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Background Urethral injury during inflatable penile prosthesis (IPP) or artificial urinary sphincter (AUS) placement is rare, and traditionally most prosthetic surgeons abort prosthetic implantation when urethral repair is necessary. Aim To report our experience with synchronous urethroplasty (SU) as a planned or damage control surgery during urologic prosthetic surgery, to evaluate the safety and outcomes of the procedure. Methods A retrospective review of our IPP and AUS database was completed to identify patients who underwent an SU between 2007 and 2018. We included patients who underwent an SU during prosthetic surgery in either a planned procedure for known stricture or diverticulum or a “damage control” procedure after intraoperative injury. Outcome Patient characteristics and surgical outcomes were assessed, with success defined as the absence of urethral stricture and revision surgery. Results From our database of 1,508 prosthetic cases, we identified 7 patients (0.46%) who had an SU in the same setting as complete prosthesis placement (4 AUS and 3 IPP [1 combined IPP/AUS], and 1 sling). Three patients underwent planned repair of a known urethral abnormality (urethral diverticulum, urethrocutaneous fistula, and urethral stricture), and 4 underwent repair of an intraoperative urethral injury. Among the patients who experienced an intraoperative urethral injury, contributing etiologies included previous anti-incontinence surgery with periurethral fibrosis (n = 2), severe corporal fibrosis from priapism, and previous urethral disruption from pelvic fracture. Nearly all of the urethroplasties (6 of 7; 86%) were completed with a primary closure. The average indwelling duration of suprapubic tube (SPT) catheters was 4.1 weeks (range, 7 to 47 days). The average duration of follow-up was 21.5 months, and all patients were continent at follow-up. No device infections or urethral complications were identified. Clinical Implications Our study illustrates the safety of concomitant urethral repair at time of prosthetic placement as an option to avoid the use of 2 anesthetics and prevent further scarring in high-risk patients. Strengths & Limitations This is the first study to address definitive urethral reconstruction during anti-incontinence procedures along with planned concomitant urethroplasty during IPP placement. This promising initial experience is relevant for surgeons who may encounter concomitant urethral pathology in the setting of complex reoperative prosthetic cases. The need for SU is rare, and thus our cohort size was limited in this retrospective, single-institution experience. Conclusion SU with prolonged SPT urinary diversion offers a safe damage control approach for men with concomitant urethral pathology during prosthetic surgery without conferring an increased risk of infection or stricture.

Objective: Evaluate the impact of multi-component quality improvement for pediatric asthma care focusing on serial use of an evidence-based clinical pathway via paper order sets, pathway integratio...

The Ovine Functional Annotation of Animal Genomes (FAANG) project, part of the broader livestock species FAANG initiative, aims to identify and characterize gene regulatory elements in domestic sheep. Regulatory element annotation is essential for identifying genetic variants that affect health and production traits in this important agricultural species, as greater than 90% of variants underlying genetic effects are estimated to lie outside of transcribed regions. Histone modifications that distinguish active or repressed chromatin states, CTCF binding, and DNA methylation were used to characterize regulatory elements in liver, spleen, and cerebellum tissues from four yearling sheep. Chromatin immunoprecipitation with sequencing (ChIP-seq) was performed for H3K4me3, H3K27ac, H3K4me1, H3K27me3, and CTCF. Nine chromatin states including active promoters, active enhancers, poised enhancers, repressed enhancers, and insulators were characterized in each tissue using ChromHMM. Whole-genome bisulfite sequencing (WGBS) was performed to determine the complement of whole-genome DNA methylation with the ChIP-seq data. Hypermethylated and hypomethylated regions were identified across tissues, and these locations were compared with chromatin states to better distinguish and validate regulatory elements in these tissues. Interestingly, chromatin states with the poised enhancer mark H3K4me1 in the spleen and cerebellum and CTCF in the liver displayed the greatest number of hypermethylated sites. Not surprisingly, active enhancers in the liver and spleen, and promoters in the cerebellum, displayed the greatest number of hypomethylated sites. Overall, chromatin states defined by histone marks and CTCF occupied approximately 22% of the genome in all three tissues. Furthermore, the liver and spleen displayed in common the greatest percent of active promoter (65%) and active enhancer (81%) states, and the liver and cerebellum displayed in common the greatest percent of poised enhancer (53%), repressed enhancer (68%), hypermethylated sites (75%), and hypomethylated sites (73%). In addition, both known and de novo CTCF-binding motifs were identified in all three tissues, with the highest number of unique motifs identified in the cerebellum. In summary, this study has identified the regulatory regions of genes in three tissues that play key roles in defining health and economically important traits and has set the precedent for the characterization of regulatory elements in ovine tissues using the Rambouillet reference genome.

The rapid loss of coastal and estuarine biogenic habitats has reduced the delivery of valuable ecosystem services, resulting in calls for increased habitat restoration. Yet, a lack of information on how key habitat characteristics (e.g., area, vertical relief, age) influence the ability of restored habitats to deliver these ecosystem services hinders efforts to maximize the return on restoration investments. We conducted a meta-analysis to assess the influence of reef type (natural or restored), taxa, and restored reef size, vertical relief, age, and tidal zone on the presence and magnitude of recruitment enhancement for nekton (i.e., fish and swimming crabs). Both intertidal and subtidal reefs, as well as restored and natural reefs, enhanced nekton recruitment, though there was variation among taxonomic groups with reef types. Recruitment enhancement was more common across taxa on restored (six families) than on natural (one family) reefs. Resident nekton families were more consistently enhanced than transient families. Nekton enhancement varied with a number of restored reef characteristics. Recruitment enhancement increased with greater reef size across taxa, decreased with higher vertical relief for two families, showed maximum recruitment around a single intertidal reef age for one family, and showed minimum recruitment around a single subtidal reef age for three families. Understanding variation across species in response to key design elements will improve restoration success and enhance return on investment. Moving forward, we recommend studies that vary reef habitat characteristics independently and in combination to identify how variation in these characteristics interact to influence nekton recruitment enhancement by oyster reefs.

Introduction Magnetic Resonance Imaging (MRI) is used to assess the response to Neoadjuvant Chemotherapy (NAC) when used in patients with breast cancer. Method This retrospective observational study compared patterns of tumour response at mid-chemotherapy and post-chemotherapy MRIs to histological outcomes. 118 cases of breast cancer, from a local database, were included. Results There was a significant association between complete pathological response in resected breast tissue and complete radiological response on both mid-chemotherapy MRI (p = 0.007) and post-chemotherapy MRI (p Conclusions Both scans have significant prognostic value. A mid-chemotherapy scan may have superior prognostic value when complete response is achieved, though larger studies are needed to determine the significance. 100% maintenance of complete radiological response after the mid-chemotherapy scan highlights the possibility that some post-chemotherapy scan could be avoided.

Matrix metalloproteinase-9 (MMP-9) and its endogenous inhibitor, tissue inhibitor of metalloproteinase-1 (TIMP-1), are key mediators of acute inflammation and regulators of the wound healing process. The aim of this systematic review was to determine the local and systemic involvement of the MMP-9/TIMP-1 system following burn injury. Two databases (Scopus and MEDLINE) were searched for all studies reporting MMP-9 and/or TIMP-1 after burn injury. Based on our eligibility criteria, we reviewed 24 studies involving 508 burns patients in 11 clinical studies and 367 animals in 13 preclinical studies. Local, systemic, and peripheral gene expression, protein levels and activity of MMP-9 and TIMP-1 were assessed. Increased MMP-9 was reported at the site of injury early after burn trauma in all studies, and remained elevated in non-healing wounds. Increased TIMP-1 expression in burn wounds occurred later than MMP-9, and was persistent in hypertrophic burn scars. Similar to local expression, systemic MMP-9 and TIMP-1 concentrations were significantly elevated after burn injury in response to upregulation of proinflammatory cytokines. While no association was found between systemic MMP-9 concentration and extent of injury or outcome, serum or plasma TIMP-1 showed good correlation with survival and burn severity. This review also found evidence of the MMP-9/TIMP-1 system contributing to secondary tissue damage distant from the burn site, including burn-associated musculoskeletal damage and acute lung injury. In addition, increased MMP-9 synthesis and activity in the brain after peripheral burn may lead to blood-brain barrier dysfunction and cerebral edema, a significant contributor to mortality. This systematic review provides an overview of the available evidence of the role of MMP-9 and TIMP-1 in burn injury pathophysiology and finds that TIMP-1 may be a promising biomarker in outcome prognostication of burns patients. Large-scale studies of both pediatric and adult burns patients with increased female representation and repeated sampling are recommended to validate the reliability of TIMP-1 as a prognostic marker following burn injury.

Populations of migratory waterbirds are facing dramatic declines worldwide due to illegal hunting, habitat loss and climate change. Conservation strategies to reverse these trends are imperative, especially in tropical developing countries, which almost invariably allocate insufficient levels of investment for environmental protection. Here, we compared the effectiveness of sustainable-use Protected Areas (PAs) and Community-based Conservation (CBC) arrangements for the conservation of migratory waterbirds that breed on seasonal riverine sandy beaches in Brazilian Amazonia. We modeled local population responses of four migratory waterbird species on 155 beaches along a ~1,600 km section of a major tributary of the Amazon, as a function of community enforcement, official protection status, human pressure and landscape features. We show that 21 community-protected beaches within the study area host more than 80% of all sampled birds. Black Skimmers showed the most dramatic response, with breeding numbers 135-fold larger in CBC arrangements compared to beaches with no official protection status. The same pattern was observed for nesting Large-Billed and Yellow-Billed Terns. For the Near Threatened Orinoco Goose, PA status was the strongest predictor of local population size. These dramatic results demonstrate the value of protected refugia, achieved through the concerted action of participating local communities, to support breeding populations of key waterbird species. This highly-effective and low-cost conservation model can potentially be replicated in other regions of the developing world experiencing increasingly intensive exploitation of riverine natural resources.

Temperature plays a critical role in growth and development of anurans. Here, we investigated thermal preference of tadpoles from a wide-ranging anuran, Hyla chrysoscelis, by establishing an ex situ thermal gradient in a laboratory setting. We collected 64 tadpoles with a mean (±SD) body length of 12.2 ± 2.1 mm (range, 7–15 mm). Mean temperature preference of tadpoles ranged from 12.9 to 30.0°C, and we found a positive relationship between temperature preference and body length. Although body length is only one component of amphibian development, its apparent link with temperature preference is an exciting area for further research in this species as well as other species. Furthermore, given the broad distribution of H. chrysoscelis, there is an opportunity to investigate how thermal preferences could limit population edges and how populations may respond to shifts in environmental temperatures.

Repetitive head impact (RHI) exposure in collision sports may contribute to adverse neurological outcomes in former players. In contrast to a concussion, or mild traumatic brain injury, “subconcussive” RHIs represent a more frequent and asymptomatic form of exposure. The neural network‐level signatures characterizing subconcussive RHIs in youth collision‐sport cohorts such as American Football are not known. Here, we used resting‐state functional MRI to examine default mode network (DMN) functional connectivity (FC) following a single football season in youth players (n = 50, ages 8–14) without concussion. Football players demonstrated reduced FC across widespread DMN regions compared with non‐collision sport controls at postseason but not preseason. In a subsample from the original cohort (n = 17), players revealed a negative change in FC between preseason and postseason and a positive and compensatory change in FC during the offseason across the majority of DMN regions. Lastly, significant FC changes, including between preseason and postseason and between in‐ and off‐season, were specific to players at the upper end of the head impact frequency distribution. These findings represent initial evidence of network‐level FC abnormalities following repetitive, non‐concussive RHIs in youth football. Furthermore, the number of subconcussive RHIs proved to be a key factor influencing DMN FC., Using resting‐state functional MRI, DeSimone and colleagues demonstrate transient network‐level functional connectivity abnormalities of the default mode network following repetitive, non‐concussive head impact exposure over the course of a single youth football season.

Genomics research has relied principally on the establishment and curation of a reference genome for the species. However, it is increasingly recognized that a single reference genome cannot fully describe the extent of genetic variation within many widely distributed species. Pangenome representations are based on high-quality genome assemblies of multiple individuals and intended to represent the broadest possible diversity within a species. A Bovine Pangenome Consortium (BPC) has recently been established to begin assembling genomes from more than 600 recognized breeds of cattle, together with other related species to provide information on ancestral alleles and haplotypes. Previously reported de novo genome assemblies for Angus, Brahman, Hereford, and Highland breeds of cattle are part of the initial BPC effort. The present report describes a complete single haplotype assembly at chromosome-scale for a fullblood Simmental cow from an F1 bison–cattle hybrid fetus by trio binning. Simmental cattle, also known as Fleckvieh due to their red and white spots, originated in central Europe in the 1830s as a triple-purpose breed selected for draught, meat, and dairy production. There are over 50 million Simmental cattle in the world, known today for their fast growth and beef yields. This assembly (ARS_Simm1.0) is similar in length to the other bovine assemblies at 2.86 Gb, with a scaffold N50 of 102 Mb (max scaffold 156.8 Mb) and meets or exceeds the continuity of the best Bos taurus reference assemblies to date.

Athletes participating in contact sports are exposed to repetitive subconcussive head impacts that may have long-term neurological consequences. To better understand these impacts and their effects, head impacts are often measured during football to characterize head impact exposure and estimate injury risk. Despite widespread use of kinematic-based metrics, it remains unclear whether any single metric derived from head kinematics is well-correlated with measurable changes in the brain. This shortcoming has motivated the increasing use of finite element (FE)-based metrics, which quantify local brain deformations. Additionally, quantifying cumulative exposure is of increased interest to examine the relationship to brain changes over time. The current study uses the atlas-based brain model (ABM) to predict the strain response to impacts sustained by 116 youth football athletes and proposes 36 new, or derivative, cumulative strain-based metrics that quantify the combined burden of head impacts over the course of a season. The strain-based metrics developed and evaluated for FE modeling and presented in the current study present potential for improved analytics over existing kinematically-based and cumulative metrics. Additionally, the findings highlight the importance of accounting for directional dependence and expand the techniques to explore spatial distribution of the strain response throughout the brain.

Bison are an icon of the American West and an ecologically, commercially, and culturally important species. Despite numbering in the hundreds of thousands today, conservation concerns remain for the species, including the impact on genetic diversity of a severe bottleneck around the turn of the 20th century and genetic introgression from domestic cattle. Genetic diversity and admixture are best evaluated at genome-wide scale, for which a high-quality reference is necessary. Here, we use trio binning of long reads from a bison–Simmental cattle (Bos taurus taurus) male F1 hybrid to sequence and assemble the genome of the American plains bison (Bison bison bison). The male haplotype genome is chromosome-scale, with a total length of 2.65 Gb across 775 scaffolds (839 contigs) and a scaffold N50 of 87.8 Mb. Our bison genome is ~13× more contiguous overall and ~3400× more contiguous at the contig level than the current bison reference genome. The bison genome sequence presented here (ARS-UCSC_bison1.0) will enable new research into the evolutionary history of this iconic megafauna species and provide a new tool for the management of bison populations in federal and commercial herds.

B lymphocytes play a critical role in adaptive immunity. Upon antigen binding, B cell receptors (BCR) cluster on the plasma membrane and are internalized by endocytosis. In this process, B cells capture diverse antigens in various contexts and concentrations. However, it is unclear whether the mechanism of BCR endocytosis changes in response to these factors. Here, we studied the mechanism of soluble antigen-induced BCR clustering and internalization in a cultured human B cell line using correlative super resolution fluorescence and platinum replica electron microscopy. First, by visualizing nanoscale BCR clusters, we provide direct evidence that BCR cluster size increases with F(ab’)2 concentration. Next, we show that the physical mechanism of internalization switches in response to BCR cluster size. At low concentrations of antigen, B cells internalize small BCR clusters by classical clathrin-mediated endocytosis. At high antigen concentrations, when clusters size increases beyond the size of a single clathrin coated pit, B cells retrieve receptor clusters using large invaginations of the plasma membrane capped with clathrin. At these sites, we observed early and sustained recruitment of actin and an actin polymerizing protein FCHSD2. We further show that actin recruitment is required for the efficient generation of these novel endocytic carriers and for their capture into the cytosol. We propose that in B cells, the mechanism of endocytosis switches to accommodate large receptor clusters formed when cells encounter high concentrations of soluble antigen. This mechanism is regulated by the organization and dynamics of the cortical actin cytoskeleton.

The excitatory synapse between hippocampal CA3 and CA1 pyramidal neurons exhibits long-term potentiation (LTP), a positive feedback process implicated in learning and memory in which postsynaptic depolarization strengthens synapses, promoting further depolarization. Without mechanisms for interrupting positive feedback, excitatory synapses could strengthen inexorably, corrupting memory storage. Here, we reveal a hidden form of inhibitory synaptic plasticity that prevents accumulation of excitatory LTP. We developed a knockin mouse that allows optical control of endogenous α5-subunit-containing γ-aminobutyric acid (GABA)

Increased consumer interest in high-quality and novel protein sources has driven the demand for the inclusion of protein-rich ingredients in companion animal diets. Novel protein concentrates, with protein contents of at least 50%, have been used to satisfy these consumer demands. However, minimal information is available regarding the macronutrient composition and protein quality of these ingredients that is needed for proper formulation of pet foods. Therefore, the objectives of this study were to determine the macronutrient and amino acid compositions, standardized amino acid digestibility according to the precision-fed rooster assay, and protein quality using digestible indispensable amino acid score (DIAAS like) of pea protein (PP), potato protein (POP), faba bean protein (FBP), soy protein concentrate (SPC), and dried yeast (DY). Precision-fed rooster assays were conducted using cecectomized roosters to calculate standardized amino acid digestibility and true metabolizable energy corrected for nitrogen (TMEn). For all five protein concentrates, all essential amino acids were highly digestible (88.0% to 96.3%, dry matter basis) with differences (P < 0.05) in only lysine, methionine, and tryptophan digestibilities. The TMEn values were highest for POP (4.22 kcal/g) and DY (3.61 kcal/g). The DIAAS-like values for adult dogs indicated that methionine was the first-limiting amino acid in all protein concentrates except POP, where the first-limiting amino acid was tryptophan. Using Association of American Feed Control Officials (AAFCO)-recommended values for adult cats, DIAAS-like values for methionine were lowest (P < 0.05) for FBP at 81.5%, with all other amino acids for all protein concentrates over 100%. The National Research Council (NRC)-recommended allowances for adult cats indicated that DIAAS-like methionine values for PP (92.7%) and FBP (73.8%) were significantly lower (P < 0.05) with these being the first-limiting amino acids, with the remaining amino acids above 100% for the other protein concentrates. The protein quality and high essential amino acid digestibility of these protein concentrates indicate that they would be viable protein sources in canine and feline diets. However, additional complementary protein sources should be included to meet the requirements of all essential amino acids.

Background: Urethral atrophy has long been suggested as the leading cause of artificial urinary sphincter (AUS) revision. Since the introduction of the 3.5 cm AUS cuff in 2010, precise cuff sizing primarily has been suggested to reduce revisions due to urethral atrophy. We evaluated a large contemporary series of reoperative AUS cases to determine reasons for revision surgery. Methods: We retrospectively reviewed our tertiary referral center database of male AUS procedures performed by a single surgeon from 2007–2019. AUS revision or replacement procedures were included for analysis. Cuff sizes and reasons for reoperation were recorded based on intraoperative findings and evaluated for temporal trends. Patients with cuff erosion or lacking follow-up were excluded. Results: Among 714 AUS cases, 177 revisions or replacements were identified. Of these, 137 met inclusion criteria [mean age 71.7 years, median follow-up 52.7 months (IQR 22.3–94.6 months)]. Urethral atrophy was cited as the cause of AUS failure in 8.0% (11/137) of cases overall, virtually never among those with a 3.5 cm cuff placement (1/51, 2.0%). In those with ≥4.0 cm cuffs, urethral atrophy was the reason for revision in 10/86 (11.6%). Pressure regulating balloon (PRB) failure was the most frequently cited cause of failure (47/137, 34.3%). Cuff-related failure (23/137, 16.8%) and mechanical failure of unspecified device component (16/137, 11.8%) were the next most frequent causes of failure. Conclusions: Urethral atrophy has become a rare cause of AUS revision surgery since the availability of smaller cuffs. PRB-related failure is now the leading cause of AUS reoperation.

Background: Impending distal cylinder tip extrusions (DCTE) make up approximately 5-33% of all inflatable penile prosthesis (IPP) reoperations. While there have been a few case reports of DCTE in patients with diabetes and trauma, the current literature regarding risk factors for DCTE is limited. In this study, we examined the long-term sequelae among a large cohort of IPP patients to identify clinical risk factors for impending DCTE. Methods: A retrospective review was completed of our single surgeon IPP database of 797 IPP placement cases from the years 2007 to 2018. We identified those who had a surgical intervention for a confirmed DCTE. Infected prostheses were excluded. The primary clinical end point of this study was to identify the time to extrusion repair from original penile prosthesis placement. Secondary clinical end points included location of extrusion and presence of corporal fibrosis. Results: Between the years 2007 to 2018, 26 cases (3%) of impending or complete cylinder extrusions were identified in our IPP database (n=797). The mean age at initial IPP placement was 58 years, compared to a mean of 66 years at the time of extrusion. The mean time from initial placement to extrusion repair surgery was 8.4 years (median 5.5 years). Most patients (15/26, 57.7%) had a history of prior IPP placement, five of whom had two or more prior prostheses. Location among the 26 extrusions varied—12 (46.2%) lateral, 9 (34.6%) distal urethra, 2 (7.7%) glanular, 2 (7.7%) mid-shaft, and 1 (3.8%) coronal sulcus. Concomitant pathologies identified include Peyronie’s disease (7, 26.9%), idiopathic corporal fibrosis (7, 26.9%) and sickle cell disease with priapism induced erectile dysfunction (3, 11.5%). Conclusions: The risk of IPP extrusion appears to be associated with increased time from initial prosthesis placement, prior history of IPP placement, and the presence of corporal fibrosis or deformity. Patients should be counseled to recognize this important long-term sequela of IPP surgery.

A systematic review of scientific papers on the potential impacts of climate-driven environmental changes on tuna and billfish in the Gulf of Mexico (GOM) was conducted to identify the climate-driven pressures and their associated potential impacts on the reproductive success and survival of tuna and billfish, and which of those impacts may have more relevance for their management and conservation in the GOM by 2050. An Impact Screening Analysis (ISA) was developed to evaluate the potential climate impacts discovered in the literature synthesis by assessing each impact against four criteria, and assigning it a ranking based on likelihood of occurrence (High, Medium, or Low). Results show three types of climate-driven pressures within the High ranking: increased water temperature; changes in ocean circulation and eddy kinetic energy; and changes in storm and wind patterns. Our findings provide valuable information to advance our understanding of key climate-driven physico-chemical processes that can impact the biology of tuna and billfish in the GOM, and enhance conservation and management of these species.

Local adaptation to an environment can vary across very fine scales—as little as a few meters in some species, kilometers in others. This divergence at microgeographic scales has been linked to dispersal ability and could be responsible for geographic variation in the strength of species interactions. For example, the spread of maladaptive traits across short distances could lead to inferior performance and local extinctions across the landscape. We utilized a model study system (headwater streams of New Hampshire) with known differences in dispersal, gene flow, and intraspecific competition to test for microgeographic variation in interspecific competition. We conducted a common garden experiment and measured survival and growth of larval Spring Salamanders from different stream reaches (fish and fishless) in response to the presence of conspecific salamanders or heterospecific Brook Trout fingerlings. We predicted that Spring Salamanders from reaches with fish would have higher competitive performance w...

Insulin secretion is stimulated by glucose metabolism and inhibited by catecholamines through adrenergic receptor stimulation. We determined whether catecholamines suppress oxidative metabolism in β-cells through adrenergic receptors. In Min6 cells and isolated rat islets, epinephrine decreased oxygen consumption rates compared to vehicle control or co-administration of epinephrine with α2-adrenergic receptor antagonist yohimbine. Epinephrine also decreased forskolin-stimulated oxygen consumption rates, indicating cAMP dependent and independent actions. Furthermore, glucose oxidation rates were decreased with epinephrine, independent of the exocytosis of insulin, which was blocked with yohimbine. We evaluated metabolic targets through proteomic analysis after four hour epinephrine exposure that revealed 466 differentially expressed proteins that were significantly enriched for processes including oxidative metabolism, protein turnover, exocytosis, and cell proliferation. These results demonstrate that acute α2-adrenergic stimulation suppresses glucose oxidation in β-cells independent of nutrient availability and insulin exocytosis, while cAMP concentrations are elevated. Proteomics and immunoblots revealed changes in electron transport chain proteins that were correlated with lower metabolic reducing equivalents, intracellular ATP concentrations, and altered mitochondrial membrane potential implicating a new role for adrenergic control of mitochondrial function and ultimately insulin secretion.

Summary Selection for performance in diverse production settings has resulted in variation across sheep breeds worldwide. Although sheep are an important species to the United States, the current genetic relationship among many terminal sire breeds is not well characterized. Suffolk, Hampshire, Shropshire and Oxford (terminal) and Rambouillet (dual purpose) sheep (n = 248) sampled from different flocks were genotyped using the Applied Biosystems Axiom Ovine Genotyping Array (50K), and additional Shropshire sheep (n = 26) using the Illumina Ovine SNP50 BeadChip. Relationships were investigated by calculating observed heterozygosity, inbreeding coefficients, eigenvalues, pairwise Wright’s F ST estimates and an identity by state matrix. The mean observed heterozygosity for each breed ranged from 0.30 to 0.35 and was consistent with data reported in other US and Australian sheep. Suffolk from two different regions of the United States (Midwest and West) clustered separately in eigenvalue plots and the rectangular cladogram. Further, divergence was detected between Suffolk from different regions with Wright’s F ST estimate. Shropshire animals showed the greatest divergence from other terminal breeds in this study. Admixture between breeds was examined using admixture, and based on cross‐validation estimates, the best fit number of populations (clusters) was K = 6. The greatest admixture was observed within Hampshire, Suffolk, and Shropshire breeds. When plotting eigenvalues, US terminal breeds clustered separately in comparison with sheep from other locations of the world. Understanding the genetic relationships between terminal sire breeds in sheep will inform us about the potential applicability of markers derived in one breed to other breeds based on relatedness.

The effect of repetitive sub-concussive head impact exposure in contact sports like American football on brain health is poorly understood, especially in the understudied populations of youth and high school players. These players, aged 9-18 years old may be particularly susceptible to impact exposure as their brains are undergoing rapid maturation. This study helps fill the void by quantifying the association between head impact exposure and functional connectivity, an important aspect of brain health measurable via resting-state fMRI (rs-fMRI). The contributions of this paper are three fold. First, the data from two separate studies (youth and high school) are combined to form a high-powered analysis with 60 players. These players experience head acceleration within overlapping impact exposure making their combination particularly appropriate. Second, multiple features are extracted from rs-fMRI and tested for their association with impact exposure. One type of feature is the power spectral density decomposition of intrinsic, spatially distributed networks extracted via independent components analysis (ICA). Another feature type is the functional connectivity between brain regions known often associated with mild traumatic brain injury (mTBI). Third, multiple supervised machine learning algorithms are evaluated for their stability and predictive accuracy in a low bias, nested cross-validation modeling framework. Each classifier predicts whether a player sustained low or high levels of head impact exposure. The nested cross validation reveals similarly high classification performance across the feature types, and the Support Vector, Extremely randomized trees, and Gradboost classifiers achieve F1-score up to 75%.

Genetic selection can accelerate progress of the United States sheep industry, yet it is underutilized by the seedstock sector. Poor reproductive and lamb rearing rates and inconsistent meat quality are two major issues that have limited domestic production of lamb and allowed imports to hold a more favorable market share in the United States. Better understanding of genetic merit for important production traits earlier in a breeding animal’s life, obtained through the use of genomic technology, is one possible way to address these issues. Flock54, a recently developed low density genotype by sequencing panel, provides genotyping data to producers at a price point that encourages wide-spread utilization. The complete capabilities of the data captured by this panel have yet to be fully explored. This project aims to investigate the application of this 1000 marker panel for the determination of genetic variation (heterozygosity) and inbreeding coefficients within a population. Superior Farms producer-members provided 384 sheep tissue or blood samples from which DNA was extracted and sent to Thermo Fisher for Next-Generation Sequencing (NGS) using Torrent Suite 5.10. Genetic variation and inbreeding coefficients were successfully calculated for all animals. With the ability to estimate relatedness within a population and call markers for economically important quantitative trait loci and mendelian inherited traits, producer utilization of Flock54 can facilitate accurate genetic selection within the U.S sheep industry.

Self-cleaning, antifouling ultrafiltration membranes are critically needed to mitigate organic fouling in water and wastewater treatment. In this study, we fabricated a novel polyvinylidene fluoride (PVDF) composite ultrafiltration membrane coated with FeOCl nanocatalysts (FeOCl/PVDF) via a facile, scalable thermal-treatment method, for the synergetic separation and degradation of organic pollutants. The structure, composition, and morphology of the FeOCl/PVDF membrane were extensively characterized. Results showed that the as-prepared FeOCl/PVDF membrane was uniformly covered with FeOCl nanoparticles with an average diameter of 1–5 nm, which greatly enhanced membrane hydrophilicity. The catalytic self-cleaning and antifouling properties of the FeOCl/PVDF membrane were evaluated in the presence of H2O2 at neutral pH. Using a facile H2O2 cleaning process, we showed that the FeOCl/PVDF membrane can achieve an excellent water flux recovery rate of ∼100%, following organic fouling with a model organic foulant...

Water scarcity, expected to become more widespread in the coming years, demands renewed attention to freshwater protection and management. Critical to this effort are the minimization of freshwater withdrawals and elimination of wastewater discharge, both of which can be achieved via zero liquid discharge (ZLD), an aggressive wastewater management approach. Because of the high energetic cost of thermal desalination, ZLD is particularly challenging for high-salinity wastewaters. In this review, we discuss the potential of high-pressure reverse osmosis (HPRO) (i.e., reverse osmosis operated at a hydraulic pressure greater than ∼100 bar) to efficiently desalinate hypersaline brines. We first discuss the inherent energy efficiency of membrane processes compared to that of conventional thermal processes for brine desalination. We then highlight the opportunity of HPRO to reduce energy requirements for desalination of key high-salinity industrial wastewaters. The current state of membrane materials and processe...

Exploring non-precious-metal catalysts (NPMCs) for highly-efficient oxygen reduction reactions (ORRs) in fuel cells holds great potential to ease the global energy challenge. Recent developments regarding state-of-the-art Fe–N–C catalysts in terms of precursor development, synthesis innovation, and active site identification are compelling. Here, an efficient and sustainable Fe–N–C catalyst was successfully synthesized by temperature-programmed N2-pyrolysis from a ferrous ethylenediaminetetraacetic acid (EDTA) chelate. The unique structural properties were characterized by a wide existence of FeN4/C species encapsulated by a N–C coat, multiple porous morphologies, and a defective graphitic matrix, all of which greatly enhanced their intrinsic conductivities and prevented the aggregation of active moieties. The best Fe–N–C–800 catalysts promoted the ORR peak potential to −0.21 V with a nearly four-electron transfer pathway, only facilitating ∼14% H2O2 production. Both the Mossbauer fingerprints and X-ray absorption near edge structure (XANES) analysis revealed the origin of the ORR features derived from the structural compositions and corresponding hyperfine interaction. Interestingly, the embedding of oxygen in the Fe–N–C structure was found favorable for boosting durability and methanol endurance, which also hints at a strategy for rationally designing and producing promising ORR electrocatalysts from proper approaches and precursors.

The interactions between top- and intermediate-level predators can have significant effects on community structure of food webs. The direct and indirect effects of top predators not only affect prey communities both negatively (e.g. predation) and positively (e.g. thinning effects), but can also impact intermediate-level predators (via intraguild predation [IGP]). These IGP interactions can have especially far-reaching implications when predators of increased ecological importance, such as keystone predators, are involved. Yet, the strength of these interactions are often context-dependent with relationships that are highly variable, and little is known about the factors that shape the outcomes. We conducted a mesocosm experiment to test for the potential IGP interactions among top (invertebrate) and intermediate (amphibian) predators and their effects on a diverse prey community. We used larval Boyeria vinosa (Fawn Darner), a rarely studied member of the family Aeshnidae, and Ambystoma opacum (Marbled Salamander), a known keystone predator in parts of its range, in a mesocosm study with an additive experimental design. Each mesocosm received an equal assemblage of five anuran prey species. Total prey survival was lowest when both predators were present, but A. opacum overwhelmingly reduced the survival of three prey species, lowering species diversity in all food webs when present. Species diversity was highest in the B. vinosa food web, with one prey species (Anaxyrus americanus) emerging smaller and sooner than from other food webs. We did not detect any interactions between predator species, indicating that B. vinosa may not be as voracious as other members of Aeshnidae. Our findings suggest that density mediated IGP interactions are non-existent among our focal species. Ultimately, we also demonstrate the importance of examining variability in keystone predators and how abundant, but less-known predator species affect community structure.

Human population growth and sea-level rise are increasing the demand for protection of coastal property against shoreline erosion. Living shorelines are designed to provide shoreline protection and are constructed or reinforced using natural elements. While living shorelines are gaining popularity with homeowners, their ability to provide ecological services (e.g., habitat provision and trophic transfer) is not well understood, and information is needed to improve coastal and resource management decision-making. We examined benthic community responses to living shorelines in two case-study subestuaries of Chesapeake Bay using a before-after control-impact study design. At Windy Hill, a bulkhead was removed and replaced by three tombolos, sand fill, and native marsh vegetation. At Lynnhaven, 25 m of eroding marsh shoreline was stabilized with coir logs, sand fill, and native marsh vegetation. Communities of large (> 3 mm) infauna adjacent to living shorelines at both locations tended to increase in biomass by the end of the study period. Community compositions changed significantly following living shoreline construction at Windy Hill, reflecting a trend toward higher density and biomass of large bivalves at living shorelines compared to pre-construction. Increasing trends in density and biomass of clams and simultaneously decreasing density and decreasing trends in biomass of polychaetes suggest a transition toward stable infaunal communities at living shorelines over time, though longer-term studies are warranted.

We studied the efficacy of grafting zwitterionic polymer brushes for the antifouling modification of ultrafiltration (UF) membranes. Poly(vinylidene fluoride) (PVDF) UF membranes were modified by surface initiated atom transfer radical polymerization (SI-ATRP) to graft poly(sulfobetaine methacrylate) (PSBMA) brushes to the membrane surface. Protein adsorption tests and chemical force microscopy show that a large brush layer thickness (greater than 100 nm) is necessary in order to impart effective fouling resistance. In dynamic fouling experiments with bovine serum albumin (BSA) as a model foulant, however, the modified membranes exhibited only a slight increase of flux recovery after fouling compared to pristine PVDF membranes. Despite the thick PSBMA brush layer, this low water flux recovery indicates that internal fouling takes place within the membrane pores. To prevent internal fouling, we grafted PSBMA brushes to both the surface and internal structure of the membranes. Nevertheless, dynamic fouling experiments again showed only a minute improvement in water flux recovery. While a thick brush layer is required for effective fouling resistance, we note that the small pore size of UF membranes imposes a fundamental limit on the brush layer thickness inside the pores. Finally, we discuss the challenges of polymer brush grafting for antifouling UF membrane modification and suggest possible alternative methods to create fouling resistant UF membranes.

Background The trauma of surgery is a neglected area of research. Our aim was to examine the differential expression of genes of stress, metabolism and inflammation in the major organs of a rat following a laparotomy. Materials and methods Anaesthetised Sprague-Dawley rats were randomised into baseline, 6-hr and 3-day groups (n = 6 each), catheterised and laparotomy performed. Animals were sacrificed at each timepoint and tissues collected for gene and protein analysis. Blood stress hormones, cytokines, endothelial injury markers and coagulation were measured. Results Stress hormone corticosterone significantly increased and was accompanied by significant increases in inflammatory cytokines, endothelial markers, increased neutrophils (6-hr), higher lactate (3-days), and coagulopathy. In brain, there were significant increases in M1 muscarinic (31-fold) and α-1A-adrenergic (39-fold) receptor expression. Cortical expression of metabolic genes increased ∼3-fold, and IL-1β by 6-fold at 3-days. Cardiac β-1-adrenergic receptor expression increased up to 8.4-fold, and M2 and M1 muscarinic receptors by 2 to 4-fold (6-hr). At 3-days, cardiac mitochondrial gene expression (Tfam, Mtco3) and inflammation (IL-1α, IL-4, IL-6, MIP-1α, MCP-1) were significantly elevated. Haemodynamics remained stable. In liver, there was a dramatic suppression of adrenergic and muscarinic receptor expression (up to 90%) and increased inflammation. Gut also underwent autonomic suppression with 140-fold increase in IL-1β expression (3-days). Conclusions A single laparotomy led to a surgical-induced proinflammatory phenotype involving neuroendocrine stress, cortical excitability, immune activation, metabolic changes and coagulopathy. The pervasive nature of systemic and tissue inflammation was noteworthy. There is an urgent need for new therapies to prevent hyper-inflammation and restore homeostasis following major surgery., Graphical abstract Image 1, Highlights • A single laparotomy activated a surgical-induced stress response. • This was accompanied by inflammation, immune activation, hypermetabolism and coagulopathy. • A standout result was the pervasive nature of systemic and tissue inflammation. • Our study highlights the dynamic nature of genetic changes underpinning the body's early response to major surgery. • There is an urgent need for new therapies to prevent surgical stress and secondary injury and restore homeostatic balance.

Amphibian larvae are commonly used as indicators of aquatic ecosystem health because they are susceptible to contaminants. However, there is limited information on how species characteristics and trophic position influence contaminant loads in larval amphibians. Importantly, there remains a need to understand whether grazers (frogs and toads [anurans]) and predators (salamanders) provide comparable information on contaminant accumulation or if they are each indicative of unique environmental processes and risks. To better understand the role of trophic position in contaminant accumulation, we analyzed composite tissues for 10 metals from larvae of multiple co-occurring anuran and salamander species from 20 wetlands across the United States. We examined how metal concentrations varied with body size (anurans and salamanders) and developmental stage (anurans) and how the digestive tract (gut) influenced observed metal concentrations. Across all wetlands, metal concentrations were greater in anurans than salamanders for all metals tested except mercury (Hg), selenium (Se), and zinc (Zn). Concentrations of individual metals in anurans decreased with increasing weight and developmental stage. In salamanders, metal concentrations were less correlated with weight, indicating diet played a role in contaminant accumulation. Based on batches of similarly sized whole-body larvae compared to larvae with their digestive tracts removed, our results indicated that tissue type strongly affected perceived concentrations, especially for anurans (gut represented an estimated 46-97% of all metals except Se and Zn). This suggests the reliability of results based on whole-body sampling could be biased by metal, larval size, and development. Overall, our data shows that metal concentrations differs between anurans and salamanders, which suggests that metal accumulation is unique to feeding behavior and potentially trophic position. To truly characterize exposure risk in wetlands, species of different life histories, sizes and developmental stages should be included in biomonitoring efforts.

Genomics research has relied principally on the establishment and curation of a reference genome for the species. However, it is increasingly recognized that a single reference genome cannot fully describe the extent of genetic variation within many widely distributed species. Pangenome representations are based on high-quality genome assemblies of multiple individuals and intended to represent the broadest possible diversity within a species. A Bovine Pangenome Consortium (BPC) has recently been established to begin assembling genomes from more than 600 recognized breeds of cattle, together with other related species to provide information on ancestral alleles and haplotypes. Previously reported de novo genome assemblies for Angus, Brahman, Hereford, and Highland breeds of cattle are part of the initial BPC effort. The present report describes a complete single haplotype assembly at chromosome-scale for a fullblood Simmental cow from an F1 bison-cattle hybrid fetus by trio binning. Simmental cattle, also known as Fleckvieh due to their red and white spots, originated in central Europe in the 1830s as a triple-purpose breed selected for draught, meat, and dairy production. There are over 50 million Simmental cattle in the world, known today for their fast growth and beef yields. This assembly (ARS_Simm1.0) is similar in length to the other bovine assemblies at 2.86 Gb, with a scaffold N50 of 102 Mb (max scaffold 156.8 Mb) and meets or exceeds the continuity of the best Bos taurus reference assemblies to date.

Anthropogenic stressors can affect subtidal communities within the land-water interface. Increasing anthropogenic activities, including upland and shoreline development, threaten ecologically important species in these habitats. In this study, we examined the consequences of anthropogenic stressors on benthic macrofaunal communities in 14 subestuaries of Chesapeake Bay. We investigated how subestuary upland use (forested, agricultural, developed land) and shoreline development (riprap and bulkhead compared to marsh and beach) affected density, biomass, and diversity of benthic infauna. Upland and shoreline development were parameters included in the most plausible models among a candidate set compared using corrected Akaike’s Information Criterion. For benthic macrofauna, density tended to be lower in subestuaries with developed or mixed compared to forested or agricultural upland use. Benthic biomass was significantly lower in subestuaries with developed compared to forested upland use, and biomass declined exponentially with proportion of near-shore developed land. Benthic density did not differ significantly among natural marsh, beach, and riprap habitats, but tended to be lower adjacent to bulkhead shorelines. Including all subestuaries, there were no differences in diversity by shoreline type. In low salinities, benthic Shannon (H′) diversity tended to be higher adjacent to natural marshes compared to the other habitats, and lower adjacent to bulkheads, but the pattern was reversed in high salinities. Sediment characteristics varied by shoreline type and contributed to differences in benthic community structure. Given the changes in the infaunal community with anthropogenic stressors, subestuary upland and shoreline development should be minimized to increase benthic production and subsequent trophic transfer within the food web.

TBI includes a broad spectrum of injury severities and pathologies. Functional magnetic resonance imaging (fMRI), both resting state (rs)and task, has been used often in research to study the effects of TBI. While rs-fMRI is not currently applicable in clinical diagnosis of TBI, computer aided tools are making this a possibility for the future. Specifically, graph theory is being used to study the change in networks after TBI. Machine learning methods allows researchers to build models capable of predicting injury severity and recovery trajectories. Magnetoencephalography (MEG) has a much higher temporal resolution and can be used to supplement the rs-fMRI. There are multiple limitations to overcome and factors to consider before rs-fMRI can be used as a clinical tool. However, both rs-fMRI and rs-MEG show promise as tools to predict recovery trajectories and evaluate therapies.

Our aim was to examine the effect of low-volume 0.9% NaCl adenosine, lidocaine and Mg2+ (ALM) ‘drip’ on early immune-inflammatory activation after a single laparotomy with no further manipulation. Male Sprague–Dawley rats were anesthetized and randomly assigned to one of the groups, baseline, 1 h infusion 0.9% NaCl ± ALM and metrics, 1 h infusion and 6-h metrics, and 6 h continuous infusion and metrics. Complete blood count, acid–base balance, systemic levels of IL-6 and IL-10, and coagulation status were measured. After 1 h, there was a disproportionate increase in circulating neutrophils between saline and ALM groups despite an identical 45% fall in lymphocytes. Disproportionate increases also occurred in platelet counts 1 h after surgery, and saline controls had increased respiratory alkalosis at 6 h with higher lactate. Systemic inflammation was also evident after 1 h in both groups (plasma IL-6 increase) and was amplified in saline-controls after 6 h. The ALM group increased anti-inflammatory cytokine IL-10. Surgery was not associated with acute coagulopathy; however, there were significant reductions in fibrinolysis. Following a single laparotomy, ALM infusion appeared to reduce stress-induced release of neutrophils and platelets into the circulation, and reduced acid–base disturbance. After 1 h, both groups had similar IL-6 levels, but ALM animals had increased IL-10, indicating improved inflammatory balance. The uncoupling of inflammation and coagulation activation but not fibrinolysis may offer a unique opportunity to investigate differential activation of innate immunity in response to sterile injury in this model.

Summary Coexistence of organisms in nature is more likely when phenotypic similarities of individuals are reduced. Despite the lack of similarity, distantly related taxa still compete intensely for shared resources. No larger difference between organisms that share a common prey could exist than between carnivorous plants and animals. However, few studies have considered inter-Kingdom competition among carnivorous plants and animals. In order to evaluate interactions between a carnivorous plant (greater bladderwort, Utricularia vulgaris) and a vertebrate (bluegill, Lepomis macrochirus) on a shared prey (zooplankton), we conducted a mesocosm experiment. We deployed two levels of bladderwort presence (functional and crushed) and measured bluegill responses (survival and growth). Zooplankton abundance was reduced the greatest in bluegill and functional bladderwort treatments. Bluegill survival did not differ among treatments, but growth was greatest with crushed bladderwort. Thus, bluegill growth was facilitated by reducing interference competition in the presence of crushed bladderwort. The facilitating effect was dampened, however, when functional bladderwort removed a shared prey. To our knowledge, this is one of the first studies to experimentally demonstrate interactions between a carnivorous plant and a fish. Our data suggest that carnivorous plants may actively promote or reduce animal co-occurrence from some ecosystems via facilitation or competition.

The project was funded in part by the Biotechnology and Biological Sciences Research Council (BB/HO1697X/1). S.E.H. was supported by a Nigel Groome PhD Studentship at Oxford Brookes University. S.E.H. was awarded a practical skills grant from the Society for Endocrinology and a travel grant from the Physiological Society to fund work at the University of Arizona.

Temperature elevation due to climate change is directly altering organismal performance and distributions, but the mechanisms behind these shifts require additional attention. Because small aquatic ectotherms are proposed to perform better at future climates, it is possible that competitive interactions in size-structured communities may also shift. To study the interactive effects of climate and competition on species performance, we evaluated body condition of small and large desmognathan salamanders at current and elevated temperatures in stream mesocosms, and characterized habitat use. In situ evaluation of capture locations demonstrated that the widespread and larger species, Desmognathus conanti, competitively excludes the smaller more narrowly distributed, D. abditus, from stream centers and cooler temperatures, but ex situ mesocosm experiments indicated an interaction between temperature and intra- versus inter-specific competition on D. abditus body condition. At current temperatures, D. abditus body condition increased in the presence of the larger D. conanti, but at elevated temperatures, D. abditus body condition tended to decline in the presence of the larger species relative to intraspecific competitors. We also noted that individuals at future temperatures prioritized growth differently than individuals at current temperatures by shifting allocations away from growth in length to growth in mass consistent with responses of other organisms to stressful conditions that could result in declining reproductive rates. This study demonstrates that processes in size-structured communities may interact with temperature to affect species’ future success.

Introduced species have negative effects on amphibian populations by reducing local recruitment and consuming larvae before metamorphosis. Fish can naturally colonize ponds periodically because of flooding and connectivity with river floodplains. However, many fish introductions have been intentional for commercial, recreational, and biocontrol purposes. In southeast Missouri (USA), Ambystoma maculatum will attempt to breed in ponds even if introduced fish (Lepomis spp.) are present. We predicted that fish would have negative effects on salamander oviposition, hatching success and timing, and larval survival. In order to evaluate the effects of introduced fish on A. maculatum across life stages, we conducted pond surveys and a series of mesocosm experiments. Using field surveys, A. maculatum deposited significantly fewer eggs in ponds with fish. In short-term mesocosm experiments, we found that hatching time was not significantly affected by deposition site or fish cues, however, hatching success was lower for eggs deposited in fish ponds. No A. maculatum larvae survived when fish were present, regardless of egg deposition site. Our study is important because we found that, unless a female avoids depositing eggs with fish, one fish species can have profound effects on larval amphibian persistence. Therefore, small-scale fish introductions for recreation can act as a potential source for reduced recruitment and an increased risk of local extinction.

Purpose To examine the effects of subconcussive impacts resulting from a single season of youth (age range, 8-13 years) football on changes in specific white matter (WM) tracts as detected with diffusion-tensor imaging in the absence of clinically diagnosed concussions. Materials and Methods Head impact data were recorded by using the Head Impact Telemetry system and quantified as the combined-probability risk-weighted cumulative exposure (RWECP). Twenty-five male participants were evaluated for seasonal fractional anisotropy (FA) changes in specific WM tracts: the inferior fronto-occipital fasciculus (IFOF), inferior longitudinal fasciculus, and superior longitudinal fasciculus (SLF). Fiber tracts were segmented into a central core and two fiber terminals. The relationship between seasonal FA change in the whole fiber, central core, and the fiber terminals with RWECP was also investigated. Linear regression analysis was conducted to determine the association between RWECP and change in fiber tract FA during the season. Results There were statistically significant linear relationships between RWEcp and decreased FA in the whole (R2 = 0.433; P = .003), core (R2 = 0.3649; P = .007), and terminals (R2 = 0.5666; P < .001) of left IFOF. A trend toward statistical significance (P = .08) in right SLF was observed. A statistically significant correlation between decrease in FA of the right SLF terminal and RWECP was also observed (R2 = 0.2893; P = .028). Conclusion This study found a statistically significant relationship between head impact exposure and change of FA fractional anisotropy value of whole, core, and terminals of left IFOF and right SLF's terminals where WM and gray matter intersect, in the absence of a clinically diagnosed concussion. © RSNA, 2016.

Resistance to gastrointestinal nematodes has previously been shown to be a moderately heritable trait in some breeds of sheep, but the mechanisms of resistance are not well understood. Selection for resistance currently relies upon faecal egg counts (FEC), blood packed cell volumes and FAMACHA visual indicator scores of anaemia. Identifying genomic markers associated with disease resistance would potentially improve the selection process and provide a more reliable means of classifying and understanding the biology behind resistant and susceptible sheep. A GWAS was conducted to identify possible genetic loci associated with resistance to Haemonchus contortus in Katahdin sheep. Forty animals were selected from the top and bottom 10% of estimated breeding values for FEC from a total pool of 641 sires and ram lambs. Samples were genotyped using Applied Biosystems (TM) Axiom (TM) Ovine Genotyping Array (50K) consisting of 51 572 SNPs. Following quality control, 46 268 SNPs were included in subsequent analyses. Analyses were conducted using a linear regression model in plink v1.90 and a single-locus mixed model in snp and variation suite. Genome-wide significance was determined by a Bonferroni correction for multiple testing. Using linear regression, loci on chromosomes 2, 3, 16, 23 and 24 were significantly associated at the genome level with FEC estimated breeding values, and we identified a region on chromosome 2 that was significant using both statistical analyses. We suggest a potential role for the gene DIS3L2 for gastrointestinal nematode resistance in Katahdin sheep, although further research is needed to validate these findings. Organic Agriculture Research and Extension Initiative grant from the USDA National Institute of Food and Agriculture [2016-51300-25723]; Hatch grant from the USDA National Institute of Food and Agriculture [IDA01566] The authors would like to thank the following for their involvement: Anna Rodriguez, Rebekka Job, Bonus Angus Farm, Birch Cove Farm, Destiny Acres, Downing Acres, Hound River Farm, Mammoth Hills Farm, USDA, ARS and Waldoview Farm. Thermo Fisher provided the genotyping for this research. This project was supported by Organic Agriculture Research and Extension Initiative grant no. 2016-51300-25723 and Hatch grant IDA01566 from the USDA National Institute of Food and Agriculture.