137 results on '"Mendes, Paula M."'
Search Results
102. Fast, ultrasensitive detection of reactive oxygen species using a carbon nanotube based-electrocatalytic intracellular sensor
- Author
-
Rawson, Frankie J., Hicks, Jacqueline, Dodd, Nicholas, Abate, Wondwossen, Garrett, David J., Yip, Nga-Chi, Fejer, Gyorgy, Downard, Alison J., Baronian, Kim H.R., Jackson, Simon K., Mendes, Paula M., Rawson, Frankie J., Hicks, Jacqueline, Dodd, Nicholas, Abate, Wondwossen, Garrett, David J., Yip, Nga-Chi, Fejer, Gyorgy, Downard, Alison J., Baronian, Kim H.R., Jackson, Simon K., and Mendes, Paula M.
- Abstract
Herein, we report a highly sensitive electrocatalytic sensor-cell construct that can electrochemically communicate with the internal environment of immune cells (e.g., macrophages) via the selective monitoring of a particular reactive oxygen species (ROS), hydrogen peroxide. The sensor, which is based on vertically aligned single-walled carbon nanotubes functionalized with an osmium electrocatalyst, enabled the unprecedented detection of a local intracellular “pulse” of ROS on a short second time scale in response to bacterial endotoxin (lipopolysaccharide-LPS) stimulation. Our studies have shown that this initial pulse of ROS is dependent on NADPH oxidase (NOX) and toll like receptor 4 (TLR4). The results suggest that bacteria can induce a rapid intracellular pulse of ROS in macrophages that initiates the classical innate immune response of these cells to infection.
- Full Text
- View/download PDF
103. Electronic communication of cells with a surface mediated by boronic acid saccharide interactions
- Author
-
Stephenson-Brown, Alex, Yong, Sue, Mansor, Muhammad H., Hussein, Zarrar, Yip, Nga-Chi, Mendes, Paula M., Fossey, John S., Rawson, Frankie J., Stephenson-Brown, Alex, Yong, Sue, Mansor, Muhammad H., Hussein, Zarrar, Yip, Nga-Chi, Mendes, Paula M., Fossey, John S., and Rawson, Frankie J.
- Abstract
The fabrication of a molecularly tailored surface functionalised with a saccharide binding motif, a phenyl boronic acid derivative is reported.The functionalised surface facilitated the transfer of electrons, via unique electronic interactions mediated by the presence of the boronic acid, from a macrophage cell line. This is the first example of eukaryotic cellular-electrical communication mediated by the binding of cells via their cell–surface saccharide units.
- Full Text
- View/download PDF
104. Precise generation of selective surface-confined glycoprotein recognition sites
- Author
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Mitchell, Philippa, Tommasone, Stefano, Angioletti-Uberti, Stefano, Bowen, James, Mendes, Paula M, Mitchell, Philippa, Tommasone, Stefano, Angioletti-Uberti, Stefano, Bowen, James, and Mendes, Paula M
- Abstract
Since glycoproteins have become increasingly recognized as key players in a wide variety of disease processes, there is an increasing need for advanced affinity materials for highly selective glycoprotein binding. Herein, for the first time, a surface-initiated controlled radical polymerization is integrated with supramolecular templating and molecular imprinting to yield highly reproducible synthetic recognition sites on surfaces with dissociation constants (KDs) in the low micromolar range for target glycoproteins and minimal binding to non-target glycoproteins. Importantly, it is shown that the synthetic strategy has remarkable ability to distinguish the glycosylated and non-glycosylated forms of the same glycoprotein, with >5-fold difference in binding affinity. The precise control over the polymer film thickness and positioning of multiple carbohydrate receptors plays a crucial role in achieving enhanced affinity and selectivity. The generated functional materials of unprecedented glycoprotein recognition performance open up a wealth of opportunities in the biotechnological and biomedical fields.
105. Different formation kinetics and photoisomerization behavior of self-assembled monolayers of thiols and dithiolanes bearing azobenzene moieties
- Author
-
Yeung, Chun L., Charlesworth, Scott, Iqbal, Parvez, Bowen, James, Preece, Jon A., Mendes, Paula M., Yeung, Chun L., Charlesworth, Scott, Iqbal, Parvez, Bowen, James, Preece, Jon A., and Mendes, Paula M.
- Abstract
Self-assembled monolayers (SAMs) containing azobenzene moieties are very attractive for a wide range of applications, including molecular electronics and photonics, bio-interface engineering and sensoring. However, very little is known about the aggregation and photoswitching behavior that azobenzene units undergo during the SAM formation process. Here, we demonstrate that the formation of thiol based SAMs containing azobenzenes (denoted as AzoSH) on gold surfaces is characterised by a two step adsorption kinetics, while a three-step assembly process has been identified for dithiolane-based SAMs containing azobenzenes (denoted AzoSS). The H-aggregation on the AzoSS SAMs was found to be remarkably dependent on the time of self-assembly, with less aggregation as a function of time. While photoisomerization of the AzoSH was suppressed for all different assembly times, the reversible trans–cis photoisomerization of AzoSS SAMs formed over 24 hours was clearly observed upon alternating UV and Vis light irradiation. We contend that detailed information on formation kinetics and related optical properties is of crucial importance for elucidating the photoswitching capabilities of azobenzene based SAMs.
106. Room temperature thermally evaporated thin Au film on Si suitable for application of thiol self-assembled monolayers in MEMS/NEMS sensors
- Author
-
Mahmoodi, Nasim, Rushdi, Abduljabbar I., Bowen, James, Sabour, Aydin, Anthony, Carl, Mendes, Paula M., Preece, Jon A., Mahmoodi, Nasim, Rushdi, Abduljabbar I., Bowen, James, Sabour, Aydin, Anthony, Carl, Mendes, Paula M., and Preece, Jon A.
- Abstract
Gold is a standard surface for attachment of thiol-based self-assembled monolayers (SAMs). To achieve uniform defect free SAM coatings, which are essential for bio/chemical sensing applications, the gold surface must have low roughness, and be highly orientated. These requirements are normally achieved by either heating during Au deposition or post deposition Au surface annealing. This paper shows that room temperature deposited gold, can afford equivalent gold surfaces, if the gold deposition parameters are carefully controlled. This observation is an important result as heating (or annealing) of the deposited gold can have a detrimental effect on the mechanical properties of the silicon on which the gold is deposited used in microsensors. The paper presents the investigation of the morphology and crystalline structure of Au film prepared by thermal evaporation at room temperature on silicon. The effect of gold deposition rate is studied, and it is shown that by increasing the deposition rate from 0.02 nm s-1 to 0.14 nm s-1 the gold surface RMS roughness decreases, whereas the grain size of the deposited gold is seen to follow a step function decreasing suddenly between 0.06 and 0.10 nm s-1. The XRD intensity of the preferentially [111] orientated gold crystallites is also seen to increase as the deposition rate increases up to a deposition rate of 0.14 nm s-1. Formation and characterization of 1-dodecanethiol on these Au coated samples is also studied using contact angle. It is shown that by increasing the Au deposition rate the contact angle hysteresis (CAH) decreases until it plateaus, for a deposition rate greater than 0.14 nm s-1, where the CAH is smaller than 9 degrees which is an indication of homogeneous SAM formation, on a smooth surface.
107. Precise generation of selective surface-confined glycoprotein recognition sites
- Author
-
Mitchell, Philippa, Tommasone, Stefano, Angioletti-Uberti, Stefano, Bowen, James, Mendes, Paula M, Mitchell, Philippa, Tommasone, Stefano, Angioletti-Uberti, Stefano, Bowen, James, and Mendes, Paula M
- Abstract
Since glycoproteins have become increasingly recognized as key players in a wide variety of disease processes, there is an increasing need for advanced affinity materials for highly selective glycoprotein binding. Herein, for the first time, a surface-initiated controlled radical polymerization is integrated with supramolecular templating and molecular imprinting to yield highly reproducible synthetic recognition sites on surfaces with dissociation constants (KDs) in the low micromolar range for target glycoproteins and minimal binding to non-target glycoproteins. Importantly, it is shown that the synthetic strategy has remarkable ability to distinguish the glycosylated and non-glycosylated forms of the same glycoprotein, with >5-fold difference in binding affinity. The precise control over the polymer film thickness and positioning of multiple carbohydrate receptors plays a crucial role in achieving enhanced affinity and selectivity. The generated functional materials of unprecedented glycoprotein recognition performance open up a wealth of opportunities in the biotechnological and biomedical fields.
108. Different formation kinetics and photoisomerization behavior of self-assembled monolayers of thiols and dithiolanes bearing azobenzene moieties
- Author
-
Yeung, Chun L., Charlesworth, Scott, Iqbal, Parvez, Bowen, James, Preece, Jon A., Mendes, Paula M., Yeung, Chun L., Charlesworth, Scott, Iqbal, Parvez, Bowen, James, Preece, Jon A., and Mendes, Paula M.
- Abstract
Self-assembled monolayers (SAMs) containing azobenzene moieties are very attractive for a wide range of applications, including molecular electronics and photonics, bio-interface engineering and sensoring. However, very little is known about the aggregation and photoswitching behavior that azobenzene units undergo during the SAM formation process. Here, we demonstrate that the formation of thiol based SAMs containing azobenzenes (denoted as AzoSH) on gold surfaces is characterised by a two step adsorption kinetics, while a three-step assembly process has been identified for dithiolane-based SAMs containing azobenzenes (denoted AzoSS). The H-aggregation on the AzoSS SAMs was found to be remarkably dependent on the time of self-assembly, with less aggregation as a function of time. While photoisomerization of the AzoSH was suppressed for all different assembly times, the reversible trans–cis photoisomerization of AzoSS SAMs formed over 24 hours was clearly observed upon alternating UV and Vis light irradiation. We contend that detailed information on formation kinetics and related optical properties is of crucial importance for elucidating the photoswitching capabilities of azobenzene based SAMs.
109. Tailoring the electrochemical properties of carbon nanotube modified indium tin oxide via in situ grafting of aryl diazonium
- Author
-
Hicks, Jacqueline, Wong, Zhi Yi, Scurr, David J., Silman, Nigel, Jackson, Simon K., Mendes, Paula M., Aylott, Jonathan W., Rawson, Frankie J., Hicks, Jacqueline, Wong, Zhi Yi, Scurr, David J., Silman, Nigel, Jackson, Simon K., Mendes, Paula M., Aylott, Jonathan W., and Rawson, Frankie J.
- Abstract
Our ability to tailor the electronic properties of surfaces by nanomodification is paramount for various applications, including development of sensing, fuel cell, and solar technologies. Moreover, in order to improve the rational design of conducting surfaces, an improved understanding of structure/function relationships of nanomodifications and effect they have on the underlying electronic properties is required. Herein, we report on the tuning and optimization of the electrochemical properties of indium tin oxide (ITO) functionalized with single-walled carbon nanotubes (SWCNTs). This was achieved by controlling in situ grafting of aryl amine diazonium films on the nanoscale which were used to covalently tether SWCNTs. The structure/function relationship of these nanomodifications on the electronic properties of ITO was elucidated via time-of-flight secondary ion mass spectrometry and electrochemical and physical characterization techniques which has led to new mechanistic insights into the in situ grafting of diazonium. We discovered that the connecting bond is a nitro group which is covalently linked to a carbon on the aryl amine. The increased understanding of the surface chemistry gained through these studies enabled us to fabricate surfaces with optimized electron transfer kinetics. The knowledge gained from these studies allows for the rational design and tuning of the electronic properties of ITO-based conducting surfaces important for development of various electronic applications.
- Full Text
- View/download PDF
110. Electrochemical communication with the inside of cells using micro-patterned vertical carbon nanofibre electrodes
- Author
-
Rawson, Frankie J., Cole, M.T, Hicks, Jacqueline, Aylott, Jonathan W., Milne, W.I., Collins, C.M., Jackson, Simon K., Silman, Nigel, Mendes, Paula M., Rawson, Frankie J., Cole, M.T, Hicks, Jacqueline, Aylott, Jonathan W., Milne, W.I., Collins, C.M., Jackson, Simon K., Silman, Nigel, and Mendes, Paula M.
- Abstract
With the rapidly increasing demands for ultrasensitive biodetection, the design and applications of new nano-scale materials for development of sensors based on optical and electrochemical transducers have attracted substantial interest. In particular, given the comparable sizes of nanomaterials and biomolecules, there exist plenty of opportunities to develop functional nanoprobes with biomolecules for highly sensitive and selective biosensing, shedding new light on cellular behaviour. Towards this aim, herein we interface cells with patterned nano-arrays of carbon nanofibers forming a nanosensor-cell construct. We show that such a construct is capable of electrochemically communicating with the intracellular environment.
- Full Text
- View/download PDF
111. Electronic communication of cells with a surface mediated by boronic acid saccharide interactions
- Author
-
Stephenson-Brown, Alex, Yong, Sue, Mansor, Muhammad H., Hussein, Zarrar, Yip, Nga-Chi, Mendes, Paula M., Fossey, John S., Rawson, Frankie J., Stephenson-Brown, Alex, Yong, Sue, Mansor, Muhammad H., Hussein, Zarrar, Yip, Nga-Chi, Mendes, Paula M., Fossey, John S., and Rawson, Frankie J.
- Abstract
The fabrication of a molecularly tailored surface functionalised with a saccharide binding motif, a phenyl boronic acid derivative is reported.The functionalised surface facilitated the transfer of electrons, via unique electronic interactions mediated by the presence of the boronic acid, from a macrophage cell line. This is the first example of eukaryotic cellular-electrical communication mediated by the binding of cells via their cell–surface saccharide units.
- Full Text
- View/download PDF
112. Fast, ultrasensitive detection of reactive oxygen species using a carbon nanotube based-electrocatalytic intracellular sensor
- Author
-
Rawson, Frankie J., Hicks, Jacqueline, Dodd, Nicholas, Abate, Wondwossen, Garrett, David J., Yip, Nga-Chi, Fejer, Gyorgy, Downard, Alison J., Baronian, Kim H.R., Jackson, Simon K., Mendes, Paula M., Rawson, Frankie J., Hicks, Jacqueline, Dodd, Nicholas, Abate, Wondwossen, Garrett, David J., Yip, Nga-Chi, Fejer, Gyorgy, Downard, Alison J., Baronian, Kim H.R., Jackson, Simon K., and Mendes, Paula M.
- Abstract
Herein, we report a highly sensitive electrocatalytic sensor-cell construct that can electrochemically communicate with the internal environment of immune cells (e.g., macrophages) via the selective monitoring of a particular reactive oxygen species (ROS), hydrogen peroxide. The sensor, which is based on vertically aligned single-walled carbon nanotubes functionalized with an osmium electrocatalyst, enabled the unprecedented detection of a local intracellular “pulse” of ROS on a short second time scale in response to bacterial endotoxin (lipopolysaccharide-LPS) stimulation. Our studies have shown that this initial pulse of ROS is dependent on NADPH oxidase (NOX) and toll like receptor 4 (TLR4). The results suggest that bacteria can induce a rapid intracellular pulse of ROS in macrophages that initiates the classical innate immune response of these cells to infection.
- Full Text
- View/download PDF
113. Room temperature thermally evaporated thin Au film on Si suitable for application of thiol self-assembled monolayers in MEMS/NEMS sensors
- Author
-
Mahmoodi, Nasim, Rushdi, Abduljabbar I., Bowen, James, Sabour, Aydin, Anthony, Carl, Mendes, Paula M., Preece, Jon A., Mahmoodi, Nasim, Rushdi, Abduljabbar I., Bowen, James, Sabour, Aydin, Anthony, Carl, Mendes, Paula M., and Preece, Jon A.
- Abstract
Gold is a standard surface for attachment of thiol-based self-assembled monolayers (SAMs). To achieve uniform defect free SAM coatings, which are essential for bio/chemical sensing applications, the gold surface must have low roughness, and be highly orientated. These requirements are normally achieved by either heating during Au deposition or post deposition Au surface annealing. This paper shows that room temperature deposited gold, can afford equivalent gold surfaces, if the gold deposition parameters are carefully controlled. This observation is an important result as heating (or annealing) of the deposited gold can have a detrimental effect on the mechanical properties of the silicon on which the gold is deposited used in microsensors. The paper presents the investigation of the morphology and crystalline structure of Au film prepared by thermal evaporation at room temperature on silicon. The effect of gold deposition rate is studied, and it is shown that by increasing the deposition rate from 0.02 nm s-1 to 0.14 nm s-1 the gold surface RMS roughness decreases, whereas the grain size of the deposited gold is seen to follow a step function decreasing suddenly between 0.06 and 0.10 nm s-1. The XRD intensity of the preferentially [111] orientated gold crystallites is also seen to increase as the deposition rate increases up to a deposition rate of 0.14 nm s-1. Formation and characterization of 1-dodecanethiol on these Au coated samples is also studied using contact angle. It is shown that by increasing the Au deposition rate the contact angle hysteresis (CAH) decreases until it plateaus, for a deposition rate greater than 0.14 nm s-1, where the CAH is smaller than 9 degrees which is an indication of homogeneous SAM formation, on a smooth surface.
114. Tailoring the electrochemical properties of carbon nanotube modified indium tin oxide via in situ grafting of aryl diazonium
- Author
-
Hicks, Jacqueline, Wong, Zhi Yi, Scurr, David J., Silman, Nigel, Jackson, Simon K., Mendes, Paula M., Aylott, Jonathan W., Rawson, Frankie J., Hicks, Jacqueline, Wong, Zhi Yi, Scurr, David J., Silman, Nigel, Jackson, Simon K., Mendes, Paula M., Aylott, Jonathan W., and Rawson, Frankie J.
- Abstract
Our ability to tailor the electronic properties of surfaces by nanomodification is paramount for various applications, including development of sensing, fuel cell, and solar technologies. Moreover, in order to improve the rational design of conducting surfaces, an improved understanding of structure/function relationships of nanomodifications and effect they have on the underlying electronic properties is required. Herein, we report on the tuning and optimization of the electrochemical properties of indium tin oxide (ITO) functionalized with single-walled carbon nanotubes (SWCNTs). This was achieved by controlling in situ grafting of aryl amine diazonium films on the nanoscale which were used to covalently tether SWCNTs. The structure/function relationship of these nanomodifications on the electronic properties of ITO was elucidated via time-of-flight secondary ion mass spectrometry and electrochemical and physical characterization techniques which has led to new mechanistic insights into the in situ grafting of diazonium. We discovered that the connecting bond is a nitro group which is covalently linked to a carbon on the aryl amine. The increased understanding of the surface chemistry gained through these studies enabled us to fabricate surfaces with optimized electron transfer kinetics. The knowledge gained from these studies allows for the rational design and tuning of the electronic properties of ITO-based conducting surfaces important for development of various electronic applications.
- Full Text
- View/download PDF
115. Electrochemical communication with the inside of cells using micro-patterned vertical carbon nanofibre electrodes
- Author
-
Rawson, Frankie J., Cole, M.T, Hicks, Jacqueline, Aylott, Jonathan W., Milne, W.I., Collins, C.M., Jackson, Simon K., Silman, Nigel, Mendes, Paula M., Rawson, Frankie J., Cole, M.T, Hicks, Jacqueline, Aylott, Jonathan W., Milne, W.I., Collins, C.M., Jackson, Simon K., Silman, Nigel, and Mendes, Paula M.
- Abstract
With the rapidly increasing demands for ultrasensitive biodetection, the design and applications of new nano-scale materials for development of sensors based on optical and electrochemical transducers have attracted substantial interest. In particular, given the comparable sizes of nanomaterials and biomolecules, there exist plenty of opportunities to develop functional nanoprobes with biomolecules for highly sensitive and selective biosensing, shedding new light on cellular behaviour. Towards this aim, herein we interface cells with patterned nano-arrays of carbon nanofibers forming a nanosensor-cell construct. We show that such a construct is capable of electrochemically communicating with the intracellular environment.
- Full Text
- View/download PDF
116. Fast, ultrasensitive detection of reactive oxygen species using a carbon nanotube based-electrocatalytic intracellular sensor
- Author
-
Rawson, Frankie J., Hicks, Jacqueline, Dodd, Nicholas, Abate, Wondwossen, Garrett, David J., Yip, Nga-Chi, Fejer, Gyorgy, Downard, Alison J., Baronian, Kim H.R., Jackson, Simon K., Mendes, Paula M., Rawson, Frankie J., Hicks, Jacqueline, Dodd, Nicholas, Abate, Wondwossen, Garrett, David J., Yip, Nga-Chi, Fejer, Gyorgy, Downard, Alison J., Baronian, Kim H.R., Jackson, Simon K., and Mendes, Paula M.
- Abstract
Herein, we report a highly sensitive electrocatalytic sensor-cell construct that can electrochemically communicate with the internal environment of immune cells (e.g., macrophages) via the selective monitoring of a particular reactive oxygen species (ROS), hydrogen peroxide. The sensor, which is based on vertically aligned single-walled carbon nanotubes functionalized with an osmium electrocatalyst, enabled the unprecedented detection of a local intracellular “pulse” of ROS on a short second time scale in response to bacterial endotoxin (lipopolysaccharide-LPS) stimulation. Our studies have shown that this initial pulse of ROS is dependent on NADPH oxidase (NOX) and toll like receptor 4 (TLR4). The results suggest that bacteria can induce a rapid intracellular pulse of ROS in macrophages that initiates the classical innate immune response of these cells to infection.
- Full Text
- View/download PDF
117. Electronic communication of cells with a surface mediated by boronic acid saccharide interactions
- Author
-
Stephenson-Brown, Alex, Yong, Sue, Mansor, Muhammad H., Hussein, Zarrar, Yip, Nga-Chi, Mendes, Paula M., Fossey, John S., Rawson, Frankie J., Stephenson-Brown, Alex, Yong, Sue, Mansor, Muhammad H., Hussein, Zarrar, Yip, Nga-Chi, Mendes, Paula M., Fossey, John S., and Rawson, Frankie J.
- Abstract
The fabrication of a molecularly tailored surface functionalised with a saccharide binding motif, a phenyl boronic acid derivative is reported.The functionalised surface facilitated the transfer of electrons, via unique electronic interactions mediated by the presence of the boronic acid, from a macrophage cell line. This is the first example of eukaryotic cellular-electrical communication mediated by the binding of cells via their cell–surface saccharide units.
- Full Text
- View/download PDF
118. Tailoring the electrochemical properties of carbon nanotube modified indium tin oxide via in situ grafting of aryl diazonium
- Author
-
Hicks, Jacqueline, Wong, Zhi Yi, Scurr, David J., Silman, Nigel, Jackson, Simon K., Mendes, Paula M., Aylott, Jonathan W., Rawson, Frankie J., Hicks, Jacqueline, Wong, Zhi Yi, Scurr, David J., Silman, Nigel, Jackson, Simon K., Mendes, Paula M., Aylott, Jonathan W., and Rawson, Frankie J.
- Abstract
Our ability to tailor the electronic properties of surfaces by nanomodification is paramount for various applications, including development of sensing, fuel cell, and solar technologies. Moreover, in order to improve the rational design of conducting surfaces, an improved understanding of structure/function relationships of nanomodifications and effect they have on the underlying electronic properties is required. Herein, we report on the tuning and optimization of the electrochemical properties of indium tin oxide (ITO) functionalized with single-walled carbon nanotubes (SWCNTs). This was achieved by controlling in situ grafting of aryl amine diazonium films on the nanoscale which were used to covalently tether SWCNTs. The structure/function relationship of these nanomodifications on the electronic properties of ITO was elucidated via time-of-flight secondary ion mass spectrometry and electrochemical and physical characterization techniques which has led to new mechanistic insights into the in situ grafting of diazonium. We discovered that the connecting bond is a nitro group which is covalently linked to a carbon on the aryl amine. The increased understanding of the surface chemistry gained through these studies enabled us to fabricate surfaces with optimized electron transfer kinetics. The knowledge gained from these studies allows for the rational design and tuning of the electronic properties of ITO-based conducting surfaces important for development of various electronic applications.
- Full Text
- View/download PDF
119. Electrochemical communication with the inside of cells using micro-patterned vertical carbon nanofibre electrodes
- Author
-
Rawson, Frankie J., Cole, M.T, Hicks, Jacqueline, Aylott, Jonathan W., Milne, W.I., Collins, C.M., Jackson, Simon K., Silman, Nigel, Mendes, Paula M., Rawson, Frankie J., Cole, M.T, Hicks, Jacqueline, Aylott, Jonathan W., Milne, W.I., Collins, C.M., Jackson, Simon K., Silman, Nigel, and Mendes, Paula M.
- Abstract
With the rapidly increasing demands for ultrasensitive biodetection, the design and applications of new nano-scale materials for development of sensors based on optical and electrochemical transducers have attracted substantial interest. In particular, given the comparable sizes of nanomaterials and biomolecules, there exist plenty of opportunities to develop functional nanoprobes with biomolecules for highly sensitive and selective biosensing, shedding new light on cellular behaviour. Towards this aim, herein we interface cells with patterned nano-arrays of carbon nanofibers forming a nanosensor-cell construct. We show that such a construct is capable of electrochemically communicating with the intracellular environment.
- Full Text
- View/download PDF
120. Electronic communication of cells with a surface mediated by boronic acid saccharide interactions
- Author
-
Stephenson-Brown, Alex, Yong, Sue, Mansor, Muhammad H., Hussein, Zarrar, Yip, Nga-Chi, Mendes, Paula M., Fossey, John S., Rawson, Frankie J., Stephenson-Brown, Alex, Yong, Sue, Mansor, Muhammad H., Hussein, Zarrar, Yip, Nga-Chi, Mendes, Paula M., Fossey, John S., and Rawson, Frankie J.
- Abstract
The fabrication of a molecularly tailored surface functionalised with a saccharide binding motif, a phenyl boronic acid derivative is reported.The functionalised surface facilitated the transfer of electrons, via unique electronic interactions mediated by the presence of the boronic acid, from a macrophage cell line. This is the first example of eukaryotic cellular-electrical communication mediated by the binding of cells via their cell–surface saccharide units.
- Full Text
- View/download PDF
121. Fast, ultrasensitive detection of reactive oxygen species using a carbon nanotube based-electrocatalytic intracellular sensor
- Author
-
Rawson, Frankie J., Hicks, Jacqueline, Dodd, Nicholas, Abate, Wondwossen, Garrett, David J., Yip, Nga-Chi, Fejer, Gyorgy, Downard, Alison J., Baronian, Kim H.R., Jackson, Simon K., Mendes, Paula M., Rawson, Frankie J., Hicks, Jacqueline, Dodd, Nicholas, Abate, Wondwossen, Garrett, David J., Yip, Nga-Chi, Fejer, Gyorgy, Downard, Alison J., Baronian, Kim H.R., Jackson, Simon K., and Mendes, Paula M.
- Abstract
Herein, we report a highly sensitive electrocatalytic sensor-cell construct that can electrochemically communicate with the internal environment of immune cells (e.g., macrophages) via the selective monitoring of a particular reactive oxygen species (ROS), hydrogen peroxide. The sensor, which is based on vertically aligned single-walled carbon nanotubes functionalized with an osmium electrocatalyst, enabled the unprecedented detection of a local intracellular “pulse” of ROS on a short second time scale in response to bacterial endotoxin (lipopolysaccharide-LPS) stimulation. Our studies have shown that this initial pulse of ROS is dependent on NADPH oxidase (NOX) and toll like receptor 4 (TLR4). The results suggest that bacteria can induce a rapid intracellular pulse of ROS in macrophages that initiates the classical innate immune response of these cells to infection.
- Full Text
- View/download PDF
122. ChemInform Abstract: Type III-B Rotaxane Dendrimers.
- Author
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Ho, Watson K.‐W., Lee, Siu‐Fung, Wong, Chi‐Hin, Zhu, Xiao‐Ming, Kwan, Chak‐Shing, Chak, Chun‐Pong, Mendes, Paula M., Cheng, Christopher H. K., and Leung, Ken Cham‐Fai
- Published
- 2014
- Full Text
- View/download PDF
123. Real-time electrocatalytic sensing of cellular respiration.
- Author
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Yip, Nga-Chi, Rawson, Frankie J, Tsang, Chi Wai, and Mendes, Paula M
- Subjects
- *
ELECTROCATALYSIS , *CELL respiration , *ELECTROCHEMICAL sensors , *TOXICOLOGICAL chemistry , *FERROCENE , *CARBOXYLIC acids - Abstract
Abstract: In the present work we develop a real-time electrochemical mediator assay to enable the assessment of cell numbers and chemical toxicity. This allowed us to monitor metabolism down to a single cell in a low cost easy to use rapid assay which is not possible with current technology. The developed assay was based on the determination of oxygen. This was made possible via the use of electrochemical mediator ferrocene carboxylic acid (FcA). The FcA showed distinctive catalytic properties in interacting with reactive oxygen species generated from oxygen when compared to ferrocene methanol (FcMeOH). A deeper insight into the chemistry controlling this behaviour is provided. The behaviour is then taken advantage of to develop a cellular aerobic respiration assay. We describe the properties of the FcA system to detect, in real-time, the oxygen consumption of Escherichia coli DH5-α (E. coli). We demonstrated that the FcA-based oxygen assay is highly sensitive, and using a population of cells, oxygen consumption rates could be calculated down to a single cell level. More importantly, the results can be accomplished in minutes, considerably outperforming current commercially available biooxygen demand assays. The developed assay is expected to have a significant impact in diverse fields and industries, ranging from environmental toxicology through to pharmaceutical and agrochemical industries. [Copyright &y& Elsevier]
- Published
- 2014
- Full Text
- View/download PDF
124. Nanovibrational Stimulation of Escherichia coli Mitigates Surface Adhesion by Altering Cell Membrane Potential.
- Author
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Bazzoli DG, Mahmoodi N, Verrill TA, Overton TW, and Mendes PM
- Subjects
- Vibration, Biofilms, Nanotechnology, Cell Membrane metabolism, Escherichia coli physiology, Bacterial Adhesion, Surface Properties, Membrane Potentials
- Abstract
Mechanical forces shape living matter from the macro- to the microscale as both eukaryotic and prokaryotic cells are force wielders and sensors. However, whereas such forces have been used to control mechanically dependent behaviors in mammalian cells, we lack the same level of understanding in bacteria. Surface adhesion, the initial stages of biofilm formation and surface biofouling, is a mechanically dependent process, which makes it an ideal target for mechano-control. In this study, we employed nanometer surface vibrations to mechanically stimulate bacteria and investigate their effect on adhesion. We discovered that vibrational stimulation at the nanoscale consistently reduces surface adhesion by altering cell membrane potential. Our findings identify a link between bacteria electrophysiology and surface adhesion and provide evidence that the nanometric mechanical "tickling" of bacteria can inhibit surface adhesion.
- Published
- 2024
- Full Text
- View/download PDF
125. Real-time monitoring of voltage-responsive biomolecular binding onto electro-switchable surfaces.
- Author
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Pringle NE, Mendes PM, and Paxton WF
- Subjects
- Adsorption, Biotin chemistry, Biotinylation, Quartz Crystal Microbalance Techniques methods, Biosensing Techniques methods, Surface Properties, Avidin chemistry, Gold chemistry
- Abstract
Voltage-responsive biosensors capable of monitoring real-time adsorption behavior of biological analytes onto electroactive surfaces offer attractive strategies for disease detection, separations, and other adsorption-dependent analytical techniques. Adsorption of biological analytes onto electrically switchable surfaces can be modelled using neutravidin and biotin. Here, we report self-assembled monolayers formed from voltage-switchable biotinylated molecules on gold surfaces with tunable sensitivity to neutravidin in response to applied voltages. By using electrochemical quartz crystal microbalance (EQCM), we demonstrated real-time switchable behavior of these bio-surfaces and investigate the range of sensitivity by varying the potential of the same surfaces from -400 mV to open circuit potential (+155 mV) to +300 mV. We compared the tunability of the mixed surfaces to bare Au surfaces, voltage inert surfaces, and switchable biotinylated surfaces. Our results indicate that quartz crystal microbalance allows real-time changes in analyte binding behavior, which enabled observing the evolution of neutravidin sensitivity as the applied voltage was shifted. EQCM could in principle be used in kinetic studies or to optimize voltage-switchable surfaces in adsorption-based diagnostics., (© 2024. The Author(s), under exclusive licence to Springer-Verlag GmbH, DE part of Springer Nature.)
- Published
- 2024
- Full Text
- View/download PDF
126. An integrated perspective on measuring cytokines to inform CAR-T bioprocessing.
- Author
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Williamson HK and Mendes PM
- Subjects
- Humans, Immunotherapy, Adoptive methods, T-Lymphocytes immunology, Cytokines metabolism, Receptors, Chimeric Antigen immunology, Biosensing Techniques methods
- Abstract
Chimeric antigen receptor (CAR)-T cells are emerging as a generation-defining therapeutic however their manufacture remains a major barrier to meeting increased market demand. Monitoring critical quality attributes (CQAs) and critical process parameters (CPPs) during manufacture would vastly enrich acquired information related to the process and product, providing feedback to enable real-time decision making. Here we identify specific CAR-T cytokines as value-adding analytes and discuss their roles as plausible CPPs and CQAs. High sensitivity sensing technologies which can be easily integrated into manufacture workflows are essential to implement real-time monitoring of these cytokines. We therefore present biosensors as enabling technologies and evaluate recent advancements in cytokine detection in cell cultures, offering promising translatability to CAR-T biomanufacture. Finally, we outline emerging sensing technologies with future promise, and provide an overall outlook on existing gaps to implementation and the optimal sensing platform to enable cytokine monitoring in CAR-T biomanufacture., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper. The authors declare no competing interests., (Copyright © 2024 The Author(s). Published by Elsevier Inc. All rights reserved.)
- Published
- 2024
- Full Text
- View/download PDF
127. Discovery of selective monosaccharide receptors via dynamic combinatorial chemistry.
- Author
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Alena-Rodriguez M, Fernandez-Villamarin M, Alfonso I, and Mendes PM
- Subjects
- Models, Molecular, Phenylalanine chemistry, Phenylalanine analogs & derivatives, Phenylalanine chemical synthesis, Combinatorial Chemistry Techniques, Monosaccharides chemistry
- Abstract
The molecular recognition of saccharides by synthetic hosts has become an appealing but elusive task in the last decades. Herein, we combine Dynamic Combinatorial Chemistry (DCC) for the rapid self-assembly and screening of virtual libraries of receptors, with the use of ITC and NMR to validate the hits and molecular modelling to understand the binding mechanisms. We discovered a minimalistic receptor, 1F ( N -benzyl-L-phenylalanine), with considerable affinity for fructose ( K = 1762 M
a = 1762 M-1 ) and remarkable selectivity (>50-fold) over other common monosaccharides. The approach accelerates the discovery process of receptors for saccharides.- Published
- 2024
- Full Text
- View/download PDF
128. Recapitulating the Lateral Organization of Membrane Receptors at the Nanoscale.
- Author
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Tabaei SR, Fernandez-Villamarin M, Vafaei S, Rooney L, and Mendes PM
- Subjects
- Cell Membrane, Ligands, Lipid Bilayers, Liposomes, Molecular Imprinting
- Abstract
Many cell membrane functions emerge from the lateral presentation of membrane receptors. The link between the nanoscale organization of the receptors and ligand binding remains, however, mostly unclear. In this work, we applied surface molecular imprinting and utilized the phase behavior of lipid bilayers to create platforms that recapitulate the lateral organization of membrane receptors at the nanoscale. We used liposomes decorated with amphiphilic boronic acids that commonly serve as synthetic saccharide receptors and generated three lateral modes of receptor presentation─random distribution, nanoclustering, and receptor crowding─and studied their interaction with saccharides. In comparison to liposomes with randomly dispersed receptors, surface-imprinted liposomes resulted in more than a 5-fold increase in avidity. Quantifying the binding affinity and cooperativity proved that the boost was mediated by the formation of the nanoclusters rather than a local increase in the receptor concentration. In contrast, receptor crowding, despite the presence of increased local receptor concentrations, prevented multivalent oligosaccharide binding due to steric effects. The findings demonstrate the significance of nanometric aspects of receptor presentation and generation of multivalent ligands including artificial lectins for the sensitive and specific detection of glycans.
- Published
- 2023
- Full Text
- View/download PDF
129. Highly Selective Aptamer-Molecularly Imprinted Polymer Hybrids for Recognition of SARS-CoV-2 Spike Protein Variants.
- Author
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Sullivan MV, Allabush F, Flynn H, Balansethupathy B, Reed JA, Barnes ET, Robson C, O'Hara P, Milburn LJ, Bunka D, Tolley A, Mendes PM, Tucker JHR, and Turner NW
- Abstract
Virus recognition has been driven to the forefront of molecular recognition research due to the COVID-19 pandemic. Development of highly sensitive recognition elements, both natural and synthetic is critical to facing such a global issue. However, as viruses mutate, it is possible for their recognition to wane through changes in the target substrate, which can lead to detection avoidance and increased false negatives. Likewise, the ability to detect specific variants is of great interest for clinical analysis of all viruses. Here, a hybrid aptamer-molecularly imprinted polymer (aptaMIP), that maintains selective recognition for the spike protein template across various mutations, while improving performance over individual aptamer or MIP components (which themselves demonstrate excellent performance). The aptaMIP exhibits an equilibrium dissociation constant of 1.61 nM toward its template which matches or exceeds published examples of imprinting of the spike protein. The work here demonstrates that "fixing" the aptamer within a polymeric scaffold increases its capability to selectivity recognize its original target and points toward a methodology that will allow variant selective molecular recognition with exceptional affinity., Competing Interests: Aptamer Group has patented the aptamer sequence (Optimer) presented in this work. The academic authors have not conflicts of interest., (© 2023 The Authors. Global Challenges published by Wiley‐VCH GmbH.)
- Published
- 2023
- Full Text
- View/download PDF
130. Establishing a quantitative fluorescence assay for the rapid detection of kynurenine in urine.
- Author
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Patel K, Fernandez-Villamarin M, Ward C, Lord JM, Tino P, and Mendes PM
- Subjects
- Chromatography, High Pressure Liquid, Humans, COVID-19 diagnosis, Kynurenine
- Abstract
The kynurenine metabolite is associated with many diseases and disorders, ranging from diabetes and sepsis to more recently COVID-19. Here we report a fluorescence-based assay for the detection of kynurenine in urine using a specific chemosensor, 3-formyl-4-(ethylthio)-7-(diethylamino)-coumarin. The assay produces a linear response at clinically relevant ranges (1-20 μM), with a limit of detection of 0.7 μM. The average standard addition recoveries of kynurenine in synthetic urine samples are near to 100%, and the relative standard deviation values are less than 8%. The established fluorescence assay for quantitative analysis of kynurenine in urine is facile, sensitive and accurate and holds great potential for low-cost and high-throughput analysis of kynurenine in clinical laboratory settings.
- Published
- 2022
- Full Text
- View/download PDF
131. Platelet activation by charged ligands and nanoparticles: platelet glycoprotein receptors as pattern recognition receptors.
- Author
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Montague SJ, Patel P, Martin EM, Slater A, Quintanilla LG, Perrella G, Kardeby C, Nagy M, Mezzano D, Mendes PM, and Watson SP
- Subjects
- Humans, Ligands, Signal Transduction, Blood Platelets metabolism, Nanoparticles metabolism, Platelet Activation immunology, Platelet Membrane Glycoproteins metabolism, Receptors, Pattern Recognition metabolism
- Abstract
Charge interactions play a critical role in the activation of the innate immune system by damage- and pathogen-associated molecular pattern receptors. The ability of these receptors to recognize a wide spectrum of ligands through a common mechanism is critical in host defense. In this article, we argue that platelet glycoprotein receptors that signal through conserved tyrosine-based motifs function as pattern recognition receptors (PRRs) for charged endogenous and exogenous ligands, including sulfated polysaccharides, charged proteins and nanoparticles. This is exemplified by GPVI, CLEC-2 and PEAR1 which are activated by a wide spectrum of endogenous and exogenous ligands, including diesel exhaust particles, sulfated polysaccharides and charged surfaces. We propose that this mechanism has evolved to drive rapid activation of platelets at sites of injury, but that under some conditions it can drive occlusive thrombosis, for example, when blood comes into contact with infectious agents or toxins. In this Opinion Article, we discuss mechanisms behind charge-mediated platelet activation and opportunities for designing nanoparticles and related agents such as dendrimers as novel antithrombotics.
- Published
- 2021
- Full Text
- View/download PDF
132. Förster Resonance Energy Transfer Nanoplatform Based on Recognition-Induced Fusion/Fission of DNA Mixed Micelles for Nucleic Acid Sensing.
- Author
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Vafaei S, Allabush F, Tabaei SR, Male L, Dafforn TR, Tucker JHR, and Mendes PM
- Subjects
- DNA, Fluorescence Resonance Energy Transfer, Micelles, Nanostructures, Nucleic Acids
- Abstract
The dynamic nature of micellar nanostructures is employed to form a self-assembled Förster resonance energy transfer (FRET) nanoplatform for enhanced sensing of DNA. The platform consists of lipid oligonucleotide FRET probes incorporated into micellar scaffolds, where single recognition events result in fusion and fission of DNA mixed micelles, triggering the fluorescence response of multiple rather than a single FRET pair. In comparison to conventional FRET substrates where a single donor interacts with a single acceptor, the micellar multiplex FRET system showed ∼20- and ∼3-fold enhancements in the limit of detection and FRET efficiency, respectively. This supramolecular signal amplification approach could potentially be used to improve FRET-based diagnostic assays of nucleic acid and non-DNA based targets.
- Published
- 2021
- Full Text
- View/download PDF
133. Direct Immobilization of Engineered Nanobodies on Gold Sensors.
- Author
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Simões B, Guedens WJ, Keene C, Kubiak-Ossowska K, Mulheran P, Kotowska AM, Scurr DJ, Alexander MR, Broisat A, Johnson S, Muyldermans S, Devoogdt N, Adriaensens P, and Mendes PM
- Subjects
- Molecular Dynamics Simulation, Protein Conformation, Antibodies, Immobilized chemistry, Antibodies, Immobilized genetics, Biosensing Techniques methods, Gold chemistry, Protein Engineering, Single-Domain Antibodies chemistry, Single-Domain Antibodies genetics
- Abstract
Single-domain antibodies, known as nanobodies, have great potential as biorecognition elements for sensors because of their small size, affinity, specificity, and robustness. However, facile and efficient methods of nanobody immobilization are sought that retain their maximum functionality. Herein, we describe the direct immobilization of nanobodies on gold sensors by exploiting a modified cysteine strategically positioned at the C-terminal end of the nanobody. The experimental data based on secondary ion mass spectrometry, circular dichroism, and surface plasmon resonance, taken together with a detailed computational work (molecular dynamics simulations), support the formation of stable and well-oriented nanobody monolayers. Furthermore, the nanobody structure and activity is preserved, wherein the nanobody is immobilized at a high density (approximately 1 nanobody per 13 nm
2 ). The strategy for the spontaneous nanobody self-assembly is simple and effective and possesses exceptional potential to be used in numerous sensing platforms, ranging from clinical diagnosis to environmental monitoring.- Published
- 2021
- Full Text
- View/download PDF
134. Protein identification by 3D OrbiSIMS to facilitate in situ imaging and depth profiling.
- Author
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Kotowska AM, Trindade GF, Mendes PM, Williams PM, Aylott JW, Shard AG, Alexander MR, and Scurr DJ
- Subjects
- Argon chemistry, Humans, Molecular Imaging methods, Peptide Fragments analysis, Peptide Fragments chemistry, Peptide Fragments metabolism, Proteins metabolism, Proteomics instrumentation, Skin chemistry, Spectrometry, Mass, Secondary Ion instrumentation, Workflow, Proteins analysis, Proteomics methods, Skin metabolism, Spectrometry, Mass, Secondary Ion methods
- Abstract
Label-free protein characterization at surfaces is commonly achieved using digestion and/or matrix application prior to mass spectrometry. We report the assignment of undigested proteins at surfaces in situ using secondary ion mass spectrometry (SIMS). Ballistic fragmentation of proteins induced by a gas cluster ion beam (GCIB) leads to peptide cleavage producing fragments for subsequent Orbitrap
TM analysis. In this work we annotate 16 example proteins (up to 272 kDa) by de novo peptide sequencing and illustrate the advantages of this approach by characterizing a protein monolayer biochip and the depth distribution of proteins in human skin.- Published
- 2020
- Full Text
- View/download PDF
135. Platelet aggregation induced by polystyrene and platinum nanoparticles is dependent on surface area.
- Author
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Zia F, Kendall M, Watson SP, and Mendes PM
- Abstract
Nanoparticles are key components underlying recent technological advances in various industrial and medical fields, and thus understanding their mode of interaction with biological systems is essential. However, while several nanoparticle systems have been shown to interact with blood platelets, many questions remain concerning the mechanisms of platelet activation and the role that the physicochemical properties of nanoparticles play in inducing platelet aggregation. Here, using negatively charged polystyrene nanoparticles with sizes of 25, 50, 119, 151, 201 nm and negatively charged platinum nanoparticles with sizes of 7 and 73 nm, we show that it is not the size of the nanoparticles but rather the nanoparticle surface area that is critical in mediating the effects on platelet activation. The nanoparticles stimulate platelet aggregation through passive (agglutination) and activation of integrin αIIbβ3 through a pathway regulated by Src and Syk tyrosine kinase.
- Published
- 2018
- Full Text
- View/download PDF
136. Protein nanoarrays for high-resolution patterning of bacteria on gold surfaces.
- Author
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Costello C, Kreft JU, Thomas CM, and Mendes PM
- Subjects
- Bacterial Proteins chemistry, Bacterial Proteins metabolism, Cell Communication, Cells, Immobilized cytology, Dimethylpolysiloxanes chemistry, Mannose-Binding Lectin chemistry, Mannose-Binding Lectin metabolism, Mannosides chemistry, Mannosides metabolism, Printing, Surface Properties, Culture Techniques instrumentation, Escherichia coli cytology, Gold chemistry, Nanotechnology instrumentation, Protein Array Analysis instrumentation
- Abstract
In recent years, the majority of research on surface patterning, as a means of precisely controlling cell -positioning and adhesion on surfaces, has focused on eukaryotic cells. Such research has led to new insights into cell biology, advances in tissue engineering, and cell motility. In contrast, considerably less work has been reported on tightly controlled patterning of bacteria, despite its potential in a wide variety of applications, including fabrication of in vitro model systems for studies of bacterial processes, such as quorum sensing and horizontal gene transfer. This is partly due to their small size - often 1-3 μm or less. To study these processes, microscale and nanoscale engineered material surfaces must be developed to create in vitro bacteria arrays, which can allow valuable insights into natural systems such as the soil or the human gut, and are often complex and spatially structured habitats. Here, we outline a protocol to create defined patterns of bacteria to study such systems at the single cell level that is based on the formation of protein nanoarrays on mannoside-terminated self-assembled monolayers via nanocontact printing and the subsequent deposition of bacteria from solution on the unpatterned regions of the mannoside-terminated substrate.
- Published
- 2011
- Full Text
- View/download PDF
137. Spatially controlled assembly of nanomaterials at the nanoscale.
- Author
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Parthasarathy P, Mendes PM, Schopf E, Preece JA, Stoddart F, and Chen Y
- Abstract
A molecular monolayer of 4-nitrothiophenol ongold electrodes is reduced electrochemically when its nitro groups are converted into amino groups by potentiometric scans. The protonated amine with its NH3+ functions can be employed to induce the self-assembly of gold nanoparticles at the surface of the electrodes. The electrochemical reaction and the induced assembly process can be controlled at the nanoscale level on the electrodes with a high degree of selectivity. The technology opens up the possibility of fabricating complex multi-nanomaterial nanostructures on the basis of a two-step electrochemical assembly process.
- Published
- 2009
- Full Text
- View/download PDF
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