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Long-term biological time series that monitor ecosystems across the ocean’s full water column are extremely rare. As a result, classic paradigms are yet to be tested. One such paradigm is that variations in coastal upwelling drive changes in marine ecosystems throughout the water column. We examine this hypothesis by using data from three multidecadal time series spanning surface (0 m), midwater (200 to 1,000 m), and benthic (~4,000 m) habitats in the central California Current Upwelling System. Data include microscopic counts of surface plankton, video quantification of midwater animals, and imaging of benthic seafloor invertebrates. Taxon-specific plankton biomass and midwater and benthic animal densities were separately analyzed with principal component analysis. Within each community, the first mode of variability corresponds to most taxa increasing and decreasing over time, capturing seasonal surface blooms and lower-frequency midwater and benthic variability. When compared to local wind-driven upwelling variability, each community correlates to changes in upwelling damped over distinct timescales. This suggests that periods of high upwelling favor increase in organism biomass or density from the surface ocean through the midwater down to the abyssal seafloor. These connections most likely occur directly via changes in primary production and vertical carbon flux, and to a lesser extent indirectly via other oceanic changes. The timescales over which species respond to upwelling are taxon-specific and are likely linked to the longevity of phytoplankton blooms (surface) and of animal life (midwater and benthos), which dictate how long upwelling-driven changes persist within each community. [ABSTRACT FROM AUTHOR]

The study and analysis of malacofauna from cores of bottom sediments and cores of the Azov spits showed the nature of the change during the transition from the Ancient Azovian to the New Azovian layers and the uneven distribution of communities in time and space. Shell material from littoral malacocenosis and shallow-water banks is the main component for the formation of spits. Based on a series of cores up to 25 m thick from the Dolgaya Spit, it is shown that its formation began about 2500 years ago, and carbonate material reflects the history of the development of the benthic fauna of the sea. [ABSTRACT FROM AUTHOR]

Background: Bivalves are benthic animals existing in coastal habitats, particularly mudflats and tidal. Because of their availability, rich protein content and cheaper cost, they contribute a major portion of the small-scale fishery resource worldwide. Limited information has been available on the food-feeding and habitat structures of bivalves along Indian waters. Therefore, the present investigation was carried out to know the food-feeding and habitat preferred by wedge clam, Donax cuneatus off Thoothukudi, Gulf of Mannar, India. Methods: Soil, water and wedge clam samples were collected from the selected site from September 2019 to March 2021 and soil texture, water quality parameters and gut contents were analyzed at the laboratory. Result: During the study period, salinity, water temperature, pH and dissolved oxygen (DO) were in the range from 31-37‰, 24- 28oC, 7.7-8.7 and 4.1-5.8 mg/l, respectively. Wedge clams were mainly observed at sandy beaches up to 10 cm in depth. Donax cuneatus mainly feeds on detritus (65%), followed by phytoplankton (31%) and zooplankton (4%). Hence, the diverse fluctuation of food particles, season-specific food and feeding biology and local environmental conditions at the studied region might be the responsible features for the availability of Donax cuneatus. [ABSTRACT FROM AUTHOR]

The alien shrimp Macrobrachium nipponense (De Haan, 1849 [in De Haan, 1833-1850]), oriental river prawn has been identified in the water bodies of the Ukrainian part of the Danube Delta for the first time. Diagnosis of the species is based on measurements of 35 specimens. Characteristic features: the dorsal side of rostrum armed by 12-13 teeth, with feathery setae between them, 3 (rarely 2) teeth located on the ventral side of rostrum. During 2019-2020, the freshwater shrimp, M. nipponense, has become a common element of the benthic fauna of the Kiliya arm of the Danube River. It is supported by regular registrations of numerous shrimp aggregations in different parts of the arm (from the 32nd to the 80th km of the main stream) since the summer of 2019. The record of this alien shrimp species potentially confirms its introduction from other water bodies of the North-Western Black Sea Coastal Area to the Danube Delta by the natural dispersion or the unauthorized introduction. Although the known records suggest an accidental introduction of this species into the area close to the lakes of the Lower Danube area, both hypotheses require further investigation and approbation. [ABSTRACT FROM AUTHOR]

This study was designed to examine the impacts of ark shell Scapharca subcrenata enhancement and suspended oyster Crassostrea sikamea farming on sediment properties and fauna communities in the benthic zone of Xiangshan Bay, China. Ark shell enhancement took place over 319 days, after which sediment samples were collected from each of the three treatment sites: the enhancement area, an oyster farm, and a control area. Sediments from the oyster farming area had significantly higher moisture and acid volatile sulfide content, and the highest Cu, Zn, Pb, and Cd concentrations in all three treatment areas. The ark shell enhancement area has the lowest total organic carbon. No significant difference was found between the mean grain size in each of the three areas. Benthic fauna communities in the ark shell enhancement area were similar to those in the control area. Among the 16 faunal taxa identified, Ruditapes philippinarum was the most abundant species, followed by Glycera onomichiensis and Musculus senhousia. Suspension feeders were not found in the sediment beneath the oyster rafts. Cluster analysis showed a distinct separation between the benthic fauna communities in the oyster farming area and the other two treatment areas. Ark shell enhancement was thus shown to have minimal impact on the benthic environment, while the raft-farmed oysters had significant effects on the sediment structure and the benthic fauna after more than ten years of farming. The differences between the impacts of ark shell enhancement and oyster farming could be attributed to the slowing of water flow caused by oyster rafts. [ABSTRACT FROM AUTHOR]

Prediction of biophysical processes under the conditions of a rapid change in the composition of the interacting components of a biosystem requires flexible approaches and a logical analysis of the direction, time, and level of strength of systemic interactions. It is unrealistic to construct a predictive model based on the methods developed by the author for organizing hybrid computing structures for a key component of a biophysical system (such a link is usually considered the most valuable population for the economy) without a scheme for the mutual influence of factors acting on the biotic environment. Direct interaction of the "predator–prey," "parasite–host," or "resource–consumer" equations does not fully describe the dynamics of a real biosystem, especially after invasions of aggressive species. This article is devoted to the application of cognitive formalisms of model structuring of conceptual information about the interaction of natural and anthropogenic factors based on the development of graph theory methods. The purpose of the work is to mathematically formalize how a change in one factor will affect the state of other components of biosystems. The new model allowed us to explore mediated interactions that are not always immediately visible, but are critical. To understand the processes after invasions, we will develop a method for analyzing the distribution of indirect effects in biosystems on directly disconnected components. The results of computational studies are logically followed step by step by a theoretical interpretation of the observed changes in the behavior of the model trajectory. A formal analysis of impulses in a sign digraph in the context of the studied situation of bioresources degradation in the Caspian Sea after a large-scale intervention in the biosystem and due to the penetration of the harmful stenophora Mnemiopsis leidyi has been carried out. It is shown that the choice of a mathematical approach to the description of the situation is successfully based on the results of the analysis of cycles of influence of ecological interlinkages. Previously unaccounted-for links that led to the low efficiency of attempts to artificially reproduce bioresources were revealed. It was confirmed on the basis of the impulse process in the cognitive graph that the purposeful introduction of alien mollusks from the Black Sea into the Caspian Sea to increase the biomass of bottom fauna was one of the factors in the degradation of valuable biological resources with an increase in the level of the Caspian Sea. Alien mollusks (Abra ovata, Mytilaster lineatus) replaced the native benthic fauna. At the end of the 1980s, the salinity of the Northern Caspian decreased; then, the invaders adapted to more saline water drastically reduced the biomass. Competition in the trophic chains of unstable biosystems should not be aggravated in order to increase their productivity for valuable populations. The mass release of juveniles of valuable fish is not a panacea for the degradation of the entire Caspian biosystem. The results of the impact distribution analysis in the cognitive graph are applied to the original hybrid dynamic system for modeling the efficiency of artificial reproduction of the Caspian sturgeon. The model showed that degradation of the Caspian biosystem could have been avoided as early as 2005. [ABSTRACT FROM AUTHOR]

Hydrobiological surveys (plankton and benthos, including snow crab) were carried out in the southwestern region of the Chukchi Sea in the summer of 2003–2020. At the western, eastern, and northern edges of C. opilio distribution area in the Chukchi Sea, the abundance of crabs was five to ten times lower due to the limit of the species tolerance to hydrological factors and shortage of food resources, low mass of zoobenthos. Aggregations of snow crab C. opilio in northern regions of the Chukchi and the East Siberian seas can be considered dependent on replenishment from southern regions of the Chukchi Sea. The southern regions of the Chukchi Sea are some kinds of the nursery for development and growth of snow crab larvae and juveniles until 1–2 years age, from where they migrate into northern deeper regions of the Chukchi Sea, and then farther to the northeastern region of the East-Siberian Sea. [ABSTRACT FROM AUTHOR]

Three essential questions remain unresolved about the present Antarctic biota: its antiquity, origin, and ubiquity. Some benthic animals are capable of active self-dispersal following shallow corridors between islands. Identifying and characterizing the biota in such corridors is fundamental for biogeographic studies and the delimitation of priority sites to conserve biodiversity. The Scotia Arc provides an example of such passages, being a system of islands and underwater ridges connecting the Magellan Region to the Antarctic Peninsula and South Shetland Islands (Maritime Antarctic). Specimens of the free-living flatworm Orthoplana bregazzii Karling 1973 (Proseriata, Otoplanidae) were obtained in King George Island (South Shetland Islands). This is the first report of the family Otoplanidae from Antarctica, and the first rediscovery of the species 50 years after its original description. The present article provides a complete description of the Antarctic material of O. bregazzii, complements its original description, and provides an identification key to the species of Orthoplana. We analyze the distribution of the genus and species and argue that the range expansion reported here could be the result of a recent, successful colonization event. This work, therefore, gives insights into the systematics and biogeography of one of the lesser-known groups in the Antarctic fauna. [ABSTRACT FROM AUTHOR]

Quantifying the flow resistance in step-pool streams is of importance for studying the restoration of benthic animals and bedload transport. The Darcy–Weisbach friction factor of the total flow resistance is partitioned into components associated with grains, spills, and loose-packed particles. By extending the two-dimensional hydraulic radius, a new proposed roughness height is applied to evaluate resistance components induced by spills and loose-packed particles. Three morphological patterns induced by different-magnitude floods can be classified to form different flow resistance components, depending on the morphological variation. The three components varying with hydraulic and geometric parameters by considering the closest-1 NSEI and smallest RMSE and MRE have been examined. It is found that the grain resistance factor component, in comparison with other factors, has a slight impact on hydraulic parameters. Hydraulic and geometric parameters have a significant influence on the spill resistance component, accounting for the main proportion of the total resistance. The resistance associated with loose-packed particles correlates with parameters due to the initial random movement of particles and abundant sources. [ABSTRACT FROM AUTHOR]

The results of long-term studies are used to present, for the first time, the structural organization of zoobenthos communities and the dynamics of their density and biomass in rivers and brooks of the the Khektsir Ridge, including the boundaries of the Bol'shekhekhtsirskii Reserve, Khektsirskii Wildlife Reserve (the southern part of the Russian Far East). The benthic organisms were found to contain 23 groups (22 groups in the spring and summer, 19 groups in the autumn, and 8 groups in the winter). Leading in the occurrence frequency (>90%) were chironomids, mayflies, and oligochaetes. The chironomids and amphipods accounted for 37.0 and 19.1% of the total benthos density, and mollusks and amphipods, for 32.1 and 29.7% of the total biomass, respectively. Dominants in terms of density and biomass were amphipods; chironomids dominated in terms of density, and mollusks, in terms of biomass. The mean density of benthic organisms was 637 ± 21 spec./m2, and the mean biomass was 1.8 ± 0.2 g/m2. The benthic communities of rift segments in the rithral zone were found to be most productive. It is shown that the seasonal and long-term dynamics of zoobenthos communities is pronounced and can be traced in the group composition, structure, and quantitative characteristics. [ABSTRACT FROM AUTHOR]

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Fine-grained organic-rich sediments (FGORS) are accumulating in estuaries worldwide, with multi-faceted negative ecosystem impacts. A pilot experiment was carried out in a residential canal of the Indian River Lagoon estuary (IRL, Florida, USA) using an aeration treatment intended to mitigate the harmful ecological effects of organic-rich sediment pollution. Planktonic and benthic communities were monitored, and environmental data collected throughout the aeration process. Results were compared against control conditions to evaluate the efficacy of aeration in the mitigation of FGORS. During the aeration process, hurricane Irma impacted the study area, bringing heavy rainfall and spawning a brown tide event (Aureoumbra lagunensis). The overall thickness and volume of FGORS, and the organic content of surface sediments did not change during the aeration treatment. Dissolved oxygen was higher and ammonium concentrations were lower in aeration canal bottom water compared to the control canal. During treatment, aeration did facilitate benthic animal life when temperatures dropped below 25°C, likely due to water column mixing and the increased capacity of water to hold dissolved gasses. In general, aeration did not significantly change the planktonic community composition relative to the control canal, but, during the post-bloom period, aeration helped to weaken the brown tide and phytoplankton densities were 35–50% lower for A. lagunensis in aeration canal surface water compared to the control canal. Aeration has important management applications and may be useful for mitigating algal blooms in flow-restricted areas and promoting benthic communities in cooler environments. [ABSTRACT FROM AUTHOR]

Continental margins usually have a high degree of environmental heterogeneity, which, in turn, promotes high benthic biodiversity. The South-Southeast regions concentrate the most well-mapped areas of the Brazilian continental margin regarding seafloor geomorphology and physical oceanography. However, the structure of the soft-sediment benthic fauna of the continental slope is still unknown. Characterization and understanding of the Brazilian continental slope biota are imperative since human activities are increasing in the last decades, especially after the discovery of the pre-salt reservoir in Santos Basin. In this study, we aimed to establish a baseline of the spatial distribution of the benthic macrofaunal communities regarding their latitudinal and bathymetric patterns in the Santos Basin to support future environmental monitoring activities in the region. As part of the Santos Project - The Santos Basin Regional Environmental Characterization (PCR-BS) - coordinated by CENPES/PETROBRAS, a benthic oceanographic cruise was carried out in 2019. Sediment samples were collected using a GOMEX-type box corer in 47 stations distributed in eight transects (4002,400 m depth range). In total, 12 additional stations (1,300-2,200 m) were defined to cover an area where oil and gas are exploited. Our results showed that macrofaunal assemblages of the Santos Basin present strong depth zonation related to changes in organic matter input, as well as to temperature, carbonate, and grain size. At local scale, the northern sector stood out for having a higher abundance of macrofauna in the upper slope (400 m) and it probably reflects the oceanographic processes and the organic enrichment caused by the upwelling events that occur at Cabo Frio region. The zonation pattern and the dominance of some polychaete, peracarid crustacean, and bivalve families were similar to other SE Brazilian continental margins. [ABSTRACT FROM AUTHOR]

Cold seeps are characterized by typical endemic communities with associated microorganisms that depend on sulfide, methane, reduced nitrogenous compounds, and metals as electron donors for their survival through chemosynthesis. The discovery of an active cold seep site in January 2018 in the Krishna-Godavari (K-G) basin of Bay of Bengal was followed by a transit cruise in March 2018 to investigate the distribution and diversity of macrofauna. Further, the ambient sediment and pore water biochemistry were estimated to understand its relationship with macrofauna and the microbial associates of the sediment. Samples were collected at a water depth of around 1750 m at 3 stations: SP1, SP2, and SP3, using the box corer. The benthic fauna at the sites consisted mainly of Bivalvia, shrimps of Caridea family, Gastropoda species, Malacostraca species, Polychaeta, and few species of Echinoidea, Ophiuroidea, and Echiura. A total of 2313 macrofaunal individuals belonging to 8 classes, 18 families, and 20 species were identified from all the three stations. The communities were diverse at these sites with an average Shannon diversity index of 1.64 and are closely related to the lineages previously studied in ecologically similar environments. Most of the macrofauna were found to be filter feeders preferring a low organic carbon environment. Relict vesicomyid clams at the present study site suggest the succession from vesicomyids to the present composition of bivalve mussels and siboglinid worms. The microbial associates in the sediment significantly correlated with methane and hydrogen sulfide concentrations. The study suggests that the K-G basin cold seep serves as a conducive environment for the flourishing of benthic communities and therefore can support a rich biodiversity. [ABSTRACT FROM AUTHOR]

The Aviles Canyon System (Northern Atlantic coast of Spain) is one of the ten marine regions studied in the Spanish seas by the LIFE+ INDEMARES project, which aims to identify special areas of conservation within the Natura 2000 Network. This study aims to characterize the composition and distribution of the macrobenthic fauna in order to provide baseline data to obtain a basic knowledge of the environment. Three oceanographic surveys were carried out to investigate species and habitats of this deep-sea ecosystem. The stations were sampled using a box corer, in order to evaluate the distribution and biodiversity of the macroinfauna, and to analyse the granulometric composition and the organic matter content. Sediments were mainly sandy in nature, the finest sediments with the highest organic matter content were found in the deepest areas, while coarser sediments were located in shallow stations. Polychaetes were the best represented group in total number of species and individuals, followed by crustaceans and molluscs. Five major macrobenthic assemblages were determined through multivariate analyses. Bathymetry and sedimentary composition were the main factors structuring the benthic community separating shallow and coarser stations from deeper and finer ones. [ABSTRACT FROM AUTHOR]

The aim of the present study was to investigate the effect of dredging activities on the structure of the macrobenthic community of a port complex in São Luís do Maranhão (2°S, Brazil). Sampling was performed on four occasions: pre-dredging, dredging 1 (25% of the material dredged), dredging 2 (75% of the material dredged) and post-dredging. Total mean density was 430.8 ± 55.0 ind/m², with 147.76 ± 280.82 ind/m² at pre-dredging, 161.90 ± 285.67 ind/m² at dredging 1, 53.83 ± 72.15 ind/m² at dredging 2 and 67.29 ± 72.58 ind/m² after dredging, revealing a reduction during dredging 2. The most representative groups were Polychaeta, Oligochaeta, Crustacea and Mollusca. Lumbrineris sp. (Polychaeta) was present in all sampling periods and was the dominant species. Richness and Shannon diversity of the species were higher in the pre-dredging and post-dredging periods, with reductions during the dredging activities (dredging 1 and 2). Principal component analysis revealed a correlation with granulometry and heavy metals in the sediment. The dredging activities led to a reduction in the macrobenthic community. Moreover, post-dredging recovery was insufficient for the recovery of the community. [ABSTRACT FROM AUTHOR]

In Greece, the implementation of the Water Framework Directive for rivers is based mainly on benthic macroinvertebrates and uses a semi-quantitative method with a D-frame net, which is certified by the International Organization for Standardization. Before the official adoption of this method, a quantitative shovel sampler ("Cretan shovel") was used in southern Greece (Crete), which has been implemented for almost three decades due to the specific river habitats found in Crete (e.g., seasonal flow, narrow riverbeds, and coarse substrates). In this study, we compared community metrics, diversity indices, feeding groups, locomotion types, and ecological quality derived from data collected using timed semi-quantitative kick samples and quantitative shovel samples collected from the same sites simultaneously. In total, 20 samples from the north and south of Greece were collected. The majority of community metrics, diversity indices, and traits were comparable between samplers. However, there were statistically significant differences in the relative abundance of Ephemeroptera, Plecoptera, and Trichoptera, passive filterers' and the (semi) sessil groups, and Pielou's index. Most differences in the ecological quality between the kick and shovel samples were observed in 50% of the sites in northern Greece because the shovel is less effective at capturing motile zoobenthos. The ecological quality assessment in Crete by the Cretan shovel is comparable with the D-frame net in 75% of the samples. Thus, the Cretan shovel could efficiently sample the Cretan streams, which are characterized by coarse, narrow, turbulent, and hydrologically fluctuating river habitats. Such comparisons could improve sampling effectiveness and make additional data available to assess ecological quality. [ABSTRACT FROM AUTHOR]

The Ulleung Basin of the East Sea is a biological hotspot, but studies on the macrobenthos therein are lacking. To evaluate the macrobenthos species diversity and community structure in the Ulleung Basin, we conducted a survey from 2017 to 2021. A total of 262 species of macrobenthos was detected by the survey, and the average habitat density was 243 individuals/m2. The average biomass of macrobenthos was 43.7 g/m2, and the average Shannon and Wiener's diversity index was 2.3 (0.69–3.61). The dominant species were the polychaetes Terebellides horikoshii, Chaetozone setosa, Scalibregma inflatum, and Aglaophamus sp. and the bivalvia Axinopsida subquadrata. The community structure of macrobenthos differed according to water depth, and a correlation analysis using environmental variables showed that the community was affected by water temperature, salinity, and dissolved oxygen. The macrobenthic fauna in the Ulleung Basin was greatly influenced by water depth, the sedimentary environment was different, and the dominant species were also different. In addition, there was little seasonal change compared to the East Sea coast. Our findings will facilitate further investigation of benthic ecosystems throughout the East Sea. [ABSTRACT FROM AUTHOR]

This is a contribution in a series of taxonomic publications on benthic fauna of polymetallic nodule fields in the eastern abyssal Clarion-Clipperton Zone (CCZ). The material was collected during environmental surveys targeting exploration contract areas 'UK-1', 'OMS' and 'NORI-D', as well as an Area of Particular Environmental Interest, 'APEI-6'. The annelid families Amphinomidae and Euphrosinidae are investigated here. Taxonomic data are presented for six species from 41 CCZ-collected specimens as identified by a combination of morphological and genetic approaches; of the six species, three are here described as new, one species is likely to be new but in too poor condition to be formalised and the two others likely belong to known species. Description of three new species Euphrosinella georgievae sp. nov., Euphrosinopsis ahearni sp. nov., and Euphrosinopsis halli sp. nov. increases the number of formally described new annelid species from the targeted areas to 21 and CCZ-wide to 52. Molecular data suggest that four of the species reported here are known from CCZ only, but within CCZ they have a wide distribution. In contrast, the species identified as Bathychloeia cf. sibogae Horst, 1910 was found to have a wide distribution within the Pacific based on both morphological and molecular data, using comparative material from the abyssal South Pacific. Bathychloeia cf. balloniformis Böggemann, 2009 was found to be restricted to APEI-6 based on DNA data available from CCZ specimens only, but morphological data from other locations suggest potentially a wide abyssal distribution. The genus Euphrosinopsis was previously known only from Antarctic waters, and Euphrosinella georgievae sp. nov. was recovered as a sister taxon to the Antarctic specimens of Euphrosinella cf. cirratoformis in our molecular phylogenetic analysis, strengthening the hypothesised link between the deep-sea and Antarctic benthic fauna. [ABSTRACT FROM AUTHOR]

Antarctica is a remote place, the continent is covered by ice and its surrounding coastal areas are frozen for the majority of the year. Due to its peculiarity the observation of the underwater organisms is particularly difficult, complicated by logistic factors. We present a long-term dataset consisting of 755 images acquired by using a non-invasive, autonomous imaging device and encompassing both the Antarctic daylight and dark periods, including the corresponding transition phases. All images have the same field of view showing the benthic fauna and part of the water column above, including fishes present in the monitored period. All the images are manually annotated after a visual inspection performed by expert biologists. The extended monitoring period and the annotated images make the dataset a valuable benchmark suitable for studying the dynamics of the long-term Antarctic underwater fauna as well as for developing and testing algorithms for automated image analysis focused on the recognition and classification of the Antarctic organisms and the automated analysis of their long-term dynamics. Measurement(s) Coastal Benthic Megafauna Technology Type(s) Autonomous Imaging Device Factor Type(s) None Sample Characteristic - Organism Sterechinus neumayeri • Odontaster • Trematomus • Polynoidae • Diplasterias • Ophiuridae • Ammothea • Neobuccinum eatoni • Staurocucumis • Flabegraviera mundata Sample Characteristic - Environment coastal sea water Sample Characteristic - Location East Antarctica [ABSTRACT FROM AUTHOR]

The Cambrian Series 2–Miaolingian transition is a pivotal period during Earth history, which witnessed the decline of biodiversity and the reduction in biomass, i.e., the redlichiid–olenellid trilobite extinction. The notable δ13C excursion (RECE) near the Cambrian Series 2–Miaolingian boundary in east Gondwana and China apparently corresponds with the redlichiid trilobite extinction. To better understand the causal mechanism of this biotic crisis, we report the carbon isotope stratigraphy and facies changes from Cambrian Series 2–Miaolingian transition of the Mantou Formation on the southern North China Craton. The carbon isotope excursions at the Cambrian Series 2–Miaolingian transition in the study area are 0.7‰ in the Chishanhe section and −0.2‰ in the Luoquan section, respectively, showing a weak negative excursion or even no negative excursion. The sedimentary environments in the study area gradually changed through time from a clastic tidal flat to a carbonate platform across the transition, which indicated a gradual rise in sea level, with anoxic conditions occurring predominantly before the RECE δ13C excursion. Microbially induced sedimentary structures and oncoids occurred widely at the top of Cambrian Series 2. Abundant metazoan trace fossils were preserved in the Miaolingian Series of the study area. The evolution of biogenic structures across the Cambrian Series 2–Miaolingian transition indicates the emergence of harsh environments associated with the proliferation of MISS and oncoids at the RECE horizon and the recovery of benthic metazoan fauna after the RECE biotic crisis. [ABSTRACT FROM AUTHOR]

The purpose of this study was to assess the north coasts of the Egyptian Red Sea, including Ras Gharieb, Hurghada, Safaga and Qusier, by evaluating the heavy metal pollution in seawater and benthic flora and fauna in the winter and summer of 2016. The concentrations of heavy metals (Fe, Mn, Zn, Cu, Ni, Cd and Pb) were analysed with an atomic absorption spectrophotometer. The results revealed that the Fe levels in the seawater ranged from 7.86 and 27.95 μg l−1, while the Zn concentrations fell between 1.83 and 5.63 μg l−1. In contrast, the recorded values of Mn, Cu, Ni, Pb and Cd in the seawater were minimal at the study sites. Regarding the biota samples, Porifera species were more adaptable than others to an accumulation of most metals in their tissues. Furthermore, seaweeds and seagrasses demonstrated remarkable adaptation in highly polluted regions, especially those with high turbidity, landfilling, sedimentation and high eutrophication rates – much more than the benthic fauna. Our research highlights the critical need for strict regulation of metal emissions in these coastal regions. [ABSTRACT FROM AUTHOR]

The ecological effects of seabed‐penetrating fishing gears depend, in part, on the seabed penetration (P) of the gear. We present a gear impact tool that utilizes published data to provide estimated P of globally utilized seabed‐penetrating fishing gears in different sediments and their resulting impact on biological communities. As P correlates with the depletion (d) of benthic fauna caused by fishing gears, we use P to calculate d, which can be used to estimate the relative benthic status (RBS; the community biomass of benthic fauna relative to carrying capacity) of the seabed. The tool can provide an objective appraisal of different fisheries management scenarios or interventions (e.g., gear modification, gear substitution, or fishing effort limits) on seabed status, particularly in situations of limited data or resources. For otter trawling in mud, gear modification may provide greater ecological benefits than reducing fishing effort; mean RBS increased by 29% in fished areas by removing the impact from the otter trawl sweeps; this is comparable to reducing fishing effort by approximately 70%. In contrast, modification of beam trawl gear in sand resulted in marginal improvements (6%) in RBS. Modification or removal of gear components with high seabed penetration could result in greater improvements in RBS than spatial management, dependent on gear type and sediment. We provide a quantitative method for estimating the effectiveness of different management scenarios in reducing the benthic impact of seabed‐penetrating fishing gears, enabling an objective evaluation of the trade‐off between spatial management measures (closures or effort reductions) versus technical modifications. This article met the requirements for a Gold‐Gold JIE data openness badge described at http://jie.click/badges [ABSTRACT FROM AUTHOR]

Benthic macroinvertebrates are widely used to assess the ecological quality of fresh waters. This is because they are in direct contact with the aquatic environment and respond differently to pollutants and changes in the watershed, which are difficult to assess by toxicological or chemical monitoring alone. This study used benthic macroinvertebrate parameters to assess the quality of the nearshore waters of lake Kivu. Twenty‐six metrics covering various aspects of the community were tested using whisker plots to compare their sensitivity in discriminating between reference and disturbed stations. Nine parameters (% EPT taxa, % Diptera taxa, % Chironomid taxa, % Insect taxa; % no Insects taxa, ratio EPT/Chironomid taxa, % moderate tolerant taxa, % very moderate tolerant taxa, Family Biotic Index) were found to be sensitive and were able to discriminate between reference and disturbed stations. All sensitive metrics, with the exception of the percentage of EPT taxa, were positively and/or negatively correlated with the physico‐chemical parameters affected by the changes in the littoral zone. The combined values of the three calculated biotic indices (ASPT, BMWP, and FBI) showed that the biological water quality varies from moderate to good in the reference stations and from average to poor in the disturbed stations. It is concluded that metrics based on benthic macroinvertebrates are effective for assessing water quality in the littoral zone of Lake Kivu in the context of the lack of historical water quality databases and specific tools for toxicological assessment. It is suggested to compare the performance of this approach with others currently used in bio‐indication. [ABSTRACT FROM AUTHOR]

The high latitude scleractinian coral Alveopora japonica Eguchi, 1965 occurs in high density in the shallow rocky subtidal in Jeju Island, forming coral carpets. Despite its ecological role providing a unique habitat for other benthic organisms, the benthic fauna associated with the A. japonica coral carpet is poorly known. To identify fauna associated with the coral carpet, we explored three sites dominated by A. japonica and one control site on northwestern Jeju Island in May 2013. Using SCUBA, we collected A. japonica and the epibenthic mega-fauna associated with the colonies in 1×1 m2 and identified them to the species level. At a depth of 10 to 15 m, A. japonica colonies heavily covered the seafloor, forming a layer called a coral carpet, with a density of 94 (Keumneung-ri), 133 (Biyangdo), and 155 (Gwidok-ri) colonies/m2. Thirty-four molluscan species were identified from the four sites, including 20 bivalves and 14 gastropods. The coral carpets were enriched with sessile bivalves compared to the control site, as we identified twenty bivalve and eight gastropod species from the coral carpets. Most bivalve species associated with the coral carpets had tropical-subtropical affinities, while gastropods were mainly subtropical and subtropical-low boreal species. Leiosolenus lischkei M. Huber, 2010, in the family Mytilidae and Barbatia steamsi (Pilsbry, 1895), in the family Arcidae, were the two most abundant bivalve species in the coral carpet, L. lischkei being a borer, and B. stearnsi a nestler. The tropical to subtropical Pacific star shell Astralium haematragum (Menke, 1829)was the most abundant gastropod at the study sites. The bivalves and gastropods associated with the coral carpet were small-sized juveniles or sub-adults, suggesting that the coral carpet provides a micro-habitat for the bivalves and gastropods. [ABSTRACT FROM AUTHOR]

The Hiraiso Formation of northeast Japan represents an important and under-explored archive of Early Triassic marine ecosystems. Here, we present a palaeoecological analysis of its benthic faunas in order to explore the temporal and spatial variations of diversity, ecological structure and taxonomic composition. In addition, we utilise redox proxies to make inferences about the redox state of the depositional environments. We then use this data to explore the pace of recovery in the Early Triassic, and the habitable zone hypothesis, where wave aerated marine environments are thought to represent an oxygenated refuge. The age of the Hiraiso Formation is equivocal due to the lack of key biostratigraphical index fossils, but new ammonoid finds in this study support an early Spathian age. The ichnofossils from the Hiraiso Formation show an onshore-offshore trend with high diversity and relatively large faunas in offshore transition settings and a low diversity of small ichnofossils in basinal settings. The body fossils do not, however, record either spatial or temporal changes, because the shell beds represent allochthonous assemblages due to wave reworking. The dominance of small burrow sizes, presence of key taxa including Thalassinoides, Rhizocorallium and Holocrinus, presence of complex trace fossils, and both erect and deep infaunal tiering organisms suggests that the benthic fauna represents an advanced stage of ecological recovery for the Early Triassic, but not full recovery. The ecological state suggests a similar level of ecological complexity to late Griesbachian and Spathian communities elsewhere, with the Spathian marking a globally important stage of recovery following the mass extinction. The onshore-offshore distribution of the benthic faunas supports the habitable zone hypothesis. This gradient is, however, also consistent with onshore-offshore ecological gradients known to be controlled by oxygen gradients in modern tropical and subtropical settings. This suggests that the habitable zone is not an oxygenated refuge that is only restricted to anoxic events. The lack of observed full recovery is likely a consequence of a persistent oxygen-limitation (dysoxic conditions), hot Early Triassic temperatures and the lack of a steep temperature/water-depth gradient within the habitable zone. [ABSTRACT FROM AUTHOR]

Benthic fluxes of oxygen and carbon in coastal zones are poorly resolved in mechanistic models due to the lack of understanding of the diverse interactions among the physical, chemical, and biological drivers of biogeochemical fluxes. To inform modelling efforts we used ex-situ incubation experiments to identify spatial and seasonal patterns of oxygen and dissolved inorganic and organic carbon (DIC and DOC) fluxes in the coastal southern Baltic Sea. We used boosted regression trees to identify important drivers of the studied fluxes. Our results demonstrate that benthic communities, in addition to sediment parameters, played a dominant role in shaping oxygen and DIC fluxes, while neither benthic community, environment, season, nor sampling location could account for the highly variable DOC fluxes. DIC fluxes were partly decoupled from oxygen fluxes, since carbonate dissolution, anaerobic respiration, and submarine groundwater discharge affected DIC fluxes in the study region. Boosted regression trees proved to be a useful tool to study drivers of biogeochemical fluxes as it allowed to identify non-linear effects of biological and environmental variables on benthic fluxes. [ABSTRACT FROM AUTHOR]

Recently, microplastics (MPs) have attracted extensive attention to their wide distribution and potential toxicity in ecosystems. However, there was a lack of research focused on MPs in seaweed bed ecosystems. This study investigated the distribution and toxicity of MPs in macrobenthos in Sargassum ecosystem. According to the in-situ investigation results, the abundance of MPs in the sediment was 0.9–2.3 items/g, the indoor microcosmic experiment was constructed. After exposure to MPs (0, 2, and 20 items/g) for 30 days, the abundance of MPs in macrobenthos exhibits a concentration-dependent increase. However, there was no significant bioaccumulation of MPs at the trophic level. The indoor toxicity test revealed that MPs induced oxidative stress and altered intestinal microflora composition in macrobenthos, even at actual environmental concentrations (2 items/g). It may result in a perturbation of the organism's homeostatic equilibrium. High-concentration (20 items/g) MPs had a greater impact on alkaline phosphatase (AKP) in Mollusks. The increase in AKP activity could be indicative of an adaptive mechanism in some macrobenthos while the decline in AKP activity might signal a decrease in their survival. These results elucidated the fate of MPs in ecosystem and the ecological risks of MPs to large benthic animals on model environmental conditions. • The distribution of MPs in the Sargassum ecosystem was investigated in situ. • Biomagnification of MPs was studied in situ investigation concentration. • Toxicity of MPs to macrobenthos was studied in situ investigation concentration. [ABSTRACT FROM AUTHOR]

[Display omitted] • Effects of the creation of land-water transitions on macroinvertebrates were tested. • Effects of new land-water transitions were mediated by hydrological connectivity. • Benthic fauna biomass was significantly higher in sites disconnected from open water. • Emergent insect biomass was significantly higher in disconnected sites. Land-water transition areas play an important role in the functioning of both aquatic and terrestrial ecosystems. Enhancing habitat complexity and heterogeneity by restoring or adding land–water transition areas to degraded aquatic ecosystems can be effective management to stimulate productivity by lower trophic levels – and hence increase food availability for biota of conservation interest, including fish and birds. Here, we studied whether hydrological connectivity can be used as an environmental indicator (connected or disconnected) for the development trajectories of newly constructed land–water transition areas in shallow lakes. We capitalized on a large-scale restoration project called "Marker Wadden", which created new land–water transition areas with and without hydrological connectivity in a degraded shallow lake in the Netherlands (Lake Markermeer). We compared how the new areas with and without hydrological connectivity developed with respect to abiotic parameters and biomasses of benthic, pelagic, and emergent macroinvertebrates. In sites disconnected from the open water, water depths became significantly lower than in hydrologically connected sites during summer, likely due to evaporation. In these shallower waters, daytime temperatures and organic matter content of the sediment were higher, while dissolved oxygen concentrations remained sufficient. Therefore, biomasses of benthic macroinvertebrates and emergent insects became higher in the disconnected sites. These lower trophic levels could provide higher food availability for benthivorous and insectivorous birds, while remaining inaccessible to fish. This puts forward that hydrological connectivity (connected or disconnected) can be used as an environmental indicator for aquatic food web development trajectories, and that it regulates relative food availability for fish and birds. Restoring land–water transition areas without hydrological connectivity provides higher biomasses of lower trophic levels, which are only accessible to birds. Restoring areas with hydrological connectivity results in relatively lower biomasses of invertebrates, but these provide food to birds feeding on invertebrates, and fish and fish-eating birds. Creating areas including both types of land–water transition zones, connected and disconnected to open water can benefit fish and birds of both feeding guilds. [ABSTRACT FROM AUTHOR]

The advent of bioturbation in the early Paleozoic and the subsequent intensification of sediment mixing by benthic animals dramatically altered marine ecosystems and biogeochemical cycling. However, the timing and pace of the transition to ubiquitous well-bioturbated sediments in the uppermost seafloor remain under debate. Skolithos 'piperock', a classic Cambrian ichnofabric composed of densely packed vertical burrows, has often been invoked as evidence for an early ramping up of infaunalization and intense sediment disruption, but its biogeochemical impact has not been quantitatively explored in this context. Here, we relate high-resolution sedimentological and bioturbation data from 182 m of the Zabriskie Quartzite of the Death Valley region of California—a locality known for hosting piperock—to a new numerical three-dimensional diagenetic model to investigate the effect of Skolithos on sediment oxygen penetration and organic carbon remineralization. Our modeling indicates that increasing Skolithos burrow density substantially expands the local oxic zone and, in contrast with other modes of bioturbation, can also result in decreased sulfur oxidation. However, our field data indicate true 'piperock' is relatively scarce in the Zabriskie Quartzite, even among horizons that are of identical lithology to those containing piperock and that house individual Skolithos burrows. This suggests that, in the Zabriskie and potentially other Cambrian piperock-bearing units, the broader impact of piperock on seafloor ecology, chemistry, and sediment properties may have been restricted in scope. • Bioturbation field data (ii, BPBI) is used to ground diagenetic modeling. • Field data show piperock is rare even in a classic 'piperock' unit. • A new 3D numerical diagenetic model is used to quantify the effect of bioturbation. • Skolithos burrows increase sediment oxygenation but decrease sulfur oxidation. [ABSTRACT FROM AUTHOR]

Even though hydrodynamic conditions play an important role in shallow costal ecosystems such as enhancing primary production by the remobilization of nutrients, they could represent a potential threat to motile benthic animals because they can dislodge them and restrict their movements, thereby impacting their distribution within the ecosystem. Seagrass canopies are critical habitats that shelter many organisms against predators and adverse hydrodynamic conditions, however, they have been declining over time, resulting in seagrass fragmentation and low canopy densities. The shrimp Palaemon adspersus is an epifaunal species that thrives in Zostera marina seagrass, and therefore can offer insight into the impact canopy fragmentation is having on its behavioral patterns. In a laboratory flume with unidirectional flow, P. adspersus individuals were exposed to flow velocities in sand bottoms covered with Z. marina canopies, and their distribution studied as a function of both the canopy density and the current velocity. Flow velocities above 3 cm s−1 started to dislodge P. adspersus individuals, thereby reducing their tolerance to the flow. However, under flow velocities ranging from 3 cm s−1 to 21 cm s−1, they preferred to shelter within the seagrass canopies with intermediate densities higher than 150 shoots m−2, compared to bare sand. The patch density at which individuals found patch sheltering decreased linearly as the current velocity increased, indicating that individuals were unable to withstand the velocity of the flow. For current velocities above 21 cm s−1, P. adspersus were unable to tolerate the flow velocity, and so were dislodged from the canopy. This study highlights the importance of protecting eelgrass, as the ever-decreasing meadows are making P. adspersus even more vulnerable to the high flow rates. [Display omitted] • Hydrodynamic conditions can impact the horizontal distribution of motile benthic animals. • For velocities above 21 cm s−1, P. adspersus could not withstand the velocity of the flow. • P. adspersus sheltered within seagrass canopies under flow velocities ranging from 3 cm s−1 to 21 cm s−1. • Protecting seagrass meadows is crucial, as their decline makes P. adspersus more vulnerable to the high flow rates. [ABSTRACT FROM AUTHOR]

Oceanic anoxia is regarded as the immediate cause of the Late Devonian Frasnian–Famennian (F–F) bio-crisis and Annulata bio-event. The oceanic anoxia has been linked to continental weathering and input. However, some previous findings indicate oxic marine environments during the F–F bio-crisis. Moreover, the relative impact of terrestrial input on the Late Devonian oceanic redox conditions, when comparing a bio-crisis and a bio-event, remains unknown. Here, we present a decoupled oceanic redox model suggesting the redox conditions were different between shallow and deep water columns during the F–F bio-crisis, i.e., intensified euxinia in the photic zone and a more oxygenated condition at the seafloor. Geochemical (biomarker and trace metal) and sedimentologic evidence from the Late Devonian Seaway, eastern U.S., indicate that the shallow-deep decoupled oceanic redox conditions were regulated by terrestrial weathering and input. During the F–F bio-crisis, land nutrient input intensified photic zone euxinia through eutrophication, while hyperpycnal flows oxygenated seafloors. After the F–F bio-crisis, the seafloor redox conditions shifted from oxygenation to silled euxinia, and the watermass became hydrographically restricted. During this post-F–F interval, the euxinia at the seafloor intensified due to land nutrient runoff during the Annulata bio-event. Importantly, the land weathering and input during the F–F bio-crisis were more prominent than during the Annulata bio-event. This resulted in widespread and intense photic zone euxinia during the F–F bio-crisis, relative to the seafloor euxinia that developed in restricted areas during the Annulata bio-event. Our decoupled oceanic redox model may explain the preferential decimation of shallow-water organisms during the F–F bio-crisis. The seafloor euxinia during the Annulata bio-event may provide a niche for the turnover of benthic faunas adapting to low oxygen levels. This study suggests that continental weathering and influxes played an important role in regulating oceanic oxygen evolution and impacting life evolution and bio-diversity. • PZE intensified but seafloor became more oxygenated in the Late Devonian Seaway during the F–F bio-crisis. • Seafloor oxygenation may be caused by hyperpycnal flows. • Land input caused redox changes during the F–F bio-crisis and Annulata bio-event. • Seafloor shifted from oxygenation to silled euxinia after the F–F bio-crisis. • The redox model may explain the preferential decimation of shallow-water organisms in the Late Devonian Seaway during the F–F bio-crisis. [ABSTRACT FROM AUTHOR]

Along the northern Mid-Atlantic Ridge (nMAR), in habitats under moderate (<10 °C) hydrothermal influence on the Snake Pit vent field (SP), large assemblages dominated by Bathymodiolin mussels remain poorly characterised, contrary to those in warmer habitats dominated by gastropods and alvinocaridid shrimps that were recently described. In this study, we assessed and compared the population structure, biomass, diversity and trophic interactions of two Bathymodiolus puteoserpentis assemblages and their associated fauna at SP. Three sampling units distanced by 30 cm were sampled in 2014 during the BICOSE cruise at the top of the Moose site (''Elan'' site), while few meters further down three others, distanced by ∼1 m were obtained in 2018 during the BICOSE 2 cruise at the edifice's base. We observed a micro-scale heterogeneity between these six sampling units partially explained by temperature variations, proximity to hydrothermal fluids and position on the edifice. Meiofauna dominate or co-dominate most of the sampling units, with higher densities at the base of the edifice. In terms of macrofauna, high abundance of Pseudorimula midatlantica gastropods was observed at the top of the vent edifice, while numerous Ophioctenella acies ophiuroids were found at the base. Contrary to what was expected, the apparent health and abundance of mussels seems to indicate a current climax stage of the community. However, the modification of B. puteoserpentis isotopic signatures, low number of juveniles decreasing over the two years and observations made during several French cruises in the study area raise questions about the fate of the B. puteoserpentis population over time, which remains to be verified in a future sampling campaign. • Assemblage heterogeneity at different scales linked to fluid proximity & location. • Meiofaunal groups dominated. Macrofaunal disparity between top and base of edifice. • Low number of mussel juveniles over time questions the future of the population. [ABSTRACT FROM AUTHOR]

The preliminary consequence of pollutants in water is to reduce the quality of water although this may not be immediately noticeable because of the selfpurifying ability of some water bodies. The study on the physicochemical characteristics, bacteriological, and macrobenthic invertebrates was carried out in the Orogodo River. All the examined physicochemical characteristics of the water showed no significant difference (p > 0.05) across the stations. For the heavy metals, it was in decreasing order as follows: station 2 > station 3 > station 1. All the heavy metals except nickel had high values upstream (station 1). Bacteriological examination of the water revealed the presence of mesophilic bacteria across the stations at p < 0.01 (a highly significant difference). E. coli varied significantly (p < 0.01) across the stations. However, a further evaluation using the DMR test revealed that the population recorded at station 3 was significantly higher than that recorded at stations 1 and 2. A total of 787 macrobenthic invertebrates comprising 44 macroinvertebrates' taxa were recorded. Most of the macrobenthic faunas observed were distributed across the three stations except the chironomids, the rat-tailed maggot (Eristalis tenax), and the family Hirudinea whose occurrence was almost restricted to station 2. This revealed an ecological impact because this species is a basic indicator of an ecosystem sentinel. Sorenson's quotient of faunal similarity showed that macrobenthic fauna at these three stations was similar. The similarity was the highest between stations 1 and 3 (75.0%) and the lowest between stations 1 and 2 (50.0%). The biological monitoring working party (BMWP) score system showed that station 2 was moderately polluted, while stations 1 and 3 were only slightly affected. At stations 1, 2, and 3, the arithmetic WQI (water quality) values were 900.99, 1010.10, and 951.20, respectively. The high values of WQI obtained across the stations were attributable to the concentrations of Fe, Cu, Cr, Cd, Ni, Pb, V, and THC, thus reiterating the conclusion drawn from the physicochemical parameter analysis. Boiling the water before consumption is highly recommended to avoid possible human health problems, especially effects from microbial pathogens like coliforms and E. coli. [ABSTRACT FROM AUTHOR]

A partial skeleton of a blue or fin whale, estimated to have been 16.5 m in length and thought to have been lying on the seafloor for <10 years, was observed at a depth of 1288 m off western Vancouver Island, British Columbia, Canada (48.68°N, 126.84°W). Four push cores were taken at the site, three (15-26 cm in length) directly under caudal vertebrae and one 18 cm long, considered a reference, 15 m away, in order to characterize changes in the benthic foraminiferal assemblage due to the whale-fall. A Q-mode cluster analysis identified four groupings, separating the surface and deeper samples of both the whale-fall and reference cores. The results of a metric multi-dimensional scaling plot and permutational multivariate analysis of variance test of the surface samples also suggest there was a significant difference between the whale-fall and reference core benthic foraminiferal faunas. No endemic species were recovered. Downcore samples below 6 cm in the whale-fall and reference cores were characterized by common Uvigerina peregrina, Pseudoparrella pacifica, Bolivina spissa, Bulimina striata, and Takayanagia delicata. In contrast, Cassidulinoides parkeriana, which typically is a minor component of benthic foraminiferal assemblages, dominated the upper 6 cm of the whale-fall cores, whereas the low oxygen-tolerant species T. delicata dominated the same interval in the reference core. The dramatic increase in abundance of C. parkeriana in the upper sediments below this whale-fall, as well as at the Torishima Seamount whale-fall site off Japan, indicate that it is an opportunistic species well adapted to taking advantage of unpredictable and highly localized tropic windfalls such as whale-falls. To our knowledge, this is the first benthic foraminiferal species shown to increase dramatically in abundance in the presence of awhale-fall. Additionally,modern fragments of whale bones occurring as deep as 12 to 15 cm downcore at the western Vancouver Island site demonstrate the effect of bioturbation by invertebrate scavengers that consumewhale carcasses, indicating that detailed biostratigraphic records below whale-falls should be interpreted with caution. [ABSTRACT FROM AUTHOR]

Environmental change and growing anthropogenic pressure on water resources is increasing the duration and intensity of drying events in streams in many geographical locations. Favourable sediment characteristics (e.g. high porosity and low fine sediment load within the substrate matrix) may facilitate benthic macroinvertebrate use of subsurface sediments in response to drying. However, the influence of sedimentary characteristics on the use and subsequent recovery of macroinvertebrates from initial vertical migration into, survival during unfavourable conditions within, and subsequent re‐emergence from subsurface sediments have not been directly observed.Transparent mesocosm tanks were used to directly observe the vertical movement and subsequent re‐emergence of Gammarus pulex from subsurface sediments in response to increasing dry period (1, 7, or 21 days) and fine sediment load (0.5–1 mm particle diameter used for light and heavy sediment treatment) and following rehydration and resumption of flowing conditions.Increasing volumes of fine sediment addition limited the ability of G. pulex to access subsurface sediment in response to drying and re‐emerge following rehydration. The longest dry period (21 days) reduced the ability of G. pulex to re‐emerge from the subsurface sediments following rehydration and flow resumption.Increasing fine sediment load negatively affects taxa using subsurface sediments as a refuge. Increased fine sediment deposition has the potential to reduce both access to the sub‐surface and re‐emergence once surface flow resumes.As many rivers are beginning to dry out, or are showing prolonged drying due to global warming, it is increasingly important that river management reduces the input of fine sediment into rivers and increase sediment porosity of riverbeds to facilitate access into the subsurface refuge by benthic fauna. [ABSTRACT FROM AUTHOR]

Human activities in riverine water bodies can cause loading of nutrients and other pollutants in receiving systems, affecting species interactions and population dynamics. The present study aimed to investigate the influence of anthropogenic alteration on an artificial water body, i.e., the Shahid Rajaee reservoir, in Iran that is experiencing a serious water crisis. The reservoir is subject to high anthropogenic nutrient loads from the Shirinroud and Sefidroud rivers, the effect of which needs to be evaluated considering the strategic importance of the reservoir as a source of drinking water. A field sampling campaign was carried out at seven stations (one in each of the two river mouths and five in the reservoir itself) each month from April to July 2016. The study entailed sampling of benthic macroinvertebrate fauna at the river mouths and plankton communities at the reservoir stations. In addition to macroinvertebrate and plankton, abiotic and nutrient variables were measured at all stations. Substantial loading of organic matter, mainly from the Shirinroud River, was detected throughout the sampling period, with a detrimental effect on both benthic and plankton communities. The decline in plankton diversity was particularly noticeable at stations close to the river mouths during June and July, with a bloom of Dinoflagellata and Cyanobacteria and strong dominance of larger zooplankton taxa, e.g., Copepoda. Our results suggest that river water quality, affected by human activities, alters the planktonic communities in Rajaee reservoir. Our assessment indicates that measures on both the Shirinroud River and the reservoir are required to mitigate and prevent even stronger eutrophication of the reservoir ecosystem. [ABSTRACT FROM AUTHOR]

For decades, we monitored numbers and weights of the macrozoobenthos in a vast tidal‐flat area in the Dutch Wadden Sea. We used data collected since 1992 to estimate annual secondary production. Data on chlorophyll concentrations and primary production were available for a nearby tidal inlet, showing rapid increases in the late 1970s and gradual declines since the late 1980s. The benthos responded with a doubling of biomass around 1980 and gradual declines of summer biomass, annual production as well as seasonal biomass gain for the 1992–2019 de‐eutrophication period. In nearly all years, production of bivalves (on average 25.5 gAFDM m−2 yr−1) accounted for more than half of the total zoobenthic production (averaging 42.7 gAFDM m−2 yr−1). Production values for individual years were not correlated with chlorophyll concentrations or primary production of that year, but did show a significantly positive relationship with bivalve recruitment success in the preceding year. As recruitment was governed by predation pressure on early bivalve bottom stages, it is a top‐down process. Bottom‐up processes were expressed in the gradually declining long‐term trend of bivalve growth rates and secondary production during the de‐eutrophication period and also in a few years when bivalve numbers were so high that growth rates were reduced by food competition. In by far most years, numbers of bottom animals were too low to fully exploit the carrying capacity of the system and production increased linearly with preceding recruitment. [ABSTRACT FROM AUTHOR]

In coastal systems, planktonic and benthic silicifiers compete for the pool of dissolved silicon, a nutrient required to make their skeletons. The contribution of planktonic diatoms to the silicon cycle in coastal systems is often well characterized, while that of benthic silicifiers such as sponges has rarely been quantified. Herein, silicon fluxes and stocks are quantified for the sponge fauna in the benthic communities of the Bay of Brest (France). A total of 45 siliceous sponge species living in the Bay account for a silicon standing stock of 1215 tons, while that of diatoms is only 27 tons. The silicon reservoir accumulated as sponge skeletons in the surface sediments of the Bay rises to 1775 tons, while that of diatom skeletons is only 248 tons. These comparatively large stocks of sponge silicon were estimated to cycle two orders of magnitude slower than the diatom stocks. Sponge silicon stocks need years to decades to be renewed, while diatom turnover lasts only days. Although the sponge monitoring over the last 6 yr indicates no major changes of the sponge stocks, our results do not allow us to conclude if the silicon sponge budget of the Bay is at steady state, and potential scenarios are discussed. The findings buttress the idea that sponges and diatoms play contrasting roles in the marine silicon cycle. The budgets of these two major silicon users need to be integrated and their connections revealed, if we aim to improve our understanding of the silicon cycling in coastal ecosystems. [ABSTRACT FROM AUTHOR]

Developments in animal electronic tagging and tracking have transformed the field of movement ecology, but interest is also growing in the contributions of tagged animals to oceanography. Animal-borne sensors can address data gaps, improve ocean model skill and support model validation, but previous studies in this area have focused almost exclusively on satellite-telemetered seabirds and seals. Here, for the first time, we develop the use of benthic species as animal oceanographers by combining archival (depth and temperature) data from animal-borne tags, passive acoustic telemetry and citizen-science mark-recapture records from 2016–17 for the Critically Endangered flapper skate (Dipturus intermedius) in Scotland. By comparing temperature observations to predictions from the West Scotland Coastal Ocean Modelling System, we quantify model skill and empirically validate an independent model update. The results from bottom-temperature and temperature-depth profile validation (5,324 observations) fill a key data gap in Scotland. For predictions in 2016, we identified a consistent warm bias (mean = 0.53 °C) but a subsequent model update reduced bias by an estimated 109% and improved model skill. This study uniquely demonstrates the use of benthic animal-borne sensors and citizen-science data for ocean model validation, broadening the range of animal oceanographers in aquatic environments. [ABSTRACT FROM AUTHOR]

Marine urbanization promotes the addition of hard substrata that barely resembles natural substrate nearby. We manipulated habitat topography in five marinas across one of the most populated regions from the Southwestern Atlantic Ocean to describe the effect of habitat complexity on the diversity of benthic communities across sites with distinct conditions and biotas. The highest biomass was found in the two marinas under high pollution and freshwater disturbances, regardless of habitat complexity. Habitat topography did not affect species richness but determined the structure of sessile communities in all marinas. The structure of mobile communities was affected only in the most diverse site, increasing the abundance of isopods. In general, fragile ascidians, hydrozoans, and non‐calcified polychaetes dominated complex habitats, while structurally defended animals such as barnacles, serpulids, and encrusting bryozoans dominated simple habitats, suggesting that dominant species are selected by habitat complexity based on their morphological traits. However, the final community structure was also determined by differences across marinas, suggesting that the effect of increasing habitat topography is mostly site‐specific. Therefore, strategies to minimize the disparity between natural and artificial habitats must consider historic local community and a multiple stressors scenario. [ABSTRACT FROM AUTHOR]

The article describes the features and results of using the autonomous underwater vehicle (AUV) MMT-3000 for research of Antarctic ecosystems and deep-sea biological resources of the South Seas. The methodology for working with an AUV in the extreme conditions of Antarctica and the technical solutions used to visually assess the distribution of bottom animals are discussed. The results of processing the data obtained by AUV during deep-sea missions in the Atlantic sector of the Antarctic during the expedition of the RV Akademik Mstislav Keldysh (cruise 79) in 2020 are presented. At the same time, the data of image analysis and trawl catch were compared. Based on the experience gained, the requirements to be implemented in the new AUV MMT-3500, which is designed and manufactured to effectively carry out deep-sea research in subsequent expeditions in the Southern Ocean, are determined. [ABSTRACT FROM AUTHOR]

A survey of the macrozoobenthos communities in the Maritsa River (South Bulgaria) was carried out in the summer of 2021. Benthic samples were collected and physicochemical parameters (water temperature, pH, conductivity, dissolved oxygen and nutrients) were measured at 15 sites located on the main river and its tributary system. The studied sites belonged to different river types and characterised the diversity of the ecological conditions—from unaffected to anthropogenically influenced river stretches. In addition, data from a study conducted in the summer of 2020 were used to analyse species–factor interactions in the river ecosystems and to assess the bio-indicative potential of the aquatic invertebrates. The dynamics of the taxonomic composition and abundance of the macrozoobenthos were analysed in relation to environmental factors. The physicochemical conditions of the water environment changed during the period of high water, which led to a reduction in the composition of the macrozoobenthos. Plecoptera and Trichoptera decreased in richness and abundance downstream and under human impacts. Ephemeroptera and Chironomidae were permanently present along the whole river. Oligochaeta increased in the lower river reaches and at sites with a greater amount of organic matter. The ecological status determined by the macrozoobenthos varied from high (site 1) to good, moderate and bad (site 13) at the studied sites. [ABSTRACT FROM AUTHOR]

Despite the high number of fish species described for the Amazon region, the ichthyofauna that inhabits the depths of the main channels of large tropical rivers is one of the least known. In order to know the diversity patterns of these fish in whitewater rivers of the Central Amazon, we used data from the main channel benthic fish assemblage of the Japurá, Purus and Madeira rivers and tested the hypothesis that there are marked spatial and seasonal differences in the composition of the fish community among them. For this, we used a multivariate dispersion test, total β diversity and its decomposition into local (LCBD) and species contribution to β diversity (SCBD). Additionally, we tested for relationships between LCBD values and richness, total abundance, and environmental variables. We categorized species with higher SCBD values into resident or migratory to investigate the potential importance of floodplains to benthic fish assemblage of the main channel of whitewater rivers. Our results corroborate the proposed hypothesis, showing that there are seasonal and inter-river differences in benthic ichthyofauna, being more evident for the Purus River. LCBD showed strong negative relationships with species richness and total abundance, particularly in the Japurá and Madeira rivers in rising season, indicating that rivers and season with high uniqueness in their composition also had low richness and abundance. LCBD was negatively correlated with conductivity and pH, which increased with declining these environmental variables, as observed mainly in Japurá River in both seasons. Approximately one third of the species had higher than average SCBD values and were considered major contributors to β diversity, as well as classified as migratory. This demonstrates the importance of conducting studies that use spatial and seasonal variables, in addition to including the background fish fauna in conservation studies, expanding the protected area and taking into account the different patterns of diversity between rivers. Furthermore, these differences in assemblage composition might be explained by the asymmetrical spatial use of habitats during different seasons, strongly suggesting the importance of the flood-pulse cycle for maintaining diversity in this environment. [ABSTRACT FROM AUTHOR]

Coralligenous bioconstructions are one of the Mediterranean's most distinctive and biodiverse marine habitats. This research aimed to provide a preliminary characterization of macrobenthic coralligenous assemblages at four sites located in the Marine National Park of Karaburun-Sazan in Albania. We analyzed images obtained from videos recorded along underwater transects at two different depths. Over a total of 61 taxa (3 Rhodophyta, 2 Ochrophyta, 6 Chlorophyta, 30 Porifera, 5 Cnidaria, 3 Mollusca, 2 Annelida, 1 Arthropoda, 4 Bryozoa, 4 Echinodermata, and 1 Chordata), 53 were identified at the species level using taxonomic and semi-quantitative video image analysis, thus allowing an update to the Albanian coralligenous species list with 34 new species. This study revealed differences in species richness and composition among the investigated sites and between depths, with a high number of taxa exclusive to one site and a few taxa common to all sites. Seven taxa are protected by law, among which are the echinoderm Centrostephanus longispinus, included in the Bern (Annex II) and Barcelona (Annex II) Conventions and Habitat Directive (92/43 EEC) (Annex IV), and the sponges Spongia (Spongia) officinalis and S. (S.) lamella, included in Annex III of the Bern Convention. Only the alga Caulerpa cylindracea can be considered an alien species. Although preliminary, the present research indicated the occurrence of rich and diversified macrobenthic assemblages in the study area. Moreover, it has been demonstrated that video analysis can provide a biodiversity baseline within MPAs, where traditional methods involving invasive sampling cannot be applied, particularly in areas such as the Albanian coasts, where anthropogenic impacts have been historically significant. Finally, this work provides a first estimate of the structural biodiversity in a recently established marine protected area, thus representing the basis for subsequent monitoring. [ABSTRACT FROM AUTHOR]

The aquatic ecological health status was focused on the Huai River Basin (HRB) from the aspects of water quantity, water quality, water ecology, river connectivity, and riparian habitat environment. Ten monitoring sections were set up in the middle and upper reaches of HRB, and 5 experiments of each section were conducted in July and December from 2012 to 2014. Thus, relevant data on the species, the density of phytoplankton, zooplankton and benthic animals, the concentration of water physicochemical variables, and riparian habitat quality were obtained. Eleven key impact factors were chosen using frequency statistics, theoretical analysis, and correlation analysis methods, forming the evaluation index system of aquatic ecological health. Then, the indicator weight value was determined by the combined weight method, and the health degree was evaluated by the comprehensive index method. On the whole, the aquatic ecological health degree of the upper sections (D1 ~ D3) of the Shaying River ranges from 0.334 to 0.927, which is generally in a "sub-healthy" state. The aquatic ecological health degree of the main section of the Huai River (D8 ~ D10) ranges from 0.362 to 0.777, which is in the "critical" or "sub-healthy" state. The Huaidian Sluice (D5) and Fuyang Sluice (D6) in the middle and lower reaches of the Shaying River had the worst aquatic ecological health. Its water ecological health range is 0.283–0.523, and most of them are under "sub-pathologic." The research results have important theoretical and practical significance. They can enrich the evaluation theories and methods of river aquatic ecological health, help to grasp the aquatic ecological health status in HRB, and provide basic support for aquatic ecological protection and water pollution control in sluice-controlled rivers. [ABSTRACT FROM AUTHOR]

Sympatric adaptive phenotypic divergence should be underlain by genomic differentiation between subpopulations. When divergence drives similar patterns of phenotypic and ecological variation within species we expect evolution to draw on common allelic variation. We investigated divergence histories and genomic signatures of adaptive divergence between benthic and pelagic morphs of Icelandic Arctic charr. Divergence histories for each of four populations were reconstructed using coalescent modelling and 14,187 single nucleotide polymorphisms. Sympatric divergence with continuous gene flow was supported in two populations while allopatric divergence with secondary contact was supported in one population; we could not differentiate between demographic models in the fourth population. We detected parallel patterns of phenotypic divergence along benthic‐pelagic evolutionary trajectories among populations. Patterns of genomic differentiation between benthic and pelagic morphs were characterized by outlier loci in many narrow peaks of differentiation throughout the genome, which may reflect the eroding effects of gene flow on nearby neutral loci. We then used genome‐wide association analyses to relate both phenotypic (body shape and size) and ecological (carbon and nitrogen stable isotopes) variation to patterns of genomic differentiation. Many peaks of genomic differentiation were associated with phenotypic and ecological variation in the three highly divergent populations, suggesting a genomic basis for adaptive divergence. We detected little evidence for a parallel genomic basis of differentiation as most regions and outlier loci were not shared among populations. Our results show that adaptive divergence can have varied genomic consequences in populations with relatively recent common origins, similar divergence histories, and parallel phenotypic divergence. [ABSTRACT FROM AUTHOR]

In this study, Holocene paleoenvironmental changes were interpreted based on benthic foraminifers from a core (39°20′S-61°27′W) extracted from the Argentine Continental Shelf close to the Bahia Blanca Estuary, in the south of Buenos Aires Province. Foraminiferal fauna was determined, and found to include 44 species of 22 genera. From micropaleontological and sedimentological analysis, paleoenvironmental changes during the middle-late Holocene were recognized. Two stages were determined: from 8319–8045 to 7836-7623 Cal. yrs BP, the sediments reflected a shallow environment with estuarine conditions and low energy, enabling determination of a coastal depositional environment. As from ca. 7836–7623 up to ca. 651-557 Cal. yrs BP, the sediments indicated a passage towards to a shallow shelf environment with great marine influence, displaying a high degree of energy and oxygenation, which may have been related to a rise in sea level ca. 7836 -7623 Cal. yrs BP. The detailed study of the benthic foraminiferal fauna presented herein and the sedimentological and chronological analysis performed on the continental shelf next to the Bahía Blanca Estuary provide further proof of the relative location of the mean sea level during the middle Holocene transgressive hemicycle in Argentina. [ABSTRACT FROM AUTHOR]

The influence of hydrodynamic factors on the formation of zoobenthos communities in the coastal zone exposed to active wind-wave mixing, as well as in the deep part of water bodies characterized by the silt accumulation is considered for the Curonian Lagoon. The features of the qualitative and quantitative distribution of zoobenthos and their effect on determining the water quality using zoobenthos parameters are analyzed. Recommendations are given for the placement of hydrobiological monitoring stations based on zoobenthos parameters. [ABSTRACT FROM AUTHOR]

An autonomous lander equipped with a video camera (dropcam) was used for in situ observations of the bento-demersal macrofauna on the upper continental slope off Punta Pichalo in northern Chile, an area of permanent coastal upwelling processes, located ~70 km north of Iquique. The lander was deployed at nine stations and between 227 and 798 m of depth. According to morphological characteristics, 34 operational taxonomic units (OTUs) were identified to the lowest taxonomic level; 24 belonged to macroinvertebrates and 10 to fishes. Macroinvertebrates comprised 9 OTUs of crustaceans, seven cnidarians, and six echinoderms. Fishes included 3 OTUs of the order Chondrichthyes, 3 belonging to macrourid. Perciformes, Anguilliformes, and Alepocephaliformes were represented by one OTU each. Also, we observed one species of lanternfish (Myctophidae). Apart from the brachyuran decapod Lophorochinia parabranchia Garth, 1969 and euphausiids, all species were observed at depths greater than 560 m. The presence of one individual identified as the granulate dogfish Centroscyllium granulatum Günther, 1887 extended the known distribution range of this species about 1000 km to the north. Images taken at 795 m showed Bathyraja peruana McEachran & Miyake, 1984. Our study suggests that the upper continental slope of northern Chile harbors nearly undiscovered biodiversity, worth to be studied more intensively to complete the comparable sparse knowledge about marine biodiversity and species distribution at the continental margin in front of Chile. [ABSTRACT FROM AUTHOR]