199 results on '"Dandan Fan"'
Search Results
102. Region of Interest Localization Methods for Publicly Available Palmprint Databases
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David Zhang, Zhaoqun Li, Xu Liang, and Dandan Fan
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021110 strategic, defence & security studies ,Information retrieval ,Computer science ,Region of interest ,InformationSystems_INFORMATIONSTORAGEANDRETRIEVAL ,0211 other engineering and technologies ,0202 electrical engineering, electronic engineering, information engineering ,020201 artificial intelligence & image processing ,02 engineering and technology ,GeneralLiterature_REFERENCE(e.g.,dictionaries,encyclopedias,glossaries) - Abstract
So far, there exist many publicly available palmprint databases. However, not all of them have provided the corresponding region of interest (ROI) images. If everyone uses their own extracted ROI images for performance testing, the final accuracy is not strictly comparable. Since ROI localization is the critical stage of palmprint recognition. The location precision has a significant impact on the final recognition accuracy, especially in unconstrained scenarios. This problem has limited the applications of palmprint recognition. However, many currently published surveys only focus on feature extraction and classification methods. Throughout these years, many new ROI localization methods have been proposed. In this chapter, we will group the existing ROI localization methods into different categories, analyze their basic ideas, reproduce some of the codes, make comparisons of their performances, and provide further directions. We hope this could be a useful reference for further research.
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- 2021
103. Brain damage caused by chlorfenapyr poisoning: a case report and literature review
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Dandan Fan and Fanglan Yao
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business.industry ,medicine.medical_treatment ,Unconsciousness ,Brain damage ,Chlorfenapyr ,medicine.disease ,Hemoperfusion ,Gastric lavage ,Leukoencephalopathy ,chemistry.chemical_compound ,chemistry ,Anesthesia ,Medicine ,Ingestion ,Hernia ,medicine.symptom ,business - Abstract
Introduction: Chlorfenapyr poisoning is uncommon, but fatal, and is often ignored. Chlorfenapyr inhibits ATP production in the mitochondrial of lipid-rich organs such as the brain. The initial symptoms of chlorfenapyr poisoning are not serious and are usually ignored; fever and unconsciousness are the main signs. Patients often die of brain damage, and survivors often present toxic leukoencephalopathy. Case report: We report a case of a 15-year-old female who swallowed 10 mL of 10%chlorfenapyr, and was subjected to gastric lavage one hour after ingestion. The patient felt no discomfort on the first and second day after lavage and went to school. On the third day, the patient complained of a headache and rested at home. On the fourth day, the patient still complained of headache, and the condition progressed to confusion and fever; therefore, the patient was admitted to the emergency room and underwent hemoperfusion. Cerebral CT revealed diffuse brain edema. The patient died on the fourth day because of central fever, brain hernia, and brain dysfunction. Conclusion: Chlorfenapyr poisoning is fatal, even in small doses. Patients suspected of chlorfenapyr poisoning should be closely observed and promptly treated by hemoperfusion.
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- 2021
104. Spectral radius and $[a,b]$-factors in graphs
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Dandan Fan, Huiqiu Lin, and Hongliang Lu
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FOS: Mathematics ,Discrete Mathematics and Combinatorics ,Mathematics - Combinatorics ,Combinatorics (math.CO) ,05C50 ,Theoretical Computer Science - Abstract
An $[a,b]$-factor of a graph $G$ is a spanning subgraph $H$ such that $a\leq d_{H}(v)\leq b$ for each $v\in V(G)$. In this paper, we provide spectral conditions for the existence of an odd $[1,b]$-factor in a connected graph with minimum degree $\delta$ and the existence of an $[a,b]$-factor in a graph, respectively. Our results generalize and improve some previous results on perfect matchings of graphs. For $a=1$, we extend the result of O\cite{S.O} to obtain an odd $[1,b]$-factor and further improve the result of Liu, Liu and Feng\cite{W.L} for $a=b=1$. For $n\geq 3a+b-1$, we confirm the conjecture of Cho, Hyun, O and Park\cite{E.C}. We conclude some open problems in the end., Comment: 14 pages
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- 2021
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105. Identification of microRNA-9 linking the effects of childhood maltreatment on depression using amygdala connectivity
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Zan Wang, Honghong Yao, Dandan Fan, Qing Wang, Haisan Zhang, Xinyi Liu, Chunming Xie, Zhijun Zhang, Hongxing Zhang, Cancan He, and Ying Bai
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Oncology ,Male ,Support Vector Machine ,Amygdala functional connectivity ,Severity of Illness Index ,0302 clinical medicine ,Limbic system ,Neural Pathways ,Limbic System ,Depression (differential diagnoses) ,Adult Survivors of Child Abuse ,05 social sciences ,Middle Aged ,Amygdala ,Magnetic Resonance Imaging ,medicine.anatomical_structure ,Neurology ,Interactive effects ,Major depressive disorder ,Female ,Adult ,medicine.medical_specialty ,Cognitive Neuroscience ,Prefrontal Cortex ,microRNA-9 ,behavioral disciplines and activities ,050105 experimental psychology ,lcsh:RC321-571 ,03 medical and health sciences ,Young Adult ,Childhood maltreatment ,Internal medicine ,microRNA ,mental disorders ,medicine ,Humans ,0501 psychology and cognitive sciences ,Resting-state fMRI ,Risk factor ,lcsh:Neurosciences. Biological psychiatry. Neuropsychiatry ,Depressive Disorder, Major ,Mediation Analysis ,Resting state fMRI ,business.industry ,Functional Neuroimaging ,medicine.disease ,Neostriatum ,MicroRNAs ,Case-Control Studies ,business ,030217 neurology & neurosurgery - Abstract
Childhood maltreatment (CM) is regarded as an important risk factor for major depressive disorder (MDD). However, the neural links corresponding to the process of early CM experience producing brain alterations and then leading to depression later remain unclear. To explore the neural basis of the effects of CM on MDD and the potential role of microRNA-9 (miR-9) in these processes, we recruited 40 unmedicated MDD patients and 34 healthy controls (HCs) to complete resting-state fMRI scans and peripheral blood miR-9 tests. The neural substrates of CM, miR-9, and depression, as well as their interactive effects on intrinsic amygdala functional connectivity (AFC) networks were investigated in MDD patients. Two-step mediation analysis was separately employed to explore whether AFC strength mediates the association among CM severity, miR-9 levels, and depression. A support vector classifier (SVC) model of machine learning was used to distinguish MDD patients from HCs. MDD patients showed higher miR-9 levels that were negatively correlated with CM scores and depressive severity. Overlapping effects of CM, miR-9, and depressive severity on bilateral AFC networks in MDD patients were primarily located in the prefrontal-striatum pathway and limbic system. The connection of amygdala to prefrontal-limbic circuits could mediate the effects of CM severity on the miR-9 levels, as well as the impacts of miR-9 levels on the severity of depression in MDD patients. Furthermore, the SVC model, which integrated miR-9 levels, CM severity, and AFC strength in prefrontal-limbic regions, had good power in differentiating MDD patients from HCs (accuracy 85.1%). MiR-9 may play a crucial role in the process of CM experience-produced brain changes targeting prefrontal-limbic regions and that subsequently leads to depression. The present neuroimaging-epigenetic results provide new insight into our understanding of MDD pathophysiology.
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- 2021
106. Research on Power Control Algorithm in the Multi-target TT&C System
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Jianglai Xu, Yiwen Chen, Lihong Lv, Zheshuai Zhou, and Dandan Fan
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Multi target ,Power control algorithm ,Relay ,law ,System capacity ,Computer science ,Control theory ,Limit (music) ,Signal ,law.invention ,Power control ,Power (physics) - Abstract
In the multi-target TT&C system of relay satellite, due to the different distances between users and satellites, the strong signals of near users will restrain the weak signals of long-distance users and reduce the system capacity. This paper studies the power control algorithm in the reverse link of multi-target TT&C system. Specifically, the signal model of multi-target TT&C system is established, and two power adjustment algorithms, namely fixed step adjustment algorithm and adaptive step adjustment algorithm, are analyzed. The adaptive step adjustment algorithm is improved, and the upper limit of step adjustment is introduced. The simulation results show that the algorithm is effective in multi-target TT&C system.
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- 2021
107. miR-17-5p Combined with Epirubicin Inhibits the Progression of Breast Cancer Cells
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Jiang Du, Lingling Zhao, Zhongjian Zhu, Dandan Fan, and Yuanyu Zhao
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Text mining ,business.industry ,Mir 17 5p ,medicine ,Cancer research ,Breast cancer cells ,business ,Epirubicin ,medicine.drug - Abstract
Background: Breast cancer is the most common malignant tumor for women, which has been ranked first in women’ s cancer-related death. The objectives of the study are to uncover the underlying mechanisms of combination therapy of epirubicin with miR-17-5p in breast cancer. Methods: The expression levels of miR-17-5p were determined by quantitative RT-PCR. The survival rate of MCF-7 cell was detected respectively by MTT assay. The expression levels of miR-17-5p in MCF-7 cell was tested respectively with Ep via quantitative RT-PCR. miR-17-5p was to be transected with miR-17-5p mimic and negative control of miR-17-5p mimic (NC). Quantitative RT-PCR, MTT assay, flow cytometry assay, western blot for the proliferation and apoptosis related proteins were performed to determine the function of miR-17-5p in breast cancer cells. The bioinformatic programs TargetScan was used to predict the targets for miR-17-5p. Luciferase reporter gene assay system was used to validate and determine the targets of miR-17-5p. The relation between targets protein levels in breast cancer cells was investigated by western blot. Results: The expression levels of miR-17-5p was associated with the breast cancer tissues. The levels of miR-17-5p was down-regulated in breast cancer tissues and cells. Ep could inhibit viability of cancer cells in a concentration dependent manner and promote the expression of miR-17-5p in breast cancer cell lines. Over-expression of miR-17-5p induced cell apoptosis and upregulated the expression of p53, p21 and p27. miR-17-5p co-cultured with Ep is better than the other groups. The relative luciferase activity revealed that STAT3 was a potential target gene of miR-17-5p. Conclusions: Our work will prove that epirubicin regulated the expression of miR-17-5p to strengthen this effect of epirubicin and inhibited the progression of breast cancer.
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- 2020
108. Optimization of the Fermentation Process of Mulberry Juice by Lactic Acid Bacteria and Changes in Functional Components and Antioxidant Activity during Fermentation
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Huan TIAN, Longying PEI, Abdureheman BUHAILIQIEMU ·, Dandan FANG, Luxi JIANG, Qian LI, Kun ZHANG, Jing PENG, and Xue SHEN
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mulberry ,lactic acid bacteria ,fermentation process ,functionality ,antioxidant activity ,Food processing and manufacture ,TP368-456 - Abstract
Using mulberry as raw material, single and mixed strains of Lactobacillus plantarum and Bifidobacterium longum were used to ferment mulberry juice, and single-factor and response surface tests were used to investigate the optimal fermentation process of fermented mulberry juice, and to determine and analyze the functional components (total flavonoids, total anthocyanins, total phenols) and antioxidant activities (ABTS+ free radical scavenging rate, DPPH free radical scavenging rate, hydroxyl radical scavenging rate, total antioxidant capacity), etc. The results showed that the optimal fermentation process for fermented mulberry juice was 0.06% strain addition, initial pH6.1, fermentation temperature 37 ℃, and 0.09% oligofructose addition. The fermentation of lactic acid bacteria improved the functional components and antioxidant activity of fermented mulberry juice. Compared with single strain and mixed strain, the fermentation of mixed strain significantly increased (P
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- 2023
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109. Altered Regional Cerebral Blood Flow and Brain Function Across the Alzheimer's Disease Spectrum: A Potential Biomarker
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Qianqian Zhang, Qing Wang, Cancan He, Dandan Fan, Yao Zhu, Feifei Zang, Chang Tan, Shaoke Zhang, Hao Shu, Zhijun Zhang, Haixia Feng, Zan Wang, and Chunming Xie
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resting-state functional MRI ,Aging ,medicine.medical_specialty ,Brain activity and meditation ,Cognitive Neuroscience ,cerebral blood flow ,Precuneus ,lcsh:RC321-571 ,Neuroimaging ,Internal medicine ,Medicine ,Cognitive decline ,lcsh:Neurosciences. Biological psychiatry. Neuropsychiatry ,Original Research ,business.industry ,Neuropsychology ,Alzheimer's disease ,arterial spin labeling ,amplitude of low frequency fluctuation ,medicine.anatomical_structure ,nervous system ,Cerebral blood flow ,Posterior cingulate ,Cardiology ,regional homogeneity ,Biomarker (medicine) ,business ,psychological phenomena and processes ,Neuroscience - Abstract
Objective: To investigate variation in the characteristics of regional cerebral blood flow (rCBF), brain activity, and intrinsic functional connectivity (FC) across the Alzheimer's disease spectrum (ADS).Methods: The study recruited 20 individuals in each of the following categories: Alzheimer's disease (AD), mild cognitive impairment (MCI), subjective cognitive decline (SCD), and healthy control (HC). All participants completed the 3.0T resting-state functional MRI (rs-fMRI) and arterial spin labeling scans in addition to neuropsychological tests. Additionally, the normalized CBF, regional homogeneity (ReHo), and amplitude of low-frequency fluctuation (ALFF) of individual subjects were compared in the ADS. Moreover, the changes in intrinsic FC were investigated across the ADS using the abnormal rCBF regions as seeds and behavioral correlations. Finally, a support-vector classifier model of machine learning was used to distinguish individuals with ADS from HC.Results: Compared to the HC subjects, patients with AD showed the poorest level of rCBF in the left precuneus (LPCUN) and right middle frontal gyrus (RMFG) among all participants. In addition, there was a significant decrease in the ALFF in the bilateral posterior cingulate cortex (PCC) and ReHo in the right PCC. Moreover, RMFG- and LPCUN-based FC analysis revealed that the altered FCs were primarily located in the posterior brain regions. Finally, a combination of altered rCBF, ALFF, and ReHo in posterior cingulate cortex/precuneus (PCC/PCUN) showed a better ability to differentiate ADS from HC, AD from SCD and MCI, but not MCI from SCD.Conclusions: The study demonstrated the significance of an altered rCBF and brain activity in the early stages of ADS. These findings, therefore, present a potential diagnostic neuroimaging-based biomarker in ADS. Additionally, the study provides a better understanding of the pathophysiology of AD.
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- 2020
110. Co-Expression of Mitochondrial Genes and ACE2 in Cornea Involved in COVID-19
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Jianzhong Su, Zhengbo Xue, Dandan Fan, Jian Yuan, and Jia Qu
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0301 basic medicine ,Mitochondrial DNA ,Pneumonia, Viral ,ACE2 ,Mitochondrion ,Biology ,Peptidyl-Dipeptidase A ,Interactome ,Cell Line ,Pathogenesis ,Cornea ,03 medical and health sciences ,Betacoronavirus ,0302 clinical medicine ,medicine ,Humans ,mitochondrial gene ,Gene ,Pandemics ,Regulation of gene expression ,Immunology and Microbiology ,Innate immune system ,SARS-CoV-2 ,COVID-19 ,Cell biology ,030104 developmental biology ,medicine.anatomical_structure ,Genes, Mitochondrial ,Gene Expression Regulation ,030220 oncology & carcinogenesis ,RNA ,Coronavirus Infections - Abstract
Purpose: The coronavirus disease 2019 (COVID-19) pandemic severely challenges public health and necessitates the need for increasing our understanding of COVID-19 pathogenesis, especially host factors facilitating virus infection and propagation. The aim of this study was to investigate key factors for cellular susceptibility to severe acute respiratory syndrome-coronavirus 2 (SARS-CoV-2) infection in the ocular surface cells. Methods: We combined co-expression and SARS-CoV-2 interactome network to predict key genes at COVID-19 in ocular infection based on the premise that genes underlying a disease are often functionally related and functionally related genes are often co-expressed. Results: The co-expression network was constructed by mapping the well-known angiotensin converting enzyme (ACE2), TMPRSS2, and host susceptibility genes implicated in COVID-19 genomewide association study (GWAS) onto a cornea, retinal pigment epithelium, and lung. We found a significant co-expression module of these genes in the cornea, revealing that cornea is potential extra-respiratory entry portal of SARS-CoV-2. Strikingly, both co-expression and interaction networks show a significant enrichment in mitochondrial function, which are the hub of cellular oxidative homeostasis, inflammation, and innate immune response. We identified a corneal mitochondrial susceptibility module (CMSM) of 14 mitochondrial genes by integrating ACE2 co-expression cluster and SARS-CoV-2 interactome. The gene ECSIT, as a cytosolic adaptor protein involved in inflammatory responses, exhibits the strongest correlation with ACE2 in CMSM, which has shown to be an important risk factor for SARS-CoV-2 infection and prognosis. Conclusions: Our co-expression and protein interaction network analysis uncover that the mitochondrial function related genes in cornea contribute to the dissection of COVID-19 susceptibility and potential therapeutic interventions.
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- 2020
111. Alterations of core structural network connectome associated with suicidal ideation in major depressive disorder patients
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Chunming Xie, Xinyi Liu, Haisan Zhang, Feifei Zang, Cancan He, Hongxing Zhang, Dandan Fan, Yao Zhu, and Zhijun Zhang
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Neurosciences. Biological psychiatry. Neuropsychiatry ,Article ,Suicidal Ideation ,Cellular and Molecular Neuroscience ,Neuroimaging ,Neural Pathways ,medicine ,Connectome ,Humans ,Suicidal ideation ,Biological Psychiatry ,Default mode network ,Depressive Disorder, Major ,business.industry ,Depression ,Superior longitudinal fasciculus ,Neuropsychology ,Brain ,Cognition ,Diagnostic markers ,medicine.disease ,Magnetic Resonance Imaging ,White Matter ,Psychiatry and Mental health ,medicine.anatomical_structure ,Diffusion Tensor Imaging ,Major depressive disorder ,medicine.symptom ,business ,Neuroscience ,RC321-571 - Abstract
Suicide ideation (SI) is a most high-risk clinical sign for major depressive disorder (MDD). However, whether the rich-club network organization as a core structural network is associated with SI and how the related neural circuits are distributed in MDD patients remain unknown. Total 177 participants including 69 MDD patients with SI (MDDSI), 58 MDD without SI (MDDNSI) and 50 cognitively normal (CN) subjects were recruited and completed neuropsychological tests and diffusion-tensor imaging scan. The rich-club organization was identified and the global and regional topological properties of structural networks, together with the brain connectivity of specific neural circuit architectures, were analyzed. Further, the support vector machine (SVM) learning was applied in classifying MDDSI or MDDNSI from CN subjects. MDDSI and MDDNSI patients both exhibited disrupted rich-club organizations. However, MDDSI patients showed that the differential network was concentrated on the non-core low-level network and significantly destroyed betweeness centrality was primarily located in the regional non-hub regions relative to MDDNSI patients. The differential structural network connections involved the superior longitudinal fasciculus and the corpus callosum were incorporated in the cognitive control circuit and default mode network. Finally, the feeder serves as a potentially powerful indicator for distinguishing MDDSI patients from MDDNSI or CN subjects. The altered rich-club organization provides new clues to understand the underlying pathogenesis of MDD patients, and the feeder was useful as a diagnostic neuroimaging biomarker for differentiating MDD patients with or without SI.
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- 2020
112. Protein 4.1R affects photodynamic therapy for B16 melanoma by regulating the transport of 5-aminolevulinic acid
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Shuangshuang Guo, Zhenyu Ji, Qiaozhen Kang, Liping Dai, Dandan Fan, Yu Lu, Bowen Li, Xiaolin Zhang, Yaxin Guo, Liguo Zhang, Luyang Zhao, and Jingjing Liu
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0301 basic medicine ,Skin Neoplasms ,medicine.medical_treatment ,Melanoma, Experimental ,Photodynamic therapy ,Biology ,03 medical and health sciences ,Gene Knockout Techniques ,Mice ,0302 clinical medicine ,Immune system ,In vivo ,Cell Line, Tumor ,medicine ,Animals ,Humans ,Gene knockdown ,Melanoma ,Cancer ,Membrane Proteins ,Biological Transport ,Cell Biology ,Membrane transport ,medicine.disease ,Levulinic Acids ,Mice, Inbred C57BL ,Cytoskeletal Proteins ,030104 developmental biology ,HEK293 Cells ,Photochemotherapy ,030220 oncology & carcinogenesis ,Cancer research ,Skin cancer - Abstract
Melanoma is the most aggressive malignant tumor of skin cancer as it can grow rapidly and metastasize. Photodynamic therapy (PDT) is a promising cancer ablation method for skin tumors, although it lacks efficiency owing to factors such as tumor characteristics, delivery of photosensitizers, immune response in vivo etc. Extensive investigation of molecules that can potentially modulate treatment efficacy is required. Protein 4.1R is a cytoskeletal protein molecule. Previous studies have shown that protein 4.1R knockdown reduces PDT sensitivity in mouse embryonic fibroblast cells. However, the functional role of protein 4.1R in melanoma is unclear. In this study, we aimed to elucidate the effect of protein 4.1R on PDT for melanoma in mice and the mechanism of anti-tumor immunity. Our results indicated that CRISPR/Cas9-mediated protein 4.1R knockout promotes the proliferation, migration, and invasion of B16 cells. We further investigated the potential mechanism of protein 4.1R on tumor cell PDT sensitivity. Our results showed that protein 4.1R knockout reduced the expression of membrane transporters γ-aminobutyric acid transporter (GAT)-1 and (GAT)-2 in B16 cells, which affected 5-ALA transmembrane transport and reduced the efficiency of PDT on B16 cells. Protein 4.1R knockout downregulated the anti-tumor immune response triggered by PDT in vivo. In conclusion, our data suggest that protein 4.1R is an important regulator in PDT for tumors and may promote the progress and efficacy of melanoma treatment.
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- 2020
113. Machine learning-based integrative analysis of methylome and transcriptome identifies novel prognostic DNA methylation signature in uveal melanoma
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Meng Zhou, Jianzhong Su, Congcong Yan, Jia Qu, Dandan Fan, Ping Hou, and Siqi Bao
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Oncology ,Adult ,Male ,Uveal Neoplasms ,medicine.medical_specialty ,medicine.disease_cause ,Malignancy ,Disease-Free Survival ,Transcriptome ,Machine Learning ,03 medical and health sciences ,0302 clinical medicine ,Predictive Value of Tests ,Internal medicine ,medicine ,Humans ,Molecular Biology ,Melanoma ,030304 developmental biology ,Aged ,Aged, 80 and over ,0303 health sciences ,Proportional hazards model ,business.industry ,Gene Expression Profiling ,AZGP1 ,DNA, Neoplasm ,DNA Methylation ,Middle Aged ,medicine.disease ,Neoplasm Proteins ,Gene Expression Regulation, Neoplastic ,Survival Rate ,030220 oncology & carcinogenesis ,DNA methylation ,Cohort ,Female ,Carcinogenesis ,business ,Information Systems - Abstract
Uveal melanoma (UVM) is the most common primary intraocular human malignancy with a high mortality rate. Aberrant DNA methylation has rapidly emerged as a diagnostic and prognostic signature in many cancers. However, such DNA methylation signature available in UVM remains limited. In this study, we performed a genome-wide integrative analysis of methylome and transcriptome and identified 40 methylation-driven prognostic genes (MDPGs) associated with the tumorigenesis and progression of UVM. Then, we proposed a machine-learning-based discovery and validation strategy to identify a DNA methylation-driven signature (10MeSig) composing of 10 MDPGs (AZGP1, BAI1, CCDC74A, FUT3, PLCD1, S100A4, SCN8A, SEMA3B, SLC25A38 and SLC44A3), which stratified 80 patients of the discovery cohort into two risk subtypes with significantly different overall survival (HR = 29, 95% CI: 6.7–126, P
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- 2020
114. The mechanism of medial collateral ligament repair in knee osteoarthritis based on the TLR4/MyD88/NF-κB inflammatory signaling pathway
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Zhiyong, Li, Yu, Zou, Dandan, Fan, Wenlong, Zhang, Hongwei, Gao, Na, Ge, and Shaohua, Tian
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Cartilage, Articular ,Inflammation ,Male ,Medial Collateral Ligament, Knee ,NF-kappa B ,Osteoarthritis, Knee ,MyD88 ,NF-κB ,Rats ,Toll-Like Receptor 4 ,Inflammatory Factor ,Collateral Ligament ,Myeloid Differentiation Factor 88 ,Animals ,Original Article ,TLR4 ,Rats, Wistar ,Signal Transduction - Abstract
Objectives: To explore the role of medial collateral ligament repair in knee osteoarthritis based on TLR4/MyD88/NF-κ inflammatory signaling pathway. Methods: The modified Hulth method was used to establish models, which were divided into a repair group, a model group, and a sham operation group. The repair group was treated with medial ligament repair technology. Synovium and cartilage morphological changes were evaluated by hematoxylin-eosin staining to determine the degree of reparation. The cartilage was evaluated by the Mankin’s score, and inflammatory factors in cartilage tissues were determined by ELISA. The changes in TLR4, MyD88, and NF-κB levels were analyzed using the real-time quantitative PCR and Western blot assays. Results: The synovial and cartilage damages in the repair group and the sham operation group were significantly alleviated compared to the model group. The Mankin’s score of the model group was significantly lower than the other two groups. The expression of inflammatory factors in the repair group and the sham operation group were significantly lower than in the model group. The expressions of those factors in the repair group and the model group were higher than those in the model group. Conclusions: Medial ligament repair can improve the cartilage morphology and delay the development and progression of knee osteoarthritis by inhibiting the TLR4/MyD88/NF-κB signaling pathway.
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- 2020
115. Endocytosis-pathway polygenic scores affects the hippocampal network connectivity and individualized identification across the high-risk of Alzheimer's disease
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Yao, Zhu, Feifei, Zang, Xinyi, Liu, Dandan, Fan, Qianqian, Zhang, Qingguo, Ren, and Chunming, Xie
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Alzheimer Disease ,Humans ,Cognitive Dysfunction ,Hippocampus ,Magnetic Resonance Imaging ,Endocytosis - Abstract
The neural mechanisms underlying the polygenic effects of the endocytosis pathway on the brain function of Alzheimer's Disease (AD) remain unclear, especially in the prodromal stages of AD from early mild cognitive impairment (EMCI) to late mild cognitive impairment (LMCI). We used an imaging genetic approach to investigate the polygenic effects of the endocytosis pathway on the hippocampal network across the prodromal stages of AD. The subjects' data were selected from the Alzheimer's Disease Neuroimaging Initiative. Hippocampal volumes were examined in subjects of cognitive normal (CN), EMCI and LMCI groups. Multivariate linear regression analysis was employed to measure the effects of disease and endocytosis-based multilocus genetic risk scores (MGRS) on the hippocampal network which was constructed using the bilateral hippocampal regions. We identified hippocampal volumes in LMCI group were smaller than those in CN and EMCI groups. Endocytosis-based MGRS was widely influenced the neural structures within the hippocampal network, especially in the prefrontal-occipital regions and striatum. Compared to low endocytosis-based MGRS carriers, high MGRS carriers showed the opposite trajectory of hippocampal network functional connectivity (FC) across the prodromal stages of AD. Further, a model composed of selected hippocampal FCs and hippocampal volume yielded strong classification powers of EMCI and LMCI. These findings expand our understanding of the pathophysiology of polygenic effects underlying brain network in the prodromal stages of AD.
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- 2020
116. Co-expression of Mitochondrial Genes and ACE2 in Cornea Involved in COVID-19 Infection
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Dandan Fan, Jianzhong Su, Jia Qu, Jian Yuan, and Zhengbo Xue
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Pathogenesis ,Mitochondrial DNA ,Innate immune system ,medicine.anatomical_structure ,Cornea ,medicine ,Signal transducing adaptor protein ,Inflammation ,medicine.symptom ,Biology ,Gene ,Interactome ,Cell biology - Abstract
The Coronavirus disease 2019 (COVID-19) pandemic severely challenges public health and necessitates the need for increasing our understanding of COVID-19 pathogenesis, especially host factors facilitating virus infection and propagation. Here, the co-expression network was constructed by mapping the well-known ACE2, TMPRSS2 and host susceptibility genes implicated in COVID-19 GWAS onto a cornea, retinal pigment epithelium and lung. We found a significant co-expression module of these genes in the cornea, revealing that cornea is potential extra-respiratory entry portal of SARS-CoV-2. Strikingly, both co-expression and interaction networks show a significant enrichment in mitochondrial function, which are the hub of cellular oxidative homeostasis, inflammation and innate immune response. We identified a corneal mitochondrial susceptibility module (CMSM) of 14 mitochondrial genes by integrating ACE2 co-expression cluster and SARS-CoV-2 interactome. Gene ECSIT, as a cytosolic adaptor protein involved in inflammatory responses, exhibits the strongest correlation with ACE2 in CMSM, which has shown to be an important risk factor for SARS-CoV-2 infection and prognosis. Our co-expression and protein interaction network analysis uncover that the mitochondrial function related genes in cornea contribute to the dissection of COVID-19 susceptibility and potential therapeutic interventions.
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- 2020
117. The effect of superheat on the nucleation undercooling of metallic melts
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Junfeng Xu and Dandan Fan
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- 2020
118. The longitudinal association of smoking behaviors with obesity risk among Chinese adults from the China Health and Nutrition Survey 1991–2015
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Jian Zhao, Dandan Fan, Chang Su, Huijun Wang, and Bing Zhang
- Abstract
Background Present study aims to longitudinal explore independent association of smoking status and cigarette consumption with general obesity and abdominal among Chinese adults by gender. Methods This study include 75,348 adults (35,907 males and 39,441 females) aged 18-65 years from the longitudinal data of China Health and Nutrition Survey (CHNS, 1991-2015). Multilevel mixed-effects linear and logistic regression models were performed for association analysis. Results Among males and females, heavy smokers (> 25 cigarette/d) increased from 5.5% and 0.05% in 1991 to 6.8% and 0.1% in 2015, respectively ( p < 0.001). After controlling for confounding factors, the net effect on male light (1–14 cigarette/d), moderate (15–24 cigarette/d), and heavy smokers was a significant decrease of 0.40 kg/m 2 (β: −0.40, 95% CI: − 0.48, −0.31), 0.51 kg/m 2 (β: −0.51, 95% CI: −0.60, −0.43), and 0.29 kg/m 2 (β: −0.29, 95% CI: −0.43, −0.14) in BMI, respectively. From moderate and light smokers to nonsmokers were linked with significant WC decreases of 0.87 cm (β: −0.87, 95% CI: −1.14, −0.58) and 0.86 cm (β: −0.87, 95% CI: −1.12, −0.59) in males and 1.58 cm (β: −1.58, 95% CI: −2.94, −0.22) and 1.37 cm (β: −1.37, 95% CI: −2.13, −0.59) in females, respectively. The odds ratio (95% CIs) for general obesity in males were 0.72 (0.65–0.81) for light smokers and 0.68 (0.61–0.76) for moderate smokers compared with nonsmokers. Similarly, the odds ratio (95% CIs) for abdominal obesity in males were 0.80 (0.76–0.86) for light smokers and 0.81 (0.76–0.87) for moderate smokers compared with nonsmokers. Moreover, the odds ratio (95% CIs) for abdominal obesity in females were 0.83 (0.71–0.98) for light smokers and 0.73 (0.58–0.91) for moderate smokers compared with nonsmokers.Conclusions Compared with nonsmokers, current smokers had lower BMI and WC among Chinese adults regardless of gender. Heavy smokers are more likely to be general obesity and abdominal obesity in male and abdominal obesity in female than other smokers. These findings may improve the understanding on how smoking behaviors affect fat distribution and provide scientific evidence regarding intervention in smoking and obesity by gender.
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- 2020
119. Disrupted rich-club network organization and individualized identification of patients with major depressive disorder
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Chunming Xie, Dandan Fan, Xinyi Liu, Cancan He, Qing Wang, Hongxing Zhang, Haisan Zhang, Feifei Zang, Yao Zhu, and Zhijun Zhang
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Adult ,Male ,Support Vector Machine ,Correlation ,03 medical and health sciences ,0302 clinical medicine ,medicine ,Connectome ,Humans ,Biological Psychiatry ,Depression (differential diagnoses) ,Default mode network ,Pharmacology ,Modularity (networks) ,Depressive Disorder, Major ,medicine.diagnostic_test ,business.industry ,Neuropsychology ,Brain ,medicine.disease ,Magnetic Resonance Imaging ,030227 psychiatry ,Diffusion Tensor Imaging ,Major depressive disorder ,Female ,Nerve Net ,Functional magnetic resonance imaging ,business ,Neuroscience ,Diffusion MRI - Abstract
Background Altered structural and functional brain networks have been extensively studied in major depressive disorder (MDD) patients. However, whether the differential connectivity patterns in the rich-club organization, assessed from structural brain network analyses, and the associated connections of these regions are particularly susceptible to depression remain unclear. Methods We acquired resting-state functional magnetic resonance imaging (R-fMRI) and diffusion tensor imaging (DTI) from 31 unmedicated MDD patients and 32 cognitively normal (CN) subjects and completed a series of neuropsychological tests. Rich-club organization, network properties, and coupling between structural and functional connectivity (SC-FC) were explored. Furthermore, whether these indices could potentially deliver effective clinical predictive value for MDD patients were examined. Results The MDD patients showed disrupted structural rich-club organization and modularity, as well as a distinct correlation pattern between global efficiency and rich-club organization. Importantly, reduced SC-FC coupling, reflecting a decreased agreement in the integrity of the networks, was significantly associated with the strength of structural rich-club connections in the MDD patients. Furthermore, the disrupted structural rich-club organization, which was primarily located in the default mode network (DMN) and executive control network (ECN), emerged as a valuable indicator to distinguish between MDD and CN. Conclusions Findings of this study identified that the disrupted rich-club structural organization significantly influenced brain structural network modularity and integrity and could serve as a promising biological marker for the identification of MDD patients.
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- 2020
120. Research on Adaptive Transmission Protocol of TT&C of Launch Vehicle Based on TDRSS
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Dandan Fan, Xingye Han, and Yi Dun
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History ,ComputerSystemsOrganization_COMPUTER-COMMUNICATIONNETWORKS ,ComputerApplications_COMPUTERSINOTHERSYSTEMS ,Data_CODINGANDINFORMATIONTHEORY ,Computer Science Applications ,Education - Abstract
The application of TDRSS in TT&C of launch vehicle can improve the coverage and transmission rate of TT&C link. But the transmission protocol based on fixed transmission rate can not ensure the stable TT&C link based on TDRSS. The adaptive transmission protocol proposed in this paper can adjust the transmission rate according to the real-time transmission status during the whole flight. According to the different types of rocket-borne subscriber terminals, the open loop adaptive transmission protocol and closed loop adaptive transmission protocol are designed, which can both keep the stable transmission and improve the transmission efficiency.
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- 2022
121. Molecular Signatures Related to the Virulence of Bacillus cereus Sensu Lato, a Leading Cause of Devastating Endophthalmitis
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Wei-Hua Chen, Yong-Liang Lou, Zhengbo Xue, Die Zhang, Kai Li, Dandan Fan, Clara Pak, Yu-Yu Li, Jiao Shao, Bianjin Sun, Yi Xu, Jian Yuan, Jianzhong Su, and Mei-Qin Zheng
- Subjects
pangenome ,Physiology ,Bacillus cereus ,lcsh:QR1-502 ,Virulence ,Context (language use) ,Bacillus ,Biochemistry ,Microbiology ,lcsh:Microbiology ,Clinical Science and Epidemiology ,03 medical and health sciences ,Endophthalmitis ,Bacillus thuringiensis ,evolution ,Genetics ,medicine ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,030304 developmental biology ,Bacillus (shape) ,0303 health sciences ,biology ,030306 microbiology ,fungi ,Eye infection ,biology.organism_classification ,medicine.disease ,QR1-502 ,Computer Science Applications ,virulence ,endophthalmitis ,Modeling and Simulation ,Intraocular Infection ,Research Article - Abstract
In this study, we provided a detailed and comprehensive clinicopathological and pathogenic report of Bacillus endophthalmitis over the 8 years of the study period. We first reported the whole-genome sequence of Bacillus spp. causing devastating endophthalmitis and found that Bacillus toyonensis is able to cause endophthalmitis. Finally, we revealed significant endophthalmitis-associated virulence genes involved in hemolysis, immunity inhibition, and pathogenesis. Overall, as more sequencing data sets become available, these data will facilitate comparative research and will reveal the emergence of pathogenic “ocular bacteria.”, Bacillus endophthalmitis is a devastating eye infection that causes rapid blindness through extracellular tissue-destructive exotoxins. Despite its importance, knowledge of the phylogenetic relationships and population structure of intraocular Bacillus spp. is lacking. In this study, we sequenced the whole genomes of eight Bacillus intraocular pathogens independently isolated from 8/52 patients with posttraumatic Bacillus endophthalmitis infections in the Eye Hospital of Wenzhou Medical University between January 2010 and December 2018. Phylogenetic analysis revealed that the pathogenic intraocular isolates belonged to Bacillus cereus, Bacillus thuringiensis and Bacillus toyonensis. To determine the virulence of the ocular isolates, three representative strains were injected into mouse models, and severe endophthalmitis leading to blindness was observed. Through incorporating publicly available genomes for Bacillus spp., we found that the intraocular pathogens could be isolated independently but displayed a similar genetic context. In addition, our data provide genome-wide support for intraocular and gastrointestinal sources of Bacillus spp. belonging to different lineages. Importantly, we identified five molecular signatures of virulence and motility genes associated with intraocular infection, namely, plcA-2, InhA-3, InhA-4, hblA-5, and fliD using pangenome-wide association studies. The characterization of overrepresented genes in the intraocular isolates holds value to predict bacterial evolution and for the design of future intervention strategies in patients with endophthalmitis. IMPORTANCE In this study, we provided a detailed and comprehensive clinicopathological and pathogenic report of Bacillus endophthalmitis over the 8 years of the study period. We first reported the whole-genome sequence of Bacillus spp. causing devastating endophthalmitis and found that Bacillus toyonensis is able to cause endophthalmitis. Finally, we revealed significant endophthalmitis-associated virulence genes involved in hemolysis, immunity inhibition, and pathogenesis. Overall, as more sequencing data sets become available, these data will facilitate comparative research and will reveal the emergence of pathogenic “ocular bacteria.”
- Published
- 2019
122. The prediction of oil price turning points with log-periodic power law and multi-population genetic algorithm
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Shanling Li, Dandan Fan, Tijun Fan, and Fangzheng Cheng
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Economics and Econometrics ,Spot contract ,Computer science ,020209 energy ,West Texas Intermediate ,05 social sciences ,Particle swarm optimization ,02 engineering and technology ,Power law ,General Energy ,0502 economics and business ,Simulated annealing ,Genetic algorithm ,0202 electrical engineering, electronic engineering, information engineering ,Econometrics ,False alarm ,050207 economics ,Oil price - Abstract
The turning points in international oil price are the most significant and sudden corrections in prices in the world market. Accurate prediction of turning points can help governments and enterprises develop effective oil reserve strategies and economic decisions. Nevertheless, forecasting the turning points poses great challenges in both methodology and computational effort. Log-periodic power law (LPPL) is one state-of-the-art method to predict turning points. In this research, we propose an improved version of LPPL forecasting model by incorporating a method called multi-population genetic algorithm (MPGA) to search for optimal values of parameters in the LPPL model. By doing so, the improved LPPL model provided significantly superior performance in predicting the turning points compared to prior researches. To verify the quality of the improved LPPL model, we collected the data of WTI spot price in the period starting from April 2003 to November 2016 and used the improved LPPL model to predict the three turning points in this period based on the data prior to the turning points. In addition, we compared the improved LPPL model with three LPPL models that use other approaches to search for parameters, including simulated annealing, standard genetic and particle swarm optimization. We showed that the results from our LPPL model are superior to other three search approaches. We also concluded that the fluctuation of the WTI (West Texas Intermediate) spot price in March 2017 is a false alarm of a major turning point. The improved LPPL has great potential to predict future turning points.
- Published
- 2018
123. Image-guided chemotherapy with specifically tuned blood brain barrier permeability in glioma margins
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Kun Fan, Xihui Gao, Daoying Geng, Qi Yue, Dandan Fan, Limei Han, Yikang Liu, Sihan Li, Xin Zhou, Fang Fang, Ying Mao, Liang Chen, Jun Qian, Cong Li, and Fulin Xu
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Male ,0301 basic medicine ,Medicine (miscellaneous) ,Vascular permeability ,Mice ,chemistry.chemical_compound ,Drug Delivery Systems ,0302 clinical medicine ,Medicine ,Pharmacology, Toxicology and Pharmaceutics (miscellaneous) ,medicine.diagnostic_test ,Brain Neoplasms ,Integrin beta3 ,Margins of Excision ,Glioma ,Middle Aged ,Magnetic Resonance Imaging ,Drug Therapy, Computer-Assisted ,medicine.anatomical_structure ,Paclitaxel ,Blood-Brain Barrier ,Female ,Research Paper ,medicine.drug ,Adult ,Single Photon Emission Computed Tomography Computed Tomography ,Adenosine A2 Receptor Agonists ,Antineoplastic Agents ,Blood–brain barrier ,blood-brain-barrier ,Tight Junctions ,Capillary Permeability ,03 medical and health sciences ,In vivo ,Animals ,Humans ,Aged ,nanoagonist ,Temozolomide ,business.industry ,Magnetic resonance imaging ,medicine.disease ,glioma margin ,030104 developmental biology ,chemistry ,Purines ,dynamic contrast-enhanced magnetic resonance imaging ,Zonula Occludens-1 Protein ,Cancer research ,Nanoparticles ,Pyrazoles ,image-guided chemotherapy ,business ,030217 neurology & neurosurgery ,Emission computed tomography - Abstract
Blood-brain barrier (BBB) disruption is frequently observed in the glioma region. However, the tumor uptake of drugs is still too low to meet the threshold of therapeutic purpose. Method: A tumor vasculature-targeted nanoagonist was developed. Glioma targeting specificity of the nanoagonist was evaluated by in vivo optical imaging. BBB permeability at the glioma margin was quantitatively measured by dynamic contrast enhanced magnetic resonance imaging (DCE-MRI). Single-photon emission computed tomography imaging/computed tomography (SPECT/CT) quantitatively determined the glioma uptake of the radiolabeled model drug. T2-weighted MRI monitored the tumor volume. Results: Immunostaining studies demonstrated that the BBB remained partially intact in the invasive margin of patients' gliomas regardless of their malignancies. DCE-MRI showed that vascular permeability in the glioma margin reached its maximum at 45 min post nanoagonist administration. In vivo optical imaging indicated the high glioma targeting specificity of the nanoagonist. SPECT/CT showed the significantly enhanced glioma uptake of the model drug after pre-treatment with the nanoagonist. Image-guided paclitaxel injection after nanoagonist-mediated BBB modulation more efficiently attenuated tumor growth and extended survival than in animal models treated with paclitaxel or temozolomide alone. Conclusion: Thus, image-guided drug delivery following BBB permeability modulation holds promise to enhance the efficacy of chemotherapeutics to glioma.
- Published
- 2018
124. Protein 4.1 family and ion channel proteins interact to regulate the process of heart failure in rats
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Zhikun Guo, Zhenyu Ji, Xiangguang Meng, Lei Hua, Qian Wang, Zhiying Li, Shuwei Ning, and Dandan Fan
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Heart Failure ,Male ,Histology ,Calcium Channels, L-Type ,Protein family ,Chemistry ,Myocardium ,Microfilament Proteins ,Cell Biology ,General Medicine ,medicine.disease ,NAV1.5 Voltage-Gated Sodium Channel ,Rats ,Sarcoplasmic Reticulum Calcium-Transporting ATPases ,Cell biology ,Rats, Sprague-Dawley ,Pathogenesis ,Heart failure ,medicine ,Animals ,Doxorubicin ,Cytoskeleton ,Function (biology) ,Ion channel ,medicine.drug - Abstract
Heart failure (HF) is a major cause of death in cardiovascular diseases worldwide, and its molecular mechanisms and effective prevention strategies remain to be further studied. The myocardial cytoskeleton plays a pivotal role in many heart diseases. However, little is known about the function of the membrane cytoskeleton 4.1 protein family and related regulatory mechanisms in the pathogenesis of HF. In this study, we detected the localization and expression of the protein 4.1 family and ion channel proteins in a rat HF model induced by doxorubicin (DOX), and studied the interactions between them. Our results showed that compared with the control group, the HF group displayed an increased expression level of protein 4.1R and decreased levels of protein 4.1 G and 4.1 N. The Nav1.5 protein levels were significantly increased, while the SERCA2a and Cav1.2 protein levels were significantly decreased in the HF group. Furthermore, there is co-localization and interaction between protein 4.1R and Nav1.5, protein 4.1 G and SERCA2a, protein 4.1 N and Cav1.2, respectively. Taken together, the results indicated that the protein 4.1 family might be involved in the occurrence and development of HF through its interaction with ion channel proteins, suggesting that 4.1 proteins may serve as a novel therapeutic target for HF.
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- 2021
125. Brain damage caused by chlorfenapyr poisoning: a case report and literature review.
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Fanglan Yao and Dandan Fan
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- *
POISONING , *BRAIN damage , *ENCEPHALOCELE , *POISONS , *CEREBRAL edema - Abstract
Chlorfenapyr poisoning is uncommon, but fatal, and is often ignored. Chlorfenapyr inhibits ATP production in the mitochondrial of lipid-rich organs such as the brain. The initial symptoms of chlorfenapyr poisoning are not serious and are usually ignored; fever and unconsciousness are the main signs. Patients often die of brain damage, and survivors often present toxic leukoencephalopathy. We report a case of a 15-year-old female who swallowed 10 mL of 10% chlorfenapyr, and was subjected to gastric lavage one hour after ingestion. The patient felt no discomfort on the first and second day after lavage and went to school. On the third day, the patient complained of a headache and rested at home. On the fourth day, the patient still complained of headache, and the condition progressed to confusion and fever; therefore, the patient was admitted to the emergency room and underwent hemoperfusion. Cerebral CT revealed diffuse brain edema. The patient died on the fourth day because of central fever, brain hernia, and brain dysfunction. Chlorfenapyr poisoning is fatal, even in small doses. Patients suspected of chlorfenapyr poisoning should be closely observed and promptly treated by hemoperfusion. [ABSTRACT FROM AUTHOR]
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- 2022
- Full Text
- View/download PDF
126. Analysis of Systematic Contribution Rate of TDRSS in the Remote Sensing Satellite System
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Jun Zheng, Dandan Fan, and Ming Chen
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History ,Evaluation system ,Remote sensing satellite ,Computer science ,Response ability ,Orbit (control theory) ,Computer Science Applications ,Education ,Weighting ,Remote sensing ,Data transmission - Abstract
The application of TDRSS in the low orbit remote sensing satellites system can improve the effectiveness of remote sensing satellites. This paper built an evaluation system of remote sensing satellites from observation ability, response ability, data transmission ability and control ability. And linear weighting method was used for quantitative analysis of systematic contribution rate of TDRSS. As shown by the analysis result, TDRSS can improve the response ability, data transmission ability and control ability.
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- 2021
127. Protein 4.1R is Involved in the Transport of 5-Aminolevulinic Acid by Interaction with GATs in MEF Cells
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Chaoyue Xue, Zhenyu Ji, Dandan Fan, Jingjing Liu, Xiaolin Zhang, Cong Ding, Qian Peng, Shuwei Ning, Qiaozhen Kang, and Zhang Jianying
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0301 basic medicine ,GABA Plasma Membrane Transport Proteins ,medicine.medical_treatment ,Protoporphyrins ,Photodynamic therapy ,Biochemistry ,Cell Line ,Mice ,03 medical and health sciences ,0302 clinical medicine ,medicine ,Animals ,Physical and Theoretical Chemistry ,Tiagabine ,Gene knockout ,Mice, Knockout ,chemistry.chemical_classification ,Analysis of Variance ,Reactive oxygen species ,Photosensitizing Agents ,Chemistry ,Microfilament Proteins ,Transporter ,Aminolevulinic Acid ,General Medicine ,Fibroblasts ,Cell biology ,030104 developmental biology ,Membrane ,Cell culture ,030220 oncology & carcinogenesis ,Cancer cell ,GABA Uptake Inhibitors ,Reactive Oxygen Species ,Intracellular - Abstract
5-aminolevulinic acid (5-ALA)-based photodynamic therapy (PDT) has been successfully used in the treatment of cancers. However, the mechanism of 5-ALA transportation into cancer cells is still not fully elucidated. Previous studies have confirmed that the efficiency of 5-ALA-PDT could be affected by the membrane skeleton protein 4.1R. In this study, we investigated the role of 4.1R in the transport of 5-ALA into cells. Wild-type (4.1R+/+ ) and 4.1R gene knockout (4.1R-/- ) mouse embryonic fibroblast (MEF) cells were incubated with 1 mm 5-ALA and different concentrations of specific inhibitors of GABA transporters GAT (1-3). Our results showed that the inhibition of GAT1 and GAT2 in particular markedly attenuated the intracellular PpIX production, reactive oxygen species (ROS) level and 5-ALA-induced photodamage. However, the inhibition of GAT3 did not show such effects. Further research showed that 4.1R-/- MEF cells had a lower expression of GAT1 and GAT2 than 4.1R+/+ MEF cells. Additionally, 4.1R directly bound to GAT1 and GAT2. Taken together, GAT1 and GAT2 transporters are involved in the uptake of 5-ALA in MEF cells. 4.1R plays an important role in transporting 5-ALA into cells via at least partly interaction with GAT1 and GAT2 transporters in 5-ALA-PDT.
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- 2017
128. Effect of Melt Superheating Treatment on the Latent Heat Release of Sn
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Dandan Fan, Bo Dang, Junfeng Xu, and Zengyun Jian
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Imagination ,Materials science ,Chemical substance ,media_common.quotation_subject ,Enthalpy ,chemistry.chemical_element ,Thermodynamics ,02 engineering and technology ,01 natural sciences ,law.invention ,Magazine ,law ,Latent heat ,0103 physical sciences ,Crystallization ,010306 general physics ,media_common ,Metallurgy ,Metals and Alloys ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,Superheating ,chemistry ,Mechanics of Materials ,0210 nano-technology ,Tin - Abstract
The accuracy of the baseline evaluation is of importance for calculating the transition enthalpy such as the latent heat of the crystallization. This study demonstrates the modified method of the equivalent non-latent heat baseline, by which the transition enthalpy can be measured accurately according to the transition peak in differential scanning calorimetric curve. With this method, the effect of melt superheating treatment time on the latent heat release upon the solidification of tin is investigated. The results show that the latent heat increases by increasing the treatment time, and is close to a constant when the treatment time is large enough, indicating the homogeneous system. And then, a simple model is established to describe the changes of the crystallization latent heat with the treatment time, which is confirmed by the experimental data of Sn.
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- 2016
129. Flame Retardancy and Mechanism of Cotton Fabric Finished by Phosphorus Containing SiO2 Hybrid Sol
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Songtao Zhou, Fei You, Dandan Fan, Dan Li, and Huangfu Wenhao
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chemistry.chemical_compound ,Thermogravimetric analysis ,Materials science ,chemistry ,Chemical engineering ,Thermal stability ,Fourier transform infrared spectroscopy ,Pyrolysis ,Fire retardant ,Tetraethyl orthosilicate ,Sol-gel ,Limiting oxygen index - Abstract
Sol-gel method was used by taking tetraethyl orthosilicate (TEOS) as precursor, ethanol (C 2 H 5 OH) as solvent and hydrochloric acid (HCl) as catalyst, 1-γ-methacryloxypropyl trimethoxysilane (KH570) as a coupling agent for preparations of SiO 2 , KH570 and 9,10-Dihydro-9-oxa-10-phosphaphenanthrene-10-oxide (DOPO, flame retardant) sols to improve flame retardancy and thermal stability of cotton fabrics. Dipping-baking process was used for finishing cotton fabrics. Surface morphology, surface functional group and element distribution, intrinsic crystal structure, pyrolysis characteristics and flame retardancy of cotton fabrics were characterized by Scanning electron microscopy (SEM), Fourier transform infrared spectroscopy (FTIR), X-ray photoelectron spectroscopy (XPS), X-ray diffraction (XRD), thermogravimetric analysis (TG), and limiting oxygen index (LOI). Results show that DOPO and SiO 2 sol have good synergistic flame retardant effect. Cotton fabric finished by hybrid sol of SiO 2 -KH570-DOPO has the best flame retardant effect, its LOI is 22.8 %, ΔLOI/Δm is 4.20 %/g. DOPO-contained hybrid sol can promote formation of three-dimensional microscopic gel coating and residual char in condensed phase.
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- 2019
130. Computational identification of mutator-derived lncRNA signatures of genome instability for improving the clinical outcome of cancers: a case study in breast cancer
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Dandan Fan, Jianzhong Su, Hengqiang Zhao, Zicheng Zhang, Jian Yuan, Siqi Bao, and Meng Zhou
- Subjects
0301 basic medicine ,Genome instability ,Breast Neoplasms ,Computational biology ,Biology ,Genome ,Genomic Instability ,03 medical and health sciences ,0302 clinical medicine ,Breast cancer ,Germline mutation ,Neoplasms ,medicine ,Humans ,Clinical significance ,Molecular Biology ,Computational Biology ,Gene signature ,medicine.disease ,030104 developmental biology ,Treatment Outcome ,030220 oncology & carcinogenesis ,Mutation ,Cancer biomarkers ,Female ,RNA, Long Noncoding ,Ovarian cancer ,Information Systems - Abstract
Emerging evidence revealed the critical roles of long non-coding RNAs (lncRNAs) in maintaining genomic instability. However, identification of genome instability-associated lncRNAs and their clinical significance in cancers remain largely unexplored. Here, we developed a mutator hypothesis-derived computational frame combining lncRNA expression profiles and somatic mutation profiles in a tumor genome and identified 128 novel genomic instability-associated lncRNAs in breast cancer as a case study. We then identified a genome instability-derived two lncRNA-based gene signature (GILncSig) that stratified patients into high- and low-risk groups with significantly different outcome and was further validated in multiple independent patient cohorts. Furthermore, the GILncSig correlated with genomic mutation rate in both ovarian cancer and breast cancer, indicating its potential as a measurement of the degree of genome instability. The GILncSig was able to divide TP53 wide-type patients into two risk groups, with the low-risk group showing significantly improved outcome and the high-risk group showing no significant difference compared with those with TP53 mutation. In summary, this study provided a critical approach and resource for further studies examining the role of lncRNAs in genome instability and introduced a potential new avenue for identifying genomic instability-associated cancer biomarkers.
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- 2019
131. Protein 4.1R negatively regulates <scp>CD</scp> 8 + T cell activation by modulating phosphorylation of <scp>LAT</scp>
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Yaxin Guo, Zhenyu Ji, Jianhui Li, Xiaojie Liu, Xiaolin Zhang, Dai Liping, Qiaozhen Kang, Dandan Fan, Liguo Zhang, Jingjing Liu, Yi Li, and Wen Wang
- Subjects
Intracellular signal transduction ,Immune system ,Chemistry ,Immunology ,Immunology and Allergy ,Cytotoxic T cell ,Linker for Activation of T cells ,Phosphorylation ,Secretion ,Cell activation ,CD8 ,Cell biology - Abstract
Protein 4.1R, an 80 000 MW membrane skeleton protein, is a vital component of the red blood cell membrane cytoskeleton that stabilizes the spectrin-actin network and regulates membrane properties of deformability and mechanical stability. It has been shown that 4.1R is expressed in T cells, including CD8+ T cells, but its role in CD8+ T cells remains unclear. Here, we have explored the role of 4.1R in CD8+ T cells using 4.1R-/- mice. Our results showed that cell activation, proliferation and secretion levels of interleukin-2 and interferon-γ were significantly increased in 4.1R-/- CD8+ T cells. Furthermore, the phosphorylation levels of linker for activation of T cells (LAT) and its downstream signaling molecule extracellular signal-regulated kinase were enhanced in the absence of 4.1R. In vitro co-immunoprecipitation experiments showed a direct interaction between 4.1R and LAT. Moreover, 4.1R-/- CD8+ T cells and mice exhibited an enhanced T-cell-dependent immune response. These data enabled the identification of a negative regulation function for 4.1R in CD8+ T cells by a direct association between 4.1R and LAT, possibly through inhibiting phosphorylation of LAT and then modulating intracellular signal transduction.
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- 2019
132. Protein 4.1R negatively regulates CD8
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Dandan, Fan, Jianhui, Li, Yi, Li, Yaxin, Guo, Xiaolin, Zhang, Wen, Wang, Xiaojie, Liu, Jingjing, Liu, Liping, Dai, Liguo, Zhang, Qiaozhen, Kang, and Zhenyu, Ji
- Subjects
Mice, Knockout ,Microfilament Proteins ,Membrane Proteins ,Original Articles ,CD8-Positive T-Lymphocytes ,Lymphocyte Activation ,Phosphoproteins ,Mice ,Cell Line, Tumor ,Animals ,Humans ,Phosphorylation ,Adaptor Proteins, Signal Transducing ,Signal Transduction - Abstract
Protein 4.1R, an 80 000 MW membrane skeleton protein, is a vital component of the red blood cell membrane cytoskeleton that stabilizes the spectrin–actin network and regulates membrane properties of deformability and mechanical stability. It has been shown that 4.1R is expressed in T cells, including CD8(+) T cells, but its role in CD8(+) T cells remains unclear. Here, we have explored the role of 4.1R in CD8(+) T cells using 4.1R(−/−) mice. Our results showed that cell activation, proliferation and secretion levels of interleukin‐2 and interferon‐γ were significantly increased in 4.1R(−/−) CD8(+) T cells. Furthermore, the phosphorylation levels of linker for activation of T cells (LAT) and its downstream signaling molecule extracellular signal‐regulated kinase were enhanced in the absence of 4.1R. In vitro co‐immunoprecipitation experiments showed a direct interaction between 4.1R and LAT. Moreover, 4.1R(−/−) CD8(+) T cells and mice exhibited an enhanced T‐cell‐dependent immune response. These data enabled the identification of a negative regulation function for 4.1R in CD8(+) T cells by a direct association between 4.1R and LAT, possibly through inhibiting phosphorylation of LAT and then modulating intracellular signal transduction.
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- 2019
133. Effects of exosomes on pre-metastatic niche formation in tumors
- Author
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Haijiang Wang, Weitang Yuan, Chen Chen, Xiang Ji, Weiwei Wang, Guixian Wang, Quanbo Zhou, Yaxin Guo, Jinbo Liu, Zhenqiang Sun, Zhenyu Ji, and Dandan Fan
- Subjects
0301 basic medicine ,Cancer Research ,Angiogenesis ,Niche ,Inflammation ,Cell Communication ,Review ,Biology ,Exosomes ,lcsh:RC254-282 ,03 medical and health sciences ,0302 clinical medicine ,Circulating tumor cell ,Immune system ,Neoplasms ,medicine ,Animals ,Humans ,Neoplasm Metastasis ,Tumor microenvironment ,Pre-metastatic niche ,Immunoregulation ,Biomarker ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Microvesicles ,030104 developmental biology ,Oncology ,030220 oncology & carcinogenesis ,Cancer research ,Disease Progression ,Molecular Medicine ,medicine.symptom - Abstract
A pre-metastatic niche is a microenvironment prepared for the colonization of circulating tumor cells in specific organs. Exosomes are extracellular vesicles with a variety of biological functions. Exosomes play an irreplaceable role in the development of pre-metastatic niches, and mainly function as communication medium. In this review, we analyzed the effects of exosomes on pre-metastatic niches from various perspectives, including inflammation, immune response, angiogenesis, organotropism, matrix remodeling and biomarker expression. In particular, exosomes express programmed death ligand 1 (PD-L1) and cause the immune escape of tumor cells. The immunomodulatory effects of exosomes and their potential in liquid diagnosis have drawn our attention. The potential value of exosomes and pre-metastatic niches will be realized in the field of immunity therapy.
- Published
- 2019
134. [Association of obesity indexes with hypertension and dyslipidemia in Chinese adults]
- Author
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DANDan, Fan, Chang, Su, Wenwen, Du, Huijun, Wang, Zhihong, Wang, Yang, Chen, and Bing, Zhang
- Subjects
Adult ,Male ,Adolescent ,Waist-Hip Ratio ,Middle Aged ,Body Mass Index ,Young Adult ,Cross-Sectional Studies ,ROC Curve ,Risk Factors ,Hypertension ,Humans ,Female ,Obesity ,Waist Circumference ,Aged ,Dyslipidemias - Abstract
To explore the association of obesity indicators with hypertension and dyslipidemia in adults.The study used anthropometric data of 1022 adults aged 18-69 years in Liaoning, Henan and Hunan Provinces in 2012 to describe the overweight and obesity rate of body mass index( BMI), waist circumference( WC), waist to height ratio( WHtR), waist hip ratio( WHR) and body fat percentage( BF%). The ability of indicators to predict the risk of hypertension and dyslipidemia was evaluated by receiver operating characteristic( ROC) curve analysis.In comparison of anthropometric measurements, male WC was significantly higher than female, thigh circumference( ThC) was no gender differences and thigh height ratio( THtR) lower in men than in women. The obesity index was used to determine the overweight and obesity rate of Chinese adults: WHtRWHRBMIBF%WC was58. 7%, 50. 4%, 49. 1%, 35. 7% and 35. 3%, respectively. The obesity rate of BMI was13. 2%, significantly lower than other indicators. The ROC curve illustrated area under curve( AUC) of WHtR was the largest in predicting the risk of hypertension, and the cutoff values were 0. 53 and 0. 56 in male and female. AUC of WHR were the largest with hypercholesterolemia as dependent variables in male and female and as the only significant indicator in men. The value of BMI, WC, WHtR, WHR and BF% to predict the risk of hypertriglyceridemia was similar. ThC and THtR had a better prognosis value than BMI, WC, WHtR and other common indicators in low high-density lipoprotein cholesterolemia, especially in male residents. The cut-off values of ThC were 52. 50 and 55. 40, and the cut-off values of THtR were 0. 31 and 0. 35 in male and female.Men are more likely to hoard fat in the abdomen, female fat easily in the thigh accumulation. WHtR is the best index in predicting the risk of hypertension. The association between obesity indexes and different clinical classification of dyslipidemia are not the same: WHR shows the best effect in predicting the risk of hypercholesterolemia, BMI, WC, WHtR, WHR and BF% have the same value in predicting the risk of hypertriglyceridemia, ThC and THtR are better than BMI, WC, WHtR and other common indicators in predicting the risk of low high-density lipoprotein cholesterolemia, especially in male residents.
- Published
- 2018
135. RECQL5 mutations as a potential efficacious predictor of immunotherapy in melanoma patients
- Author
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Ting Bei, Yun Zhao, Yaoxu Chen, Xiaochun Huang, Dandan Fan, and Mengli Huang
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Cancer Research ,Oncology ,business.industry ,medicine.medical_treatment ,Melanoma ,Immune checkpoint inhibitors ,Cancer research ,medicine ,Immunotherapy ,Gene mutation ,business ,medicine.disease ,DNA Damage Repair - Abstract
e21547 Background: Gene mutations in DNA damage repair (DDR) pathway were reported to affect the clinical response to immune checkpoint inhibitors (ICIs) by driving mutagenicity. Previous studies showed that RECQL5 is involved in RAD51-mediated strand invasion for homologous recombination DNA damage repair (HR-DDR). RECQL5 encoding RecQ protein-like 5 (RECQL5) is a member of RecQ helicase family and was discovered to play a tumor-suppressive or oncogenic role in various cancers. However, the association between RECQL5 mutation and ICI efficacy has not been revealed. Methods: Data of nine publicly independent cohorts of NSCLC, melanoma, and pan-cancer were retrieved (Rizvi, MSKCC, OAK/POPLAR, Van Allen, Hugo, Synder, Miao and Samstein cohorts) to investigate the correlation between RECQL5 mutations and clinical events including overall survival (OS), progression-free survival (PFS), objective response rate (ORR), and clinical benefit rate (CBR). Wilcoxon test was used for comparing tumor mutational burden (TMB) between RECQL5-mutated patients and their wild-type counterparts. In addition, the correlation between infiltration of immune cells and RECQL5 mutation status was also analyzed by QUANTISEO using data of SKCM cohort (n=466) from TCGA database. Statistical significance was set at P = 0.05. Results: RECQL5 mutations were most commonly seen in melanoma patients and the detection rate was 4%-8% in melanoma patients from cohort Van Allen, Hugo, Synder, and Miao. RECQL5 mutation was not detected in other cancers except for one lung cancer case. In the three melanoma cohorts (Van Allen, Synder, Miao) with OS data available, the OS of the RECQL5-mutated patients was 2 to 3 times longer than that of the RECQL5-wt patients. In Synder cohort, the difference in OS between these two subsets was statistically significant (53.9 months vs 25.0 months, P = 0.045). In addition, the occurrence of RECQL5 mutations was correlated with higher CBR both in Miao ( P = 0.017) and Synder cohorts ( P = 0.011). No difference was observed in the PFS or ORR between these two subsets. Notably, RECQL5 mutations were associated with higher TMB levels both in Miao (32.6 mut/Mb vs 7.9 mut/Mb, P = 0.016) and Synder cohorts (1124 mut/Mb vs 358 mut/Mb, P = 0.033). Moreover, RECQL5 mutations were found to be correlated with increased infiltration of CD4+ T cells (no-regulatory) ( P = 0.037), B cells ( P = 0.13) and decreased infiltration of regulatory CD4+ T cells ( P = 0.02) in RECQL5-mutated tumors over RECQL5-wt tumors. Conclusions: RECQL5 mutations can serve as a potential predictor for a durable response to ICIs in melanoma. Moreover, the occurrence of RECQL5 mutations was correlated with higher TMB level as well as infiltration of immune cells, indicating the underlying mechanism of its predictive effect.
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- 2021
136. Association of PTPN11 mutation with tumor mutation burden and survival in melanoma patients treated with immune checkpoint inhibitors
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Dandan Fan and De Long
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PTPN11 ,Cancer Research ,Oncology ,business.industry ,Melanoma ,Immune checkpoint inhibitors ,Mutation (genetic algorithm) ,Cancer research ,medicine ,Skin cancer ,medicine.disease ,business - Abstract
e21596 Background: Melanoma is a serious skin cancer. Immune checkpoint inhibitors (ICIs) have shown durable responses and have been approved by FDA. However, ICIs demonstrate antitumor effects only in a fraction of patients, and research exploring the association between gene mutation and clinical benefit is limited. Mutations of PTPN11 (Protein Tyrosine Phosphatase, Non-receptor type11) have been reported to be associated with higher response rate and prolonged survival in advanced Renal Cell Carcinoma, Glioblastoma. The association between PTPN11 mutation and the efficacy of ICIs for melanoma is unknown. Methods: Genomic and survival data of melanoma patients administrated with ICIs were retrieved from publicly accessible data (Melanoma.Allen2015.WES.110) and the association between PTPN11 mutation and progression-free survival (PFS) and overall survival (OS) were analyzed using Kaplan-Meier curves and log-rank tests. At the same time,the association between PTPN11 mutation with TMB was also analyzed in this public immunotherapy-treated cohort(Melanoma.Allen2015.WES.110), Wilcoxon test was used for the comparison of TMB. In addition, Genomic, immune cell infiltration data of 466 patients with Skin Cutaneous Melanoma (SKCM) was obtained from The Cancer Genome Atlas (TCGA). The correlation analysis between immune cell infiltration and PTPN11 mutation status was further analyzed by CIBERSORT. Statistical significance was set at p = 0.05. Results: 3.6% (4/110) patients in the clinical cohort harbored PTPN11 mutation. Survival analysis in the public cohort demonstrated that PTPN11 mutation resulted in significantly longer OS (33.6 vs 8.5 months; HR, 0.16; p = 0.037) and an increasing trend on PFS without significantly difference (9.1 vs 2.8 months; HR, 0.3; P = 0.078) in melanoma patients treated with ICIs. Moreover, PTPN11 mutation is associated with higher TMB in public cohort (p = 0.01). Furthermore, the correlation analysis between immune infiltration and PTPN11 mutation status in melanoma shows that M1 macrophages increased significantly (p = 0.0014), CD8 T cells, plasma B cells and activated NK cells also show an upward trend (p = 0.17, p = 0.17 and p = 0.19) while the resting NK cells decreased significantly (p = 0.016)in melanoma patients with PTPN11 mutation. Conclusions: This study shows that PTPN11 mutation may serve as a potential positive biomarker of ICIs in melanoma since it relatively correlated with higher TMB. In addition, the up regulation of M1 macrophages and the down regulation of resting NK cells may be a potential mechanism for the better efficacy of ICIs in patients with PTPN11 mutation.
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- 2021
137. A hybrid neural network approach for classifying diabetic retinopathy subtypes
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Huanqing Xu, Xian Shao, Dandan Fang, and Fangliang Huang
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diabetic retinopathy classifications ,hybrid neural network ,EfficientNet ,Swin Transformer ,CAD systems ,Medicine (General) ,R5-920 - Abstract
ObjectiveDiabetic retinopathy is a prevalent complication among diabetic patients that, if not predicted and treated promptly, can lead to blindness. This paper proposes a method for accurately and swiftly predicting the degree of diabetic retinopathy using a hybrid neural network model. Timely prediction of diabetic retinopathy is crucial in preventing blindness associated with this condition.MethodsThis study aims to enhance the prediction accuracy of diabetic retinopathy by utilizing the hybrid neural network model EfficientNet and Swin Transformer. The specific methodology includes: (1) combining local and global features to accurately capture lesion characteristics by leveraging the strengths of both Swin Transformer and EfficientNet models; (2) improving prediction accuracy through a comprehensive analysis of the model’s training details and applying data augmentation techniques such as Gaussian blur to enhance the hybrid model’s performance; (3) validating the effectiveness and utility of the proposed hybrid model for diabetic retinopathy detection through extensive experimental evaluations and comparisons with other deep learning models.ResultsThe hybrid model was trained and tested on the large-scale real-world diabetic retinopathy detection dataset APTOS 2019 Blindness Detection. The experimental results show that the hybrid model in this paper achieves the best results in all metrics, including sensitivity of 0.95, specificity of 0.98, accuracy of 0.97, and AUC of 0.97. The performance of the model is significantly improved compared to the mainstream methods currently employed. In addition, the model provides interpretable neural network details through class activation maps, which enables the visualization of diabetic retinopathy. This feature helps physicians to make more accurate diagnosis and treatment decisions. The model proposed in this paper shows higher accuracy in detecting and diagnosing diabetic retinopathy, which is crucial for the treatment and rehabilitation of diabetic patients.ConclusionThe hybrid neural network model based on EfficientNet and Swin Transformer significantly contributes to the prediction of diabetic retinopathy. By combining local and global features, the model achieves improved prediction accuracy. The validity and utility of the model are verified through experimental evaluations. This research provides robust support for the early diagnosis and treatment of diabetic patients.
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- 2024
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138. Identification of proteins associated with pediatric bilateral Wilms tumor
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Ruiyi Zhou, Zehua Wang, Junjie Zhang, Jiekai Yu, Fei Guo, Dandan Fan, Wei Zhao, Shu Zheng, Jiaxiang Wang, Jinjian Yang, Yuxiao Zhan, Dongjian Song, Shuqiang Zuo, Zechen Yan, and Qingjun Meng
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0301 basic medicine ,Cancer Research ,Pathology ,medicine.medical_specialty ,Apolipoprotein B ,apolipoprotein C-III ,Proteomics ,Gastroenterology ,03 medical and health sciences ,proteomics ,0302 clinical medicine ,Western blot ,Internal medicine ,medicine ,Bilateral Wilms Tumor ,biology ,Oncogene ,medicine.diagnostic_test ,Cancer ,Wilms' tumor ,Articles ,medicine.disease ,Molecular medicine ,030104 developmental biology ,Oncology ,030220 oncology & carcinogenesis ,nephroblastoma ,biology.protein ,biological markers - Abstract
Wilms tumor (WT) is the most common cancer that primarily develops in abdominal solid organ of children. It has no incipient symptom, and the most frequent symptoms are a painless, palpable abdominal mass. Proteomics technology was used to select the differentially expressed proteins of bilateral Wilms tumor (BWT). Ten serum samples of children with BWT were chosen, 20 serum samples of children with unilateral WT (UWT) and 20 serum samples of healthy children were selected, and proteomics technology was used to detect and collect data. Using bioinformatics, the data were analyzed and 10 difference peaks were obtained (P
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- 2016
139. Correction to 'On the distance Laplacian spectral radius of bipartite graphs' [Discrete Appl. Math. 186 (2015) 207–213]
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Aihong Niu, Guoping Wang, and Dandan Fan
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Discrete mathematics ,Spectral radius ,Applied Mathematics ,0211 other engineering and technologies ,021107 urban & regional planning ,0102 computer and information sciences ,02 engineering and technology ,01 natural sciences ,Combinatorics ,010201 computation theory & mathematics ,Bipartite graph ,Discrete Mathematics and Combinatorics ,Laplace operator ,Mathematics - Published
- 2016
140. An electric-field-responsive paramagnetic contrast agent enhances the visualization of epileptic foci in mouse models of drug-resistant epilepsy
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Xingyu Zhou, Cong Wang, Hong Zhang, Haoran Liu, Dandan Fan, Zhaobing Gao, Ming Qi, Jun Zhang, Cong Li, Jianhong Wang, Sun Wanbing, Haiyan Xu, Mei Tian, Ying Mao, Zixuan Wei, Jianping Zhang, Nicholas J. Long, Qinghua Guo, and Xihui Gao
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0301 basic medicine ,Adult ,Male ,media_common.quotation_subject ,MRI contrast agent ,Biomedical Engineering ,Drug Resistance ,Medicine (miscellaneous) ,Contrast Media ,Bioengineering ,Ferric Compounds ,Lesion ,03 medical and health sciences ,Epilepsy ,Mice ,Young Adult ,0302 clinical medicine ,Text mining ,Nuclear magnetic resonance ,medicine ,Contrast (vision) ,Animals ,Humans ,Epilepsy surgery ,Cells, Cultured ,media_common ,medicine.diagnostic_test ,business.industry ,Chemistry ,Brain ,Magnetic resonance imaging ,Middle Aged ,Drug Resistant Epilepsy ,medicine.disease ,Magnetic Resonance Imaging ,Computer Science Applications ,Mice, Inbred C57BL ,Disease Models, Animal ,030104 developmental biology ,Blood-Brain Barrier ,Female ,medicine.symptom ,business ,030217 neurology & neurosurgery ,Biotechnology - Abstract
For patients with drug-resistant focal epilepsy, excision of the epileptogenic zone is the most effective treatment approach. However, the surgery is less effective in the 15-30% of patients whose lesions are not distinct when visualized by magnetic resonance imaging (MRI). Here, we show that an intravenously administered MRI contrast agent consisting of a paramagnetic polymer coating encapsulating a superparamagnetic cluster of ultrasmall superparamagnetic iron oxide crosses the blood-brain barrier and improves lesion visualization with high sensitivity and target-to-background ratio. In kainic-acid-induced mouse models of drug-resistant focal epilepsy, electric-field changes in the brain associated with seizures trigger breakdown of the contrast agent, restoring the T1-weighted magnetic resonance signal, which otherwise remains quenched due to the distance-dependent magnetic resonance tuning effect between the cluster and the coating. The electric-field-responsive contrast agent may increase the probability of detecting seizure foci in patients and facilitate the study of brain diseases associated with epilepsy.
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- 2018
141. Peptide-Functionalized Nanoinhibitor Restrains Brain Tumor Growth by Abrogating Mesenchymal-Epithelial Transition Factor (MET) Signaling
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Qi Fan, Xiaofeng Tao, Karen Briley-Saebo, Zhonglian Cao, Dandan Fan, Feng Zeng, Cong Li, Xinwei Li, Qinghua Guo, Jian Chen, Wenjia Duan, Yingwei Wu, and Jinyu Zhu
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0301 basic medicine ,Dendrimers ,Brain tumor ,Bioengineering ,Peptide ,Nanoconjugates ,03 medical and health sciences ,Mice ,0302 clinical medicine ,Glioma ,Cell Line, Tumor ,medicine ,Mesenchymal–epithelial transition ,Animals ,Humans ,General Materials Science ,Cell Proliferation ,chemistry.chemical_classification ,Transition (genetics) ,Chemistry ,Brain Neoplasms ,Mechanical Engineering ,General Chemistry ,Proto-Oncogene Proteins c-met ,Condensed Matter Physics ,medicine.disease ,In vitro ,Orders of magnitude (mass) ,Nylons ,030104 developmental biology ,030220 oncology & carcinogenesis ,Cancer research ,Phosphorylation ,Glioblastoma ,Peptides ,Signal Transduction - Abstract
Malignant gliomas are the most common primary brain tumors and are associated with aggressive growth, high morbidity, and mortality. Aberrant mesenchymal-epithelial transition factor (MET) activation occurs in approximately 30% of glioma patients and correlates with poor prognosis, elevated invasion, and increased drug resistance. Therefore, MET has emerged as an attractive target for glioma therapy. In this study, we developed a novel nanoinhibitor by conjugating MET-targeting cMBP peptides on the G4 dendrimer. Compared to the binding affinity of the free peptide (KD = 3.96 × 10–7 M), the binding affinity of the nanoinhibitor to MET increased 3 orders of magnitude to 1.32 × 10–10 M. This nanoinhibitor efficiently reduced the proliferation and invasion of human glioblastoma U87MG cells in vitro by blocking MET signaling with remarkably attenuated levels of phosphorylated MET (pMET) and its downstream signaling proteins, such as pAKT and pERK1/2. Although no obvious therapeutic effect was observed after tr...
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- 2018
142. [The optimal cut-off values of body fat percentage in adults among Chinese three provinces]
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Dandan, Fan, Chang, Su, Wenwen, Du, Huijun, Wang, Zhihong, Wang, and Bing, Zhang
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Adult ,Male ,China ,Waist-Height Ratio ,Adolescent ,Waist-Hip Ratio ,Middle Aged ,Body Mass Index ,Young Adult ,Cross-Sectional Studies ,Adipose Tissue ,Asian People ,ROC Curve ,Reference Values ,Body Composition ,Prevalence ,Humans ,Female ,Obesity ,Waist Circumference ,Aged - Abstract
To determine the optimal cut-off values of body fat percentage(BF%)in Chinese adults.A total of 1022 adults aged 18-69 years in Liaoning, Henan and Hunan Province was enrolled in this study. Analyzed the changes of BF%in different percentiles of body mass index(BMI), waist circumference(WC), waist-to-height ratio(WHtR), waist-to-hip ratio(WHR). BF%cut-off values were determined by receiver operating characteristic(ROC)curve.In Chinese adults, the average of BF%was 22. 1%in males and 33. 2%in females. The obesity prevalence determined by BF%cut-off points(recommended by WHO)was 31. 4%in men and 39. 3%in women. Taking hypertension as a dependent variable, ROC curve analysis showed that the optimal BF%cut-off value was 23. 2%(sensitivity:0. 61, specificity:0. 61)in men and 36. 4%(sensitivity:0. 48, specificity:0. 76)in women.In China, the optimal cut-off value of BF%in adult men is lower than the international standard, whereas the optimal cut-off value of BF%in adult women is higher than the international standard. It is of higher significance to make optimal BF%cut-off values for our own country.
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- 2018
143. [Intake of fruits among Chinese adults aged 18-65 years old in 15 provinces, 2015]
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Yang, Chen, Jiguo, Zhang, Xiaofang, Jia, Wenwen, Du, Chang, Su, Bing, Zhang, Zhihong, Wang, Dandan, Fan, and Huijun, Wang
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Adult ,Male ,China ,Adolescent ,Feeding Behavior ,Middle Aged ,Nutrition Surveys ,Diet ,Cohort Studies ,Young Adult ,Asian People ,Fruit ,Vegetables ,Humans ,Female ,Aged - Abstract
To evaluate the usual fruit intake of Chinese adults.A total of 12 379 adults aged 18 to 65 years old with both 3 days 24 hours dietary recall data and FFQ data were chosen from China Nutritional Transition Cohort Study( 2015). The models of fruit consumption probability and amount for Chinese adults were fitted using the National Cancer Institute method( referred to as NCI), to evaluate the fruit usual intake of Chinese adults, and to describe the distribution of the consumption.According to 3 consecutive days of 24 hours dietary recall, the probability of consumption of fruit among Chinese adults was 40. 2%, the median of cosumption was 0( 0, 70. 0) g/d. The frequency of fruit consumption greater than or equal to once a day was17. 4% in male, which was lower than that of 22. 9% in female. According to the NCI method, the probability of fruit consumption among Chinese adults reached 98. 7%, the fruit consumption probability in male was 98. 3%, slightly lower than that of 99. 1% in female; the median of average daily consumption of fruit was 6. 4( 3. 2, 58. 3) g/d, it was4. 4( 2. 5, 36. 7) g/d in male, 9. 0( 4. 1, 78. 6) g/d in female.Through the NCI method, the rate of consumption of fruit among Chinese adults has been greatly improved. And the distribution of fruit consumption has been somewhat improved, but was still on the low level, far away from the lowest recommended intake. Some measures should be taken to guide reasonable fruit consumption behavior among Chinese residents. Meanwhile, by combining the FFQ method with dietary recall method, separating the nonconsumers from the un-consumers, and taking into account the correlation between fruit consumption probability and amount, NCI method can reevaluate the usual intake of fruits.
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- 2018
144. Characterization of avian influenza H9N2 viruses isolated from ostriches (Struthio camelus)
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Yi Zhang, Shouchun Wang, Jingjing Wang, Wenya Chen, Dandan Fan, Jiming Chen, Ning Luo, Dongdong Wang, Zongtong Yang, Yanbo Yin, Yuhai Bi, Shouzhen Xu, Jianlin Wang, and Liu Hong
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0301 basic medicine ,China ,viruses ,Fowl ,Guinea Pigs ,Population ,lcsh:Medicine ,medicine.disease_cause ,Article ,Virus ,Mice ,03 medical and health sciences ,Reassortant Viruses ,Disease Transmission, Infectious ,Influenza A Virus, H9N2 Subtype ,Influenza A virus ,medicine ,Animals ,lcsh:Science ,education ,Phylogeny ,Struthioniformes ,education.field_of_study ,Multidisciplinary ,biology ,lcsh:R ,Sequence Analysis, DNA ,biology.organism_classification ,Survival Analysis ,Virology ,Influenza A virus subtype H5N1 ,Disease Models, Animal ,030104 developmental biology ,Influenza in Birds ,RNA, Viral ,lcsh:Q ,Chickens ,Struthio - Abstract
H9N2 subtype avian influenza viruses (AIVs) have been isolated from various species of wild birds and domestic poultry in the world, and occasionally transmitted to humans. Although H9N2 AIVs are seldom isolated from ostriches, seven such strains were isolated from sick ostriches in China between 2013 and 2014. Sequence analysis showed several amino acid changes relating to viral adaptation in mammals were identified. The phylogenetic analyses indicated that these isolates were quadruple reassortant viruses, which are different from the early ostrich isolates from South Africa or Israel. Most of the ostrich virus carried a human-type receptor-binding property. The chicken experiments showed the ostrich strains displayed low pathogenicity, while they could cause mild to severe symptoms in chicken. Theses strains could efficiently transmit among chickens, and one strain showed higher transmissibility. The virus could not kill mice, and merely replicated in the lung of mice. The ostrich strains could not efficiently transmit between guinea pigs in the direct contact model. These results suggested we should pay attention to the interface between ostrich and other domestic fowl, and keep an eye on this population when monitoring of influenza virus.
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- 2018
145. On the distance Laplacian spectral radius of bipartite graphs
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Dandan Fan, Aihong Niu, and Guoping Wang
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Discrete mathematics ,Combinatorics ,Distance matrix ,Spectral radius ,Applied Mathematics ,Vertex connectivity ,Diagonal matrix ,Bipartite graph ,Discrete Mathematics and Combinatorics ,Laplacian matrix ,Laplace operator ,Vertex (geometry) ,Mathematics - Abstract
Suppose that the vertex set of a graph G is V ( G ) = { v 1 , ? , v n } . Then we denote by T r G ( v i ) the sum of distances between v i and other vertices of G . Let T r ( G ) be the n i? n diagonal matrix with its ( i , i ) -entry equal to T r G ( v i ) and D ( G ) be the distance matrix of G . Then L D ( G ) = T r ( G ) - D ( G ) is the distance Laplacian matrix of G . The distance Laplacian spectral radius of G is the spectral radius of L D ( G ) . In this paper we describe the unique graph with minimum distance Laplacian spectral radius among all connected bipartite graphs of order n with a given matching number and a given vertex connectivity, respectively.
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- 2015
146. MicroRNA‑494 suppresses hypoxia/reoxygenation‑induced cardiomyocyte apoptosis and autophagy via the PI3K/AKT/mTOR signaling pathway by targeting SIRT1.
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SHUWEI NING, ZHIYING LI, ZHENYU JI, DANDAN FAN, KEKE WANG, QIAN WANG, LEI HUA, JUNYUE ZHANG, XIANGGUANG MENG, and YIQIANG YUAN
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APOPTOSIS ,LACTATE dehydrogenase ,SUPEROXIDE dismutase ,AUTOPHAGY ,PHOSPHATIDYLINOSITOL 3-kinases ,MYOCARDIAL infarction ,PI3K/AKT/MTOR pathway ,MICRORNA - Abstract
Acute myocardial infarction can be caused by ischemia/reperfusion (I/R) injury; however, the mechanism underlying I/R is not completely understood. The present study investigated the functions and mechanisms underlying microRNA (miR)‑494 in I/R‑induced cardiomyocyte apoptosis and autophagy. Hypoxia/reoxygenation (H/R)‑treated H9c2 rat myocardial cells were used as an in vitro I/R injury model. Apoptosis and autophagy were analyzed by Cell Counting Kit‑8 assay, Lactic dehydrogenase and superoxide dismutase assay, flow cytometry, TUNEL staining and western blotting. Reverse transcription‑quantitative PCR demonstrated that, H9c2 cells treated with 12 h hypoxia and 3 h reoxygenation displayed significantly downregulated miR‑494 expression levels compared with control cells. Compared with the corresponding negative control (NC) groups, miR‑494 mimic reduced H/R‑induced cell apoptosis and autophagy, whereas miR‑494 inhibitor displayed the opposite effects. Silent information regulator 1 (SIRT1) was identified as a target gene of miR‑494. Furthermore, miR‑494 inhibitor‑mediated effects on H/R‑induced cardiomyocyte apoptosis and autophagy were partially reversed by SIRT1 knockdown. Moreover, compared with si‑NC, SIRT1 knockdown significantly increased the phosphorylation levels of PI3K, AKT and mTOR in H/R‑treated and miR‑494 inhibitor‑transfected H9c2 cells. Collectively, the results indicated that miR‑494 served a protective role against H/R‑induced cardiomyocyte apoptosis and autophagy by directly targeting SIRT1, suggesting that miR‑494 may serve as a novel therapeutic target for myocardial I/R injury. [ABSTRACT FROM AUTHOR]
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- 2020
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147. RAID: a comprehensive resource for human RNA-associated (RNA–RNA/RNA–protein) interaction
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Yongfei Hu, Ying Yi, Dong Wang, Mingyue Liu, Jintian Xu, Yuting Wang, Xiaomeng Zhang, Hua Zou, Kongning Li, Yan Huang, Jinxurong Yang, Juanjuan Kang, Kaili Fan, Dandan Fan, Jianzhen Xu, Liqun Chen, Miaoman Bi, Xia Li, Deng Wu, Zhengqiang Miao, Nana Jin, Tingting Dong, Xiang Li, and Puwen Tan
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Bioinformatics ,ComputingMethodologies_SIMULATIONANDMODELING ,RAID ,MathematicsofComputing_NUMERICALANALYSIS ,Gene regulatory network ,Information Storage and Retrieval ,Computational biology ,Biology ,law.invention ,Transcriptome ,User-Computer Interface ,Resource (project management) ,law ,RNA-Protein Interaction ,Interaction network ,TheoryofComputation_ANALYSISOFALGORITHMSANDPROBLEMCOMPLEXITY ,Humans ,Gene Regulatory Networks ,Molecular Biology ,Binding Sites ,Gene Expression Profiling ,Proteins ,RNA ,Functional description ,ComputingMethodologies_PATTERNRECOGNITION ,Databases, Nucleic Acid ,Forecasting ,Protein Binding ,MathematicsofComputing_DISCRETEMATHEMATICS - Abstract
Transcriptomic analyses have revealed an unexpected complexity in the eukaryote transcriptome, which includes not only protein-coding transcripts but also an expanding catalog of noncoding RNAs (ncRNAs). Diverse coding and noncoding RNAs (ncRNAs) perform functions through interaction with each other in various cellular processes. In this project, we have developed RAID (http://www.rna-society.org/raid), an RNA-associated (RNA–RNA/RNA–protein) interaction database. RAID intends to provide the scientific community with all-in-one resources for efficient browsing and extraction of the RNA-associated interactions in human. This version of RAID contains more than 6100 RNA-associated interactions obtained by manually reviewing more than 2100 published papers, including 4493 RNA–RNA interactions and 1619 RNA–protein interactions. Each entry contains detailed information on an RNA-associated interaction, including RAID ID, RNA/protein symbol, RNA/protein categories, validated method, expressing tissue, literature references (Pubmed IDs), and detailed functional description. Users can query, browse, analyze, and manipulate RNA-associated (RNA–RNA/RNA–protein) interaction. RAID provides a comprehensive resource of human RNA-associated (RNA–RNA/RNA–protein) interaction network. Furthermore, this resource will help in uncovering the generic organizing principles of cellular function network.
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- 2014
148. A pH ratiometrically responsive surface enhanced resonance Raman scattering probe for tumor acidic margin delineation and image-guided surgery.
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Wenjia Duan, Qi Yue, Ying Liu, Yunfei Zhang, Qinghua Guo, Cong Wang, Shujie Yin, Dandan Fan, Wenjing Xu, Jiexian Zhuang, Jiachao Gong, Xinwei Li, Ruimin Huang, Liang Chen, Silvio Aime, Zhongliang Wang, Jianfeng Feng, Ying Mao, Xiao-Yong Zhang, and Cong Li
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- 2020
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149. The Impact of Power Structures on Supply Chain Enterprises with Carbon Emission Reduction Decisions
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Dandan, Fan, primary and Qi, Xu, additional
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- 2018
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150. Pyruvate dehydrogenase expression is negatively associated with cell stemness and worse clinical outcome in prostate cancers
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Yaqing Li, Huixiang Li, Jian Liu, Long Yuan, Dandan Fan, Yali Zhong, Zhenyu Ji, Jahn M. Nesland, Xiaoran Li, Yuan Yuan, Dandan Yu, Mariusz Adam Goscinski, Zhenhe Suo, Mingzhi Zhang, Yasai Ji, Xiaoli Li, Jian-Guo Wen, and Bin Hao
- Subjects
0301 basic medicine ,Gerontology ,Oncology ,Male ,medicine.medical_specialty ,Cell ,Blotting, Western ,Kaplan-Meier Estimate ,Polymerase Chain Reaction ,PDHA1 ,03 medical and health sciences ,Prostate cancer ,Gene Knockout Techniques ,stemness ,0302 clinical medicine ,Cancer stem cell ,Prostate ,Internal medicine ,Cell Line, Tumor ,LNCaP ,medicine ,Humans ,Pyruvate Dehydrogenase (Lipoamide) ,Aged ,Aged, 80 and over ,business.industry ,Cancer ,Prostatic Neoplasms ,Middle Aged ,glycolysis ,medicine.disease ,Flow Cytometry ,Prognosis ,prostate cancer ,Immunohistochemistry ,030104 developmental biology ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Cancer cell ,Neoplastic Stem Cells ,business ,Energy source ,Research Paper - Abstract
// Yali Zhong 1, 2, 3, 4 , Xiaoli Li 1 , Yasai Ji 1 , Xiaoran Li 3, 4 , Yaqing Li 1 , Dandan Yu 1 , Yuan Yuan 5 , Jian Liu 6 , Huixiang Li 7 , Mingzhi Zhang 1 , Zhenyu Ji 8 , Dandan Fan 8 , Jianguo Wen 9 , Mariusz Adam Goscinski 10 , Long Yuan 11 , Bin Hao 12 , Jahn M Nesland 3, 4 , Zhenhe Suo 1, 3, 4 1 Department of Oncology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan Province, China 2 Department of Gastroenterology, The Second Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan Province, China 3 Department of Pathology, The Norwegian Radium Hospital, Oslo University Hospital, University of Oslo, Montebello, Oslo, Norway 4 Department of Pathology, Institute for Clinical Medicine, Faculty of Medicine, University of Oslo, Oslo, Norway 5 Department of Pathology, Capital Medical University, Beijing, China 6 Institute of Health Quarantine, Chinese Academy of Inspection and Quarantine, Beijing, China 7 Department of Pathology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan Province, China 8 Henan Academy of Medical and Pharmaceutical Sciences, Zhengzhou University, Zhengzhou 9 Institute of Clinical Medicine, The First Affiliated Hospital of Zhengzhou University, Zhengzhou University, Henan, China 10 Department of Surgery, The Norwegian Radium Hospital, Oslo University Hospital, Oslo, Norway 11 Department of Surgery, The Affiliated Cancer Hospital of Zhengzhou University, Zhengzhou, Henan, China 12 Department of Urology, The Second Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, China Correspondence to: Zhenhe Suo, email: zhenhes@medisin.uio.no Keywords: PDHA1, glycolysis, stemness, prostate cancer Received: September 30, 2016 Accepted: December 28, 2016 Published: January 05, 2017 ABSTRACT Cells generate adenosine-5′-triphosphate (ATP), the major currency for energy-consuming reactions, through mitochondrial oxidative phosphorylation (OXPHOS) and glycolysis. One of the remarkable features of cancer cells is aerobic glycolysis, also known as the “Warburg Effect”, in which cancer cells rely preferentially on glycolysis instead of mitochondrial OXPHOS as the main energy source even in the presence of high oxygen tension. One of the main players in controlling OXPHOS is the mitochondrial gatekeeperpyruvate dehydrogenase complex (PDHc) and its major subunit is E1α (PDHA1). To further analyze the function of PDHA1 in cancer cells, it was knock out (KO) in the human prostate cancer cell line LnCap and a stable KO cell line was established. We demonstrated that PDHA1 gene KO significantly decreased mitochondrial OXPHOS and promoted anaerobic glycolysis, accompanied with higher stemness phenotype including resistance to chemotherapy, enhanced migration ability and increased expression of cancer stem cell markers. We also examined PDHA1 protein expression in prostate cancer tissues by immunohistochemistry and observed that reduced PDHA1 protein expression in clinical prostate carcinomas was significantly correlated with poor prognosis. Collectively, our results show that negative PDHA1 gene expressionis associated with significantly higher cell stemness in prostate cancer cells and reduced protein expression of this gene is associated with shorter clinical outcome in prostate cancers.
- Published
- 2016
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