GFR)) hemodynamics, and antioxidant status, plus biomarkers of renal injury in patients with CKD3 undergoing angiography. Primary outcome for all studies was RBF over 8 hours after the start of i.v. NAC/placebo. NAC at doses used in previous trials of renal prophylaxis was essentially undetectable in plasma after oral administration. In healthy volunteers, i.v. NAC, but not oral NAC, increased blood pressure (mean area under the curve (AUC) mean arterial pressure (MAP): mean difference 29 h⋅mmHg, P = 0.019 vs. placebo), heart rate (28 h⋅bpm, P 0.001), and RBF (714 h⋅mL/min, 8.0% increase, P = 0.006). Renal vasodilatation also occurred in the presence of contrast (RBF 917 h⋅mL/min, 12% increase, P = 0.005). In patients with CKD3 without contrast, only a rise in heart rate (34 h⋅bpm, P = 0.010) and RBF (288 h⋅mL/min, 6.0% increase, P = 0.001) occurred with i.v. NAC, with no significant effect on blood pressure (MAP rise 26 h⋅mmHg, P = 0.156). Oral NAC showed no effect. In patients with CKD3 receiving contrast, i.v. NAC increased blood pressure (MAP rise 52 h⋅mmHg, P = 0.008) but had no effect on RBF (151 h⋅mL/min, 3.0% increase, P = 0.470), GFR (29 h⋅mL/min/1.73m², P = 0.122), or markers of renal injury. Neither i.v. nor oral NAC affected plasma antioxidant status. We found oral NAC to be poorly absorbed and have no reno-protective effects. Intravenous, not oral, NAC caused renal artery vasodilatation in healthy volunteers but offered no protection to patients with CKD3 at risk of CIN. These findings emphasize the importance of mechanistic clinical studies before progressing to RCTs for novel interventions. Thousands were recruited to academic clinical trials without the necessary mechanistic studies being performed to confirm the approach had any chance of working.
- Published
- 2022
- Full Text
- View/download PDF
170. A descriptive report of the rapid implementation of automated MRC-ICU calculations in the EMR of an academic medical center
- Author
-
Andrew J, Webb, Sandra, Rowe, and Andrea Sikora, Newsome
- Subjects
Pharmacology ,Academic Medical Centers ,Intensive Care Units ,Critical Illness ,Descriptive Report ,health services administration ,health care facilities, manpower, and services ,Health Policy ,education ,Electronic Health Records ,Humans ,Pharmacists ,health care economics and organizations - Abstract
Purpose Numerous clinical scoring tools exist for a variety of patient populations and disease states, but few tools provide information specifically designed for use by critical care pharmacists. The medication regimen complexity–intensive care unit (MRC-ICU) score was designed to provide high-level information about the complexity of critically ill patients’ medication regimens for use by critical care pharmacists. To date, implementation of this score in the electronic medical record (EMR) has not been reported. Summary Using an agile project management framework, the MRC-ICU score was rapidly implemented into an academic medical center’s EMR. The score is automatically calculated for all critically ill patients and is available for critical care pharmacists to triage patient review in their individual workflow. Reporting capabilities of the score also allow for granular complexity trending over time and between units, supplementing other objective measures of pharmacist workload. Conclusion The MRC-ICU score can be quickly implemented into the EMR for pharmacist use in real time. Future investigations into how pharmacists utilize this information and how to harness reporting capabilities for pharmacist workload assessment are warranted.
- Published
- 2022
- Full Text
- View/download PDF
171. The Ensemble Oceanic Niño Index
- Author
-
Eric J. Webb and Brian I. Magi
- Subjects
Atmospheric Science - Published
- 2022
- Full Text
- View/download PDF
172. Urotensin receptor in GtoPdb v.2023.1
- Author
-
David J. Webb, Hubert Vaudry, David Vaudry, Hervé Tostivint, Walter G. Thomas, Eliot H. Ohlstein, Margaret R. MacLean, Jérôme Leprince, David G. Lambert, Henry Krum, Adel Giaid, Alain Fournier, Stephen A. Douglas, and Anthony P. Davenport
- Subjects
General Medicine ,General Chemistry - Abstract
The urotensin-II (U-II) receptor (UT, nomenclature as agreed by the NC-IUPHAR Subcommittee on the Urotensin receptor [26, 36, 94]) is activated by the endogenous dodecapeptide urotensin-II, originally isolated from the urophysis, the endocrine organ of the caudal neurosecretory system of teleost fish [7, 93]. Several structural forms of U-II exist in fish and amphibians [94]. The goby orthologue was used to identify U-II as the cognate ligand for the predicted receptor encoded by the rat gene gpr14 [2, 20, 63, 69, 72]. Human urotensin-II, an 11-amino-acid peptide [20], retains the cyclohexapeptide sequence of goby U-II that is thought to be important in ligand binding [61, 53, 10]. This sequence is also conserved in the deduced amino-acid sequence of rat urotensin-II (14 amino-acids) and mouse urotensin-II (14 amino-acids), although the N-terminal is more divergent from the human sequence [19]. A second endogenous ligand for the UT has been discovered in rat [86]. This is the urotensin II-related peptide, an octapeptide that is derived from a different gene, but shares the C-terminal sequence (CFWKYCV) common to U-II from other species. Identical sequences to rat urotensin II-related peptide are predicted for the mature mouse and human peptides [32]. UT exhibits relatively high sequence identity with somatostatin, opioid and galanin receptors [94]. The urotensinergic system displays an unprecedented repertoire of four or five ancient UT in some vertebrate lineages and five U-II family peptides in teleost fish [91].
- Published
- 2023
- Full Text
- View/download PDF
173. Peptide Permeation across a Phosphocholine Membrane: An Atomically Detailed Mechanism Determined through Simulations and Supported by Experimentation
- Author
-
Alfredo E. Cardenas, Chad I. Drexler, Rachel Nechushtai, Ron Mittler, Assaf Friedler, Lauren J. Webb, and Ron Elber
- Subjects
Kinetics ,Phosphorylcholine ,Lipid Bilayers ,Materials Chemistry ,Thermodynamics ,Cell-Penetrating Peptides ,Physical and Theoretical Chemistry ,Article ,Surfaces, Coatings and Films - Abstract
Cell penetrating peptides (CPPs) facilitate translocation across biological membranes and are of significant biological and medical interest. Several CPPs can permeate into specific cells and organelles. We examine the incorporation and translocation of a novel anti-cancer CPP in a dioleoylphosphatidylcholine (DOPC) lipid bilayer membrane. The peptide, NAF-1(44-67), is a short fragment of a transmembrane protein, consisting of hydrophobic N terminal and charged C terminal segments. Experiments using fluorescently-labeled NAF-1(44-67) in ~100 nm DOPC vesicles and atomically detailed simulations conducted with Milestoning support a model in which a significant barrier for peptide-membrane entry is found at the interface between the aqueous solution and membrane. The initial step is the insertion of the N terminal segment and the hydrophobic helix into the membrane, passing the hydrophilic head groups. Both experiments and simulations suggest that the free energy difference in the first step of the permeation mechanism in which the hydrophobic helix crosses the phospholipid head groups is −0.4 kcal mol(−1) slightly favoring motion into the membrane. Milestoning calculations of the mean first passage time and the committor function underscore the existence of an early polar barrier followed by a diffusive barrierless motion in the lipid tail region. Permeation events are coupled to membrane fluctuations that are examined in detail. Our study opens the way to investigate in atomistic resolution the molecular mechanism, kinetics, and thermodynamics of CPP permeation to diverse membranes.
- Published
- 2023
174. Outcomes of livers from donation after circulatory death donors with extended agonal phase and the adjunct of normothermic regional perfusion
- Author
-
James A Richards, Rohit Gaurav, Sara S Upponi, Lisa Swift, Corrina Fear, Gwilym J Webb, Michael E D Allison, Christopher J E Watson, and Andrew J Butler
- Subjects
Surgery - Abstract
The liver performs important functions that are essential for life. If the liver fails, patients will die unless they receive a new liver from a donor (transplant). Unfortunately, there are not enough livers for everyone and some patients die while waiting for a suitable organ. This article describes a novel technique that allows resuscitation and testing of a potential donor liver so that more patients can safely receive a transplant.
- Published
- 2023
- Full Text
- View/download PDF
175. What physical mechanisms cause positive subtropical low cloud feedbacks in climate models?
- Author
-
Mark J Webb, Adrian Lock, and Tomoo Ogura
- Abstract
We investigate positive subtropical low cloud feedback mechanisms in climate models which have performed the CMIP6/CFMIP-3 AMIP and AMIP uniform +4K experiments while saving CFMIP-3 process diagnostics on model levels. Our analysis focuses on the trade cumulus/stratocumulus transition region between California and Hawaii, where positive low cloud feedbacks are present in the JJA season. We introduce a methodology to} test various positive cloud feedback mechanisms proposed in the literature as primary explanations for the low cloud responses in the models. Causal hypotheses are tested by comparing their predictions with the models’ responses of clouds, cloud controlling factors, boundary layer depth and temperature/humidity tendencies to climate warming. Changes in boundary layer depth, relative humidity in the cloud layer and humidity advection at the top of the boundary layer are shown to distinguish among the hypotheses considered. For the cases examined, our approach rules out 4/5 of the mechanisms considered in half of the models and 3/5 in the remainder. We argue that unambiguously identifying the positive feedback mechanisms operating in models will in some cases require intervention experiments designed to test specific hypotheses.
- Published
- 2023
- Full Text
- View/download PDF
176. Supplemental Figure 1. from VEGF Potentiates GD3-Mediated Immunosuppression by Human Ovarian Cancer Cells
- Author
-
Tonya J. Webb, Jonathan P. Schneck, Mathias Oelke, Robert L. Giuntoli, Simeon E. Goldblum, Sarah Spiegel, Sarah M. Temkin, and Irina V. Tiper
- Abstract
Ovarian cancer associated ascites contains soluble inhibitory factors. The ascites was cleared of cellular debris by centrifugation as previously described (18). (A, B) The ascites was filtered 0.2 micron filter and fractionated- f1: 50. (C) The ascites was treated with 50 μg/ml proteinase K at 37{degree sign}C for 1 hour and then incubated at 95{degree sign}C for 10min to heat inactivate the enzyme. The antigen presenting cells were treated with the clarified supernantants for 4 h at 37{degree sign}C, then washed extensively with PBS, and cocultured with NKT hybridomas for 20-24 h at 37{degree sign}C. Cytokine released (IL-2) was measured as an indication of NKT cell activation and was measured by standard sandwich ELISA.
- Published
- 2023
- Full Text
- View/download PDF
177. Appendix from The Added Value of Circulating Tumor Cell Enumeration to Standard Markers in Assessing Prognosis in a Metastatic Castration-Resistant Prostate Cancer Population
- Author
-
Howard I. Scher, Johann S. de Bono, Fred Saad, Iain J. Webb, David MacLean, Arturo Molina, Robert McCormack, Karim Fizazi, and Glenn Heller
- Abstract
Methodology Details
- Published
- 2023
- Full Text
- View/download PDF
178. Data from The Added Value of Circulating Tumor Cell Enumeration to Standard Markers in Assessing Prognosis in a Metastatic Castration-Resistant Prostate Cancer Population
- Author
-
Howard I. Scher, Johann S. de Bono, Fred Saad, Iain J. Webb, David MacLean, Arturo Molina, Robert McCormack, Karim Fizazi, and Glenn Heller
- Abstract
Purpose: Metastatic castration-resistant prostate cancer (mCRPC) is a heterogeneous disease for which better prognostic models for survival are needed. We examined the added value of circulating tumor cell (CTC) enumeration relative to common prognostic laboratory measures from patients with CRPC.Methods: Utility of CTC enumeration as a baseline and postbaseline prognostic biomarker was examined using data from two prospective randomized registration-directed trials (COU-AA-301 and ELM-PC4) within statistical models used to estimate risk for survival. Discrimination and calibration were used to measure model predictive accuracy and the added value for CTC enumeration in the context of a Cox model containing albumin, lactate dehydrogenase (LDH), PSA, hemoglobin, and alkaline phosphatase (ALK). Discrimination quantifies how accurately a risk model predicts short-term versus long-term survivors. Calibration measures the closeness of actual survival time to the predicted survival time.Results: Adding CTC enumeration to a model containing albumin, LDH, PSA, hemoglobin, and ALK (“ALPHA”) improved its discriminatory power. The weighted c-index for ALPHA without CTCs was 0.72 (SE, 0.02) versus 0.75 (SE, 0.02) for ALPHA + CTCs. The increase in discrimination was restricted to the lower-risk cohort. In terms of calibration, adding CTCs produced a more accurate model-based prediction of patient survival. The absolute prediction error for ALPHA was 3.95 months (SE, 0.28) versus 3.75 months (SE, 0.22) for ALPHA + CTCs.Conclusions: Addition of CTC enumeration to standard measures provides more accurate assessment of patient risk in terms of baseline and postbaseline prognosis in the mCRPC population. Clin Cancer Res; 23(8); 1967–73. ©2016 AACR.
- Published
- 2023
- Full Text
- View/download PDF
179. Supplemental Figure 2. from VEGF Potentiates GD3-Mediated Immunosuppression by Human Ovarian Cancer Cells
- Author
-
Tonya J. Webb, Jonathan P. Schneck, Mathias Oelke, Robert L. Giuntoli, Simeon E. Goldblum, Sarah Spiegel, Sarah M. Temkin, and Irina V. Tiper
- Abstract
The source of GD3 impacts CD1d-mediated antigen presentation.(A) LCD1d cells were treated with GD3 from different sources for 4 hours, then washed extensively and cocultured with NKT cell hybridomas. IL-2 was measured, as an indication of NKT cell activation, by standard cytokine ELISA. (B) Pretreatment of a-GalCer loaded aAPC with GD3. a-GalCer loaded aAPC were incubated for 4hr with either medium, GD3, GD2, or ovarian cancer-associated ascites. The aAPC were washed extensively and then cocultured with a Va14+ NKT cell hybridoma, N38-3C3. NKT cell recognition of CD1d was assessed by measuring IL-2 production in the supernatants by ELISA.
- Published
- 2023
- Full Text
- View/download PDF
180. Data from Phase I/II Trial of Orteronel (TAK-700)—an Investigational 17,20-Lyase Inhibitor—in Patients with Metastatic Castration-Resistant Prostate Cancer
- Author
-
David B. Agus, Iain J. Webb, Yuanjun Shi, Mitchell E. Gross, John Hainsworth, Omid Hamid, Gary R. MacVicar, Lowell Hart, Daniel Shevrin, Walter M. Stadler, Ajit Suri, David MacLean, and Robert Dreicer
- Abstract
Purpose: The androgen receptor pathway remains active in men with prostate cancer whose disease has progressed following surgical or medical castration. Orteronel (TAK-700) is an investigational, oral, nonsteroidal, selective, reversible inhibitor of 17,20-lyase, a key enzyme in the production of androgenic hormones.Experimental Design: We conducted a phase I/II study in men with progressive, chemotherapy-naïve, metastatic castration-resistant prostate cancer, and serum testosterone Results: In phase I (n = 26), no dose-limiting toxicities were observed and 13 of 20 evaluable patients (65%) achieved ≥50% prostate-specific antigen (PSA) decline from baseline at 12 weeks. In phase II (n = 97), 45 of 84 evaluable patients (54%) achieved a ≥50% decline in PSA and at 12 weeks, substantial mean reductions from baseline in testosterone (−7.5 ng/dL) and dehydroepiandrosterone-sulfate (−45.3 μg/dL) were observed. Unconfirmed partial responses were reported in 10 of 51 evaluable phase II patients (20%). Decreases in circulating tumor cells were documented. Fifty-three percent of phase II patients experienced grade ≥3 adverse events irrespective of causality; most common were fatigue, hypokalemia, hyperglycemia, and diarrhea.Conclusions: 17,20-Lyase inhibition by orteronel was tolerable and results in declines in PSA and testosterone, with evidence of radiographic responses. Clin Cancer Res; 20(5); 1335–44. ©2014 AACR.
- Published
- 2023
- Full Text
- View/download PDF
181. Supplementary Table 1 from Phase I/II Trial of Orteronel (TAK-700)—an Investigational 17,20-Lyase Inhibitor—in Patients with Metastatic Castration-Resistant Prostate Cancer
- Author
-
David B. Agus, Iain J. Webb, Yuanjun Shi, Mitchell E. Gross, John Hainsworth, Omid Hamid, Gary R. MacVicar, Lowell Hart, Daniel Shevrin, Walter M. Stadler, Ajit Suri, David MacLean, and Robert Dreicer
- Abstract
PDF file - 65K, Schedule of assessments.
- Published
- 2023
- Full Text
- View/download PDF
182. Supplementary Figure 1 from Molecular Identification of GD3 as a Suppressor of the Innate Immune Response in Ovarian Cancer
- Author
-
Jonathan P. Schneck, Mathias Oelke, Christian Kurts, Moriya Tsuji, Ronald L. Schnaar, Christoph Heuser, Pablo H.H. Lopez, Robert L. Giuntoli, Xiangming Li, and Tonya J. Webb
- Abstract
PDF file - 225K, Schematic of Ganglioside GD3 and other glycolipids used or referred to in this paper
- Published
- 2023
- Full Text
- View/download PDF
183. Global and regional climate feedbacks in response to uniform warming and cooling
- Author
-
Mark Adam Ringer, Alejandro Bodas-Salcedo, and Mark J Webb
- Abstract
We compare the radiative feedbacks resulting from a uniform warming and cooling of sea surface temperatures by 4 K in an ensemble of global climate models. The global-mean net feedback is less stabilising in response to warming in all nine models. This is primarily due to a stronger tropical water vapour feedback, with a smaller contribution from the shortwave cloud feedback. The zonal-mean feedbacks are similarly robust across the ensemble. In the extra-tropics, more positive shortwave cloud feedback under warming is associated with further poleward migration of the mean Southern Hemisphere jet latitude in some models. However, additional experiments with an aquaplanet version of the HadGEM3 model suggest that the asymmetry of the jet shift is not driving that in the cloud feedbacks at these latitudes. In the tropics, stronger water vapour feedback under warming is offset by a weaker shortwave cloud feedback. The result is that the ensemble spread in the differences between the global feedbacks under warming and cooling is mainly determined by their differences in the tropics. The spatial distribution of the feedbacks largely reflects the zonal mean behaviour, although there is considerable intermodel variation in the regional cloud feedbacks, particularly in the tropical shortwave cloud feedback. Comparison with CO2- and solar-forced coupled experiments suggests that the global-mean longwave cloud feedback is nearly invariant to warming and cooling, regardless of the nature of the forcing. The shortwave cloud feedback is generally more positive under warming in the coupled models, consistent with the uniform SST perturbation experiments.
- Published
- 2023
- Full Text
- View/download PDF
184. Concordance Between Initial Presumptive and Final Adjudicated Diagnoses of Infection Among Patients Meeting Sepsis-3 Criteria in the Emergency Department
- Author
-
Gabriel A Hooper, Carolyn J Klippel, Sierra R McLean, Edward A Stenehjem, Brandon J Webb, Emily R Murnin, Catherine L Hough, Joseph R Bledsoe, Samuel M Brown, and Ithan D Peltan
- Subjects
Microbiology (medical) ,Infectious Diseases - Abstract
BackgroundGuidelines emphasize rapid antibiotic treatment for sepsis, but infection presence is often uncertain at initial presentation. We investigated the incidence and drivers of false-positive presumptive infection diagnosis among emergency department (ED) patients meeting Sepsis-3 criteria.MethodsFor a retrospective cohort of patients hospitalized after meeting Sepsis-3 criteria (acute organ failure and suspected infection including blood cultures drawn and intravenous antimicrobials administered) in 1 of 4 EDs from 2013 to 2017, trained reviewers first identified the ED-diagnosed source of infection and adjudicated the presence and source of infection on final assessment. Reviewers subsequently adjudicated final infection probability for a randomly selected 10% subset of subjects. Risk factors for false-positive infection diagnosis and its association with 30-day mortality were evaluated using multivariable regression.ResultsOf 8267 patients meeting Sepsis-3 criteria in the ED, 699 (8.5%) did not have an infection on final adjudication and 1488 (18.0%) patients with confirmed infections had a different source of infection diagnosed in the ED versus final adjudication (ie, initial/final source diagnosis discordance). Among the subset of patients whose final infection probability was adjudicated (n = 812), 79 (9.7%) had only “possible” infection and 77 (9.5%) were not infected. Factors associated with false-positive infection diagnosis included hypothermia, altered mental status, comorbidity burden, and an “unknown infection source” diagnosis in the ED (odds ratio: 6.39; 95% confidence interval: 5.14–7.94). False-positive infection diagnosis was not associated with 30-day mortality.ConclusionsIn this large multihospital study
- Published
- 2023
- Full Text
- View/download PDF
185. Abstract TP162: Age, Weight, And Prior Stroke Predicts Ischemic Stroke Despite Direct Acting Oral Anticoagulant Use In Patients With Atrial Fibrillation
- Author
-
Syed Daniyal Asad, Lara Carvalho De Oliveira, Ana Ponciano, Andrew J Webb, Pinar Yilmaz, viswanathan anand, and Aneesh Singhal
- Subjects
Advanced and Specialized Nursing ,Neurology (clinical) ,Cardiology and Cardiovascular Medicine - Abstract
Introduction: Direct-acting oral anticoagulants (DOACs) and warfarin are standard of care for secondary prevention of ischemic stroke (IS) in persons with atrial fibrillation (AF). However, despite adequate anticoagulation (AC), patients may still experience recurrent IS. We aimed to study the characteristics of patients who developed IS despite therapeutic AC, specifically with DOACs. Methods: Between 2012 and 2021, patients admitted at our hospital with IS despite adequate AC for AF were enrolled. Clinical variables collected included National Institute of Health Stroke Scale (NIHSS), CHA 2 DS 2 -VASc and modified Rankin Score (mRS) at admission. Baseline characteristics were compared between patients taking DOACs and warfarin. Logistic regression analyses were performed to identify predictors of IS in patients using DOACs. Results: A total of 595 patients were included. Of these, 291 patients (48.9%) were on DOACs with a mean age of 75.21 and 43.9% were female. The median CHA 2 DS 2 -VASc and NIHSS score in the DOAC group was 4 and 6, respectively. Compared to those on Warfarin, patients on DOACs were younger (75.21 vs. 78.99 p < 0.001), more likely to be men (55.3% vs. 45.2% p = 0.01) and had higher rates of prior TIA/IS (37.5% vs. 29.3% p = 0.04). Both groups had similar rates of hemorrhagic transformation, but more patients in the DOAC group were on antiplatelet agents concomitantly (21% vs. 6.9% p < 0.001). The most prescribed DOAC was apixaban (66.3%) and cardioembolism was the most common stroke etiology (63.6%), followed by cryptogenic, which was significantly higher in the DOAC group (18.2% vs. 8.3% p = 0.02). Notably, DOAC failure in preventing IS was associated with younger age, overweight/obesity, and prior TIA/IS (Table) . Conclusions: IS despite the use of DOACs is more likely to occur in younger people with prior TIA/IS and obesity. Focusing on preventative strategies and risk factor control for competing mechanisms in this subgroup may help prevent IS recurrence.
- Published
- 2023
- Full Text
- View/download PDF
186. Revisiting Implicit Finite Difference Schemes for Three-Dimensional Room Acoustics Simulations on GPU.
- Author
-
Brian Hamilton, Stefan Bilbao, and Craig J. Webb
- Published
- 2014
187. Online parameter estimation via real-time replanning of continuous Gaussian POMDPs.
- Author
-
Dustin J. Webb, Kyle Lawson Crandall, and Jur van den Berg
- Published
- 2014
- Full Text
- View/download PDF
188. Relative impacts of different grade scales on student success in introductory physics
- Author
-
David J. Webb, Cassandra A. Paul, and Mary K. Chessey
- Subjects
Special aspects of education ,LC8-6691 ,Physics ,QC1-999 - Abstract
In deciding on a student’s grade in a class, an instructor generally needs to combine many individual grading judgments into one overall judgment. Two relatively common numerical scales used to specify individual grades are the 4-point scale (where each whole number 0–4 corresponds to a letter grade) and the percent scale (where letter grades A through D are uniformly distributed in the top 40% of the scale). This paper uses grading data from a single series of courses offered over a period of 10 years to show that the grade distributions emerging from these two grade scales differed in many ways from each other. Evidence suggests that the differences are due more to the grade scale than to either the students or the instructors. One major difference is that the fraction of students given grades less than C- was over 5 times larger when instructors used the percent scale. The fact that each instructor who used both grade scales gave more than 4 times as many of these low grades under percent scale grading suggests that the effect is due to the grade scale rather than the instructor. When the percent scale was first introduced in these courses in 2006, one of the authors of this paper, who is also one of the instructors in this dataset, had confidently predicted that any changes in course grading would be negligible. They were not negligible, even for this instructor.
- Published
- 2020
- Full Text
- View/download PDF
189. Parametrization of speckle intensity correlations over object position for coherent sensing and imaging in heavily scattering random media
- Author
-
Qiaoen Luo and Kevin J. Webb
- Subjects
Physics ,QC1-999 - Abstract
A statistical treatment of speckle correlations as a function of the position of a moving object is shown to provide access to object information through thick and heavily scattering random media. Experiments for a patchlike object of varying size and for varying degree of background scatter are explained using a model, and an experimental study allows evaluation of key attributes. Given a sufficient signal-to-noise ratio, adequate coherence, and developed field statistics, measured speckle intensity patterns from a set of object positions can allow high-resolution imaging deep into an obscuring medium and the medium's scattering strength can be gauged quantitatively with calibration. This enables new opportunities in application domains such as optical sensing, material inspection, and deep tissue in vivo imaging.
- Published
- 2020
- Full Text
- View/download PDF
190. Effect of Rising Temperature on Lyme Disease: Ixodes scapularis Population Dynamics and Borrelia burgdorferi Transmission and Prevalence
- Author
-
Dorothy Wallace, Vardayani Ratti, Anita Kodali, Jonathan M. Winter, Matthew P. Ayres, Jonathan W. Chipman, Carissa F. Aoki, Erich C. Osterberg, Clara Silvanic, Trevor F. Partridge, and Mariana J. Webb
- Subjects
Infectious and parasitic diseases ,RC109-216 ,Microbiology ,QR1-502 - Abstract
Warmer temperatures are expected to increase the incidence of Lyme disease through enhanced tick maturation rates and a longer season of transmission. In addition, there could be an increased risk of disease export because of infected mobile hosts, usually birds. A temperature-driven seasonal model of Borrelia burgdorferi (Lyme disease) transmission among four host types is constructed as a system of nonlinear ordinary differential equations. The model is developed and parametrized based on a collection of lab and field studies. The model is shown to produce biologically reasonable results for both the tick vector (Ixodes scapularis) and the hosts when compared to a different set of studies. The model is used to predict the response of Lyme disease risk to a mean annual temperature increase, based on current temperature cycles in Hanover, NH. Many of the risk measures suggested by the literature are shown to change with increased mean annual temperature. The most straightforward measure of disease risk is the abundance of infected questing ticks, averaged over a year. Compared to this measure, which is difficult and resource-intensive to track in the field, all other risk measures considered underestimate the rise of risk with rise in mean annual temperature. The measure coming closest was “degree days above zero.” Disease prevalence in ticks and hosts showed less increase with rising temperature. Single field measurements at the height of transmission season did not show much change at all with rising temperature.
- Published
- 2019
- Full Text
- View/download PDF
191. Sphingosine Kinase Blockade Leads to Increased Natural Killer T Cell Responses to Mantle Cell Lymphoma
- Author
-
Michael S. Lee, Wenji Sun, and Tonya J. Webb
- Subjects
Mantle cell lymphoma ,NKT cells ,sphingosine kinase ,sphingosine-1-phosphate ,cardiolipin ,Cytology ,QH573-671 - Abstract
Mantle cell lymphoma (MCL) is an aggressive subtype of non-Hodgkin’s lymphoma. Despite being responsive to combination chemotherapy, median survival remains around 5 years due to high rates of relapse. Sphingolipid metabolism regulates MCL survival and proliferation and we found that sphingosine-1-phosphate (S1P) is upregulated in MCL cells. Therapeutic targeting of the S1P1 receptor or knockdown of sphingosine kinase 1 (SK1), the enzyme responsible for generating S1P, in human MCL cells results in a significant increase in Natural Killer T (NKT) cell activation. NKT cells recognize glycolipid antigens presented on CD1d and can reduce MCL tumor burden in vivo. Lipidomic studies identified cardiolipin, which has been reported to bind to CD1d molecules, as being upregulated in SK1 knockdown cells. We found that the pretreatment of antigen presenting cells with cardiolipin leads to increased cytokine production by NKT cell hybridomas. Furthermore, the ability of cardiolipin to activate NKT cells was dependent on the structure of its acyl chains. Collectively, these studies delineate novel pathways important for immune recognition of malignant cells and could lead to the development of new treatments for lymphoma.
- Published
- 2020
- Full Text
- View/download PDF
192. The self-perception of flexible coping with stress: A new measure and relations with emotional adjustment
- Author
-
Melanie J. Zimmer-Gembeck, Ellen A. Skinner, Kathryn L. Modecki, Haley J. Webb, Alex A. Gardner, Tanya Hawes, and Ronald M. Rapee
- Subjects
stress ,coping ,internalizing symptoms ,general self-worth ,Psychology ,BF1-990 ,Neurophysiology and neuropsychology ,QP351-495 - Abstract
Objective: To develop a theoretically grounded measure of self-perceived ability to cope with stress in a flexible (i.e. non-rigid) manner and test associations with well-being. Method: Participants in Study 1 (N = 395, 17–56 years) completed surveys to report flexible coping with stress and well-being. In Studies 2 (N = 645, 17–27 years) and 3 (N = 558, 12–19 years), youth completed surveys with the 18-item Self-Perception of Flexible Coping with Stress (SFCS), and coping and well-being measures. Results: Three SFCS factors were supported, which aligned to the conceptualization including multiple coping strategy use (multiple CSU), coping rigidity, and situational coping. The SFCS subscales had good reliability and were modestly correlated with each other. Also, multiple CSU and situational coping were linked to better mental health, emotion regulation, greater use of adaptive coping strategies, and better self-worth. Coping rigidity was linked with more symptoms of anxiety and depression, more emotion dysregulation, greater use of problem-coping behaviors, and lower self-worth. Older participants reported they were higher in flexible coping and sex differences in multiple CSU and situational coping were found. Conclusions. The SFCS, a measure of the deployment of a coping “toolbox” that could allow individuals to respond adroitly to stressors, is reliable, valid, and associated with well-being.
- Published
- 2018
- Full Text
- View/download PDF
193. Gastrointestinal and Psychiatric Symptoms Among Children and Adolescents With Autism Spectrum Disorder
- Author
-
Emily Neuhaus, Raphael A. Bernier, See Wan Tham, and Sara J. Webb
- Subjects
autism ,gastrointestinal ,comorbidity ,internalizing ,externalizing ,self-injury ,Psychiatry ,RC435-571 - Abstract
Individuals with autism spectrum disorder (ASD) are at heightened risk of psychiatric comorbidities across the lifespan, including elevated rates of internalizing, externalizing, and self-injurious behaviors. Identification of medical comorbidities that contribute to these concerns may elucidate mechanisms through which psychiatric concerns arise, as well as offer additional avenues for intervention. Gastrointestinal (GI) conditions are of particular interest, as they are prevalent among those with ASD, may share genetic or neurobiological etiologies with the core features of ASD, and are linked with psychiatric difficulties in the general population. In this paper, we draw on data from nearly 2,800 children and adolescents with ASD within the Simons Simplex Collection to characterize the unique contributions of (1) autism symptoms, (2) psychosocial factors (child's age, sex, verbal and nonverbal IQ, adaptive behavior, race, and household income), and (3) GI concerns with respect to multiple psychiatric outcomes. Multiple regression models revealed unique contributions of ASD symptoms and multiple psychosocial factors such as verbal IQ, adaptive behavior, and family income to internalizing, externalizing, and self-injurious behavior. In general, higher levels of psychiatric symptoms were associated with more ASD symptoms, higher verbal IQ, lower adaptive behavior skills, and lower family income. Furthermore, levels of GI symptoms accounted for unique variance in psychiatric outcomes over and above these other factors, linking increased GI problems with increased psychiatric symptoms in children with ASD. Taken together, results indicate that the presence and quantity of GI symptoms should be considered when evaluating psychiatric and behavioral concerns among children with ASD, and that treatment of GI conditions may be an important component in alleviating a broad array of mental health concerns in this group.
- Published
- 2018
- Full Text
- View/download PDF
194. Dengue viruses cleave STING in humans but not in nonhuman primates, their presumed natural reservoir
- Author
-
Alex C Stabell, Nicholas R Meyerson, Rebekah C Gullberg, Alison R Gilchrist, Kristofor J Webb, William M Old, Rushika Perera, and Sara L Sawyer
- Subjects
zoonosis ,viral reservoir ,interferon ,Medicine ,Science ,Biology (General) ,QH301-705.5 - Abstract
Human dengue viruses emerged from primate reservoirs, yet paradoxically dengue does not reach high titers in primate models. This presents a unique opportunity to examine the genetics of spillover versus reservoir hosts. The dengue virus 2 (DENV2) - encoded protease cleaves human STING, reducing type I interferon production and boosting viral titers in humans. We find that both human and sylvatic (reservoir) dengue viruses universally cleave human STING, but not the STING of primates implicated as reservoir species. The special ability of dengue to cleave STING is thus specific to humans and a few closely related ape species. Conversion of residues 78/79 to the human-encoded ‘RG’ renders all primate (and mouse) STINGs sensitive to viral cleavage. Dengue viruses may have evolved to increase viral titers in the dense and vast human population, while maintaining decreased titers and pathogenicity in the more rare animals that serve as their sustaining reservoir in nature.
- Published
- 2018
- Full Text
- View/download PDF
195. A new method for respiratory-volume monitoring based on long-period fibre gratings.
- Author
-
Marija Petrovic, Jovana Petrovic, Goran Simic, Igor Ilic, Aleksandar Danicic, Miodrag Vukcevic, Bosko Bojovic, Ljupco Hadzievski, Thomas Allsop, and David J. Webb
- Published
- 2013
- Full Text
- View/download PDF
196. Kinodynamic RRT*: Asymptotically optimal motion planning for robots with linear dynamics.
- Author
-
Dustin J. Webb and Jur van den Berg
- Published
- 2013
- Full Text
- View/download PDF
197. Non-detection of mycoviruses in amphibian chytrid fungus (Batrachochytrium dendrobatidis) from Australia
- Author
-
Alexandra A. Roberts, Lee Berger, Luís Felipe Toledo, Marcia Merces, Tiffany A. Kosch, Stephen J. Wylie, Lee F. Skerratt, and Rebecca J. Webb
- Subjects
Batrachochytrium ,Amphibian ,High prevalence ,biology ,Batrachochytrium dendrobatidis ,Australia ,Virulence ,Zoology ,Fungus ,Fungal Viruses ,biology.organism_classification ,Amphibians ,Chytridiomycota ,Infectious Diseases ,biology.animal ,Genetics ,Mycovirus ,Animals ,Non detection ,Chytridiomycosis ,Ecology, Evolution, Behavior and Systematics - Abstract
Mycoviruses may influence the pathogenicity of disease-causing fungi. Although mycoviruses have been found in some chytrid fungi, limited testing has not detected them in Batrachochytrium dendrobatidis (Bd), the cause of the devastating amphibian disease, chytridiomycosis. Here we conducted a survey for mycovirus presence in 38 Bd isolates from Australia (n = 31), Brazil (n = 5) and South Korea (n = 2) with a combination of modern high-throughput sequencing and conventional dsRNA cellulose chromatography. Mycoviruses were not detected in any isolates. This result was unexpected, given the long evolutionary history of Bd, as well as the high prevalence of mycoviruses in related fungal species. Given our widespread sampling in Australia and the limited number of Bd introductions, we suggest that mycoviruses are uncommon or absent from Australian Bd. Testing more isolates from regions where Bd originated, as well as regions with high diversity or low fungal virulence may identify mycoviruses that could aid in disease control.
- Published
- 2022
- Full Text
- View/download PDF
198. Combining Neural Networks and Context-Driven Search for On-line, Printed Handwriting Recognition in the Newton.
- Author
-
Larry S. Yaeger, Brandyn J. Webb, and Richard F. Lyon
- Published
- 2012
- Full Text
- View/download PDF
199. De‐risking Clinical Trials: The BIAL Phase I Trial in Foresight
- Author
-
Adam F. Cohen, Jeroen van Smeden, and David J. Webb
- Subjects
Pharmacology ,Pharmacology (medical) - Published
- 2021
- Full Text
- View/download PDF
200. Highly Efficient Side-Coupled Acousto-Optic Modulation of a Suspended Core Fiber Bragg Grating
- Author
-
Egor Manuylovich, Manfred Rothhardt, Martin Becker, Namita Sahoo, Ricardo E. Silva, David J. Webb, and Hartmut Bartelt
- Subjects
Optical fiber ,Birefringence ,Materials science ,business.industry ,Orthogonal polarization spectral imaging ,Physics::Optics ,Polarization (waves) ,Atomic and Molecular Physics, and Optics ,Electronic, Optical and Magnetic Materials ,law.invention ,Amplitude modulation ,Core (optical fiber) ,Optics ,Fiber Bragg grating ,law ,Modulation ,Electrical and Electronic Engineering ,business - Abstract
We demonstrate acousto-optic modulation of a fiber Bragg grating in a birefringent suspended core fiber up to frequencies of 5.2 MHz for the first time. At acoustic resonances lower than 820 kHz, the reflectivity of the orthogonal polarization modes is electrically switched to a superposed reflection band with a maximum modulation depth of 51% at 10 V. The wavelength peak of the polarization modes is dynamically shifted by tuning the driven electrical signal from 1.92 to 5.2 MHz. A novel side-coupled based acousto-optic device is demonstrated, indicating new possibilities for ultracompact, fast and efficient all-fiber integrated devices.
- Published
- 2021
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.