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The precise assembly of tissues and organs relies on spatiotemporal regulation of gene expression to coordinate the collective behavior of cells. In Drosophila embryos, the midgut musculature is formed through collective migration of caudal visceral mesoderm (CVM) cells, but how gene expression changes as cells migrate is not well understood. Here, we have focused on ten genes expressed in the CVM and the cis-regulatory sequences controlling their expression. Although some genes are continuously expressed, others are expressed only early or late during migration. Late expression relates to cell cycle progression, as driving string/Cdc25 causes earlier division of CVM cells and accelerates the transition to late gene expression. In particular, we found that the cell cycle effector transcription factor E2F1 is a required input for the late geneCG5080. Furthermore, whereas late genes are broadly expressed in all CVM cells, early gene transcripts are polarized to the anterior or posterior ends of themigrating collective. We show this polarization requires transcription factors Snail, Zfh1 and Dorsocross. Collectively, these results identify two sequential gene expression programs bridged by cell division that support long-distance directional migration of CVM cells. [ABSTRACT FROM AUTHOR]

Active nematics are driven, non-equilibrium systems relevant to biological processes including tissue mechanics and morphogenesis, and to active metamaterials in general. We study the three-dimensional spontaneous flow transition of an active nematic in an infinite slab geometry using a combination of numerics and analytics. We show that it is determined by the interplay of two eigenmodes – called S- and D-mode – that are unstable at the same activity threshold and spontaneously breaks both rotational symmetry and chiral symmetry. The onset of the unstable modes is described by a non-Hermitian integro-differential operator, which we determine their exponential growth rates from using perturbation theory. The S-mode is the fastest growing. After it reaches a finite amplitude, the growth of the D-mode is anisotropic, being promoted perpendicular to the S-mode and suppressed parallel to it, forming a steady state with a full three-dimensional director field and a well-defined chirality. Lastly, we derive a model of the leading-order time evolution of the system close to the activity threshold. Active nematics are driven, non-equilibrium systems relevant to tissue mechanics and morphogenesis in biology, and with prospects as active metamaterials. The authors study the three-dimensional spontaneous flow transition with normal anchoring and show that it involves both chiral and rotational symmetry breaking, resulting in a fully three-dimensional flow with a twisted director field. [ABSTRACT FROM AUTHOR]

Introduction: In the acute phase after a spinal cord injury or disease (SCI/D), various therapeutic assessments and interventions are applied with the goal of restoring structures, preventing complications and preparing the patient as best as possible for further activity and finally participation. The goal was to identify and evaluate the available evidence on assessments and interventions for body functions and structures to prepare adults with acute spinal cord SCI/D for activity and participation during the first 14 days. Methods: A scoping review was conducted. The search was performed on June 19, 2023 using the databases PubMed, PEDro, Cochrane library and Embase. These were screened for studies including patients with acute SCI/D and physiotherapeutic or occupational therapy assessments and interventions. Only studies in English or German published between 2012 and 2023 were included. Results: Twelve publications met the inclusion criteria, namely three systematic reviews, two randomized controlled trials, two observational studies and five clinical practice guidelines. Assessments as the Spinal Cord Independence Measure, as well as exercises such as daily passive mobilization of body structures against contractures were used in the entire population, while others were only applied in subgroups of SCI/D such as the Graded Redefined Assessment of Strength, Sensation and Prehension or functional electrical stimulation with and without additional movements. The methodological quality of the studies found varied greatly from good to very poor. Discussion: Heterogeneity in research design and study population as well as lack of high-quality studies do not cover the standard of clinical management in the acute phase and further comprehensive research is needed. [ABSTRACT FROM AUTHOR]

Fibronectin (FN) is a major extracellular matrix (ECM) protein involved in a wide range of physiological processes, including cell migration. These FN-mediated cell migration events are essential to processes such as wound repair, cancer metastasis, and vertebrate development. This review synthesizes mainly current literature to provide an overview of the mechanoregulatory role of FN-mediated cell migration. Background on FN structure and role in mechanotransduction is provided. Cell migration concepts are introduced, including the general cell migration mechanism and classification of cell migration types. Then, FN-mediated events that directly affect cell migration are explored. Finally, a focus on FN in tissue repair and cancer migration is presented, as these topics represent a large amount of current research. [ABSTRACT FROM AUTHOR]

The extracellular matrix (ECM) is a highly complex structure through which biochemical and mechanical signals are transmitted. In processes of cell migration, the ECM also acts as a scaffold, providing structural support to cells as well as points of potential attachment. Although the ECM is a well-studied structure, its role inmany biological processes remains difficult to investigate comprehensively due to its complexity and structural variation within an organism. In tandem with experiments, mathematical models are helpful in refining and testing hypotheses, generating predictions, and exploring conditions outside the scope of experiments. Such models can be combined and calibrated with in vivo and in vitro data to identify critical cell-ECM interactions that drive developmental and homeostatic processes, or the progression of diseases. In this review, we focus on mathematical and computational models of the ECM in processes such as cell migration including cancer metastasis, and in tissue structure and morphogenesis. By highlighting the predictive power of these models, we aim to help bridge the gap between experimental and computational approaches to studying the ECM and to provide guidance on selecting an appropriate model framework to complement corresponding experimental studies. [ABSTRACT FROM AUTHOR]

In addition to aquaporin (AQP) classes AQP1, AQP4 and AQP9 known to be expressed in mammalian brain, our recent transcriptomic analyses identified AQP0 and AQP11 in human cortex and hippocampus at levels correlated with age and Alzheimer's disease (AD) status; however, protein localization remained unknown. Roles of AQP0 and AQP11 in transporting hydrogen peroxide (H2O2) in lens and kidney prompted our hypothesis that up-regulation in brain might similarly be protective. Established cell lines for astroglia (1321N1) and neurons (SHSY5Y, differentiated with retinoic acid) were used to monitor changes in transcript levels for human AQPs (AQP0 to AQP12) in response to inflammation (simulated with 10-100 ng/ml lipopolysaccharide [LPS], 24 h), and hypoxia (5min N2, followed by 0 to 24 h normoxia). AQP transcripts up-regulated in both 1321N1 and SHSY5Y included AQP0, AQP1 and AQP11. Immunocytochemistry in 1321N1 cells confirmed protein expression for AQP0 and AQP11 in plasma membrane and endoplasmic reticulum; AQP11 increased 10-fold after LPS and AQP0 increased 0.3-fold. In SHSY5Y cells, AQP0 expression increased 0.2-fold after 24 h LPS; AQP11 showed no appreciable change. Proposed peroxiporin roles were tested using melondialdehyde (MDA) assays to quantify lipid peroxidation levels after brief H2O2. Boosting peroxiporin expression by LPS pretreatment lowered subsequent H2O2-induced MDA responses (~50%) compared with controls; conversely small interfering RNA knockdown of AQP0 in 1321N1 increased lipid peroxidation (~17%) after H2O2, with a similar trend for AQP11 siRNA. Interventions that increase native brain peroxiporin activity are promising as new approaches to mitigate damage caused by aging and neurodegeneration. [ABSTRACT FROM AUTHOR]

Quantitative analysis of rock samples using laser-induced breakdown spectroscopy (LIBS) is a challenging task due to the significant differences in spectra between pressed pellet samples and rock samples, with pressed pellet samples usually exhibiting stronger spectral lines. The predictive ability of LIBS quantitative analysis models for rock samples is poorer compared to that for pressed pellet samples, and quantitative analysis models constructed using pressed pellet samples cannot be directly applied to predict the composition of rock samples. To address the issue, a quantitative analysis method for raw rocks based on feature transfer learning using transfer component analysis (TCA) is proposed in this paper. By establishing a feature mapping relationship between pressed pellet samples and rock samples, the differences between data features are reduced, thus enabling the training of a more quantitative analysis model. The transfer learning was introduced into a multivariate regression machine learning model for training using pressed pellet samples, which successfully addresses the problem of prediction accuracy of rock sample element contents. In this model, all data were mapped to a high-dimensional reproducing kernel Hilbert space, and a subset of the most similar features was selected to train the quantitative analysis model. Upon testing the model with independent rock samples, the difference between the predicted and true values was significantly reduced. The model yielded a root mean square error of prediction (RMSEP) of 3.7131, 1.0185, 0.2985, 13.0439, and 1.5450 for Si, Al, Fe, Ca, and Mg in rock samples, respectively. These results indicate that LIBS coupled with the transfer learning algorithm can effectively eliminate the differences between the spectra of the pressed pellet and the raw rock and provide another idea for in situ LIBS detection. [ABSTRACT FROM AUTHOR]

The formation of complex structures, such as the craniofacial skeleton, requires precise and intricate two-way signalling between populations of cells of different embryonic origins. For example, the lower jaw, or mandible, arises from cranial neural crest cells (CNCCs) in the mandibular portion of the first branchial arch (mdBA1) of the embryo, and its development is regulated by signals from the ectoderm and cranial mesoderm (CM) within this structure. The molecular mechanisms underlying CM cell influence on CNCC development in the mdBA1 remain poorly defined. Herein we identified the receptor Neogenin as a key regulator of craniofacial development. We found that ablation of Neogenin expression via gene-targeting resulted in several craniofacial skeletal defects, including reduced size of the CNCC-derived mandible. Loss of Neogenin did not affect the formation of the mdBA1 CM core but resulted in altered Bmp4 and Fgf8 expression, increased apoptosis, and reduced osteoblast differentiation in the mdBA1 mesenchyme. Reduced BMP signalling in the mdBA1 of Neogenin mutant embryos was associated with alterations in the gene regulatory network, including decreased expression of transcription factors of the Hand, Msx, and Alx families, which play key roles in the patterning and outgrowth of the mdBA1. Tissue-specific Neogenin loss-of-function studies revealed that Neogenin expression in mesodermal cells contributes to mandible formation. Thus, our results identify Neogenin as a novel regulator of craniofacial skeletal formation and demonstrates it impinges on CNCC development via a non-cell autonomous mechanism. [ABSTRACT FROM AUTHOR]

Grain size analysis, geochemistry, and petrography of sandstones of the Ilaro Formation exposed at the Ajegunle area were investigated to infer provenance, transportation history, tectonic setting, paleoenvironment, and degree of palaeoweathering of the sediments. Selected sandstones were analyzed, and the major, trace, and rare earth elements were determined using Inductively Coupled Plasma Mass Spectrometry (ICP-MS). Results from the granulometric analysis showed that sandstones were deposited in fluvial conditions. The sandstones exhibit a coarse-grained texture, displaying poor sorting and being texturally immature. The petrographic analysis indicated that quartz was predominant, whereas opaque minerals, muscovite, and ferruginous ground mass were present in smaller quantities. The sandstones can be geochemically classified as arkose and subarenite. The sandstones have an average composition of SiO2 (82.87%) and Al2O3 (9.49%), while K2O, Na2O, MgO, CaO, and P2O5 have <1% each. The elevated Al2O3 content is associated with the lithic fragment composition, whereas the low concentrations of MgO (mean 0.03%), Na2O (mean 0.008%), and K2O (mean 0.04%) suggest chemical destruction in an oxidizing environment. The angularity of the grains indicated a short transportation history very close to the provenance. Bivariate and discriminant plots from major elements and trace elements suggest the sandstones were non-marine and sourced from intermediate rocks. The sandstones were deposited in an oxic-dyoxic condition under a humid climate and passive or active continental margins. The average values of the weathering indices indicate an intense degree of chemical weathering. [ABSTRACT FROM AUTHOR]

As an important elemental analysis method, laser-induced breakdown spectroscopy (LIBS) enables the qualitative and quantitative determination of the compositions of geological targets on Mars. In order to analyze the chemical compositions of Martian rocks and soils at Gale crater, the ChemCam team built a LIBS spectral library of 408 geological standards using a ChemCam's ground replica under a simulated Martian atmosphere. However, the lack of spectra data with component labels makes it difficult to establish a composition inversion model for predicting the collected spectra. The Mars Surface Composition Detector (MarSCoDe) carried by China's Mars rover, Zhurong, also employs LIBS technology and has successfully conducted related composition detection work. Therefore, this paper proposes a domain-adaptive fully connected neural network (DAFCN) capable of transferring prior knowledge between ChemCam and SDU-LIBS (a LIBS system developed by Shandong University). The model extracts the features of the source domain and target domain through a three-layer fully connected network and uses a domain adaptation function to reduce the difference in feature distribution between the source domain and target domain. Experimental results show that the proposed method is superior to the traditional method without migration. Further, we tried this method to establish the connection between MarSCoDe and other LIBS devices, and then quantitatively analyzed the spectra collected by MarSCoDe. [ABSTRACT FROM AUTHOR]

Context/objective: People with spinal cord injury (SCI) are the deciding force behind the rehabilitation program to improve their quality of life (QoL) based on their personal preferences. Here we aimed to determine the preferences perceived most vital by Saudi SCI population to improve their QoL, and explore if these preferences are affected by gender, education, and duration, level, or extent of injury., Design: Participants ranked seven priorities of bodily functions as Rank I-VII with "I" being "Most important," and "VII" being "Least important.", Setting: Inpatient rehabilitation facility., Participants: 120 participants (>18 years of age) of either sex with SCI without polytrauma, acquired brain injury, neurodegenerative disease, and dementia., Outcome Measures: Ranking scale of seven priorities of bodily functions as Rank I-VII with "I" being "Most important," and "VII" being "Least important.", Results: Of 101 individuals (mean age: 35.2 ± 14.8 years) finally included, 70.3% were males, 66.3% had onset of SCI since ≥ 3 years, 48.5% had a complete injury, and 75% had paraplegia. Most (26.7%) participants ranked walking as the first priority followed by hand/arm function (20.8%). Sexual function was the least important priority (39.6%). Hand/arm function was significantly more important for individuals with tetraplegia (p < 0.001). Trunk strength and balance was significantly less important for individuals with complete injury (p = 0.037). Participants with the onset of injury < 3 years and a complete injury reported bladder/bowel function as significantly more important (p = 0.011). Walking was significantly more important for people with incomplete injury and for people with injury duration ≥ 3 years (p = 0.022, p = 0.002 respectively)., Conclusion: The top priority in our sample of Saudi people with SCI was walking followed by hand/arm function while the least desired function was regaining sexual function. Walking was a prioritized function for people with injury duration ≥ 3 years and people with a complete injury while hand/arm function was highly prioritized by people with tetraplegia., (© 2024. The Author(s), under exclusive licence to International Spinal Cord Society.)

Fishbone drilling (FbD) involves drilling multiple micro-holes branching out in various directions from the primary vertical or deviated wellbore. FbD is similar to multilateral micro-hole drilling and can be employed to boost hydrocarbon production in naturally fractured formations or during refracturing operations by connecting existing natural fractures. Key design elements in fishbones include determining the number, length, and spacing between the branches, and the angle at which the branches deviate from the main borehole. Fishbone wells have emerged as a promising technology for improving well performance and reducing environmental impact. In this paper, we present a comprehensive review of the different applications of fishbone wells in conventional and renewable energy systems. We discuss the potential of fishbone wells for enhanced oil and gas recovery, as well as their application in unconventional resources such as coal bed methane. Moreover, we examine the feasibility of fishbone wells in renewable energy systems, such as geothermal energy and carbon capture, utilization, and storage (CCUS). We highlight the various benefits of fishbone wells, including reduced carbon footprint, enhanced efficiency, and increased sustainability. Finally, we discuss the challenges and limitations associated with fishbone wells in different energy systems. This review provides a comprehensive overview of the potential and challenges of fishbone wells in reducing carbon footprint and improving well performance in a wide range of energy systems. [ABSTRACT FROM AUTHOR]

Anthropogenic alterations to river flow could have repercussions for flow-dependent species downstream but few studies account for these dynamic relationships or quantify impacts of altered river flow. Scylla serrata— a widely distributed portunid crab—was used as an example of a flow-dependent species to model impacts of altered flow on species abundance and catch. Crab population dynamics were modelled across a large semi-enclosed tropical sea in northern Australia. Environmental drivers, primarily river flow, but also temperature and the Southern Oscillation Index were linked to crab dynamics to explain variability in historical catches. Catch and abundance could then be predicted under altered flow scenarios. River flow significantly improved the ability to explain historical catches for some regions but not all, and the strength of this relationship varied across catchments. Altered flows had negligible effects for perennial rivers but for ephemeral and temporally variable rivers, predicted decreases in abundance and catch ranged from 36 to 46% on average. Our modelling approach showcases a way to dynamically and rigorously quantify impacts of altered river flow on a key species with potential to help inform natural resource management, including policy decisions on the timing, quantity, and method of water removed from rivers. [ABSTRACT FROM AUTHOR]

The combined analysis of geological targets by complementary spectroscopic techniques could enhance the characterization of the mineral phases found on Mars. This is indeed the case with the SuperCam instrument onboard the Perseverance rover. In this framework, the present study seeks to evaluate and compare multiple machine learning techniques for the characterization of carbonate minerals based on Raman‐LIBS (Laser‐Induced Breakdown Spectroscopy) spectroscopic data. To do so, a Ca‐Mg prediction curve was created by mixing hydromagnesite and calcite at different concentration ratios. After their characterization by Raman and LIBS spectroscopy, different multivariable machine learning (Gaussian process regression, support vector machines, ensembles of trees, and artificial neural networks) were used to predict the concentration ratio of each sample from their respective datasets. The results obtained by separately analyzing Raman and LIBS data were then compared to those obtained by combining them. By comparing their performance, this work demonstrates that mineral discrimination based on Gaussian and ensemble methods optimized the combine of Raman‐LIBS dataset outperformed those ensured by Raman and LIBS data alone. This demonstrated that the fusion of data combination and machine learning is a promising approach to optimize the analysis of spectroscopic data returned from Mars. [ABSTRACT FROM AUTHOR]

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Passive acoustic monitoring is widely used for detection and localization of marine mammals. Typically, pressure sensors are used, although several studies utilized acoustic vector sensors (AVSs), that measure acoustic pressure and particle velocity and can estimate azimuths to acoustic sources. The AVSs can localize sources using a reduced number of sensors and do not require precise time synchronization between sensors. However, when multiple animals are calling concurrently, automated tracking of individual sources still poses a challenge, and manual methods are typically employed to link together sequences of measurements from a given source. This paper extends the method previously reported by Tenorio-Hallé, Thode, Lammers, Conrad, and Kim [J. Acoust. Soc. Am. 151(1), 126–137 (2022)] by employing and comparing two fully-automated approaches for azimuthal tracking based on the AVS data. One approach is based on random finite set statistics and the other on message passing algorithms, but both approaches utilize the underlying Bayesian statistical framework. The proposed methods are tested on several days of AVS data obtained off the coast of Maui and results show that both approaches successfully and efficiently track multiple singing humpback whales. The proposed methods thus made it possible to develop a fully-automated AVS tracking approach applicable to all species of baleen whales. [ABSTRACT FROM AUTHOR]

By 2100, greenhouse gases are predicted to reduce ozone and cloud cover over the tropics causing increased exposure of organisms to harmful ultraviolet‐B radiation (UVBR). UVBR damages DNA and is an important modulator of immune function and disease susceptibility in humans and other vertebrates. The effect of UVBR on invertebrate immune function is largely unknown, but UVBR together with ultraviolet‐A radiation impairs an insect immune response that utilizes melanin, a pigment that also protects against UVBR‐induced DNA damage. If UVBR weakens insect immunity, then it may make insect disease vectors more susceptible to infection with pathogens of socioeconomic and public health importance. In the tropics, where UVBR is predicted to increase, the mosquito‐borne dengue virus (DENV), is prevalent and a growing threat to humans. We therefore examined the effect of UVBR on the mosquito Aedes aegypti, the primary vector for DENV, to better understand the potential implications of increased tropical UVBR for mosquito‐borne disease risk. We found that exposure to a UVBR dose that caused significant larval mortality approximately doubled the probability that surviving females would become infected with DENV, despite this UVBR dose having no effect on the expression of an effector gene involved in antiviral immunity. We also found that females exposed to a lower UVBR dose were more likely to have low fecundity even though this UVBR dose had no effect on larval size or activity, pupal cuticular melanin content, or adult mass, metabolic rate, or flight capacity. We conclude that future increases in tropical UVBR associated with anthropogenic global change may have the benefit of reducing mosquito‐borne disease risk for humans by reducing mosquito fitness, but this benefit may be eroded if it also makes mosquitoes more likely to be infected with deadly pathogens. [ABSTRACT FROM AUTHOR]

During embryonic development, 2 populations of multipotent stem cells, cranial neural crest cells (NCCs) and epibranchial placode cells (PCs), are anatomically adjacent to each other. The coordinated migration of NCCs and PCs plays a major role in the morphogenesis of craniofacial skeletons and cranial nerves. It is known that ethanol-induced dysfunction of NCCs and PCs is a key contributor to the defects of craniofacial skeletons and cranial nerves implicated in fetal alcohol spectrum disorder (FASD). However, how ethanol disrupts the coordinated interaction between NCCs and PCs was not elucidated. To fill in this gap, we established a well-designed cell coculture system to investigate the reciprocal interaction between human NCCs (hNCCs) and human PCs (hPCs), and also monitored the migration behavior of NCCs and PCs in zebrafish embryos. We found that ethanol exposure resulted in a disruption of coordinated hNCCs-hPCs interaction, as well as in zebrafish embryos. Treating hNCCs-hPCs with exosomes derived from ethanol-exposed hNCCs (ExoEtOH) mimicked ethanol-induced impairment of hNCCs-hPCs interaction. We also observed that SDF1, a chemoattractant, was downregulated in ethanol-treated hPCs and zebrafish embryos. Meanwhile, miR-126 level in ExoEtOH was significantly higher than that in control exosomes (ExoCon). We further validated that ExoEtOH-encapsulated miR-126 from hNCCs can be transferred to hPCs to suppress SDF1 expression in hPCs. Knockdown of SDF1 replicated ethanol-induced abnormalities either in vitro or in zebrafish embryos. On the contrary, overexpression of SDF1 or inhibiting miR-126 strongly rescued ethanol-induced impairment of hNCCs-hPCs interaction and developmental defects. [ABSTRACT FROM AUTHOR]

Twenty-nine mental health support workers took part in an online-survey consisting of a vignette and scenarios to elicit information regarding their recovery perceptions and positive-risk taking approaches related to service-users with dual-diagnoses of mental illness and substance use disorder. Reflexive thematic analysis was used to analyze the survey-responses. Although the participants emphasized some aspects aligning with the recommended "recovery-oriented practice" approach, there was an overemphasis on reduced substance-use, aversive and overprotective approaches to positive risk-taking and a lack of emphasis on hope and the service-users' strengths and abilities. It was concluded that there is a continuing need to implement recovery-oriented practice within mental health services. [ABSTRACT FROM AUTHOR]

The evolution of a unique craniofacial complex in vertebrates made possible new ways of breathing, eating, communicating and sensing the environment. The head and face develop through interactions of all three germ layers, the endoderm, ectoderm and mesoderm, as well as the so-called fourth germ layer, the cranial neural crest. Over a century of experimental embryology and genetics have revealed an incredible diversity of cell types derived from each germ layer, signaling pathways and genes that coordinate craniofacial development, and how changes to these underlie human disease and vertebrate evolution. Yet for many diseases and congenital anomalies, we have an incomplete picture of the causative genomic changes, in particular how alterations to the non-coding genome might affect craniofacial gene expression. Emerging genomics and single-cell technologies provide an opportunity to obtain a more holistic view of the genes and gene regulatory elements orchestrating craniofacial development across vertebrates. These single-cell studies generate novel hypotheses that can be experimentally validated in vivo. In this Review, we highlight recent advances in single-cell studies of diverse craniofacial structures, as well as potential pitfalls and the need for extensive in vivo validation. We discuss how these studies inform the developmental sources and regulation of head structures, bringing new insights into the etiology of structural birth anomalies that affect the vertebrate head. [ABSTRACT FROM AUTHOR]

Background: We investigated the personal philosophies of eight persons with a tetraplegic condition (four male, four female), all living in Sweden with a chronic spinal cord injury (SCI) and all reporting a good life. Our purpose was to discover if there is a philosophical mindset that may play a role in living a good life with a traumatic SCI. Methods: Two rounds of in‐depth qualitative interviews were performed by the same interviewer, a philosophical practitioner by training (de Miranda). The second round systematically covered the following elements: bodily sense, sense of self, sense of belonging, sense of the possible, sense of purpose and philosophical sense. This six‐step method developed by de Miranda is called SMILE_PH, an acronym for Sense‐Making Interviews Looking at Elements of Philosophical Health. Results: All the interviewees, as a consequence of their trauma, reported having gone through a reinvention of themselves which implied questioning the meaning and purpose of their life in particular and life in general. A philosophical rather than realistic sense of the possible was abstracted toward teleological growth. All interviewees developed a sense of purpose based on self‐interested altruism and solidarity with disabled peers. Conclusions: To reinvent a good life with SCI, in addition to physical training and willpower, one needs to consider philosophical questions about the self and life, what Kant called the cosmic interests of reason: What may I hope? What must I do? What can I know? Our results indicate that we should, in the future, explore what the philosophical health approach may bring to rehabilitation processes in the months or years that follow the trauma. [ABSTRACT FROM AUTHOR]

Bacteria are well known to provide heterologous immunity against viral infections through various mechanisms including the induction of innate trained immunity and adaptive cross-reactive immunity. Cross-reactive immunity from bacteria to viruses is responsible for long-term protection and yet its role has been downplayed due the difficulty of determining antigen-specific responses. Here, we carried out a systematic evaluation of the potential cross-reactive immunity from selected bacteria known to induce heterologous immunity against various viruses causing recurrent respiratory infections. The bacteria selected in this work were Bacillus Calmette Guerin and those included in the poly-bacterial preparation MV130: Streptococcus pneumoniae, Staphylococcus aureus, Staphylococcus epidermidis, Klebsiella pneumoniae, Branhamella catarrhalis and Haemophilus influenzae. The virus included influenza A and B viruses, human rhinovirus A, B and C, respiratory syncytial virus A and B and severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Through BLAST searches, we first identified the shared peptidome space (identity ≥ 80%, in at least 8 residues) between bacteria and viruses, and subsequently predicted T and B cell epitopes within shared peptides. Interestingly, the potential epitope spaces shared between bacteria in MV130 and viruses are non-overlapping. Hence, combining diverse bacteria can enhance cross-reactive immunity. We next analyzed in detail the cross-reactive T and B cell epitopes between MV130 and influenza A virus. We found that MV130 contains numerous cross-reactive T cell epitopes with high population protection coverage and potentially neutralizing B cell epitopes recognizing hemagglutinin and matrix protein 2. These results contribute to explain the immune enhancing properties of MV130 observed in the clinic against respiratory viral infections. [ABSTRACT FROM AUTHOR]

We report in this study on the isolation and expansion of neural crest stem cells (NCSCs) from the epithelium of oral mucosa (OM) using reagents that are GMP-certified and FDA-approved for clinical use. Characterization analysis showed that the levels of keratins K2, K6C, K4, K13, K31, and K15—specific to OM epithelial cells—were significantly lower in the experimental NCSCs. While SOX10 was decreased with no statistically significant difference, the earliest neural crest specifier genes SNAI1/2, Ap2a, Ap2c, SOX9, SOX30, Pax3, and Twist1 showed a trend in increased expression in NCSCs. In addition, proteins of Oct4, Nestin and Noth1 were found to be greatly expressed, confirming NCSC multipotency. In conclusion, our study showed that the epithelium of OM contains NCSCs that can be isolated and expanded with clinical-grade reagents to supply the demand for multipotent cells required for clinical applications in regenerative medicine. Supported by Emmaus Medical Inc. [ABSTRACT FROM AUTHOR]

Endometrial scratching (ES) has been widely used in assisted reproductive technology to possibly improve pregnancy rates, but its exact mechanism is still not understood or investigated, and its benefits are controversially discussed. Hypothetically, ES may trigger a local immune response, leading to an improved endometrial receptivity. So far, it has been shown that ES affects the gene expression of cytokines, growth factors, and adhesive proteins, potentially modulating inflammatory pathways and adhesion molecule expression. Our pilot study applying proteomic analysis reveals that ES probably has an impact on the proteins involved in immune response pathways and cytoskeleton formation, which could potentially increase endometrial receptivity. Specifically, proteins that are involved in the immune response and cytoskeleton regulation showed a trend toward higher abundance after the first ES. On the other hand, proteins with a decreasing abundance after the first ES play roles in the regulation of the actin cytoskeleton and cellular processes such as intracellular transport, apoptosis, and autophagy. These trends in protein changes suggest that ES may affect endometrial tissue stiffness and extracellular matrix remodeling, potentially enhancing the embryos' implantation. To our knowledge, this pilot study provides, for the first time, data investigating potential changes in the endometrium due to the scratching procedure that might explain its possible benefit for patients in infertility treatment. Furthermore, the proteome of a group of patients suffering from repeated implantation failure was compared to that of the fertile group in order to transfer the basic science to clinical routine and application. [ABSTRACT FROM AUTHOR]

The dlx genes encode transcription factors that establish a proximal–distal polarity within neural crest cells to bestow a regional identity during craniofacial development. The expression regions of dlx paralogs are overlapping yet distinct within the zebrafish pharyngeal arches and may also be involved in progressive morphologic changes and organization of chondrocytes of the face. However, how each dlx paralog of dlx1a, dlx2a, dlx5a and dlx6a affects craniofacial development is still largely unknown. We report here that the average lengths of the Meckel's, palatoquadrate and ceratohyal cartilages in different dlx mutants were altered. Mutants for dlx5a−/− and dlx5i6−/−, where the entire dlx5a/dlx6a locus was deleted, have the shortest lengths for all three structures at 5 days post fertilization (dpf). This phenotype was also observed in 14 dpf larvae. Loss of dlx5i6 also resulted in increased proliferation of neural crest cells and expression of chondrogenic markers. Additionally, altered expression and function of non-canonical Wnt signaling were observed in these mutants suggesting a novel interaction between dlx5i6 locus and non-canonical Wnt pathway regulating ventral cartilage morphogenesis. [ABSTRACT FROM AUTHOR]

The 1970s saw incarcerated laborers engage in an unprecedented battle to secure recognition, rights, and protections. This article traces the rise of the Prisoners Union, the largest and most prominent organization of its sort, as it endeavored to elevate the standing of captive labor. Through qualitative analysis of archival materials, this work unpacks penal laborers' classification struggles aimed at advancing status in the penal field and rejoining the ranks of the working class. Investigating this movement's successes and failures enhances empirical knowledge of prison organizing as well as theoretical understandings of classification struggles, and helps contextualize historic penological developments. [ABSTRACT FROM AUTHOR]

Background: To explore the pathogenesis of microtia, in this study, the different concentrations of mycophenolate mofetil (MMF) exposure on the development of rat embryonic and fetal ears, in order to establish a drug‐induced microtia model, and provide a basis for further exploring the pathogenesis of microtia. Methods: The pregnant rat model was established in this study, 56 pregnant SD rats were randomly divided into 4 groups: control group and MMF (50, 100, and 200 mg/kg) group. Solutions were administered to the rats by oral gavage at gestation day (GD) 9 and GD 10 8:00 a.m, once a day. On GD 10.5 and GD 14.5, embryos were evaluated for neural crest development. On GD 20.5, fetuses were evaluated for overall survival and development with particular focus on ear development via morphologic, skeletal, and histologic investigation. Some animals were allowed to deliver their litters and offspring were evaluated on postnatal day 18 for ear development. Results: A total of 56 pregnant rats, 14 in each group, were included in the study. As a result, depending on MMF dose increase, in experimental groups, it was determined that the statistically significant the development of the first and second branchial arches and derived tissues of the embryo, overall survival, ear development, and length and weight of fetuses. Imaging of MMF groups revealed statistically significant differences in the development of the skull and auditory vesicles of MMF treated fetuses. Histologically, MMF affected the proliferation and differentiation of chondrocytes and the expression of type II collagen. Conclusions: Mycophenolate mofetil can lead to the hypoplasia of rat embryos, fetuses, and auricle in a dose‐dependent. MMF may affect the migration and proliferation of cranial neural crest cells, and then lead to microtia. MMF may induce the establishment of an animal model of microtia. [ABSTRACT FROM AUTHOR]

Background: Early embryonic aortic arches (AA) are a dynamic vascular structures that are in the process of shaping into the great arteries of cardiovascular system. Previously, a time-lapsed mechanosensitive gene expression map was established for AA subject to altered mechanical loads in the avian embryo. To validate this map, we investigated effects on vascular microstructure and material properties following the perturbation of key genes using an in-house microvascular gene knockdown system., Results: All siRNA vectors show a decrease in the expression intensity of desired genes with no significant differences between vectors. In TGFβ3 knockdowns, we found a reduction in expression intensities of TGFβ3 (≤76%) and its downstream targets such as ELN (≤99.6%), Fbn1 (≤60%), COL1 (≤52%) and COL3 (≤86%) and an increase of diameter in the left AA (23%). MMP2 knockdown also reduced expression levels in MMP2 (≤30%) and a 6-fold increase in its downstream target COL3 with a decrease in stiffness of the AA wall and an increase in the diameter of the AA (55%). These in vivo measurements were confirmed using immunohistochemistry, western blotting and a computational growth model of the vascular extracellular matrix (ECM)., Conclusions: Localized spatial genetic modification of the aortic arch region governs the vascular phenotype and ECM composition of the embryo and can be integrated with mechanically-induced congenital heart disease models., (© 2024 The Author(s). Developmental Dynamics published by Wiley Periodicals LLC on behalf of American Association for Anatomy.)

Bioenergetic metabolism is a key regulator of cellular function and signaling, but how it can instruct the behavior of cells and their fate during embryonic development remains largely unknown. Here, we investigated the role of glucose metabolism in the development of avian trunk neural crest cells (NCCs), a migratory stem cell population of the vertebrate embryo. We uncovered that trunk NCCs display glucose oxidation as a prominent metabolic phenotype, in contrast to what is seen for cranial NCCs, which instead rely on aerobic glycolysis. In addition, only one pathway downstream of glucose uptake is not sufficient for trunk NCC development. Indeed, glycolysis, mitochondrial respiration and the pentose phosphate pathway are all mobilized and integrated for the coordinated execution of diverse cellular programs, epithelial-to-mesenchymal transition, adhesion, locomotion, proliferation and differentiation, through regulation of specific gene expression. In the absence of glucose, the OXPHOS pathway fueled by pyruvate failed to promote trunk NCC adaptation to environmental stiffness, stemness maintenance and fate-decision making. These findings highlight the need for trunk NCCs to make the most of the glucose pathway potential to meet the high metabolic demands appropriate for their development. [ABSTRACT FROM AUTHOR]

We have devised the unified redox scale EabsH2O, which is valid for all solvents. The necessary single ion Gibbs transfer energy between two different solvents, which only can be determined with extra‐thermodynamic assumptions so far, must clearly satisfy two essential conditions: First, the sum of the independent cation and anion values must give the Gibbs transfer energy of the salt they form. The latter is an observable and measurable without extra‐thermodynamic assumptions. Second, the values must be consistent for different solvent combinations. With this work, potentiometric measurements on silver ions and on chloride ions show that both conditions are fulfilled using a salt bridge filled with the ionic liquid [N2225][NTf2]: if compared to the values resulting from known pKL values, the silver and chloride single ion magnitudes combine within a uncertainty of 1.5 kJ mol−1 to the directly measurable transfer magnitudes of the salt AgCl from water to the solvents acetonitrile, propylene carbonate, dimethylformamide, ethanol, and methanol. The resulting values are used to further develop the consistent unified redox potential scale EabsH2O that now allows to assess and compare redox potentials in and over six different solvents. We elaborate on its implications. [ABSTRACT FROM AUTHOR]

Diffuse large B-cell lymphoma (DLBCL) can be cured with standard front-line immunochemotherapy, whereas nearly 30–40% of patients experience refractory or relapse. For several decades, the standard treatment strategy for fit relapsed/refractory (R/R) DLBCL patients has been high-dose chemotherapy followed by autologous hematopoietic stem cell transplant (auto-SCT). However, the patients who failed in salvage treatment or those ineligible for subsequent auto-SCT have dismal outcomes. Several immune-based therapies have been developed, including monoclonal antibodies, antibody–drug conjugates, bispecific T-cell engaging antibodies, chimeric antigen receptor T-cells, immune checkpoint inhibitors, and novel small molecules. Meanwhile, allogeneic SCT and radiotherapy are still necessary for disease control for fit patients with certain conditions. In this review, to expand clinical treatment options, we summarize the recent progress of immune-related therapies and prospect the future indirections in patients with R/R DLBCL. [ABSTRACT FROM AUTHOR]

Cellular systems must deal with mechanical forces to satisfy their physiological functions. In this context, proteins with mechanosensitive properties play a crucial role in sensing and responding to environmental changes. The discovery of aquaporins (AQPs) marked a significant breakthrough in the study of water transport. Their transport capacity and regulation features make them key players in cellular processes. To date, few AQPs have been reported to be mechanosensitive. Like mechanosensitive ion channels, AQPs respond to tension changes in the same range. However, unlike ion channels, the aquaporin's transport rate decreases as tension increases, and the molecular features of the mechanism are unknown. Nevertheless, some clues from mechanosensitive ion channels shed light on the AQP-membrane interaction. The GxxxG motif may play a critical role in the water permeation process associated with structural features in AQPs. Consequently, a possible gating mechanism triggered by membrane tension changes would involve a conformational change in the cytoplasmic extreme of the single file region of the water pathway, where glycine and histidine residues from loop B play a key role. In view of their transport capacity and their involvement in relevant processes related to mechanical forces, mechanosensitive AQPs are a fundamental piece of the puzzle for understanding cellular responses. [ABSTRACT FROM AUTHOR]

Much attention has been provided to autonomous decentralized systems based on swarm intelligence algorithms in robotics because of their resistance to component failure and ability to adapt to new environments. During development, various types of collectively migrating cells contribute to tissue and organ formation and have provided useful models for studying swarm behaviors. In the adult brain under physiological conditions, collective cell migration is almost exclusively observed in the rostral migratory stream, where adult-born new neurons travel long distances in contiguous chain-like formation. After ischemic stroke, some new neurons migrate toward the lesion site. Studies show that the promotion of migration is critical for efficient neuronal rewiring in the post-stroke brain in rodents. The new neurons traverse to injured tissues that are not conducive to migration by forming small chains, clearing a path through glial cells, and interacting with blood vessels. Although processes involved in migratory behavior, including cytoskeletal dynamics, intercellular adhesion, and chain formation, have been separately investigated, the mechanisms underlying neuronal swarm behavior are unclear. Future studies should help further our understanding of swarm intelligence and advance the development of novel strategies for controlling neuronal migration to promote efficient functional repair and rewiring in various pathological conditions. [ABSTRACT FROM AUTHOR]

We show how both the Chicago Police Department and the New York Police Department sought to settle uncertainty about their propriety and purpose during a period when abrupt transformations destabilized urban order and called the police mandate into question. By comparing annual reports that the Chicago Police Department and the New York Police Department published from 1877 to 1923, we observe two techniques in how the police enacted that settlement: identification of the problems that the police believed themselves uniquely well equipped to manage and authorization of the powers necessary to do so. Comparison of identification and authorization yields insights into the role that these police departments played in convergent and divergent constructions of disorder and, in turn, into Progressivism's varying effects in early urban policing. [ABSTRACT FROM AUTHOR]

Coerced work on parole occurs when people are required to work under the threat of criminal legal repercussions. In the face of barriers to "good" work for people after prison, coercion helps to funnel parolees into positions at the bottom of the labor market. Parolee workers in these positions experience issues common to precarious, low‐wage work (low pay, hazardous working conditions, and labor law violations), as well as heightened vulnerability to predatory employers and exposure to parole‐prohibited activities. Because of the threat‐backed requirements to work, however, parolees must choose to either accept this "bad" work or face potential sanctions. Using mixed‐methods, including a novel form of respondent‐driven sampling I call "Hybrid‐RDS," this article documents the prevalence of coerced work for people on parole in Los Angeles County, identifies the mechanisms through which coercive work operates, and illustrates the problematic employment conditions of coerced work after prison. [ABSTRACT FROM AUTHOR]

The powerful immune responses elicited by the mRNA vaccines targeting the SARS-CoV-2 Spike protein contribute to their high efficacy. Yet, their efficacy can vary greatly between individuals. For vaccines not based on mRNA, cumulative evidence suggests that differences in the composition of the gut microbiome, which impact vaccine immunogenicity, are some of the factors that contribute to variations in efficacy. However, it is unclear if the microbiome impacts the novel mode of immunogenicity of the SARS-CoV-2 mRNA vaccines. We conducted a prospective longitudinal cohort study of individuals receiving SARS-CoV-2 mRNA vaccines where we measured levels of anti-Spike IgG and characterized microbiome composition, at pre-vaccination (baseline), and one week following the first and second immunizations. While we found that microbial diversity at all timepoints correlated with final IgG levels, only at baseline did microbial composition and predicted function correlate with vaccine immunogenicity. Specifically, the phylum Desulfobacterota and genus Bilophila, producers of immunostimulatory LPS, positively correlated with IgG, while Bacteroides was negatively correlated. KEGG predicted pathways relating to SCFA metabolism and sulfur metabolism, as well as structural components such as flagellin and capsular polysaccharides, also positively correlated with IgG levels. Consistent with these findings, depleting the microbiome with antibiotics reduced the immunogenicity of the BNT162b2 vaccine in mice. These findings suggest that gut microbiome composition impacts the immunogenicity of the SARS-CoV-2 mRNA vaccines. [ABSTRACT FROM AUTHOR]

The transmembrane proteins cdon and boc are implicated in regulating hedgehog signaling during vertebrate development. Recent work showing roles for these genes in axon guidance and neural crest cell migration suggest that cdon and boc may play additional functions in regulating directed cell movements. We use newly generated and existing mutants to investigate a role for cdon and boc in zebrafish neural crest cell migration. We find that single mutant embryos exhibit normal neural crest phenotypes, but that neural crest migration is strikingly disrupted in double cdon;boc mutant embryos. We further show that this migration phenotype is associated with defects in the differentiation of slow-twitch muscle cells, and the loss of a Col1a1a-containing extracellular matrix, suggesting that neural crest defects may be a secondary consequence to defects in mesoderm development. Combined, our data add to a growing literature showing that cdon and boc act synergistically to promote hedgehog signaling during vertebrate development, and suggest that the zebrafish can be used to study the function of hedgehog receptor paralogs. [ABSTRACT FROM AUTHOR]

We propose a theoretical procedure for accurate determination of reduction potentials for three metallocene couples, Cp2M+/Cp2M, where M = Fe, Co and Ni. This procedure first computes the gas phase ionization energy (IE) using the explicitly correlated CCSD(T)-F12 method and includes the zero-point energy correction, core–valence electronic correlation, and relativistic and spin–orbit coupling effects. By means of Born–Haber thermochemical cycle, the one-electron reduction potential is obtained as the sum of the gas phase IE and the corresponding Gibbs free energies of solvation (ΔGsolv) for both the neutral and cationic species. Among the three solvent models (PCM, SMD and uESE) investigated here, it turns out that only the SMD model (computed at the DFT level) gives the best estimation of the value for "ΔGsolv(cation) − ΔGsolv(neutral)" and thus, combining with the accurate IE values, the theoretical protocol is capable of yielding reliable values (in V) for , and. These predictions compare favorably with the available experimental data (in V): , , and. We show that our theoretical procedure is reliable for accurate reduction potential predictions of Cp2Fe+/Cp2Fe, Cp2Co+/Cp2Co and Cp2Ni+/Cp2Ni redox couples in aqueous and non-aqueous media; the maximum absolute deviation is as small as ≈120 mV, which outperforms those of the existing theoretical methods. [ABSTRACT FROM AUTHOR]

Cell migration is an essential process that underlies many physiological processes, including the immune response, organogenesis in the embryo, and angiogenesis, as well as pathological processes such as cancer metastasis. Cells have at their disposal a variety of migratory behaviors and mechanisms that seem to be specific to cell type and the microenvironment. Research over the past two decades has elucidated the water channel protein family of aquaporins (AQPs) as a regulator of many cell migration-related processes, from physical phenomena to biological signaling pathways. The roles that AQPs play in cell migration are both cell type- and isoform-specific; thus, a large swath of information has accumulated as researchers seek to identify the responses across these distinct variables. There does not seem to be a universal role that AQPs play in cell migration; the complex interplay between AQPs and cell volume management, signaling pathway activation, and in a few identified circumstances, gene expression regulation, has shown the intricate, and perhaps paradoxical, role of AQPs in cell migration. The objective of this review is to provide an organized and integrated collection of recent work that has elucidated the many mechanisms by which AQPs regulate cell migration. [ABSTRACT FROM AUTHOR]

Purpose: Nutrient and sediment pollution of surface waters remains a critical challenge for improving water quality. This study takes a user-friendly field-scale tool and assesses its ability to model at both the field and watershed scale within the Fox River Watershed (FRW), Wisconsin, USA, along with assessing how targeted vegetation implementation could attenuate nutrient and sediment exports. Methods: To assess potential load reductions, the nutrient tracking tool (NTT) was used with a scoring system to identify areas where vegetation mitigation could be implemented within three selected FRW sub-watersheds. A corn soybean rotation, an implementation of a 10-m-vegetated buffer, a full forest conversion, and tiling were modeled and assessed. The corn–soybean results were aggregated and compared to watershed level gauge data in two sub-watersheds. Edge-of-field data was compared to modeled results using multiple parameterization schemes. Results: The agricultural areas that scored higher and were untiled showed greater potential nutrient and sediment export reduction (up to 80 to 95%) when vegetation mitigation was implemented in the model. Field-scale results aggregated to the watershed scale showed disparities between modeled and measured phosphorus exports but modeled sediment exports fell within observed gauge data ranges. Field-specific parameter adjustments resulted in more accurate modeled results compared to measured edge-of-field export data but needed further refinement. Conclusion: Targeted mitigation using a vegetation-based scoring system with the NTT model was shown to be a helpful tool for predicting nutrient and sediment reductions. Using a field-scale model aggregated to the watershed scale presents tradeoffs regarding processes found beyond the edge of field. [ABSTRACT FROM AUTHOR]

The first samples collected by the Mars 2020 mission represent units exposed on the Jezero Crater floor, from the potentially oldest Séítah formation outcrops to the potentially youngest rocks of the heavily cratered Máaz formation. Surface investigations reveal landscape‐to‐microscopic textural, mineralogical, and geochemical evidence for igneous lithologies, some possibly emplaced as lava flows. The samples contain major rock‐forming minerals such as pyroxene, olivine, and feldspar, accessory minerals including oxides and phosphates, and evidence for various degrees of aqueous activity in the form of water‐soluble salt, carbonate, sulfate, iron oxide, and iron silicate minerals. Following sample return, the compositions and ages of these variably altered igneous rocks are expected to reveal the geophysical and geochemical nature of the planet's interior at the time of emplacement, characterize martian magmatism, and place timing constraints on geologic processes, both in Jezero Crater and more widely on Mars. Petrographic observations and geochemical analyses, coupled with geochronology of secondary minerals, can also reveal the timing of aqueous activity as well as constrain the chemical and physical conditions of the environments in which these minerals precipitated, and the nature and composition of organic compounds preserved in association with these phases. Returned samples from these units will help constrain the crater chronology of Mars and the global evolution of the planet's interior, for understanding the processes that formed Jezero Crater floor units, and for constraining the style and duration of aqueous activity in Jezero Crater, past habitability, and cycling of organic elements in Jezero Crater. Plain Language Summary: Here we provide a narrative of sample collection and associated in situ rover observations for the rocks collected by the Perseverance rover to provide a preliminary description of the first samples of the Mars 2020 mission. These rocks collected in Jezero Crater represent the first samples from Mars with a known geologic context, the first collected with the potential to be returned to Earth for laboratory analysis, and the first cores from rock outcrops on another planet. Remote and proximal analyses indicate that all crater floor outcrops investigated are igneous in origin. Laboratory analyses of these rocks will be useful to study the planet's interior at the time of emplacement, characterize martian magmatism, and place timing constraints on geologic processes, both in Jezero Crater and more widely on Mars. All collected rocks have interacted with water and contain secondary geochemical and mineralogical evidence that can be used to understand aqueous environments in the crater and the potential conditions of habitability for ancient life on Mars. Key Points: Nine samples, consisting of four pairs of rock cores and a tube of atmospheric gas, were collected from the floor of Jezero Crater, MarsIn situ observations of crater floor outcrops, used as proxies for the samples, reveal aqueously altered igneous lithologiesPerseverance will leave one sample from each pair at the Three Forks depot and retain a second to be cached with future samples [ABSTRACT FROM AUTHOR]