416 results on '"El Fatimy, A."'
Search Results
102. Tumor-Derived Cell Culture Model for the Investigation of Meningioma Biology
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Uhlmann, Erik J, primary, Rabinovsky, Rosalia, additional, Varma, Hemant, additional, El Fatimy, Rachid, additional, Kasper, Ekkehard M, additional, Moore, Justin M, additional, Vega, Rafael A, additional, Thomas, Ajith J, additional, Alterman, Ronald L, additional, Stippler, Martina, additional, Anderson, Matthew P, additional, Uhlmann, Erik N, additional, Kipper, Franciele C, additional, and Krichevsky, Anna M, additional
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- 2021
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103. Field Effect Transistors for Terahertz Detection and Emission
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Knap, Wojciech, Nadar, Salman, Videlier, Hadley, Boubanga-Tombet, Stephane, Coquillat, Dominique, Dyakonova, Nina, Teppe, Frederic, Karpierz, Kristoph, Łusakowski, Jerzy, Sakowicz, Maciej, Kasalynas, Irmantas, Seliuta, Dalius, Valusis, Gintaras, Otsuji, Taiichi, Meziani, Yahya, El Fatimy, Abdel, Vandenbrouk, Simon, Madjour, Kamel, Théron, Didier, and Gaquière, Christophe
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- 2011
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104. UVC-induced stress granules in mammalian cells.
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Mohamed Taha Moutaoufik, Rachid El Fatimy, Hassan Nassour, Cristina Gareau, Jérôme Lang, Robert M Tanguay, Rachid Mazroui, and Edouard W Khandjian
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Medicine ,Science - Abstract
Stress granules (SGs) are well characterized cytoplasmic RNA bodies that form under various stress conditions. We have observed that exposure of mammalian cells in culture to low doses of UVC induces the formation of discrete cytoplasmic RNA granules that were detected by immunofluorescence staining using antibodies to RNA-binding proteins. UVC-induced cytoplasmic granules are not Processing Bodies (P-bodies) and are bone fide SGs as they contain TIA-1, TIA-1/R, Caprin1, FMRP, G3BP1, PABP1, well known markers, and mRNA. Concomitant with the accumulation of the granules in the cytoplasm, cells enter a quiescent state, as they are arrested in G1 phase of the cell cycle in order to repair DNA damages induced by UVC irradiation. This blockage persists as long as the granules are present. A tight correlation between their decay and re-entry into S-phase was observed. However the kinetics of their formation, their low number per cell, their absence of fusion into larger granules, their persistence over 48 hours and their slow decay, all differ from classical SGs induced by arsenite or heat treatment. The induction of these SGs does not correlate with major translation inhibition nor with phosphorylation of the α subunit of eukaryotic translation initiation factor 2 (eIF2α). We propose that a restricted subset of mRNAs coding for proteins implicated in cell cycling are removed from the translational apparatus and are sequestered in a repressed form in SGs.
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- 2014
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105. Heat shock factor 2 is a stress-responsive mediator of neuronal migration defects in models of fetal alcohol syndrome
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El Fatimy, Rachid, Miozzo, Federico, Le Mouël, Anne, Abane, Ryma, Schwendimann, Leslie, Sabéran-Djoneidi, Délara, de Thonel, Aurélie, Massaoudi, Illiasse, Paslaru, Liliana, Hashimoto-Torii, Kazue, Christians, Elisabeth, Rakic, Pasko, Gressens, Pierre, and Mezger, Valérie
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- 2014
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106. Field Effect Transistors for Terahertz Detection: Physics and First Imaging Applications
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Knap, Wojciech, Dyakonov, Mikhail, Coquillat, Dominique, Teppe, Frederic, Dyakonova, Nina, Łusakowski, Jerzy, Karpierz, Krzysztof, Sakowicz, Maciej, Valusis, Gintaras, Seliuta, Dalius, Kasalynas, Irmantas, El Fatimy, Abdelouahad, Meziani, Y. M., and Otsuji, Taiichi
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- 2009
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107. Nuclear Fragile X Mental Retardation Protein is localized to Cajal bodies.
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Alain Y Dury, Rachid El Fatimy, Sandra Tremblay, Timothy M Rose, Jocelyn Côté, Paul De Koninck, and Edouard W Khandjian
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Genetics ,QH426-470 - Abstract
Fragile X syndrome is caused by loss of function of a single gene encoding the Fragile X Mental Retardation Protein (FMRP). This RNA-binding protein, widely expressed in mammalian tissues, is particularly abundant in neurons and is a component of messenger ribonucleoprotein (mRNP) complexes present within the translational apparatus. The absence of FMRP in neurons is believed to cause translation dysregulation and defects in mRNA transport essential for local protein synthesis and for synaptic development and maturation. A prevalent model posits that FMRP is a nucleocytoplasmic shuttling protein that transports its mRNA targets from the nucleus to the translation machinery. However, it is not known which of the multiple FMRP isoforms, resulting from the numerous alternatively spliced FMR1 transcripts variants, would be involved in such a process. Using a new generation of anti-FMRP antibodies and recombinant expression, we show here that the most commonly expressed human FMRP isoforms (ISO1 and 7) do not localize to the nucleus. Instead, specific FMRP isoforms 6 and 12 (ISO6 and 12), containing a novel C-terminal domain, were the only isoforms that localized to the nuclei in cultured human cells. These isoforms localized to specific p80-coilin and SMN positive structures that were identified as Cajal bodies. The Cajal body localization signal was confined to a 17 amino acid stretch in the C-terminus of human ISO6 and is lacking in a mouse Iso6 variant. As FMRP is an RNA-binding protein, its presence in Cajal bodies suggests additional functions in nuclear post-transcriptional RNA metabolism. Supporting this hypothesis, a missense mutation (I304N), known to alter the KH2-mediated RNA binding properties of FMRP, abolishes the localization of human FMRP ISO6 to Cajal bodies. These findings open unexplored avenues in search for new insights into the pathophysiology of Fragile X Syndrome.
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- 2013
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108. Serotonin-Induced Vasoconstriction Mediated by NAD+ as a Therapy for Bleeding Disorders
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R. El Fatimy, Anju Vasudevan, S. Fish, E. Abdallah, Virginia Camacho, Maximilian Y. Emmert, J. Isker, Elisabeth M. Battinelli, H. Rodriguez Cetina Biefer, F. Roberts, A. J. Loscalzo, Yeqi Nian, and Joseph Loscalzo
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business.industry ,medicine ,Serotonin ,NAD+ kinase ,medicine.symptom ,Pharmacology ,business ,Vasoconstriction - Published
- 2021
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109. Glioblastoma-Derived Extracellular Vesicles Facilitate Transformation of Astrocytes via Reprogramming Oncogenic Metabolism
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Wei Yan, Shun Yao, Zhiyun Wei, Rosalia Rabinovsky, Ramil Arora, Yizheng Yao, Anna M. Krichevsky, Alain Charest, Hyun Jung Jun, Evgeny Deforzh, Ailiang Zeng, Erik J. Uhlmann, Yongping You, and Rachid El Fatimy
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0301 basic medicine ,Messenger RNA ,Multidisciplinary ,Chemistry ,Cell ,RNA ,02 engineering and technology ,Cell Biology ,Biological Sciences ,021001 nanoscience & nanotechnology ,Article ,Cell biology ,03 medical and health sciences ,030104 developmental biology ,medicine.anatomical_structure ,Gene expression ,medicine ,Neoplastic transformation ,lcsh:Q ,0210 nano-technology ,lcsh:Science ,Reprogramming ,Astrocyte ,Extracellular RNA ,Cancer - Abstract
Summary Glioblastoma (GBM) may arise from astrocytes through a multistep process involving a progressive accumulation of mutations. We explored whether GBM-derived extracellular vesicles (EVs) may facilitate neoplastic transformation and malignant growth of astrocytes. We utilized conditioned media (CM) of cultured glioma cells, its sequential filtration, diverse cell-based assays, RNA sequencing, and metabolic assays to compare the effects of EV-containing and EV-depleted CM. GBM EVs facilitated the neoplastic growth of pre-transformed astrocytes but not normal human or mouse astrocytes. They induced proliferation, self-renewal, and colony formation of pre-transformed astrocytes and enhanced astrocytoma growth in a mouse allograft model. GBM EVs appear to reprogram astrocyte metabolism by inducing a shift in gene expression that may be partly associated with EV-mediated transfer of full-length mRNAs encoding ribosomal proteins, oxidative phosphorylation, and glycolytic factors. Our study suggests an EV/extracellular RNA (exRNA)-mediated mechanism that contributes to astrocyte transformation via metabolic reprograming and implicates horizontal mRNA transfer., Graphical Abstract, Highlights • Extracellular vesicles (EVs) shed by glioma cells are taken up by astrocytes • Glioma EVs facilitate astrocyte transformation and tumor growth • EVs reprogram glycolysis and oxidative phosphorylation of transformed astrocytes • mRNAs coding ribosomal proteins and other factors are dispersed via EVs, Biological Sciences; Cell Biology; Cancer
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- 2020
110. The 'HSF connection': Pleiotropic regulation and activities of Heat Shock Factors shape pathophysiological brain development
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Aurélie de Thonel, Valérie Mezger, Véronique Dubreuil, Agathe Duchateau, Rachid El Fatimy, Centre épigénétique et destin cellulaire (EDC (UMR_7216)), Centre National de la Recherche Scientifique (CNRS)-Université de Paris (UP), Physiologie de la Nutrition et Toxicologie (NUTox) (U866, Lipides et nutrition, équipe 7) (NUTox), Lipides - Nutrition - Cancer (U866) (LNC), Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Bourgogne (UB)-Ecole Nationale Supérieure de Biologie Appliquée à la Nutrition et à l'Alimentation de Dijon (ENSBANA)-AgroSup Dijon - Institut National Supérieur des Sciences Agronomiques, de l'Alimentation et de l'Environnement-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Bourgogne (UB)-Ecole Nationale Supérieure de Biologie Appliquée à la Nutrition et à l'Alimentation de Dijon (ENSBANA)-AgroSup Dijon - Institut National Supérieur des Sciences Agronomiques, de l'Alimentation et de l'Environnement, Centre National de la Recherche Scientifique (CNRS)-Université Paris Diderot - Paris 7 (UPD7), Institut de biologie de l'ENS Paris (IBENS), Centre National de la Recherche Scientifique (CNRS)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Département de Biologie - ENS Paris, École normale supérieure - Paris (ENS Paris), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-École normale supérieure - Paris (ENS Paris), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Institut de biologie de l'ENS Paris (UMR 8197/1024) (IBENS), and Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Département de Biologie - ENS Paris
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0301 basic medicine ,Brain development ,Transcription, Genetic ,[SDV.NEU.NB]Life Sciences [q-bio]/Neurons and Cognition [q-bio.NC]/Neurobiology ,[SDV]Life Sciences [q-bio] ,Neurodevelopment ,Biology ,03 medical and health sciences ,0302 clinical medicine ,Transcription (biology) ,Animals ,Humans ,Transcription factor ,Gene ,Heat-Shock Proteins ,ComputingMilieux_MISCELLANEOUS ,[SDV.MHEP.PED]Life Sciences [q-bio]/Human health and pathology/Pediatrics ,General Neuroscience ,Prenatal stress ,Brain ,Reproductive failure ,Pathophysiology ,3. Good health ,Heat shock factor ,030104 developmental biology ,HSFs ,[SDV.BDD.EO]Life Sciences [q-bio]/Development Biology/Embryology and Organogenesis ,[SDV.MHEP.PSM]Life Sciences [q-bio]/Human health and pathology/Psychiatrics and mental health ,Vertebrates ,Heat shock transcription factors ,Neuroscience ,Transcription ,Heat-Shock Response ,030217 neurology & neurosurgery - Abstract
International audience; The Heat Shock Factors (HSFs) have been historically identified as a family of transcription factors that are activated and work in a stress-responsive manner, after exposure to a large variety of stimuli. However, they are also critical in normal conditions, in a life long manner, in a number of physiological processes that encompass gametogenesis, embryonic development and the integrity of adult organs and organisms. The importance of such roles is emphasized by the devastating impact of their deregulation on health, ranging from reproductive failure, neurodevelopmental disorders, cancer, and aging pathologies, including neurodegenerative disorders. Here, we provide an overview of the delicate choreography of the regulation of HSFs during neurodevelopment, at prenatal and postnatal stages. The regulation of HSFs acts at multiple layers and steps, and comprises the control of (i) HSF mRNA and protein levels, (ii) HSF activity in terms of DNA-binding and transcription, (iii) HSF homo- and hetero-oligomerization capacities, and (iv) HSF combinatory set of post-translational modifications. We also describe how these regulatory mechanisms operate in the normal developing brain and how their perturbation impact neurodevelopment under prenatal or perinatal stress conditions. In addition, we put into perspective the possible role of HSFs in the evolution of the vertebrate brains and the importance of the HSF pathway in a large variety of neurodevelopmental disorders.
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- 2020
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111. Correction to: Tumor-Derived Cell Culture Model for the Investigation of Meningioma Biology
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Erik J Uhlmann, Rosalia Rabinovsky, Hemant Varma, Rachid El Fatimy, Ekkehard M Kasper, Justin M Moore, Rafael A Vega, Ajith J Thomas, Ronald L Alterman, Martina Stippler, Matthew P Anderson, Erik N Uhlmann, Franciela C Kipper, and Anna M Krichevsky
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Cellular and Molecular Neuroscience ,Neurology ,Neurology (clinical) ,General Medicine ,Pathology and Forensic Medicine - Published
- 2022
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112. Correction: Fragile Mental Retardation Protein Interacts with the RNA-Binding Protein Caprin1 in Neuronal RiboNucleoProtein Complexes.
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Rachid El Fatimy, Sandra Tremblay, Alain Y. Dury, Samuel Solomon, Paul De Koninck, John W. Schrader, and Edouard W. Khandjian
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Medicine ,Science - Published
- 2012
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113. Fragile X mental retardation protein interacts with the RNA-binding protein Caprin1 in neuronal RiboNucleoProtein complexes [corrected].
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Rachid El Fatimy, Sandra Tremblay, Alain Y Dury, Samuel Solomon, Paul De Koninck, John W Schrader, and Edouard W Khandjian
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Medicine ,Science - Abstract
Fragile X syndrome is caused by the absence of the Fragile X Mental Retardation Protein (FMRP), an RNA-binding protein. FMRP is associated with messenger RiboNucleoParticles (mRNPs) present in polyribosomes and its absence in neurons leads to alteration in synaptic plasticity as a result of translation regulation defects. The molecular mechanisms by which FMRP plays a role in translation regulation remain elusive. Using immunoprecipitation approaches with monoclonal Ab7G1-1 and a new generation of chicken antibodies, we identified Caprin1 as a novel FMRP-cellular partner. In vivo and in vitro evidence show that Caprin1 interacts with FMRP at the level of the translation machinery as well as in trafficking neuronal granules. As an RNA-binding protein, Caprin1 has in common with FMRP at least two RNA targets that have been identified as CaMKIIα and Map1b mRNAs. In view of the new concept that FMRP species bind to RNA regardless of known structural motifs, we propose that protein interactors might modulate FMRP functions.
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- 2012
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114. Synergistic antioxidant effects of natural compounds on H2O2-induced cytotoxicity of human monocytes.
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Mrid, Reda Ben, Bouchmaa, Najat, Ouedrhiri, Wessal, Ennoury, Abdelhamid, Zouaoul, Zakia, Kabach, Imad, Nhiri, Mohamed, and El Fatimy, Rachid
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SYRINGIC acid ,ELLAGIC acid ,OXIDATIVE stress ,ANTIOXIDANTS ,GLYOXALASE ,CYTOPROTECTION ,MONOCYTES - Abstract
Natural compounds are endowed with a broad spectrum of biological activities, including protection against Toxins. Most of them are known for their antioxidant and radical scavenging activities. However, the synergistic combination of these natural molecules is not well studied. Therefore, the present study aims first to investigate the effect of four potent natural molecules [rosmarinic acid (Ros-A), ellagic acid (Ella-A), curcumin (Cur), and syringic acid (Syr-A)] on H
2 O2 -induced cell cytotoxicity and oxidative stress on the human monocytes (THP-1) and then to evaluate their combined action effect. Optimal combinations of these molecules were predicted using an augmented mixture design approach. In the first, as preliminary antioxidant activities screening, two in vitro assays were adopted to assess the single radicals scavenging activity of these natural compounds, DPPH• and ABTS• + tests. Based on the results obtained, the multitude of optimal formulas proposed by the mixture design study led to choosing four potent compositions (comp) in addition to ellagic acid, proposed as the most efficient when applied alone. The different molecules and mixtures were used to assess their cytoprotective effect on THP-1 cells in the presence and absence of H2 O2 . The most potent Comp-4, as well as the molecules forming this mixture, were exploited in a second experiment, aiming to understand the effect on oxidative stress via antioxidant enzyme activities analysis in the H2 O2 -induced oxidative stress in the THP-1 cell line. Interestingly, the natural molecules used for THP-1 cells treatment exhibited a significant increase in the antioxidant defense and glyoxalase system as well as suppression of ROS generation evaluated as MDA content. These results indicate that the natural compounds tested here, especially the synergistic effect of Cur and Ros-A (Comp-4), could serve as cytoprotective and immunostimulant agents against H2 O2 -induced cytotoxicity THP-1 cells, which makes them interesting for further investigations on the molecular mechanisms in preclinical animal models. [ABSTRACT FROM AUTHOR]- Published
- 2022
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115. Phosphoreneâ€"an emerging two-dimensional material: recent advances in synthesis, functionalization, and applications.
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Chaudhary, Vivek, Neugebauer, P, Mounkachi, O, Lahbabi, S, and El Fatimy, A
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- 2022
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116. Electron mobility in quasi-ballistic Si MOSFETs
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Łusakowski, J., Knap, W., Meziani, Y., Cesso, J.-P., El Fatimy, A., Tauk, R., Dyakonova, N., Ghibaudo, G., Boeuf, F., and Skotnicki, T.
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- 2006
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117. A novel function for the survival motoneuron protein as a translational regulator
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Sanchez, Gabriel, Dury, Alain Y., Murray, Lyndsay M., Biondi, Olivier, Tadesse, Helina, El Fatimy, Rachid, Kothary, Rashmi, Charbonnier, Frédéric, Khandjian, Edouard W., and Côté, Jocelyn
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- 2013
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118. Serotonin-Induced Vasoconstriction Mediated by NAD+ as a Therapy for Bleeding Disorders
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Biefer, H. Rodriguez Cetina, additional, Isker, J., additional, Nian, Y., additional, El Fatimy, R., additional, Camacho, V., additional, Emmert, M. Y., additional, Fish, S., additional, Loscalzo, A. J., additional, Roberts, F., additional, Battinelli, E., additional, Loscalzo, J., additional, Vasudevan, A., additional, and Abdallah, E., additional
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- 2021
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119. NAD+ prevents septic shock-induced death by non-canonical inflammasome blockade and IL-10 cytokine production in macrophages
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Cetina Biefer Hr, Eskandari Sk, Yeqi Nian, Anju Vasudevan, Rachid El Fatimy, Jasper Iske, and Abdallah Elkhal
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0303 health sciences ,Septic shock ,Chemistry ,medicine.medical_treatment ,Pyroptosis ,Inflammasome ,medicine.disease ,3. Good health ,Blockade ,Cell biology ,03 medical and health sciences ,Interleukin 10 ,0302 clinical medicine ,Cytokine ,medicine ,NAD+ kinase ,Signal transduction ,030304 developmental biology ,030215 immunology ,medicine.drug - Abstract
Septic shock is characterized by an excessive inflammatory response depicted in a cytokine storm that results from invasive bacterial and viral infections. Non-canonical inflammasome activation is crucial in the development of septic shock promoting pyroptosis and pro-inflammatory cytokine production via caspase-11 and Gasdermin-D (GSDMD). Here, we show that NAD+treatment protected mice towards bacterial and LPS induced endotoxic shock by blocking the non-canonical inflammasome specifically. NAD+administration impeded systemic IL-1β and IL-18 production and GSDMD-mediated pyroptosis of macrophages via the IFN-β/STAT-1 signaling machinery. More importantly, NAD+administration not only improved casp-11-/-survival but rendered WT mice completely resistant to septic shock via the IL-10 signaling pathway that was independent from the non-canonical inflammasome. Here, we delineated a two-sided effect of NAD+blocking septic shock through a specific inhibition of the non-canonical inflammasome and promoting immune homeostasis via IL-10, underscoring its unique therapeutic potential.
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- 2020
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120. Towards sensitive terahertz detection based on graphene quantum dot bolometer (Conference Presentation)
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Luke St. Marie, Ivan Nemec, D. Kurt Gaskill, Petr Neugebauer, Paola Barbara, Peize Han, Abdelouahad El Fatimy, and Rachael L. Myers-Ward
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Materials science ,Graphene ,Band gap ,business.industry ,Terahertz radiation ,Bolometer ,Graphene quantum dot ,law.invention ,law ,Quantum dot ,Optoelectronics ,Bilayer graphene ,business ,Temperature coefficient - Abstract
Light absorption in graphene causes a significant change in electron temperature due to the low electronic heat capacity and weak electron-phonon coupling. This property makes graphene a beautiful material for hot-electron bolometers (HEB). However, along with the above advantages, a major challenge remains that, with weak electron-phonon scattering, the resistance is only weakly temperature dependent for pristine graphene. It is thus challenging to measure the electron temperature change due to incoming radiation power. In addition, thermally isolating graphene in order to achieve the small electron-phonon thermal conductance is difficult. To overcome this issue, stronger temperature dependence has been obtained either by using dual-gated bilayer graphene to create a tunable bandgap or by introducing defects to induce strong localization. Both schemes have successfully produced bolometric detection, with responsivities up to 2×105 V W−1 and a temperature coefficient for the resistance as high as 22 kΩ K−1 at 1.5 K. Here we use graphene quantum dots, where a bandgap is induced via quantum confinement and the graphene quantum dots device exhibits an extraordinarily high variation of resistance with temperature (higher than 430 MΩ K−1), leading to responsivities of 1 × 1010 V W−1.
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- 2019
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121. Nanostructured graphene for nanoscale electron paramagnetic resonance spectroscopy
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St. Marie, Luke, El Fatimy, Abdelouahad, Hrubý, Jakub, Nemec, Ivan, Hunt, James, Myers-Ward, Rachael, Gaskill, Kurt, Kruskopf, Mattias, Yang, Yanfei, Elmquist, Randolph, Marx, Raphael, van Slageren, Joris, Neugebauer, Petr, Barbara, Paola, St. Marie, Luke, El Fatimy, Abdelouahad, Hrubý, Jakub, Nemec, Ivan, Hunt, James, Myers-Ward, Rachael, Gaskill, Kurt, Kruskopf, Mattias, Yang, Yanfei, Elmquist, Randolph, Marx, Raphael, van Slageren, Joris, Neugebauer, Petr, and Barbara, Paola
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The opening of a quantum confinement gap in nanostructured graphene yields extremely sensitive photodetectors, with electrical noise equivalent power lower than 1015 W Hz0.5 at temperatures below 3 K, for detection of radiation in a very broad frequency range, including ultraviolet, visible and terahertz. Here we demonstrate the operation of these detectors in the presence of magnetic field as high as 7 T, paving the way to in situ spectroscopy of molecular nanomagnets.
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- 2020
122. Ambient effects on photogating in MoS
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Peize, Han, Eli R, Adler, Yijing, Liu, Luke, St Marie, Abdel, El Fatimy, Scott, Melis, Edward, Van Keuren, and Paola, Barbara
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Atomically thin transition metal dichalcogenides (TMDs) are ideal candidates for ultrathin optoelectronics that are flexible and semitransparent. Photodetectors based on TMDs show remarkable performance, with responsivity and detectivity higher than 10
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- 2019
123. DC CHARACTERISTIC OF HIGH-ELECTRON-MOBILITY TRANSISTOR (HEMT) ON
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Ruthvik Sainath Meka and A. EL Fatimy
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- 2019
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124. Nanostructured graphene for nanoscale electron paramagnetic resonance spectroscopy
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Marie, Luke St, primary, El Fatimy, Abdel, additional, Hrubý, Jakub, additional, Nemec, Ivan, additional, Hunt, James, additional, Myers-Ward, Rachael, additional, Gaskill, D Kurt, additional, Kruskopf, Mattias, additional, Yang, Yanfei, additional, Elmquist, Randolph, additional, Marx, Raphael, additional, van Slageren, Joris, additional, Neugebauer, Petr, additional, and Barbara, Paola, additional
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- 2020
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125. Terahertz Detection Related to Plasma Excitations in Nanometer Gate Length Field Effect Transistor.
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Knap, W., El Fatimy, A., Tauk, R., Tombet, S. Boubanga, and Teppe, F.
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- 2006
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126. Co-cultures of Glioma Stem Cells and Primary Neurons, Astrocytes, Microglia, and Endothelial Cells for Investigation of Intercellular Communication in the Brain
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Rachid El Fatimy, Zhiyun Wei, Anna M. Krichevsky, Shubham Kale, and Rosalia Rabinovsky
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0301 basic medicine ,Cell type ,Cell ,neurons ,microglia ,lcsh:RC321-571 ,03 medical and health sciences ,0302 clinical medicine ,medicine ,Extracellular ,lcsh:Neurosciences. Biological psychiatry. Neuropsychiatry ,Microglia ,Chemistry ,General Neuroscience ,astrocytes ,Cell biology ,030104 developmental biology ,medicine.anatomical_structure ,Cell culture ,030220 oncology & carcinogenesis ,intercellular communication ,glioma stem cells ,Stem cell ,extracellular vesicles ,Intracellular ,Extracellular RNA - Abstract
Intercellular communication within complex biological and pathological systems via extracellular vesicles (EVs) and secreted factors is a highly attractive area of research. However, cell models enabling investigation of such communication in vitro are limited. Commonly utilized is the supplementation of hyper-concentrated EVs or other extracellular factors to the recipient cell cultures. This approach requires purification of the secreted complexes and is confounded by the contamination of media components. Two-chamber co-cultures of donor and recipient cells separated by a pore membrane may represent a more physiological and better-controlled system for the investigation of intercellular communication. Yet, distinct culture conditions for different neural cell types often make them incompatible for co-culturing. Here we optimized short-term co-cultures of patient-derived low-passage glioma-initiating stem cells with normal cells of the brain microenvironment, such as primary neurons, astrocytes, microglia, and brain endothelial cells. We demonstrate the culture compatibility of these cell types and internalization of glioma-derived extracellular RNA by the normal recipient cells. The presented protocols are valuable for the investigation of intercellular communication between glioma brain tumor and cells of its microenvironment, including but not limited to the EVs-mediated communication.RESEARCH IN CONTEXTCell-to-cell communication is essential in normal physiology and implicated in disease; however, experimental systems for its modeling in vitro are limited. Particularly, the investigation of communication between brain tumors and normal cells of the brain microenvironment has been challenged by the lack of adequate culture models. Here we developed co-cultures of glioma stem cells with various types of normal brain cells, including primary neurons, astrocytes, microglia, and brain endothelial cells, and demonstrated their utility for the study of intercellular communication. Detection of proposed markers in the recipient cells confirmed RNA transfer in these co-cultures.
- Published
- 2018
127. Nanostructured epitaxial graphene for ultra-broadband optoelectronic detectors (Conference Presentation)
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Luke St. Marie, Abdel El Fatimy, Thomas E. Murphy, Anthony K. Boyd, Mohammad M. Jadidi, D. Kurt Gaskill, Rachael L. Myers-Ward, Paola Barbara, Anindya Nath, Byoung Don Kong, and Kevin M. Daniels
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Materials science ,Terahertz radiation ,Graphene ,Band gap ,business.industry ,Nanophotonics ,Photodetector ,law.invention ,law ,Quantum dot ,Monolayer ,Optoelectronics ,Direct and indirect band gaps ,business - Abstract
Atomically thin materials like semimetallic graphene and semiconducting transition metal dichalcogenides (TMDs) are an ideal platform for ultra-thin optoelectronic devices due to their direct bandgap (for monolayer thickness) and their considerable light absorption. For devices based on semiconducting TMDs, light detection occurs by optical excitation of charge carriers above the bandgap. For gapless graphene, light absorption causes a large increase in electron temperature, because of its small electronic heat capacity and weak electron-phonon coupling, making it suitable for hot-electron detectors. Here we show that, by nanostructuring graphene into quantum dots, we can exploit quantum confinement to achieve hot-electron bolometric detection. The graphene quantum dots are patterned from epitaxial graphene on SiC, with dot diameter ranging from 30 nm to 700 nm [1]. Nanostructuring greatly increases the temperature dependence of the electrical resistance, yielding detectors with extraordinary performance (responsivities of 1 × 10^(10) V W^(−1) and electrical noise-equivalent power, ∼2 × 10^(−16) W Hz^(−1/2) at 2.5 K). We will discuss how the dynamics of the charge carriers, namely the hot-electron cooling, affects the device operation and its power dependence. These detectors work in a very broad spectral range, from terahertz through telecom to ultraviolet radiation [2], with a design that is easily scalable for detector arrays. [1] El Fatimy, A. et al. , "Epitaxial graphene quantum dots for high-performance terahertz bolometers," Nature Nanotechnology 11, 335-338 (2016). [2] El Fatimy, A. et al. , "Ultra-broadband photodetectors based on epitaxial graphene quantum dots" Nanophotonics (2018).
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- 2018
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128. Towards sensitive terahertz detection based on graphene quantum dot bolometer (Conference Presentation)
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El Fatimy, Abdelouahad, primary, Neugebauer, Petr, additional, St. Marie, Luke, additional, Nemec, Ivan, additional, Han, Peize, additional, Myers-Ward, Rachael L., additional, Gaskill, D. Kurt, additional, and Barbara, Paola, additional
- Published
- 2019
- Full Text
- View/download PDF
129. Ultra-broadband photodetectors based on epitaxial graphene quantum dots
- Author
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El Fatimy, Abdel, primary, Nath, Anindya, additional, Kong, Byoung Don, additional, Boyd, Anthony K., additional, Myers-Ward, Rachael L., additional, Daniels, Kevin M., additional, Jadidi, M. Mehdi, additional, Murphy, Thomas E., additional, Gaskill, D. Kurt, additional, and Barbara, Paola, additional
- Published
- 2019
- Full Text
- View/download PDF
130. Ambient effects on photogating in MoS2 photodetectors
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Han, Peize, primary, Adler, Eli R, additional, Liu, Yijing, additional, St Marie, Luke, additional, El Fatimy, Abdel, additional, Melis, Scott, additional, Van Keuren, Edward, additional, and Barbara, Paola, additional
- Published
- 2019
- Full Text
- View/download PDF
131. Co-cultures of Glioma Stem Cells and Primary Neurons, Astrocytes, Microglia, and Endothelial Cells for Investigation of Intercellular Communication in the Brain
- Author
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Wei, Zhiyun, primary, Kale, Shubham, additional, El Fatimy, Rachid, additional, Rabinovsky, Rosalia, additional, and Krichevsky, Anna M., additional
- Published
- 2019
- Full Text
- View/download PDF
132. The Cancer Genome Atlas Analysis Predicts MicroRNA for Targeting Cancer Growth and Vascularization in Glioblastoma
- Author
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Rachid El Fatimy, Athul Mohan, Anna M. Krichevsky, Erik J. Uhlmann, Sindhuja Gowrisankaran, Ming Yi, Eric G. Marcusson, Hiroaki Wakimoto, Bakhos A. Tannous, Robert M. Stephens, Priya Karmali, Hon Kit Wong, Courtney Onodera, Jun S. Song, and Zhiyun Wei
- Subjects
Angiogenesis ,Oligonucleotides ,Notch signaling pathway ,Apoptosis ,Biology ,Bioinformatics ,Neovascularization ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Glioma ,microRNA ,Drug Discovery ,medicine ,Genetics ,Animals ,Humans ,Molecular Biology ,Cell Proliferation ,030304 developmental biology ,Pharmacology ,0303 health sciences ,Neovascularization, Pathologic ,Brain Neoplasms ,Genome, Human ,Cell growth ,medicine.disease ,Xenograft Model Antitumor Assays ,Gene Expression Regulation, Neoplastic ,MicroRNAs ,030220 oncology & carcinogenesis ,Cancer research ,Molecular Medicine ,Original Article ,medicine.symptom ,Stem cell ,Signal transduction ,Glioblastoma ,Signal Transduction - Abstract
Using in silico analysis of The Cancer Genome Atlas (TCGA), we identified microRNAs associated with glioblastoma (GBM) survival, and predicted their functions in glioma growth and progression. Inhibition of two “risky” miRNAs, miR-148a and miR-31, in orthotopic xenograft GBM mouse models suppressed tumor growth and thereby prolonged animal survival. Intracranial tumors treated with uncomplexed miR-148a and miR-31 antagomirs exhibited reduced proliferation, stem cell depletion, and normalized tumor vasculature. Growth-promoting functions of these two miRNAs were, in part, mediated by the common target, the factor inhibiting hypoxia-inducible factor 1 (FIH1), and the downstream pathways involving hypoxia-inducible factor HIF1α and Notch signaling. Therefore, miR-31 and miR-148a regulate glioma growth by maintaining tumor stem cells and their niche, and providing the tumor a way to activate angiogenesis even in a normoxic environment. This is the first study that demonstrates intratumoral uptake and growth-inhibiting effects of uncomplexed antagomirs in orthotopic glioma.
- Published
- 2015
- Full Text
- View/download PDF
133. Highly sensitive MoS
- Author
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Peize, Han, Luke, St Marie, Qing X, Wang, Nicholas, Quirk, Abdel, El Fatimy, Masahiro, Ishigami, and Paola, Barbara
- Abstract
Two-dimensional materials such as graphene and transition metal dichalcogenides (TMDs) are ideal candidates to create ultra-thin electronics suitable for flexible substrates. Although optoelectronic devices based on TMDs have demonstrated remarkable performance, scalability is still a significant issue. Most devices are created using techniques that are not suitable for mass production, such as mechanical exfoliation of monolayer flakes and patterning by electron-beam lithography. Here we show that large-area MoS
- Published
- 2018
134. MicroRNA-132 provides neuroprotection for tauopathies via multiple signaling pathways
- Author
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Dennis J. Selkoe, Tasnim Mushannen, Rachid El Fatimy, Zhicheng Chen, Darrick T. Balu, Adam Cantlon, Abdallah Elkhal, Shaomin Li, Zhiyun Wei, Dominic M. Walsh, Rosalia Rabinovsky, Anna M. Krichevsky, Kai-Christian Sonntag, and Sree Gongala
- Subjects
0301 basic medicine ,Amyloid ,Primary Cell Culture ,Excitotoxicity ,Glutamic Acid ,Mice, Transgenic ,tau Proteins ,medicine.disease_cause ,Neuroprotection ,Pathology and Forensic Medicine ,Mice ,03 medical and health sciences ,Cellular and Molecular Neuroscience ,mental disorders ,Neurites ,medicine ,Animals ,Humans ,Neurodegeneration ,Non-coding RNA ,Caspase ,Neurons ,Original Paper ,Amyloid beta-Peptides ,Cell Death ,biology ,Glutamate receptor ,MicroRNA ,Long-term potentiation ,medicine.disease ,Cell biology ,MicroRNAs ,030104 developmental biology ,Tauopathies ,Mutation ,Nerve Degeneration ,biology.protein ,RNA, Long Noncoding ,Neurology (clinical) ,Signal transduction ,Protein Processing, Post-Translational ,Alzheimer’s disease ,Signal Transduction - Abstract
MicroRNAs (miRNA) regulate fundamental biological processes, including neuronal plasticity, stress response, and survival. Here, we describe a neuroprotective function of miR-132, the miRNA most significantly downregulated in neurons in Alzheimer’s disease. We demonstrate that miR-132 protects primary mouse and human wild-type neurons and more vulnerable Tau-mutant neurons against amyloid β-peptide (Aβ) and glutamate excitotoxicity. It lowers the levels of total, phosphorylated, acetylated, and cleaved forms of Tau implicated in tauopathies, promotes neurite elongation and branching, and reduces neuronal death. Similarly, miR-132 attenuates PHF-Tau pathology and neurodegeneration, and enhances long-term potentiation in the P301S Tau transgenic mice. The neuroprotective effects are mediated by direct regulation of the Tau modifiers acetyltransferase EP300, kinase GSK3β, RNA-binding protein Rbfox1, and proteases Calpain 2 and Caspases 3/7. These data suggest miR-132 as a master regulator of neuronal health and indicate that miR-132 supplementation could be of therapeutic benefit for the treatment of Tau-associated neurodegenerative disorders. Electronic supplementary material The online version of this article (10.1007/s00401-018-1880-5) contains supplementary material, which is available to authorized users.
- Published
- 2018
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- View/download PDF
135. Nanostructured graphene for nanoscale electron paramagnetic resonance spectroscopy
- Author
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Rachael L. Myers-Ward, James Hunt, Joris van Slageren, D. Kurt Gaskill, Ivan Nemec, Petr Neugebauer, Raphael Marx, Paola Barbara, Abdel El Fatimy, Randolph E. Elmquist, Mattias Kruskopf, Luke St. Marie, Yanfei Yang, and Jakub Hrubý
- Subjects
Electron paramagnetic resonance spectroscopy ,Materials science ,Graphene ,graphene ,electron spin resonance ,Nanotechnology ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,01 natural sciences ,7. Clean energy ,Atomic and Molecular Physics, and Optics ,0104 chemical sciences ,law.invention ,Quantum dot ,law ,General Materials Science ,molecular magnets ,0210 nano-technology ,Hot electron ,Nanoscopic scale - Abstract
The opening of a quantum confinement gap in nanostructured graphene yields extremely sensitive photodetectors, with electrical noise equivalent power lower than 10−15 W Hz−0.5 at temperatures below 3 K, for detection of radiation in a very broad frequency range, including ultraviolet, visible and terahertz. Here we demonstrate the operation of these detectors in the presence of magnetic field as high as 7 T, paving the way to in situ spectroscopy of molecular nanomagnets.
- Published
- 2020
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- View/download PDF
136. Targeting miR-155 restores abnormal microglia and attenuates disease in SOD1 mice
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Camille Doykan, Steven P. Gygi, Robert Lawson, Pauline M. Wu, Oleg Butovsky, Rachid El Fatimy, James D. Berry, Gopal Murugaiyan, David J. Greco, Mark P. Jedrychowski, Howard L. Weiner, Olga Kiner, Merit Cudkowicz, Hans Lassmann, Matthew P. Frosch, Nathalie Pochet, Susanne Krasemann, Zain Fanek, Anna M. Krichevsky, and Ron Cialic
- Subjects
Microglia ,biology ,business.industry ,animal diseases ,Transgene ,SOD1 ,nutritional and metabolic diseases ,Hippocampus ,Transforming growth factor beta ,medicine.disease ,nervous system diseases ,miR-155 ,medicine.anatomical_structure ,Neurology ,microRNA ,Immunology ,medicine ,biology.protein ,Cancer research ,Neurology (clinical) ,Amyotrophic lateral sclerosis ,business - Abstract
OBJECTIVE To investigate miR-155 in the SOD1 mouse model and human sporadic and familial amyotrophic lateral sclerosis (ALS).
- Published
- 2014
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137. Ambient effects on photogating in MoS2 photodetectors
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Eli R Adler, Yijing Liu, Luke St. Marie, Paola Barbara, Peize Han, Scott Melis, Edward Van Keuren, and Abdel El Fatimy
- Subjects
Materials science ,FOS: Physical sciences ,chemistry.chemical_element ,Photodetector ,Bioengineering ,02 engineering and technology ,010402 general chemistry ,01 natural sciences ,Oxygen ,Responsivity ,Transition metal ,Desorption ,Mesoscale and Nanoscale Physics (cond-mat.mes-hall) ,Molecule ,General Materials Science ,Electrical and Electronic Engineering ,Condensed Matter - Mesoscale and Nanoscale Physics ,business.industry ,Mechanical Engineering ,Response time ,General Chemistry ,021001 nanoscience & nanotechnology ,0104 chemical sciences ,Wavelength ,chemistry ,Mechanics of Materials ,Optoelectronics ,0210 nano-technology ,business - Abstract
Atomically thin transition metal dichalcogenides (TMDs) are ideal candidates for ultrathin optoelectronics that is flexible and semitransparent. Photodetectors based on TMDs show remarkable performance, with responsivity and detectivity higher than 10^3 A/W and 10^12 Jones, respectively, but they are plagued by response times as slow as several tens of seconds. Although it is well established that gas adsorbates such as water and oxygen create charge traps and significantly increase both the responsivity and the response time, the underlying mechanism is still unclear. Here we study the influence of adsorbates on MoS2 photodetectors under ambient conditions, vacuum and illumination at different wavelengths. We show that, for wavelengths sufficiently short to excite electron-hole pairs in the MoS2, light illumination causes desorption of water and oxygen molecules. The change in the molecular gating provided by the physisorbed molecules is the dominant contribution to the device photoresponse in ambient conditions.
- Published
- 2019
- Full Text
- View/download PDF
138. Nanostructured epitaxial graphene for ultra-broadband optoelectronic detectors (Conference Presentation)
- Author
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El Fatimy, Abdel, primary, St. Marie, Luke, additional, Nath, Anindya, additional, Don Kong, Byoung, additional, Boyd, Anthony K., additional, Myers-Ward, Rachael L., additional, Daniels, Kevin M., additional, Jadidi, M. Mehdi, additional, Murphy, Thomas E., additional, Gaskill, D. Kurt, additional, and Barbara, Paola, additional
- Published
- 2018
- Full Text
- View/download PDF
139. AlGaN/GaN high electron mobility transistors as a voltage-tunable room temperature terahertz sources.
- Author
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El Fatimy, A., Dyakonova, N., Meziani, Y., Otsuji, T., Knap, W., Vandenbrouk, S., Madjour, K., Théron, D., Gaquiere, C., Poisson, M. A., Delage, S., Prystawko, P., and Skierbiszewski, C.
- Subjects
- *
ELECTRON mobility , *TRANSISTORS , *ELECTRIC potential , *TERAHERTZ spectroscopy , *ELECTRON gas - Abstract
We report on room temperature terahertz generation by a submicron size AlGaN/GaN-based high electron mobility transistors. The emission peak is found to be tunable by the gate voltage between 0.75 and 2.1 THz. Radiation frequencies correspond to the lowest fundamental plasma mode in the gated region of the transistor channel. Emission appears at a certain drain bias in a thresholdlike manner. Observed emission is interpreted as a result of Dyakonov–Shur plasma wave instability in the gated two-dimensional electron gas. [ABSTRACT FROM AUTHOR]
- Published
- 2010
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140. Highly Sensitive MoS2 Photodetectors with Graphene Contacts
- Author
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Peize Han, Paola Barbara, Qing X. Wang, Abdel El Fatimy, Masahiro Ishigami, Nicholas Quirk, and Luke St. Marie
- Subjects
Photodetector ,FOS: Physical sciences ,Bioengineering ,02 engineering and technology ,Chemical vapor deposition ,010402 general chemistry ,7. Clean energy ,01 natural sciences ,law.invention ,law ,Monolayer ,Mesoscale and Nanoscale Physics (cond-mat.mes-hall) ,General Materials Science ,Electrical and Electronic Engineering ,Lithography ,Physics ,Condensed Matter - Mesoscale and Nanoscale Physics ,Graphene ,business.industry ,Mechanical Engineering ,General Chemistry ,021001 nanoscience & nanotechnology ,0104 chemical sciences ,Mechanics of Materials ,Electrode ,Optoelectronics ,Photolithography ,0210 nano-technology ,business ,Layer (electronics) - Abstract
Two-dimensional materials such as graphene and transition metal dichalcogenides (TMDs) are ideal candidates to create ultra-thin electronics suitable for flexible substrates. Although optoelectronic devices based on TMDs have demonstrated remarkable performance, scalability is still a significant issue. Most devices are created using techniques that are not suitable for mass production, such as mechanical exfoliation of monolayer flakes and patterning by electron-beam lithography. Here we show that large-area MoS2 grown by chemical vapor deposition and patterned by photolithography yields highly sensitive photodetectors, with record shot-noise-limited detectivities of 8.7 X 10^14 Jones in ambient condition and even higher when sealed with a protective layer. These detectivity values are higher than the highest values reported for photodetectors based on exfoliated MoS2. We study MoS2 devices with gold electrodes and graphene electrodes. The devices with graphene electrodes have a tunable band alignment and are especially attractive for scalable ultra-thin flexible optoelectronics.
- Published
- 2017
- Full Text
- View/download PDF
141. APOE signaling is a common pathway in microglia in neurodegeneration
- Author
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Krasemann, Susanne, Madore, Charlotte, O´Loughlin, Elaine, Cialic, Ron, Fanek, Zain, El Fatimy, Rachid, Greco, David, Smith, Scott, Tweet, Georg, Mazaheri, Fargol, Conde-Sanroman, Patricia, Garcias, Mar, Calcagno, Narghes, Glatzel, Markus, Worthmann, Anna, Heeren, Joerg, Lemere, Cynthia, Vanderburg, Charles, Heppner, Frank, Budnik, Bogdan, Ikezu, Tsuneya, Lassmann, Hans, Weiner, Howard, Ochando, Jordi, Haass, Christian, and Butovsky, Oleg
- Subjects
ddc: 610 ,610 Medical sciences ,Medicine - Abstract
Microglia are the immune cells of the brain. They play a dual role by promoting homeostatic functions in the healthy brain, but acquiring dysregulated properties in neurodegenerative and neuroinflammatory diseases. How this switch in the microglia phenotype is executed on the molecular level is still[for full text, please go to the a.m. URL], Joint-Meeting of the German Society for Neuropathology and Neuroanatomy (DGNN) and the Scandinavian Neuropathological Society (SNS)
- Published
- 2016
142. Downregulation of miR-132/212 impairs S-nitrosylation balance and induces tau phosphorylation in Alzheimer's disease
- Author
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Anna M. Krichevsky, Rachid El Fatimy, Andus Hon-Kit Wong, Tatiana Veremeyko, Yang Wang, Wei Cai, and Zhiyun Wei
- Subjects
0301 basic medicine ,Aging ,NOS1 ,Down-Regulation ,Gene Expression ,tau Proteins ,Nitric Oxide Synthase Type I ,Biology ,Nitric Oxide ,Nitric oxide ,03 medical and health sciences ,miR-132 ,chemistry.chemical_compound ,Mice ,0302 clinical medicine ,Downregulation and upregulation ,Alzheimer Disease ,medicine ,Animals ,Humans ,Phosphorylation ,Cells, Cultured ,Neurons ,Kinase ,General Neuroscience ,Neurodegeneration ,S-Nitrosylation ,medicine.disease ,Cell biology ,MicroRNAs ,030104 developmental biology ,medicine.anatomical_structure ,chemistry ,Nerve Degeneration ,Neurology (clinical) ,Neuron ,Geriatrics and Gerontology ,Neuroscience ,030217 neurology & neurosurgery ,Developmental Biology - Abstract
MicroRNA-132 is markedly downregulated in Alzheimer's disease (AD) and related tauopathies, and its levels are closely associated with tau pathology in AD. Whether and how miR-132 contributes to pathology in these neurodegenerative diseases remains unclear. Here, we show that miR-132 and its paralogue miR-212 directly regulate the expression of neuronal nitric oxide synthase (NOS1) through the primate-specific binding site. Inhibition of miR-132 in primary human neurons and neural cells leads to increased NOS1 levels and triggers excessive production of nitric oxide, followed by aberrant S-nitrosylation (SNO) of specific proteins associated with neurodegeneration and tau pathology, such as cyclin-dependent kinase 5, dynamin-related protein 1, and glyceraldehyde-3-phosphate dehydrogenase. This, in turn, increases tau phosphorylation at disease associated Ser396, Ser404, and Ser202 sites, and impairs neural viability. Our findings indicate that downregulation of miR-132/212 disturbs the balance of S-nitrosylation and induces tau phosphorylation in a NOS1-dependent way, and thereby may contribute to the pathogenesis of AD and other tauopathies.
- Published
- 2016
143. Genome Editing Reveals Glioblastoma Addiction to MicroRNA-10b
- Author
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Anna M. Krichevsky, Rachid El Fatimy, Erik J. Uhlmann, and Shruthi Subramanian
- Subjects
0301 basic medicine ,Cell Survival ,Brain tumor ,Biology ,03 medical and health sciences ,Mice ,Downregulation and upregulation ,Genome editing ,Glioma ,Cell Line, Tumor ,Drug Discovery ,Genetics ,medicine ,CRISPR ,Animals ,Humans ,Neoplastic transformation ,Molecular Biology ,Gene ,Cell Proliferation ,Pharmacology ,Gene Editing ,Base Sequence ,Brain Neoplasms ,Non-coding RNA ,medicine.disease ,nervous system diseases ,Gene Expression Regulation, Neoplastic ,Disease Models, Animal ,MicroRNAs ,030104 developmental biology ,Cell Transformation, Neoplastic ,Astrocytes ,Mutation ,Cancer research ,Molecular Medicine ,Original Article ,CRISPR-Cas Systems ,Glioblastoma ,RNA, Guide, Kinetoplastida - Abstract
Glioblastoma (GBM) brain tumor remains among the most lethal and incurable human diseases. Oncogenic microRNA-10b (miR-10b) is strongly and universally upregulated in GBM, and its inhibition by antisense oligonucleotides (ASOs) reduces the growth of heterogeneous glioma cells; therefore, miR-10b represents a unique therapeutic target for GBM. Here we explored the effects of miR-10b gene editing on GBM. Using the clustered regularly interspaced short palindromic repeats (CRISPR)-Cas9 system, we investigated effects of miR-10b gene editing on the growth of cultured human glioma cells, tumor-initiating stem-like cells, and mouse GBM xenografts, as well as the oncogene-induced transformation of normal astrocytes. We show that GBM is strictly "addicted" to miR-10b and that miR-10b gene ablation is lethal for glioma cell cultures and established intracranial tumors. miR-10b loss-of-function mutations lead to the death of glioma, but not other cancer cell lines. We have not detected escaped proliferative clones of GBM cells edited in the miR-10b locus. Finally, neoplastic transformation of normal astrocytes was abolished by the miR-10b-editing vectors. This study demonstrates the feasibility of gene editing for brain tumors in vivo and suggests virus-mediated miR-10b gene ablation as a promising therapeutic approach that permanently eliminates the key regulator essential for tumor growth and survival.
- Published
- 2016
144. A novel function for the survival motoneuron protein as a translational regulator
- Author
-
Lyndsay M. Murray, Helina Tadesse, Rachid El Fatimy, Olivier Biondi, Gabriel Sanchez, Jocelyn Côté, Alain Y. Dury, Rashmi Kothary, Frédéric Charbonnier, and Edouard W. Khandjian
- Subjects
Protein-Arginine N-Methyltransferases ,Tudor domain ,CARM1 ,animal diseases ,Mice, Transgenic ,RNA-binding protein ,SMN1 ,Biology ,Gene Expression Regulation, Enzymologic ,Muscular Atrophy, Spinal ,Mice ,SMN complex ,Genes, Reporter ,Untranslated Regions ,Genetics ,Animals ,Humans ,RNA, Messenger ,Molecular Biology ,Cells, Cultured ,Genetics (clinical) ,Luciferases, Renilla ,Messenger RNA ,Translation (biology) ,General Medicine ,Survival of Motor Neuron 1 Protein ,Molecular biology ,Protein Structure, Tertiary ,Up-Regulation ,nervous system diseases ,Cell biology ,Ribonucleoproteins ,Spinal Cord ,nervous system ,Polyribosomes ,Protein Biosynthesis ,Small nuclear RNA - Abstract
SMN1, the causative gene for spinal muscular atrophy (SMA), plays a housekeeping role in the biogenesis of small nuclear RNA ribonucleoproteins. SMN is also present in granular foci along axonal projections of motoneurons, which are the predominant cell type affected in the pathology. These so-called RNA granules mediate the transport of specific mRNAs along neurites and regulate mRNA localization, stability, as well as local translation. Recent work has provided evidence suggesting that SMN may participate in the assembly of RNA granules, but beyond that, the precise nature of its role within these structures remains unclear. Here, we demonstrate that SMN associates with polyribosomes and can repress translation in an in vitro translation system. We further identify the arginine methyltransferase CARM1 as an mRNA that is regulated at the translational level by SMN and find that CARM1 is abnormally up-regulated in spinal cord tissue from SMA mice and in severe type I SMA patient cells. We have previously characterized a novel regulatory pathway in motoneurons involving the SMN-interacting RNA-binding protein HuD and CARM1. Thus, our results suggest the existence of a potential negative feedback loop in this pathway. Importantly, an SMA-causing mutation in the Tudor domain of SMN completely abolished translational repression, a strong indication for the functional significance of this novel SMN activity in the pathology.
- Published
- 2012
- Full Text
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145. Mast Cells Regulate CD4+ T Cell Differentiation in Absence of Antigen Presentation
- Author
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Suresh Koduru, Anju Vasudevan, Virginia Camacho, Stefan G. Tullius, Haruhito Azuma, Hirofumi Uehara, Omid Akbari, Timm Heinbokel, Miguel Angel de la Fuente, Ionita Ghiran, Alexander J. Trachtenberg, Abdallah Elkhal, Hector Rodriguez Cetina Biefer, and Rachid El Fatimy
- Subjects
Transplantation ,Cd4 t cell ,Immunology ,Antigen presentation ,Mast (botany) ,Biology - Published
- 2018
- Full Text
- View/download PDF
146. Field effect transistors for terahertz imaging
- Author
-
Frederic Teppe, Abdel El Fatimy, S. Nadar, Nina Dyakonova, Dominique Coquillat, Irmantas Kašalynas, Krzysztof Karpierz, Jerzy Łusakowski, Gintaras Valušis, Wojciech Knap, Dalius Seliuta, and M. Białek
- Subjects
Materials science ,business.industry ,Terahertz radiation ,Transistor ,Detector ,Plasma ,Condensed Matter Physics ,Plasma oscillation ,law.invention ,Terahertz spectroscopy and technology ,Micrometre ,law ,Optoelectronics ,Field-effect transistor ,business - Abstract
Resonant frequencies of the two-dimensional plasma in field effect transistors (FETs) increase with the reduction of the channel dimensions and can reach the terahertz (THz) range for micrometer and sub-micrometer channel lengths. Nonlinearity of the gated electron gas in the transistor channel can be used for the detection of THz radiation. The possibility of tuneable narrow band detection in sub-THz and THz range, related to plasma resonances, has been demonstrated for nanometre gate length transistors at cryogenic temperatures. At room temperatures the plasma oscillations are usually strongly damped, but field effect transistors can still operate as an efficient broadband detectors in the THz range. We present an overview of experimental results on THz detection by field effect transistors made of III-V and Si materials, The material issue is discussed and first room applications of FETs for imaging at frequencies above 1 THz are demonstrated. (© 2009 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim)
- Published
- 2009
- Full Text
- View/download PDF
147. SEASONAL VARIATION AND ANTIFUNGAL ACTIVITIES OF METHANOLIC ALGAL EXTRACTS OF SOME DICTYOTACEAE OF BENGHAZI COASTS, LIBYA
- Author
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Massoud M. Godeh, Eisha S. El-Fatimy, and Alaa A. Said
- Subjects
Antifungal ,biology ,medicine.drug_class ,Aspergillus niger ,Padina pavonica ,Aspergillus flavus ,Seasonality ,biology.organism_classification ,medicine.disease ,Fusarium oxysporum ,Botany ,medicine ,Dictyotaceae ,Fusarium solani - Abstract
The results evaluated the efficiency of all used algal extracts with high significant differences and could be arranged dissentingly as Dictyota linearis > Dictyota dichotoma var. dichotoma > Dictyopteris membranacea > Padina pavonica (Dictyotaceae). The methanolic used algal extracts of spring and summer were more efficient without significant difference while the algal extractions of autumn came at the second rank with significant difference. The used fungi were Aspergillus niger, Aspergillus flavus, Penicilium parasiticus, Fusarium oxysporum, Fusarium solani and Candida utilis. All of them were affected by all used algal extracts without significant difference.
- Published
- 2009
- Full Text
- View/download PDF
148. Highly sensitive MoS2photodetectors with graphene contacts
- Author
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Han, Peize, primary, St. Marie, Luke, additional, Wang, Qing X, additional, Quirk, Nicholas, additional, El Fatimy, Abdel, additional, Ishigami, Masahiro, additional, and Barbara, Paola, additional
- Published
- 2018
- Full Text
- View/download PDF
149. Coding and noncoding landscape of extracellular RNA released by human glioma stem cells
- Author
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Wei, Zhiyun, primary, Batagov, Arsen O., additional, Schinelli, Sergio, additional, Wang, Jintu, additional, Wang, Yang, additional, El Fatimy, Rachid, additional, Rabinovsky, Rosalia, additional, Balaj, Leonora, additional, Chen, Clark C., additional, Hochberg, Fred, additional, Carter, Bob, additional, Breakefield, Xandra O., additional, and Krichevsky, Anna M., additional
- Published
- 2017
- Full Text
- View/download PDF
150. The TREM2-APOE Pathway Drives the Transcriptional Phenotype of Dysfunctional Microglia in Neurodegenerative Diseases
- Author
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Krasemann, Susanne, primary, Madore, Charlotte, additional, Cialic, Ron, additional, Baufeld, Caroline, additional, Calcagno, Narghes, additional, El Fatimy, Rachid, additional, Beckers, Lien, additional, O’Loughlin, Elaine, additional, Xu, Yang, additional, Fanek, Zain, additional, Greco, David J., additional, Smith, Scott T., additional, Tweet, George, additional, Humulock, Zachary, additional, Zrzavy, Tobias, additional, Conde-Sanroman, Patricia, additional, Gacias, Mar, additional, Weng, Zhiping, additional, Chen, Hao, additional, Tjon, Emily, additional, Mazaheri, Fargol, additional, Hartmann, Kristin, additional, Madi, Asaf, additional, Ulrich, Jason D., additional, Glatzel, Markus, additional, Worthmann, Anna, additional, Heeren, Joerg, additional, Budnik, Bogdan, additional, Lemere, Cynthia, additional, Ikezu, Tsuneya, additional, Heppner, Frank L., additional, Litvak, Vladimir, additional, Holtzman, David M., additional, Lassmann, Hans, additional, Weiner, Howard L., additional, Ochando, Jordi, additional, Haass, Christian, additional, and Butovsky, Oleg, additional
- Published
- 2017
- Full Text
- View/download PDF
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