101. The chromosome-scale genome of Magnolia officinalis provides insight into the evolutionary position of magnoliids
- Author
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Cheng Peng, Bo Ren, Yanpeng Yin, Xianmei Yin, Junren Chen, Luojing Zhou, Jihai Gao, Feixia Hou, Hongjin Zhong, Li Wang, Jin Pei, Xiaodong Shi, Fu Peng, and Xiaofang Xie
- Subjects
Whole genome sequencing ,Multidisciplinary ,biology ,Phylogenetic tree ,Bioinformatics ,Science ,Genomics ,Evolutionary biology ,biology.organism_classification ,Genome ,Article ,Magnoliaceae ,Magnoliids ,Genomic analysis ,Magnolia officinalis ,Biological sciences ,Genetics ,Clade - Abstract
Summary Magnolia officinalis, a representative tall aromatic tree of the Magnoliaceae family, is a medicinal plant that is widely used in diverse industries from medicine to cosmetics. We report a chromosome-scale draft genome of M. officinalis, in which ∼99.66% of the sequences were anchored onto 19 chromosomes with the scaffold N50 of 76.62 Mb. We found that a high proportion of repetitive sequences was a common feature of three Magnoliaceae with known genomic data. Magnoliids were a sister clade to eudicots-monocots, which provided more support for understanding the phylogenetic position among angiosperms. An ancient duplication event occurred in the genome of M. officinalis and was shared with Lauraceae. Based on RNA-seq analysis, we identified several key enzyme-coding gene families associated with the biosynthesis of lignans in the genome. The construction of the M. officinalis genome sequence will serve as a reference for further studies of Magnolia, as well as other Magnoliaceae., Graphical abstract, Highlights • We provide a chromosome-scale genome for Magnolia officinalis • We explore the phylogenetic position of Magnoliids • Analysis for lignan biosynthetic pathway is reported • We identify terpenes synthase in the floral fragrance composition of Magnolia, Biological sciences; Genetics; Evolutionary biology; Bioinformatics; Genomic analysis; Genomics
- Published
- 2021