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We investigate the carbon dynamics in Guanabara Bay, an eutrophic tropical coastal embayment surrounded by the megacity of Rio de Janeiro (southeast coast of Brazil). Nine sampling campaigns were conducted for dissolved, particulate and total organic carbon (DOC, POC and TOC), dissolved inorganic carbon (DIC), partial pressure of CO2 (pCO(2)), chlorophyll a (Chl a), pheo-pigments and ancillary parameters. Highest DOC, POC and Chl a concentrations were found in confined-shallow regions of the bay during the summer period with strong pCO(2) undersaturation, and DOC reached 82 mg L-1, POC 152 mg L-1, and Chl a 800 mu g L-1. Spatially and temporally, POC and DOC concentrations varied positively with total pigments, and negatively with DIC. Strong linear correlations between these parameters indicate that the production of TOC translates to an equivalent uptake in DIC, with 85% of the POC and about 50% of the DOC being of phytoplanktonic origin. Despite the shallow depths of the bay, surface waters were enriched in POC and DOC relative to bottom waters in periods of high thermohaline stratification. The seasonal accumulation of phytoplankton-derived TOC in the surface waters reached about 105 g C m(-2) year(-1), representing between 8 and 40% of the net primary production. The calculated turnover time of organic carbon was 117 and 34 days during winter and summer, respectively. Our results indicate that eutrophication of coastal bays in the tropics can generate large stocks of planktonic biomass and detrital organic carbon which are permanently being produced and partially degraded and buried in sediments.

Aging is a major worldwide medical challenge. Not surprisingly, identifying drugs and compounds that extend lifespan in model organisms is a growing research area. Here, we present DrugAge (http://genomics.senescence.info/drugs/), a curated database of lifespan-extending drugs and compounds. At the time of writing, DrugAge contains 1316 entries featuring 418 different compounds from studies across 27 model organisms, including worms, flies, yeast and mice. Data were manually curated from 324 publications. Using drug–gene interaction data, we also performed a functional enrichment analysis of targets of lifespan-extending drugs. Enriched terms include various functional categories related to glutathione and antioxidant activity, ion transport and metabolic processes. In addition, we found a modest but significant overlap between targets of lifespan-extending drugs and known aging-related genes, suggesting that some but not most aging-related pathways have been targeted pharmacologically in longevity studies. DrugAge is freely available online for the scientific community and will be an important resource for biogerontologists., Aging Cell, 16 (3), ISSN:1474-9718, ISSN:1474-9728, ISSN:1474-9726

Toxins are chemical substances of biological origin, and they can be considered chemical or biological warfare agents. Four toxins are included in the list of bioterrorism agents: botulinum toxin (BoNT), saxitocin, ricin, and staphylococcal enterotoxin B. BoNT is included in Category A, while the other 3 are considered Category B. Botulism is a potentially fatal disease caused solely by the action of serologically distinct neurotoxins (BoNT/A, /B, /C, /D, /E, /F/ or /G) that prevent acetylcholine release at neuromuscular junctions, resulting in paralysis. The Emergency Response and Biopreparedness Unit is the Portuguese national reference laboratory for biological events or catastrophes and has skilled professionals, know-how, Biosafety Level (BSL)-3 facilities, capacity to work 24 hours per day, 7 days per week, and trained human resources to increase lab capacity in emergency situations. The laboratory diagnosis capacity includes the detection of bacteria, viruses, and toxins that are considered bioterrorism agents, using microbiology, immunology, and molecular biology techniques. Participation in European projects such as EquaTox allowed the upgrade of biosafety procedures and technical skills and the implementation of the best techniques to detect the biological toxins that can be used as biological weapons. N/A

Small ruminant production is a common agricultural activity worldwide. However, studies on the fungal microbiota of these animals are scarce. Therefore, this study aimed at isolating yeasts from goats and sheep and evaluating the antifungal susceptibility of the recovered Candida albicans. A total of 120 animals from farms in Ceará State, Brazil, were assessed in this study. The samples were collected from nasal, oral and rectal cavities with sterile swabs. Candida spp., Trichosporon spp. and Rhodotorula spp. were isolated from small ruminants. Resistance to three azole drugs was observed in C. albicans. In summary, Candida spp. were predominantly observed as part of the microbiota of the nasal, oral and rectal cavities of small ruminants, including azole-resistant strains of C. albicans.

Aims: The aim of this study was to analyse the in vitro activity of farnesol alone and combined with the antibacterial drugs amoxicillin, doxycycline, ceftazidime and sulfamethoxazole – trimethoprim against Burkholderia pseudomallei biofilms. Methods and Results: Susceptibility was assessed by the broth microdilution test and cell viability was re ad with the oxid ation–reduction indicator dye resazurin. The biofilms were evaluated through three microscopic techniques (optical, confocal and electronic microscopy). The minimum biofilm erradication concentration (MBEC) for farnesol was 75–2400 mmol l 1 . In addition, farnesol significantly reduced the MBEC values for ceftazidime, amoxicillin, doxycycline and sulfamethoxazole–trimethoprim by 256, 16, 4 and 4 times respectively (P < 005). Optical, confocal and electronic microscopic analyses of farnesol-treated B. pseudomallei biofilms demonstrated that this compound damages biofilm matrix, probably facilitating antimicrobial pe netration in the biofi lm stru cture. Conclusions: This study demonstrated the effectiveness of farnesol against B. pseudomallei biofilms and its potentiating effect on the activity of antibacterial drugs, in particular ceftazidime, amoxicillin, doxycycline and sulfamethoxazole–trimethoprim. Significance and Impact of the Study: The intrinsic antimicrobial resistance of B. pseudomallei is a serious challenge for the treatment of melioidosis. Thus, this paper reports the inhibitory potential of farnesol against B. pseudomallei biofilms, as well as highlights the favourable pharmacological interaction of farnesol with antibiotics tested, not only on cell viability, but also in the structural morphology of biofilms.

Climatic conditions are one of the most important factors affecting hydrological processes in fluvial systems. Higher discharges are responsible for higher erosion, greater transport, and also higher deposition. Consequently, sediment accumulation in Amazonia floodplain river-connected lakes can be directly related to hydrological patterns of the Amazon River mainstream. In this context, we analyzed five sediment cores taken in two floodplain systems situated in the lower Amazon River, to investigate sediment accumulation patterns during the Holocene. Our records show abrupt fluctuations in sedimentation rates in lakes that can reach more than 2 cm/yr during some periods. We find that in all cores, sediment stratigraphy is characterized by packages of sediments of uniform age, which are typically 10-80 cm thick and present a variegated color. The C-14 age of the upper package is about 2700 cal yr BP. During this abrupt event, sediment accumulation rates in floodplain lakes can be at least 200 times higher than those of "normal" periods. This sedimentation event is interpreted as being the consequence of one or several successive extreme floods. The 2700 cal yr BP event has been also observed in other sites in South America and other regions in the world, although different impacts can be observed in each system. This event probably corresponds to a conjunction of favorable conditions for extreme Amazon discharge associated with the Middle to Late Holocene increase of austral summer insolation and shifts of the Intertropical Convergence Zone (ITCZ) from northern to southern positions. In this context, a marked negative peak in solar irradiance at 2700 cal yrs BP seems to have provoked cooling on the continents and a southward shift of the ITCZ associated with a probable reduction in the Atlantic Meridian Overturning Circulation.

Interpreting the geological record of Amazon biomass combustion requires comparing charcoal accumulation rates in various biomes at different time scales. Charcoal accumulation rates, a proxy for palaeofire records, were obtained in sediment cores from Amazon lakes surrounded by several vegetation types and from a reservoirs in an intense land use change region. The records presented in this study were obtained in the following areas i) a reservoirs in Alta Floresta region (northern Mato Grosso State); ii) Lago do Saci (southern Pará State), a lake close to Alta Floresta and located at the southern border of Pará State; iii) a bog in an ecotone area in the Humaitá region (southern Amazonas State); iv) lakes in lateritic iron crust of the Carajás Hills (southeastern Pará State); v) Lago Comprido, a floodplain lake close to the Amazon River and surrounded by tropical rain forest (Monte Alegre, Pará State; vi) Lagoa da Pata in the Morro dos Seis Lagos alkaline complex (São Gabriel da Cachoeira, Amazonas State) and vii) Lago Caracaranã, a secluded lake in the northern Amazon cerrado (Roraima State). The highest charcoal accumulation rates were observed for modern records related to an intense change in land use at Alta Floresta, which had no precedent during the Holocene history of the Amazon. High charcoal accumulation rates that were observed in the Carajás region during low lake level phases in the Amazon in the mid-Holocene were comparable to those at the onset of the human settlement in Alta Floresta region. An increase in charcoal accumulation rate was observed in the late Holocene when the lake level was high, suggesting an interaction between climates and human presence. Low charcoal accumulation rates are typical of modern high rainfall environments, as observed in Lagoa da Pata where the environment is not susceptible to occurrences of wildfires even during relatively drier climatic phases. Low charcoal accumulation rates also exist in the relatively dry cerrado (savanna type) biome even during relatively dry phases in the Caracaranã region where the savanna-type vegetation biomass is lower and thus generates less charcoal particles than forest ecosystems.