278 results on '"B‐cell development"'
Search Results
102. Expression of DNA-dependent protein kinase holoenzyme upon induction of lymphocyte differentiation and V(D)J recombination.
- Author
-
GRAWUNDER, Ulf, FINNIE, Nicholas, JACKSON, Stephen P., RIWAR, Brigitte, and JESSBERGER, Rolf
- Subjects
- *
LYMPHOCYTES , *TISSUES , *CELLS , *INTERLEUKINS , *IMMUNOGLOBULINS , *GENE expression , *PROTEIN kinases , *DNA , *PEPTIDES , *CYTOPLASM - Abstract
Murine preB lymphocytes grow in tissue culture in the presence of stromal cells and interleukin 7 (1L-7), and can be induced to differentiate to surface immunoglobulin-positive B cells in vitro by withdrawal of IL-7. Upon differentiation, proliferation ceases, and upregulation of Rag-1 and Rag-2 expression, and induction of V(D)J immunoglobulin-gene rearrangements occur. DNA-dependent protein kinasel (DNA-PK) is required for effective V(D)J recombination and repair of DNA double-strand breaks. The holoenzyme comprises a catalytic subunit (DNA-PKcs) and the Ku heterodimer (Ku70/Ku80). We have analyzed expression of Ku70, Ku80 and DNA-PKcs upon induction of differentiation in preB cells derived from wild-type, severe combined immunodeficiency (SCID) and Rag-2−⁄− mice. Protein levels of Ku80 and Ku70 moderately decrease after induction in all three cell types. A distinct polypeptide that cross-reacts with anti-Ku Ig appears in the cytoplasm of wild-type and Rag-2−⁄− cells, but not of SCID cells. In mouse preB cells, Ku70 and Ku80 are present in the nuclei and cytoplasm before and after onset of differentiation, In vivo Ku70 is predominantly expressed in V(D)J-recombination-active, early-preB and CD4- /CD8- thymocyte cell populations. Upon differentiation, protein levels of DNA PKcs are unaltered. DNA-PK activity, which is not detectable in SCID cells, increases in wild-type and Rag-2−⁄− cells more than twofold shortly after induction of differentiation, then falls back to about 50% of starting levels. [ABSTRACT FROM AUTHOR]
- Published
- 1996
- Full Text
- View/download PDF
103. Dual role of RAG2 in V(D)J recombination: catalysis and regulation of ordered Ig gene assembly.
- Author
-
Kirch, Susan A., Rathbun, Gary A., and Oettinger, Marjorie A.
- Subjects
- *
IMMUNOGLOBULINS , *LYMPHOID tissue , *T cells , *ANTIGENS , *PROTEINS , *CATALYSIS - Abstract
Immunoglobulin genes are assembled during lymphoid development by a series of site-specific rearrangements that are tightly regulated to ensure that functional antibodies are generated in B (but not T) cells and that a unique receptor is present on each cell. Because a common V(D)J recombinase comprising RAG1 and RAG2 proteins is used for both B- and T-cell antigen receptor assembly, lineage-specific rearrangement must be modulated through differential access to sites of recombination. We show here that the C-terminus of the RAG2 protein, although dispensable for the basic recombination reaction and for Ig heavy chain DH to JH joining, is essential for efficient VH to DJH rearrangement at the IgH locus. Thus, the RAG2 protein plays a dual role in V(D)J recombination, acting both in catalysis of the reaction and in governing access to particular loci. [ABSTRACT FROM AUTHOR]
- Published
- 1998
- Full Text
- View/download PDF
104. High RAD51 mRNA levels in young rabbit appendix. A role in B-cell gene conversion?
- Author
-
Schiaffella, Enrico, Fuschiotti, P., Bensinger, S. J., and Mage, R. G.
- Abstract
The rabbit has a limited number of V
H genes that rearrange. As in the chicken, the 3′-most VH 1 gene is rearranged in most B lymphocytes. This laboratory reported that by 6 weeks after birth, diversification of rearranged VH genes occurs, at least in part, by gene conversion-like events in the appendix, suggesting that this organ is a homologue of the avian bursa of Fabricius. Rad51 contributes to the repair of double-strand breaks in DNA during somatic and meiotic recombination. The gene was first identified in lower eukaryotes, and later in vertebrates including chicken, as encoding an Escherichia coli RecA-like protein. We report the cloning and sequencing of RAD51 from the rabbit. Because the chicken bursa was shown to express high levels of RAD51 message, we investigated the expression of RAD51 in the rabbit appendix and other tissues. Using a quantitative polymerase chain reaction mimic assay and conventional northern analyses, we found high RAD51 expression in young rabbit appendix comparable to levels in testis where there is an abundance of meiotic recombination. RAD51 levels were three times higher in appendix B lymphocytes compared with T lymphocytes and were lower in adult appendix, as well as in spleen and Peyer's patches of young rabbits. We measured the levels of message in several appendix cell sub-populations obtained by fluorescence-activated cell sorting and found that sub-populations of B lymphocytes corresponding to different stages of B-cell development as well as B cells undergoing isotype switch did not have significantly different mRNA levels. [ABSTRACT FROM AUTHOR]- Published
- 1998
- Full Text
- View/download PDF
105. Long Non-Coding RNAs Guide the Fine-Tuning of Gene Regulation in B-Cell Development and Malignancy
- Author
-
Mette Dahl, Lasse Sommer Kristensen, and Kirsten Grønbæk
- Subjects
Leukemia, Lymphocytic, Chronic, B-Cell/genetics ,0301 basic medicine ,burkitt lymphoma (BL) ,Burkitt lymphoma (BL) ,Lymphoma, Follicular/genetics ,Chronic lymphocytic leukemia ,Mantle cell lymphoma (MCL) ,Follicular lymphoma ,Lymphoma, Mantle-Cell ,Review ,lcsh:Chemistry ,hemic and lymphatic diseases ,multiple myeloma (MM) ,Multiple myeloma (MM) ,Precursor Cell Lymphoblastic Leukemia-Lymphoma/genetics ,Lymphoma, Follicular ,lcsh:QH301-705.5 ,Spectroscopy ,Regulation of gene expression ,B-Lymphocytes ,long non-coding RNA ,B-cell development ,Cell Transformation, Neoplastic/genetics ,B-Lymphocytes/immunology ,Cell Differentiation ,General Medicine ,Diffuse large b-cell lymphoma (DLBCL) ,Precursor Cell Lymphoblastic Leukemia-Lymphoma ,Burkitt Lymphoma ,Chronic lymphocytic leukemia (CLL) ,Long non-coding RNA ,Computer Science Applications ,Gene Expression Regulation, Neoplastic ,Cell Transformation, Neoplastic ,medicine.anatomical_structure ,RNA, Long Noncoding ,Lymphoma, Large B-Cell, Diffuse ,Multiple Myeloma ,Burkitt Lymphoma/genetics ,Signal Transduction ,Lymphoma, Mantle-Cell/genetics ,Somatic hypermutation ,Multiple Myeloma/genetics ,RNA/genetics ,Acute lymphoblastic leukemia (ALL) ,Biology ,Catalysis ,Inorganic Chemistry ,mantle cell lymphoma (MCL) ,03 medical and health sciences ,acute lymphoblastic leukemia (ALL) ,Circular RNA ,chronic lymphocytic leukemia (CLL) ,medicine ,Humans ,RNA, Long Noncoding/genetics ,Physical and Theoretical Chemistry ,Molecular Biology ,B cell ,Organic Chemistry ,circular RNA ,RNA, Circular ,medicine.disease ,Leukemia, Lymphocytic, Chronic, B-Cell ,Gene regulation ,030104 developmental biology ,diffuse large B-cell lymphoma (DLBCL) ,lcsh:Biology (General) ,lcsh:QD1-999 ,Lymphoma, Large B-Cell, Diffuse/genetics ,Cancer research ,RNA ,Mantle cell lymphoma ,gene regulation - Abstract
With the introduction of next generation sequencing methods, such as RNA sequencing, it has become apparent that alterations in the non-coding regions of our genome are important in the development of cancer. Particularly interesting is the class of long non-coding RNAs (lncRNAs), including the recently described subclass of circular RNAs (circRNAs), which display tissue- and cell-type specific expression patterns and exert diverse regulatory functions in the cells. B-cells undergo complex and tightly regulated processes in order to develop from antigen naïve cells residing in the bone marrow to the highly diverse and competent effector cells circulating in peripheral blood. These processes include V(D)J recombination, rapid proliferation, somatic hypermutation and clonal selection, posing a risk of malignant transformation at each step. The aim of this review is to provide insight into how lncRNAs including circRNAs, participate in normal B-cell differentiation, and how deregulation of these molecules is involved in the development of B-cell malignancies. We describe the prognostic value and functional significance of specific deregulated lncRNAs in diseases such as acute lymphoblastic leukemia, chronic lymphocytic leukemia, mantle cell lymphoma, diffuse large B-cell lymphoma, follicular lymphoma, Burkitt lymphoma and multiple myeloma, and we provide an overview of the current knowledge on the role of circRNAs in these diseases.
- Published
- 2018
- Full Text
- View/download PDF
106. 100 YEARS OF INSULIN: A brief history of diabetes genetics: insights for pancreatic beta-cell development and function.
- Author
-
Ikle JM and Gloyn AL
- Subjects
- Animals, Cell Differentiation genetics, Diabetes Mellitus drug therapy, Diabetes Mellitus history, Genetic Predisposition to Disease, Genomics history, History, 20th Century, History, 21st Century, Humans, Insulin genetics, Insulin therapeutic use, Pancreas embryology, Pancreas growth & development, Pancreas metabolism, Diabetes Mellitus genetics, Insulin history, Insulin-Secreting Cells physiology
- Abstract
Since the discovery of insulin 100 years ago, our knowledge and understanding of diabetes have grown exponentially. Specifically, with regards to the genetics underlying diabetes risk, our discoveries have paralleled developments in our understanding of the human genome and our ability to study genomics at scale; these advancements in genetics have both accompanied and led to those in diabetes treatment. This review will explore the timeline and history of gene discovery and how this has coincided with progress in the fields of genomics. Examples of genetic causes of monogenic diabetes are presented and the continuing expansion of allelic series in these genes and the challenges these now cause for diagnostic interpretation along with opportunities for patient stratification are discussed.
- Published
- 2021
- Full Text
- View/download PDF
107. Emerging roles for long noncoding RNAs in B-cell development and malignancy
- Author
-
Melanie Winkle, Joost Kluiver, A. P. van den Berg, and Arjan Diepstra
- Subjects
0301 basic medicine ,Lymphoma, B-Cell ,SUSCEPTIBILITY LOCI ,Chronic lymphocytic leukemia ,Genome-wide association study ,Computational biology ,8Q24 ABNORMALITY ,Biology ,Bioinformatics ,Malignant transformation ,03 medical and health sciences ,MULTIPLE-MYELOMA ,medicine ,MYC-INDUCED LNCRNA ,Animals ,Humans ,TUMOR-SUPPRESSOR ,GENOME-WIDE ASSOCIATION ,PVT1 REARRANGEMENT ,B-cell lymphoma ,Multiple myeloma ,B cell ,B-Lymphocytes ,B-cell development ,CHRONIC LYMPHOCYTIC-LEUKEMIA ,HODGKINS-LYMPHOMA ,Hematology ,medicine.disease ,Long non-coding RNA ,TRANSCRIPTIONAL NETWORK ,030104 developmental biology ,medicine.anatomical_structure ,The Hallmarks of Cancer ,Oncology ,RNA, Long Noncoding ,Long noncoding RNA - Abstract
Long noncoding (Inc)RNAs have emerged as essential mediators of cellular biology, differentiation and malignant transformation. LncRNAs have a broad range of possible functions at the transcriptional, posttranscriptional and protein level and their aberrant expression significantly contributes to the hallmarks of cancer cell biology. In addition, their high tissue- and cell-type specificity makes lncRNAs especially interesting as biomarkers, prognostic factors or specific therapeutic targets. Here, we review current knowledge on lncRNA expression changes during normal B-cell development, indicating essential functions in the differentiation process. In addition we address lncRNA deregulation in B-cell malignancies, the putative prognostic value of this as well as the molecular functions of multiple deregulated lncRNAs. Altogether, the discussed work indicates major roles for lncRNAs in normal and malignant B cells affecting oncogenic pathways as well as the response to common therapeutics.
- Published
- 2017
108. Regulation of Marginal Zone B-Cell Differentiation by MicroRNA-146a
- Author
-
Dinesh S. Rao, Matteo Pellegrini, Nolan M. Ung, Thilini Fernando, Jorge R. Contreras, Michael O. Alberti, Jennifer K. King, May Paing, and Kelvin Xi Zhang
- Subjects
0301 basic medicine ,Cellular differentiation ,1.1 Normal biological development and functioning ,Immunology ,Notch signaling pathway ,Biology ,Transcriptome ,03 medical and health sciences ,0302 clinical medicine ,Underpinning research ,microRNA ,Genetics ,Immunology and Allergy ,Original Research ,Regulation of gene expression ,Marginal zone B cell differentiation ,B-cell development ,Human Genome ,Marginal zone ,Stem Cell Research ,Phenotype ,notch signaling ,030104 developmental biology ,Medical Microbiology ,030220 oncology & carcinogenesis ,marginal zone B-cells ,gene regulation ,Biotechnology - Abstract
B-cell development in the bone marrow is followed by specification into functional subsets in the spleen, including marginal zone (MZ) B-cells. MZ B-cells are classically characterized by T-independent antigenic responses and require the elaboration of distinct gene expression programs for development. Given their role in gene regulation, it is not surprising that microRNAs are important factors in B-cell development. Recent work demonstrated that deficiency of the NFκB feedback regulator, miR-146a, led to a range of hematopoietic phenotypes, but B-cell phenotypes have not been extensively characterized. Here, we found that miR-146a-deficient mice demonstrate a reduction in MZ B-cells, likely from a developmental block. Utilizing high-throughput sequencing and comparative analysis of developmental stage-specific transcriptomes, we determined that MZ cell differentiation was impaired due to decreases in Notch2 signaling. Our studies reveal miR-146a-dependent B-cell phenotypes and highlight the complex role of miR-146a in the hematopoietic system.
- Published
- 2017
- Full Text
- View/download PDF
109. Natural IgM and the Development of B Cell-Mediated Autoimmune Diseases
- Author
-
Trang T. T. Nguyen and Nicole Baumgarth
- Subjects
0301 basic medicine ,tolerance induction ,1.1 Normal biological development and functioning ,Immunology ,Autoimmune Disease ,Epitope ,Article ,Autoimmune Diseases ,Vaccine Related ,03 medical and health sciences ,B-1 cells ,0302 clinical medicine ,Antigen ,Underpinning research ,Biodefense ,Central tolerance induction ,medicine ,2.1 Biological and endogenous factors ,Immunology and Allergy ,Animals ,Humans ,Aetiology ,B cell ,B-Lymphocytes ,B-cell development ,biology ,Prevention ,Inflammatory and immune system ,030104 developmental biology ,medicine.anatomical_structure ,Immunoglobulin M ,Apoptosis ,Polyclonal antibodies ,IgM-deficiency ,biology.protein ,Bone marrow ,030215 immunology - Abstract
Most serum immunoglobulin M (IgM) is "natural IgM", which is produced apparently spontaneously by a distinct subset of B cells requiring no exogenous antigenic or microbial stimuli. Natural IgM is an evolutionarily conserved molecule and reacts with a variety of epitopes expressed on both self- and non-self antigens. It has long been understood that secreted (s) IgM contributes to the removal of altered self-antigens, such as apoptotic and dying cells. As we outline in this review, it is thought that this sIgM housekeeping function removes potential triggers of autoresponse induction. However, we recently demonstrated an unexpected and distinct role for sIgM in the control of autoreactive B cells: the regulation of bone marrow B cell development. The absence of sIgM blocked pro- to pre- B-cell transition and greatly altered the BCR repertoire of the developing B cells and the peripheral B-cell pools in genetically engineered mice. This finding strongly suggests that IgM is critical for B-cell central tolerance induction. Given that treatment of sIgM-deficient mice with polyclonal IgM corrected these developmental defects, therapeutic application of IgM could be of clinical relevance in the treatment of some B-cell-mediated autoimmune diseases.
- Published
- 2016
110. Identification of checkpoints in human T-cell development using severe combined immunodeficiency stem cells
- Author
-
Martijn H. Brugman, Ingrid L. M. Wolvers-Tettero, Robbert G. M. Bredius, Anna-Sophia Wiekmeijer, Hanna IJspeert, Anton W. Langerak, Mirjam van der Burg, Jacques J.M. van Dongen, Willem E. Fibbe, Karin Pike-Overzet, Frank J. T. Staal, Arjan C. Lankester, and Immunology
- Subjects
0301 basic medicine ,Cellular differentiation ,T-Lymphocytes ,Artemis ,Mice ,Mice, Inbred NOD ,thymus ,Immunology and Allergy ,NSG ,Gene Rearrangement ,B-Lymphocytes ,B-cell development ,Stem Cells ,Hematopoietic Stem Cell Transplantation ,Cell Differentiation ,Lymphoid Progenitor Cells ,IL7RA ,Thymocyte ,medicine.anatomical_structure ,Phenotype ,Antigens, Surface ,Heterografts ,Female ,Stem cell ,Immunoglobulin Heavy Chains ,T cell ,Immunology ,Receptors, Antigen, T-Cell ,Mice, Transgenic ,Thymus Gland ,Biology ,T-cell development ,SCID ,Immunophenotyping ,03 medical and health sciences ,medicine ,Animals ,Humans ,Progenitor cell ,Severe combined immunodeficiency ,medicine.disease ,Hematopoietic Stem Cells ,IL2RG ,adenosine deaminase ,030104 developmental biology ,Mutation ,Cancer research ,Severe Combined Immunodeficiency ,CD5 ,CD8 - Abstract
Background Severe combined immunodeficiency (SCID) represents congenital disorders characterized by a deficiency of T cells caused by arrested development in the thymus. Yet the nature of these developmental blocks has remained elusive because of the difficulty of taking thymic biopsy specimens from affected children. Objective We sought to identify the stages of arrest in human T-cell development caused by various major types of SCID. Methods We performed transplantation of SCID CD34 + bone marrow stem/progenitor cells into an optimized NSG xenograft mouse model, followed by detailed phenotypic and molecular characterization using flow cytometry, immunoglobulin and T-cell receptor spectratyping, and deep sequencing of immunoglobulin heavy chain (IGH) and T-cell receptor δ (TRD) loci. Results Arrests in T-cell development caused by mutations in IL-7 receptor α (IL7RA) and IL-2 receptor γ (IL2RG) were observed at the most immature thymocytes much earlier than expected based on gene expression profiling of human thymocyte subsets and studies with corresponding mouse mutants. T-cell receptor rearrangements were functionally required at the CD4 − CD8 − CD7 + CD5 + stage given the developmental block and extent of rearrangements in mice transplanted with Artemis-SCID cells. The xenograft model used is not informative for adenosine deaminase–SCID, whereas hypomorphic mutations lead to less severe arrests in development. Conclusion Transplanting CD34 + stem cells from patients with SCID into a xenograft mouse model provides previously unattainable insight into human T-cell development and functionally identifies the arrest in thymic development caused by several SCID mutations.
- Published
- 2016
- Full Text
- View/download PDF
111. Identification of an Essential Cytoplasmic Region of Interleukin-7 Receptor α Subunit in B-Cell Development
- Author
-
Taku Kuwabara, Hirotake Kasai, Koichi Nakajima, Motonari Kondo, and Yukihide Matsui
- Subjects
0301 basic medicine ,Cytoplasm ,Myeloid ,Lymphocyte ,Mutant ,Lymphocyte Activation ,Article ,Catalysis ,lcsh:Chemistry ,Interleukin-7 Receptor alpha Subunit ,Inorganic Chemistry ,03 medical and health sciences ,STAT5 Transcription Factor ,medicine ,Protein Interaction Domains and Motifs ,Physical and Theoretical Chemistry ,Interleukin-7 receptor ,lcsh:QH301-705.5 ,Molecular Biology ,Spectroscopy ,B cell ,Cell Proliferation ,chemistry.chemical_classification ,B-Lymphocytes ,interleukin-7 receptor ,B-cell development ,interleukin-7 ,Cell growth ,Organic Chemistry ,Cell Differentiation ,General Medicine ,In vitro ,Computer Science Applications ,Amino acid ,Cell biology ,Protein Transport ,signal transducer and activator of transcription 5 ,030104 developmental biology ,medicine.anatomical_structure ,lcsh:Biology (General) ,lcsh:QD1-999 ,chemistry ,Mutation ,Protein Binding ,Signal Transduction - Abstract
Interleukin-7 (IL-7) is essential for lymphocyte development. To identify the functional subdomains in the cytoplasmic tail of the IL-7 receptor (IL-7R) &alpha, chain, here, we constructed a series of IL-7R&alpha, deletion mutants. We found that IL-7R&alpha, deficient hematopoietic progenitor cells (HPCs) gave rise to B cells both in vitro and in vivo when a wild-type (WT) IL-7R&alpha, chain was introduced, however, no B cells were observed under the same conditions from IL-7R&alpha, deficient HPCs with introduction of the exogenous IL-7R&alpha, subunit, which lacked the amino acid region at positions 414&ndash, 441 (d414&ndash, 441 mutant). Signal transducer and activator of transcription 5 (STAT5) was phosphorylated in cells with the d414&ndash, 441 mutant, similar to that in WT cells, in response to IL-7 stimulation. In contrast, more truncated STAT5 (tSTAT5) was generated in cells with the d414&ndash, 441 mutant than in WT cells. Additionally, the introduction of exogenous tSTAT5 blocked B lymphopoiesis but not myeloid cell development from WT HPCs in vivo. These results suggested that amino acids 414&ndash, 441 in the IL-7R&alpha, chain formed a critical subdomain necessary for the supportive roles of IL-7 in B-cell development.
- Published
- 2018
- Full Text
- View/download PDF
112. Receptors and signaling mechanisms for B-lymphocyte activation, proliferation and differentiation - Insights from both in vivo and in vitro approaches
- Author
-
Lakshmi Srinivasan, Sukanya Shyama Sunder, Solomon F. D. Paul, Ravi Maddaly, Govind M. Pai, Priya Sivaramakrishnan, and Shruti Balaji
- Subjects
Mitogen ,Cellular differentiation ,B-Cell development ,B-cell receptor ,Biophysics ,Biology ,Lymphocyte Activation ,Biochemistry ,In vitro ,Structural Biology ,In vivo ,Genetics ,medicine ,Animals ,Humans ,T independent antigen ,Receptors, Immunologic ,Molecular Biology ,PI3K/AKT/mTOR pathway ,B cell ,Cell Proliferation ,B-Lymphocytes ,Cluster of differentiation ,T-cell receptor ,Cell Differentiation ,Cell Biology ,Cell biology ,medicine.anatomical_structure ,Signal-transduction ,Immunology ,Signal transduction ,Receptor ,Signal Transduction - Abstract
During the last three decades, a number of B-lymphocyte specific surface antigens have been defined some of which may also show activation/differentiation specific expression. Here, we review the various signaling events and the receptor-ligand interactions for B-cell development, activation and differentiation. Our discussion and presentation include reviewing the in vivo and in vitro mechanisms. Focus is on the experiments that give us valuable insights into the B cell signaling mechanisms in vitro. Three significant pathways in B-cell development – c-Kit, FLT-3 and IL-7 signaling pathways are elucidated upon. Both antigen dependent and antigen independent mechanisms of B cell stimulation are also reviewed.
- Published
- 2010
- Full Text
- View/download PDF
113. TLR signaling in B-cell development and activation
- Author
-
Hua, Zhaolin and Hou, Baidong
- Published
- 2013
- Full Text
- View/download PDF
114. Camelid immunoglobulins and nanobody technology
- Author
-
Ulrich Wernery, Viet Nguyen, Hilde Revets, Sergei Tillib, P. De Baetselier, Toya Nath Baral, V. Cortez Retamozzo, Lode Wyns, Gh. Hassanzadeh-Ghassabeh, Stefan Magez, Dirk Saerens, Benoit Stijlemans, E. De Genst, J. Kinne, Heinrich Leonhardt, Ulrich Rothbauer, Serge Muyldermans, Cellular and Molecular Immunology, and Ultrastructure
- Subjects
Single-domain antibody ,Camelus ,medicine.drug_class ,ANTIGEN ,Immunology ,Immunoglobulins ,VHH ,MOUSE ,Monoclonal antibody ,Immunoglobulin light chain ,HEAVY-CHAIN ANTIBODIES ,dromedary ,Antigen ,medicine ,Animals ,Nanotechnology ,heavy-chain antibody ,ONLY ANTIBODY ,llama ,FRAGMENTS ,single-doimain antibody ,Heavy-chain antibody ,Llama ,General Veterinary ,biology ,Biology and Life Sciences ,DROMEDARY ,Primary and secondary antibodies ,Virology ,Molecular biology ,Chemistry ,B-CELL DEVELOPMENT ,biology.protein ,LIGHT-CHAINS ,Antibody ,Genetic Engineering ,Clone (B-cell biology) ,Camelids, New World - Abstract
It is well established that all camelids have unique antibodies circulating in their blood. Unlike antibodies from other species, these special antibodies are devoid of light chains and are composed of a heavy-chain homodimer. These so-called heavy-chain antibodies (HCAbs) are expressed after a V-D-J rearrangement and require dedicated constant gamma-genes. An immune response is raised in these so-called heavy-chain antibodies following classical immunization protocols. These HCAbs are easily purified from serum, and the antigen-binding fragment interacts with parts of the target that are less antigenic to conventional antibodies. Since the antigen-binding site of the dromedary HCAb is comprised in one single domain, referred to as variable domain of heavy chain of HCAb (VHH) or nanobody (Nb), we designed a strategy to clone the Nb repertoire of an immunized dromedary and to select the Nbs with specificity for our target antigens. The monoclonal Nbs are well produced in bacteria, are very stable and highly soluble, and bind their cognate antigen with high affinity and specificity. We have successfully developed recombinant Nbs for research purposes, as probe in biosensors, to diagnose infections, and to treat diseases like cancer or trypanosomosis.
- Published
- 2009
- Full Text
- View/download PDF
115. An extracatalytic function of CD45 in B cells is mediated by CD22
- Author
-
Ammarina Chuwonpad, Julie Zikherman, William C. Raschke, Arthur Weiss, James L. Mueller, Sarah Coughlin, and Mark Noviski
- Subjects
Sialic Acid Binding Ig-like Lectin 2 ,T-Lymphocytes ,Protein tyrosine phosphatase ,Inbred C57BL ,Transgenic ,TCR signaling ,CSK Tyrosine-Protein Kinase ,Mice ,Models ,Receptors ,2.1 Biological and endogenous factors ,CD45 ,Transgenes ,Aetiology ,Tyrosine ,B-Lymphocytes ,Thymocytes ,Multidisciplinary ,B-cell development ,CD22 ,breakpoint cluster region ,Phenotype ,src-Family Kinases ,PNAS Plus ,Antigen ,Signal transduction ,Signal Transduction ,1.1 Normal biological development and functioning ,RNA Splicing ,Naive B cell ,B-cell receptor ,Receptors, Antigen, B-Cell ,Mice, Transgenic ,Biology ,Models, Biological ,BCR signaling ,Underpinning research ,Animals ,Antigens ,Alleles ,B-Cell ,Biological ,Molecular biology ,Mice, Inbred C57BL ,Biocatalysis ,Leukocyte Common Antigens ,Calcium - Abstract
The receptor-like tyrosine phosphatase CD45 regulates antigen receptor signaling by dephosphorylating the C-terminal inhibitory tyrosine of the src family kinases. However, despite its abundance, the function of the large, alternatively spliced extracellular domain of CD45 has remained elusive. We used normally spliced CD45 transgenes either incorporating a phosphatase-inactivating point mutation or lacking the cytoplasmic domain to uncouple the enzymatic and noncatalytic functions of CD45 in lymphocytes. Although these transgenes did not alter T-cell signaling or development irrespective of endogenous CD45 expression, both partially rescued the phenotype of CD45-deficient B cells. We identify a noncatalytic role for CD45 in regulating tonic, but not antigen-mediated, B-cell antigen receptor (BCR) signaling through modulation of the function of the inhibitory coreceptor CD22. This finding has important implications for understanding how naïve B cells maintain tonic BCR signaling while restraining inappropriate antigen-dependent activation to preserve clonal "ignorance.".
- Published
- 2015
- Full Text
- View/download PDF
116. A hypomorphic IgH‐chain allele affects development of B‐cell subsets and favours receptor editing
- Author
-
Brenner, Sven, Drewel, Diana, Steinbart, Thomas, Weisel, Florian, Härtel, Eric, Pötzsch, Sonja, Welzel, Heike, Brandl, Andreas, Yu, Philipp, Mudde, Geert C, Schweizer, Astrid, Nitschke, Lars, and Winkler, Thomas H
- Published
- 2011
- Full Text
- View/download PDF
117. The transcription factor Pax5 regulates its target genes by recruiting chromatin‐modifying proteins in committed B cells
- Author
-
McManus, Shane, Ebert, Anja, Salvagiotto, Giorgia, Medvedovic, Jasna, Sun, Qiong, Tamir, Ido, Jaritz, Markus, Tagoh, Hiromi, and Busslinger, Meinrad
- Published
- 2011
- Full Text
- View/download PDF
118. Grb2 regulates B‐cell maturation, B‐cell memory responses and inhibits B‐cell Ca2+ signalling
- Author
-
Ackermann, Jochen A, Radtke, Daniel, Maurberger, Anna, Winkler, Thomas H, and Nitschke, Lars
- Published
- 2011
- Full Text
- View/download PDF
119. The Structure of Bursa of Fabricius in the Long-Legged Buzzard (Buteo Rufinus): Histological and Histochemical Study
- Author
-
Buket Bakir, Hikmet Altunay, Ebru Karadag Sari, and Nevin Kurtdede
- Subjects
endocrine system ,animal structures ,Chicken Bursa ,Follicle-Associated Epithelium ,bursa of fabricius ,Veterinary medicine ,T-Lymphocytes ,Biology ,long-legged buzzard ,Microscope ,SF600-1100 ,Bursa of Fabricius ,Pigeon Bursa ,Cloacal Bursa ,Tissue ,General Veterinary ,Lymphoid Follicle ,Buteo rufinus ,Anatomy ,biology.organism_classification ,Bursa Fabricii ,Long-legged buzzard ,B-Cell Development ,histochemistry ,bursa of Fabricius ,Immunohistochemical Analysis - Abstract
The bursa of Fabricius (BF) is a lymphoepithelial organ found only in birds. Differences in morphology of BF could play an important role in immune response. The objective of this study was to investigate the histological and histochemical characteristics of the bursa of Fabricius in the long-legged buzzard (Buteo rufinus). The material for the study comprised bursa samples obtained from three long-legged buzzards with permission of the General Directorate of Nature Protection and National Parks (Ankara, Turkey). Briefly, interfollicular epithelium (IFE) was shown to be columnar in shape and not to contain goblet cells. Reticular fibers were located in interfollicular septae. Each lymphoid follicle in the bursa of Fabricius in the long-legged buzzard was remarkably linked to the follicle associated epithelium (FAE). Namely, FAE has been reported to stimulate antibody production by transferring antigens to the medulla and have a leading role in developing of local immune response. Among the others, the species-specific differences in bursa of Fabricius morphology of long-legged buzzard (Buteo rufinus) also might support the continuity of this species in nature.
- Published
- 2015
120. Normal B-1 cell development but defective BCR signaling in LCK/ mice
- Author
-
Cristina Ulivieri, M. Bernardetta Majolini, R. James Matthews, Cosima T. Baldari, and Silvia Valensin
- Subjects
MAP Kinase Signaling System ,Immunology ,B-Lymphocyte Subsets ,Receptors, Antigen, B-Cell ,chemical and pharmacologic phenomena ,Biology ,CD5 Antigens ,Lymphocyte Activation ,BCR signaling ,Tyrosine phosphorylation ,Mice ,chemistry.chemical_compound ,Animals ,Immunology and Allergy ,Phosphorylation ,Peritoneal Cavity ,Mice, Knockout ,B-1 cell ,B-cell development ,Cell growth ,ZAP70 ,Lck ,breakpoint cluster region ,CD28 ,hemic and immune systems ,Mice, Mutant Strains ,Phosphoric Monoester Hydrolases ,Specific Pathogen-Free Organisms ,Cell biology ,Mice, Inbred C57BL ,chemistry ,Lymphocyte Specific Protein Tyrosine Kinase p56(lck) ,Phosphatidylinositol-3,4,5-Trisphosphate 5-Phosphatases ,ras Proteins ,Signal transduction ,Protein Processing, Post-Translational ,Tyrosine kinase ,Spleen ,Signal Transduction - Abstract
Mature B cells are grouped into two major subsets, B-1 and B-2, believed to derive from separate lineages. We have recently shown that B-1 cells, which are characterized by CD5 surface expression, specifically exhibit significant levels of the tyrosine kinase Lck in man. Here we show that also in mice Lck expression is restricted to B-1 cells and address the potential role of Lck in B-1 cell development and activation. Using as a model an Lck-/- mouse, we show that, while dispensable for B-1 cell development, Lck is required for full and sustained activation of the tyrosine phosphorylation and MAP kinase cascades triggered by the BCR in CD5+, B-1 cells. The data suggest a potential role for Lck in the achievement of the higher activation threshold required for productive BCR signaling in B-1 as compared to B-2 cells.
- Published
- 2003
- Full Text
- View/download PDF
121. The B cell antigen receptor controls integrin activity through Btk and PLCy2
- Author
-
Marcel Spaargaren, Esther A. Beuling, Rudolf W. Hendriks, Helen P. Meijer, Mette L. Rurup, Steven T. Pals, Sabine Middendorp, Melanie D. Klok, Faculteit der Geneeskunde, CCA -Cancer Center Amsterdam, Pathology, Pediatrics, and Immunology
- Subjects
Integrins ,Immunology ,B-cell receptor ,Integrin ,Receptors, Antigen, B-Cell ,Vascular Cell Adhesion Molecule-1 ,Article ,Mice ,Phosphatidylinositol 3-Kinases ,LYN ,Agammaglobulinemia ,hemic and lymphatic diseases ,Agammaglobulinaemia Tyrosine Kinase ,Cell Adhesion ,Immunology and Allergy ,Bruton's tyrosine kinase ,Animals ,Humans ,Cell adhesion ,Protein Kinase C ,lymphocyte adhesion ,VCAM-1 ,B-Lymphocytes ,biology ,B-cell development ,B cell adhesion ,Phospholipase C gamma ,X-linked agammaglobulinaemia ,Calcium-Binding Proteins ,Microfilament Proteins ,Protein-Tyrosine Kinases ,Cell biology ,DNA-Binding Proteins ,Integrin alpha M ,germinal center ,Type C Phospholipases ,biology.protein ,Cancer research ,Integrin, beta 6 ,Calcium - Abstract
Integrin-mediated adhesion and B cell antigen receptor (BCR) signaling play a critical role in B cell development and function, including antigen-specific B cell differentiation. Here we show that the BCR controls integrin alpha4beta1 (VLA-4)-mediated adhesion of B cells to vascular cell adhesion molecule-1 and fibronectin. Molecular dissection of the underlying signaling mechanism by a combined biochemical, pharmacological, and genetic approach demonstrates that this BCR-controlled integrin-mediated adhesion requires the (consecutive) activation of Lyn, Syk, phosphatidylinositol 3-kinase, Bruton's tyrosine kinase (Btk), phospholipase C (PLC)gamma2, IP3R-mediated Ca2+ release, and PKC. In contrast, activation of mitogen-activated protein kinase kinase (MEK) or extracellular signal-regulated kinase (ERK) is not required, and simultaneous activation of MEK, ERK, and PKB is not sufficient either. Furthermore, Btk is also involved in the control of integrin-mediated adhesion of preB cells. The control of integrin alpha4beta1-mediated B cell adhesion by the BCR involves cytoskeletal reorganization and integrin clustering. These results reveal a novel function for the BCR and Btk, i.e., regulation of integrin alpha4beta1 activity, thereby providing new insights into the control of B cell development and differentiation, as well as into the pathogenesis of the immunodeficiency disease X-linked agammaglobulineamia (XLA).
- Published
- 2003
122. B-cell development and functions and therapeutic options in adenosine deaminase-deficient patients
- Author
-
Miriam Casiraghi, Mirjam van der Burg, Maria Grazia Roncarolo, Aisha V. Sauer, Maria Pia Cicalese, Alessandro Aiuti, Stefania Giannelli, Davide Montin, Klaus Müller, Maria Carmina Castiello, Lucia Dora Notarangelo, Joris M. van Montfrans, Samantha Scaramuzza, Barbara H. Barendregt, Immacolata Brigida, Jennifer M. Puck, Jacques J.M. van Dongen, Elisabetta Traggiai, Chiara Brombin, Valentina Pistoia, Francesca Ferrua, Brigida, I, Sauer, Av, Ferrua, F, Giannelli, S, Scaramuzza, S, Pistoia, V, Castiello, Mc, Barendregt, Bh, Cicalese, Mp, Casiraghi, M, Brombin, Chiara, Puck, J, Müller, K, Notarangelo, Ld, Montin, D, van Montfrans, Jm, Roncarolo, Mg, Traggiai, E, van Dongen, Jj, van der Burg, M, Aiuti, Alessandro, Pediatrics, and Immunology
- Subjects
congenital, hereditary, and neonatal diseases and abnormalities ,Adolescent ,Allergy ,Adenosine Deaminase ,adenosine deaminase–deficient severe combined immunodeficiency ,Genetic enhancement ,B-cell receptor ,Immunology ,Biology ,Regenerative Medicine ,Article ,Adenosine deaminase ,Gene therapy ,B-Cell Activating Factor ,medicine ,Genetics ,Immunology and Allergy ,2.1 Biological and endogenous factors ,Humans ,antibodies ,Enzyme Replacement Therapy ,Aetiology ,Child ,Preschool ,B cell ,Pediatric ,Severe combined immunodeficiency ,Transplantation ,B-Lymphocytes ,CD40 ,5.2 Cellular and gene therapies ,B-cell development ,Inflammatory and immune system ,Hematopoietic Stem Cell Transplantation ,Hematopoietic stem cell ,nutritional and metabolic diseases ,Infant ,Genetic Therapy ,medicine.disease ,Stem Cell Research ,3. Good health ,adenosine deaminase-deficient severe combined immunodeficiency ,medicine.anatomical_structure ,Child, Preschool ,biology.protein ,Stem Cell Research - Nonembryonic - Non-Human ,Bone marrow ,Development of treatments and therapeutic interventions - Abstract
BACKGROUND:Adenosine deaminase (ADA) deficiency causes severe cellular and humoral immune defects and dysregulation because of metabolic toxicity. Alterations in B-cell development and function have been poorly studied. Enzyme replacement therapy (ERT) and hematopoietic stem cell (HSC) gene therapy (GT) are therapeutic options for patients lacking a suitable bone marrow (BM) transplant donor. OBJECTIVE: We sought to study alterations in B-cell development in ADA-deficient patients and investigate the ability of ERT and HSC-GT to restore normal B-cell differentiation and function. METHODS:Flow cytometry was used to characterize B-cell development in BM and the periphery. The percentage of gene-corrected B cells was measured by using quantitative PCR. B cells were assessed for their capacity to proliferate and release IgM after stimulation. RESULTS:Despite the severe peripheral B-cell lymphopenia, patients with ADA-deficient severe combined immunodeficiency showed a partial block in central BM development. Treatment with ERT or HSC-GT reverted most BM alterations, but ERT led to immature B-cell expansion. In the periphery transitional B cells accumulated under ERT, and the defect in maturation persisted long-term. HSC-GT led to a progressive improvement in B-cell numbers and development, along with increased levels of gene correction. The strongest selective advantage for ADA-transduced cells occurred at the transition from immature to naive cells. B-cell proliferative responses and differentiation to immunoglobulin secreting IgM after B-cell receptor and Toll-like receptor triggering were severely impaired after ERT and improved significantly after HSC-GT. CONCLUSIONS:ADA-deficient patients show specific defects in B-cell development and functions that are differently corrected after ERT and HSC-GT.
- Published
- 2014
- Full Text
- View/download PDF
123. B-cell development in the presence of the MLL/AF4 oncoprotein proceeds in the absence of HOX A7 and HOX A9 expression
- Author
-
Bertrand, F E, Spengeman, J D, Shah, N, and LeBien, T W
- Published
- 2003
- Full Text
- View/download PDF
124. B-cell development and functions and therapeutic options in adenosine deaminase-deficient patients
- Author
-
Brigida, I. (Immacolata), Sauer, A.V. (Aisha), Ferrua, F. (Francesca), Giannelli, S. (Stefania), Scaramuzza, S. (Samantha), Pistoia, V. (Valentina), Castiello, M.C. (Maria Carmina), Barendregt, B.H. (Barbara), Cicalese, M.P. (Maria Pia), Casiraghi, F. (Federica), Brombin, C. (Chiara), Puck, J. (Jennifer), Muller, K. (Karin), Notarangelo, L.D. (Luigi Daniele), Montin, D. (Davide), Montfrans, J.M. (Joris) van, Roncarolo, M.G. (Maria Grazia), Traggiai, E. (Elisabetta), Dongen, J.J.M. (Jacques) van, Burg, M. (Mirjam) van der, Aiuti, A. (Alessandro), Brigida, I. (Immacolata), Sauer, A.V. (Aisha), Ferrua, F. (Francesca), Giannelli, S. (Stefania), Scaramuzza, S. (Samantha), Pistoia, V. (Valentina), Castiello, M.C. (Maria Carmina), Barendregt, B.H. (Barbara), Cicalese, M.P. (Maria Pia), Casiraghi, F. (Federica), Brombin, C. (Chiara), Puck, J. (Jennifer), Muller, K. (Karin), Notarangelo, L.D. (Luigi Daniele), Montin, D. (Davide), Montfrans, J.M. (Joris) van, Roncarolo, M.G. (Maria Grazia), Traggiai, E. (Elisabetta), Dongen, J.J.M. (Jacques) van, Burg, M. (Mirjam) van der, and Aiuti, A. (Alessandro)
- Abstract
Background Adenosine deaminase (ADA) deficiency causes severe cellular and humoral immune defects and dysregulation because of metabolic toxicity. Alterations in B-cell development and function have been poorly studied. Enzyme replacement therapy (ERT) and hematopoietic stem cell (HSC) gene therapy (GT) are therapeutic options for patients lacking a suitable bone marrow (BM) transplant donor. Objective We sought to study alterations in B-cell development in ADA-deficient patients and investigate the ability of ERT and HSC-GT to restore normal B-cell differentiation and function. Methods Flow cytometry was used to characterize B-cell development in BM and the periphery. The percentage of gene-corrected B cells was measured by using quantitative PCR. B cells were assessed for their capacity to proliferate and release IgM after stimulation. Results Despite the severe peripheral B-cell lymphopenia, patients with ADA-deficient severe combined immunodeficiency showed a partial block in central BM development. Treatment with ERT or HSC-GT reverted most BM alterations, but ERT led to immature B-cell expansion. In the periphery transitional B cells accumulated under ERT, and the defect in maturation persisted long-term. HSC-GT led to a progressive improvement in B-cell numbers and development, along with increased levels of gene correction. The strongest selective advantage for ADA-transduced cells occurred at the transition from immature to naive cells. B-cell proliferative responses and differentiation to immunoglobulin secreting IgM after B-cell receptor and Toll-like receptor triggering were severely impaired after ERT and improved significantly after HSC-GT. Conclusions ADA-deficient patients show specific defects in B-cell development and functions that are differently corrected after ERT and HSC-GT.
- Published
- 2014
- Full Text
- View/download PDF
125. Max deletion destabilizes MYC protein and abrogates Eµ- Myc lymphomagenesis.
- Author
-
Mathsyaraja H, Freie B, Cheng PF, Babaeva E, Catchpole JT, Janssens D, Henikoff S, and Eisenman RN
- Subjects
- Active Transport, Cell Nucleus, Animals, Carcinogenesis drug effects, Cell Line, Tumor, Enzyme Inhibitors pharmacology, Gene Deletion, Humans, Indoles pharmacology, Kynurenine genetics, Kynurenine metabolism, Lymphoma physiopathology, Mice, Organoids growth & development, Organoids physiopathology, Oximes pharmacology, Sulfonamides pharmacology, Basic-Leucine Zipper Transcription Factors genetics, Basic-Leucine Zipper Transcription Factors metabolism, Carcinogenesis genetics, Gene Expression Regulation, Neoplastic drug effects, Lymphoma genetics, Proto-Oncogene Proteins c-myc genetics, Proto-Oncogene Proteins c-myc metabolism
- Abstract
Although MAX is regarded as an obligate dimerization partner for MYC, its function in normal development and neoplasia is poorly defined. We show that B-cell-specific deletion of Max has a modest effect on B-cell development but completely abrogates Eµ- Myc- driven lymphomagenesis. While Max loss affects only a few hundred genes in normal B cells, it leads to the global down-regulation of Myc -activated genes in premalignant Eµ- Myc cells. We show that the balance between MYC-MAX and MNT-MAX interactions in B cells shifts in premalignant B cells toward a MYC-driven transcriptional program. Moreover, we found that MAX loss leads to a significant reduction in MYC protein levels and down-regulation of direct transcriptional targets, including regulators of MYC stability. This phenomenon is also observed in multiple cell lines treated with MYC-MAX dimerization inhibitors. Our work uncovers a layer of Myc autoregulation critical for lymphomagenesis yet partly dispensable for normal development., (© 2019 Mathsyaraja et al.; Published by Cold Spring Harbor Laboratory Press.)
- Published
- 2019
- Full Text
- View/download PDF
126. Enhancement of LIN28B-induced hematopoietic reprogramming by IGF2BP3.
- Author
-
Wang S, Chim B, Su Y, Khil P, Wong M, Wang X, Foroushani A, Smith PT, Liu X, Li R, Ganesan S, Kanellopoulou C, Hafner M, and Muljo SA
- Subjects
- Animals, Binding Sites, Cells, Cultured, DNA-Binding Proteins genetics, Mice, MicroRNAs metabolism, Models, Animal, RNA, Messenger metabolism, RNA-Binding Proteins genetics, Cellular Reprogramming genetics, DNA-Binding Proteins metabolism, Gene Regulatory Networks, Hematopoietic Stem Cells physiology, RNA-Binding Proteins metabolism
- Abstract
Fetal hematopoietic stem and progenitor cells (HSPCs) hold promise to cure a wide array of hematological diseases, and we previously found a role for the RNA-binding protein (RBP) Lin28b in respecifying adult HSPCs to resemble their fetal counterparts. Here we show by single-cell RNA sequencing that Lin28b alone was insufficient for complete reprogramming of gene expression from the adult toward the fetal pattern. Using proteomics and in situ analyses, we found that Lin28b (and its closely related paralog, Lin28a) directly interacted with Igf2bp3, another RBP, and their enforced co-expression in adult HSPCs reactivated fetal-like B-cell development in vivo more efficiently than either factor alone. In B-cell progenitors, Lin28b and Igf2bp3 jointly stabilized thousands of mRNAs by binding at the same sites, including those of the B-cell regulators Pax5 and Arid3a as well as Igf2bp3 mRNA itself, forming an autoregulatory loop. Our results suggest that Lin28b and Igf2bp3 are at the center of a gene regulatory network that mediates the fetal-adult hematopoietic switch. A method to efficiently generate induced fetal-like hematopoietic stem cells (ifHSCs) will facilitate basic studies of their biology and possibly pave a path toward their clinical application., (Published by Cold Spring Harbor Laboratory Press.)
- Published
- 2019
- Full Text
- View/download PDF
127. Identification of an Essential Cytoplasmic Region of Interleukin-7 Receptor α Subunit in B-Cell Development.
- Author
-
Kasai, Hirotake, Kuwabara, Taku, Matsui, Yukihide, Nakajima, Koichi, and Kondo, Motonari
- Subjects
- *
CELL membranes , *INTERLEUKIN-7 receptors , *B cells , *STAT proteins , *AMINO acids - Abstract
Interleukin-7 (IL-7) is essential for lymphocyte development. To identify the functional subdomains in the cytoplasmic tail of the IL-7 receptor (IL-7R) α chain, here, we constructed a series of IL-7Rα deletion mutants. We found that IL-7Rα-deficient hematopoietic progenitor cells (HPCs) gave rise to B cells both in vitro and in vivo when a wild-type (WT) IL-7Rα chain was introduced; however, no B cells were observed under the same conditions from IL-7Rα-deficient HPCs with introduction of the exogenous IL-7Rα subunit, which lacked the amino acid region at positions 414–441 (d414–441 mutant). Signal transducer and activator of transcription 5 (STAT5) was phosphorylated in cells with the d414–441 mutant, similar to that in WT cells, in response to IL-7 stimulation. In contrast, more truncated STAT5 (tSTAT5) was generated in cells with the d414–441 mutant than in WT cells. Additionally, the introduction of exogenous tSTAT5 blocked B lymphopoiesis but not myeloid cell development from WT HPCs in vivo. These results suggested that amino acids 414–441 in the IL-7Rα chain formed a critical subdomain necessary for the supportive roles of IL-7 in B-cell development. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
128. Long Non-Coding RNAs Guide the Fine-Tuning of Gene Regulation in B-Cell Development and Malignancy.
- Author
-
Dahl, Mette, Kristensen, Lasse Sommer, and Grønbæk, Kirsten
- Subjects
- *
NON-coding RNA , *GENETIC regulation , *B cells , *CANCER , *CELL differentiation - Abstract
With the introduction of next generation sequencing methods, such as RNA sequencing, it has become apparent that alterations in the non-coding regions of our genome are important in the development of cancer. Particularly interesting is the class of long non-coding RNAs (lncRNAs), including the recently described subclass of circular RNAs (circRNAs), which display tissue- and cell-type specific expression patterns and exert diverse regulatory functions in the cells. B-cells undergo complex and tightly regulated processes in order to develop from antigen naïve cells residing in the bone marrow to the highly diverse and competent effector cells circulating in peripheral blood. These processes include V(D)J recombination, rapid proliferation, somatic hypermutation and clonal selection, posing a risk of malignant transformation at each step. The aim of this review is to provide insight into how lncRNAs including circRNAs, participate in normal B-cell differentiation, and how deregulation of these molecules is involved in the development of B-cell malignancies. We describe the prognostic value and functional significance of specific deregulated lncRNAs in diseases such as acute lymphoblastic leukemia, chronic lymphocytic leukemia, mantle cell lymphoma, diffuse large B-cell lymphoma, follicular lymphoma, Burkitt lymphoma and multiple myeloma, and we provide an overview of the current knowledge on the role of circRNAs in these diseases. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
129. Bone marrow B cell precursor number after allogeneic stem cell transplantation and GVHD development
- Author
-
Cherie H. Dunphy, Yuri Fedoriw, Jonathan S. Serody, Stefanie Sarantopoulos, Thomas C. Shea, Allison M. Deal, T. Danielle Samulski, and Andrew Sharf
- Subjects
Male ,Transplantation Conditioning ,medicine.medical_treatment ,Graft vs Host Disease ,Autoimmunity ,Hematopoietic stem cell transplantation ,Graft-versus-host disease ,0302 clinical medicine ,immune system diseases ,hemic and lymphatic diseases ,B-Cell Activating Factor ,Longitudinal Studies ,0303 health sciences ,Leukemia ,B-cell development ,Lymphopoiesis ,Hematology ,Middle Aged ,3. Good health ,medicine.anatomical_structure ,Female ,Steroids ,Stem cell ,Adult ,Adolescent ,Immunology ,Antineoplastic Agents ,Article ,03 medical and health sciences ,medicine ,Humans ,Transplantation, Homologous ,Lymphocyte Count ,B cell ,030304 developmental biology ,Aged ,Transplantation ,business.industry ,Precursor Cells, B-Lymphoid ,PAX5 Transcription Factor ,medicine.disease ,Bone marrow ,business ,Biomarkers ,030215 immunology ,Stem Cell Transplantation - Abstract
Patients without chronic graft-versus-host disease (cGVHD) have robust B cell reconstitution and are able to maintain B cell homeostasis after allogeneic hematopoietic stem cell transplantation (HSCT). To determine whether B lymphopoiesis differs before cGVHD develops, we examined bone marrow (BM) biopsies for terminal deoxynucleotidyl transferase (TdT) and PAX5 immunostaining early post-HSCT at day 30 when all patients have been shown to have high B cell activating factor (BAFF) levels. We found significantly greater numbers of BM B cell precursors in patients who did not develop cGVHD compared with those who developed cGVHD (median = 44 vs 2 cells/high powered field [hpf]; respectively; P < .001). Importantly, a significant increase in precursor B cells was maintained when patients receiving high-dose steroid therapy were excluded (median = 49 vs 20 cells/hpf; P = .017). Thus, we demonstrate the association of BM B cell production capacity in human GVHD development. Increased BM precursor B cell number may serve to predict good clinical outcome after HSCT.
- Published
- 2012
130. Activation-induced cytidine deaminase (AID) is strongly expressed in the fetal bovine ileal Peyer's patch and spleen and is associated with expansion of the primary antibody repertoire in the absence of exogenous antigens
- Author
-
J S Knight, Anna Ekman, A Pernthaner, Jenni Maria Liljavirta, Mikael Niku, Antti Iivanainen, Departments of Faculty of Veterinary Medicine, Veterinary Biosciences, Veterinary Anatomy and Developmental Biology, and Developmental interactions
- Subjects
education ,Immunology ,Amino Acid Motifs ,DIVERSITY ,Somatic hypermutation ,413 Veterinary science ,03 medical and health sciences ,Negative selection ,Peyer's Patches ,0302 clinical medicine ,Fetus ,Ileum ,Cytidine Deaminase ,Activation-induced (cytidine) deaminase ,medicine ,Immunology and Allergy ,Animals ,IMMUNOGLOBULIN REPERTOIRE ,Framework region ,Clonal Selection, Antigen-Mediated ,DNA-POLYMERASE-ETA ,030304 developmental biology ,0303 health sciences ,biology ,GENE SOMATIC HYPERMUTATION ,Peyer's patch ,Cytidine deaminase ,BOS-TAURUS ,Molecular biology ,Complementarity Determining Regions ,CONVERSION ,B-CELL DEVELOPMENT ,medicine.anatomical_structure ,SHEEP ,Antibody Formation ,Mutation ,biology.protein ,Immunoglobulin heavy chain ,Cattle ,DIVERSIFICATION ,Somatic Hypermutation, Immunoglobulin ,IGHV@ ,Immunoglobulin Heavy Chains ,Spleen ,030215 immunology ,Antibody Diversity - Abstract
Due to a limited range of immunoglobulin (Ig) genes, cattle and several other domestic animals rely on postrecombinatorial amplification of the primary repertoire. We report that activation-induced cytidine deaminase (AID) is strongly expressed in the fetal bovine ileal Peyer's patch and spleen but not in fetal bone marrow. The numbers of IGHV (immunoglobulin heavy chain variable) mutations correlate with AID expression. The mutational profile in the fetuses is similar to postnatal and immunized calves, with targeting of complementarity-determining region (CDR) over framework region (FR), preference of replacement over silent mutations in CDRs but not in FRs, and targeting of the AID hotspot motif RGYW/WRCY. Statistical analysis indicates negative selection on FRs and positive selection on CDRs. Our results suggest that AID-mediated somatic hypermutation and selection take place in bovine fetuses, implying a role for AID in the diversification of the primary antibody repertoire in the absence of exogenous antigens.
- Published
- 2012
131. Glycotranscriptome study reveals an enzymatic switch modulating glycosaminoglycan synthesis during B-cell development and activation
- Author
-
Sophie Duchez, Michel Cogné, Chantal Jayat-Vignoles, Virginie Pascal, Nadine Cogné, Raymond Julien, Contrôle de la Réponse Immune B et des Lymphoproliférations (CRIBL), Université de Limoges (UNILIM)-Génomique, Environnement, Immunité, Santé, Thérapeutique (GEIST FR CNRS 3503)-Centre National de la Recherche Scientifique (CNRS), Unité de Génétique Moléculaire Animale (UMR GMA), Institut National de la Recherche Agronomique (INRA)-Université de Limoges (UNILIM), This work was supported by grants from Ligue Nationale contre le Cancer, Institut National du Cancer and Conseil Régional du Limousin., Physiologie Moléculaire de la Réponse Immune et des Lymphoproliférations (PMRIL), Université de Limoges (UNILIM), Centre National de la Recherche Scientifique (CNRS)-Université de Limoges (UNILIM)-Génomique, Environnement, Immunité, Santé, Thérapeutique (GEIST FR CNRS 3503), Unité de Génétique Moléculaire Animale (UGMA), and Université de Limoges (UNILIM)-Institut National de la Recherche Agronomique (INRA)
- Subjects
Transgene ,[SDV]Life Sciences [q-bio] ,Cell ,Immunoglobulins ,Mice, Transgenic ,Biology ,Lymphocyte Activation ,N-Acetylglucosaminyltransferases ,Cell Line ,immunology ,Mice ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Cell Line, Tumor ,Gene expression ,medicine ,Animals ,Immunology and Allergy ,Chondroitin ,Chondroitin sulfate ,B cell ,b-cell development ,Glycosaminoglycans ,030304 developmental biology ,B-Lymphocytes ,0303 health sciences ,Tumor Suppressor Proteins ,animal model ,Chondroitin Sulfates ,030302 biochemistry & molecular biology ,Genetic Variation ,Cell Differentiation ,Heparan sulfate ,b cell ,Mice, Inbred C57BL ,medicine.anatomical_structure ,chemistry ,Biochemistry ,Cell culture ,cell surface molecule ,N-Acetylgalactosaminyltransferases ,[SDV.IMM]Life Sciences [q-bio]/Immunology ,Heparitin Sulfate ,030215 immunology - Abstract
International audience; B-cell fate and responses are modulated by soluble mediators and direct cellular interactions. Migration properties also vary during differentiation, commitment and activation. In many cells, modulation of responses to stimuli involves cell surface glycans, whose architecture depends on the simultaneous expression of multiple enzymes. By looking at the glycosylation-related gene expression patterns among B cell populations, we determined in this study that the strongest variations were observed for CSGalNAcT-1 and EXTL1. These are enzymes involved in the biosynthesis of alternative forms of glycosaminoglycans, namely chondroitin sulphate and heparan sulphate respectively. These two enzymes showed inverse fluctuations in progenitors, resting B cells and activated B cells, suggesting a developmentally regulated switch between chondroitin and heparan sulphate synthesis. To explore whether these variations contributed to optimal B cell differentiation, we over-expressed EXTL1 in the B-cell lineage of transgenic mice, yielding a partial differentiation blockade at the pro-B to pre-B transition. In the periphery, this defect was almost fully compensated for in vivo, with normal-size B-cell compartments and normal serum immunoglobulin levels in the transgenic EXTL1 mice. The peripheral B cells from EXTL1 transgenics were only affected with regard to their in vitro responses to polyclonal activation, showing reduced proliferation. Together the data suggest that, despite their low amounts in lymphocytes, the heparan sulphate chains decorating the endogenous glycosaminoglycans appear to be regulators of B-cell physiology.
- Published
- 2011
- Full Text
- View/download PDF
132. A novel N-ethyl-N-nitrosourea-induced mutation in phospholipase Cγ2 causes inflammatory arthritis, metabolic defects, and male infertility in vitro in a murine model
- Author
-
Thure Adler, Yoshie Kametani, Eckhard Wolf, Matthias Klaften, Philipp Yu, Wolfgang Wurst, Ilona Mossbrugger, Birgit Rathkolb, Dian Soewarto, Jan Rozman, Auke Boersma, Julia Calzada-Wack, Sibylle Wagner, Svetoslav Kalaydjiev, Shin Shimada, Koichiro Abe, Valerie Gailus-Durner, Miriam Maraslioglu, Jerzy Adamski, Matilda Katan, Irene Esposito, Susan Marschall, Martin Klingenspor, Helmut Fuchs, Cornelia Prehn, Wolfgang Hans, Martin Hrabě de Angelis, and Dirk H. Busch
- Subjects
Male ,Candidate gene ,Inflammatory arthritis ,Immunology ,Mutant ,pharmacology [Ethylnitrosourea] ,Mutagenesis (molecular biology technique) ,Inflammation ,Biology ,medicine.disease_cause ,Polymorphism, Single Nucleotide ,Mice ,Immune system ,Rheumatology ,medicine ,Immunology and Allergy ,Missense mutation ,Animals ,Pharmacology (medical) ,genetics [Arthritis, Experimental] ,ddc:610 ,genetics [Sperm Motility] ,Infertility, Male ,Mutation ,genetics [Body Composition] ,Phospholipase C gamma ,medicine.disease ,Flow Cytometry ,Molecular biology ,Arthritis, Experimental ,Mice, Mutant Strains ,drug effects [Mutation] ,Pleckstrin-homology domain ,Nnu-mouse-mutagenesis ,B-cell development ,Phenotypic characterization ,Tyrosine kinase ,Mutant mice ,Genome-wide ,ALI18 ,PLC-gamma-2 ,Involvement ,genetics [Phospholipase C gamma] ,Mutagenesis ,Ethylnitrosourea ,genetics [Infertility, Male] ,Body Composition ,Sperm Motility ,drug effects [Mutagenesis] ,medicine.symptom - Abstract
Objective It is difficult to identify a single causative factor for inflammatory arthritis because of the multifactorial nature of the disease. This study was undertaken to dissect the molecular complexity of systemic inflammatory disease, utilizing a combined approach of mutagenesis and systematic phenotype screening in a murine model. Methods In a large-scale N-ethyl-N-nitrosourea mutagenesis project, the Ali14 mutant mouse strain was established because of dominant inheritance of spontaneous swelling and inflammation of the hind paws. Genetic mapping and subsequent candidate gene sequencing were conducted to find the causative gene, and systematic phenotyping of Ali14/+ mice was performed in the German Mouse Clinic. Results A novel missense mutation in the phospholipase Cγ2 gene (Plcg2) was identified in Ali14/+ mice. Because of the hyperreactive external entry of calcium observed in cultured B cells and other in vitro experiments, the Ali14 mutation is thought to be a novel gain-of-function allele of Plcg2. Findings from systematic screening of Ali14/+ mice demonstrated various phenotypic changes: an abnormally high T cell:B cell ratio, up-regulation of Ig, alterations in body composition, and a reduction in cholesterol and triglyceride levels in peripheral blood. In addition, spermatozoa from Ali14/+ mice failed to fertilize eggs in vitro, despite the normal fertility of the Ali14/+ male mice in vivo. Conclusion These results suggest that the Plcg2-mediated pathways play a crucial role in various metabolic and sperm functions, in addition to initiating and maintaining the immune system. These findings may indicate the importance of the Ali14/+ mouse strain as a model for systemic inflammatory diseases and inflammation-related metabolic changes in humans.
- Published
- 2011
- Full Text
- View/download PDF
133. Ikaros in immune receptor signaling, lymphocyte differentiation, and function
- Author
-
Matthias Merkenschlager
- Subjects
animal diseases ,B-Cell development ,Biophysics ,chemical and pharmacologic phenomena ,Immune receptor ,Biology ,medicine.disease_cause ,Biochemistry ,Autoimmunity ,Blood cell ,Ikaros Transcription Factor ,Immune system ,Cell cycle progression ,Structural Biology ,Transcription factors ,Genetics ,medicine ,Humans ,Ikaros ,Lymphocytes ,Receptors, Immunologic ,Molecular Biology ,Transcription factor ,Lymphocyte differentiation ,Cell Differentiation ,Cell Biology ,biochemical phenomena, metabolism, and nutrition ,Cell biology ,Haematopoiesis ,medicine.anatomical_structure ,Pre-B cell receptor ,bacteria ,Function (biology) ,Signal Transduction - Abstract
Ikaros is the founding member of a family of transcription factors. Ikaros proteins are required for the normal development of lymphocytes and other blood cell lineages, and have an important role in haematopoietic malignancies. Accumulating data link Ikaros to immune receptor rearrangement and signaling, and the balance between proliferation and differentiation of immune cells. The emerging picture is that Ikaros family members are critical for a functional immune system that confers protection against invading pathogens, while minimising the risk of leukaemic transformation, immune pathology, and autoimmunity.
- Published
- 2010
134. The Influence of B-cell Tolerance on Humoral Immunity to HIV-1
- Author
-
Holl, Thomas Matthew and Zhuang, Yuan
- Subjects
B cell ,Humoral Immunity ,Health Sciences, Immunology ,HIV-1 ,B-cell Tolerance ,B-cell Development ,MPER - Abstract
Several HIV-1 neutralizing antibodies (e.g. 2F5, 4E10) have been shown to react with self-antigens, suggesting that effective humoral responses to HIV-1 may be constrained by the tolerization of HIV-reactive B cells that also recognize self-antigens. I have tracked the development of 2F5-like HIV-1 gp41 membrane proximal external region (MPER)-reactive B cells throughout ontogeny using B-cell tetramer reagents. In BL/6 mice, MPER-binding populations are lost during normal B-cell development and immunization with HIV-1 MPER antigen does not elicit robust humoral responses. I have identified Kynureninase as a self-antigen that is recognized by 2F5 antibody and, therefore, is a molecule that could mediate the developmental loss of B cells reactive to an epitope shared by HIV gp41 and Kynureninase. To recover these MPER-reactive cells, I describe and characterize a stromal-cell independent culture system that efficiently supports pro-B cell to IgM+ B-cell development with near normal levels of IgH and Igkappa diversity. B-cell development in vitro closely follows the patterns of development in vivo with culture derived (CD) B cells demonstrating characteristic patterns of surface antigen expression and gene activation. Immature and transitional B-cell compartments are reduced, due to the induction of tolerance, in the bone marrow of 3H9 IgH knockin mice ; however, cultures of 3H9 IgH knockin pro-B cells yields high frequencies of "forbidden", autoreactive IgM+ B cells. Furthermore, serum IgG autoantibody exceeded that present in autoimmune, C4-/- animals following the reconstitution of RAG-1-/- mice with IgM+ CD cells derived from BL/6 mice. I show that HIV-1 MPER-reactive B cells are recovered from both BL/6 and 2F5 IgH knockin bone marrow using this in vitro culture system. RAG-1-/- mice reconstituted with these culture-derived B and T cells generate strong germinal center and antibody responses to HIV-1 MPER antigens. These data demonstrate that the humoral immune response to this HIV-1 gp41 MPER antigen can be restored in mice when the constraints of B-cell tolerance have been relaxed.
- Published
- 2010
135. Gene expression patterns associated with chicken jejunal development
- Author
-
Dirkjan Schokker, Johanna M.J. Rebel, A.J.W. Hoekman, and Mari A. Smits
- Subjects
Microarray ,Organogenesis ,Immunology ,Biology ,Animal Breeding and Genomics ,amino-acid-sequence ,Models, Biological ,Transcriptome ,Immune system ,Cell Movement ,Innate response ,Gene expression ,Animals ,Fokkerij en Genomica ,dendritic cells ,immune-responses ,Gene ,Peptide sequence ,innate immunity ,b-cell development ,t-cells ,Oligonucleotide Array Sequence Analysis ,Genetics ,Innate immune system ,Gene Expression Profiling ,scavenger receptors ,Gene Expression Regulation, Developmental ,Cell Differentiation ,Immunity, Innate ,small-intestine ,Jejunum ,adapter protein slp-76 ,WIAS ,CVI - Divisie Bacteriologie en TSE's ,gastrointestinal-tract ,Chickens ,Wageningen Livestock Research ,Developmental Biology - Abstract
Jejunal development occurs in a spatio-temporal pattern and is characterized by morphological and functional changes. To investigate jejunal development at the transcriptomic level, we performed microarray studies in 1–21-day-old chickens. Nine gene clusters were identified, each with a specific gene expression pattern. Subsequently, groups of genes with similar functions could be identified. Genes involved in morphological and functional development were highly expressed immediately after hatch with declining expression patterns afterwards. Immunological development can be roughly divided based on expression patterns into three processes over time; first innate response and immigration of immune cells, secondly differentiation and specialization, and thirdly maturation and immune regulation. We conclude that specific gene expression patterns coincide with the immunological, morphological, and functional development as measured by other methods. Our data show that transcriptomic approaches provide more detailed information on the biological processes underlying jejunal development.
- Published
- 2009
136. Characterization of an Oct1 orthologue in the channel catfish, Ictalurus punctatus: A negative regulator of immunoglobulin gene transcription?
- Author
-
David Ross, Norman W. Miller, Corine P. Kruiswijk, Melanie Wilson, Gregory W. Warr, Jun-ichi Hikima, and Mara L. Lennard
- Subjects
oct-1-deficient mice ,Transcription, Genetic ,Mice ,0302 clinical medicine ,Genes, Reporter ,stimulate transcription ,Catfishes ,Phylogeny ,b-cell development ,B-Lymphocytes ,0303 health sciences ,Genes, Immunoglobulin ,lcsh:Cytology ,helix-loop-helix ,Organic Cation Transporter 1 ,TCF4 ,030220 oncology & carcinogenesis ,functional preference ,Research Article ,Catfish ,constant-region gene ,animal structures ,lcsh:QH426-470 ,Molecular Sequence Data ,E-box ,Celbiologie en Immunologie ,Biology ,Transfection ,activation domains ,Cell Line ,03 medical and health sciences ,ig heavy-chain ,Sp3 transcription factor ,Animals ,Amino Acid Sequence ,octamer-binding proteins ,lcsh:QH573-671 ,Enhancer ,Molecular Biology ,Transcription factor ,030304 developmental biology ,Sequence Homology, Amino Acid ,fungi ,Promoter ,DNA-binding domain ,Molecular biology ,Protein Structure, Tertiary ,lcsh:Genetics ,Cell Biology and Immunology ,WIAS ,pou domain - Abstract
Background The enhancer (Eμ3') of the immunoglobulin heavy chain locus (IGH) of the channel catfish (Ictalurus punctatus) has been well characterized. The functional core region consists of two variant Oct transcription factor binding octamer motifs and one E-protein binding μE5 site. An orthologue to the Oct2 transcription factor has previously been cloned in catfish and is a functionally active transcription factor. This study was undertaken to clone and characterize the Oct1 transcription factor, which has also been shown to be important in driving immunoglobulin gene transcription in mammals. Results An orthologue of Oct1, a POU family transcription factor, was cloned from a catfish macrophage cDNA library. The inferred amino acid sequence of the catfish Oct1, when aligned with other vertebrate Oct1 sequences, revealed clear conservation of structure, with the POU specific subdomain of catfish Oct1 showing 96% identity to that of mouse Oct1. Expression of Oct1 was observed in clonal T and B cell lines and in all tissues examined. Catfish Oct1, when transfected into both mammalian (mouse) and catfish B cell lines, unexpectedly failed to drive transcription from three different octamer-containing reporter constructs. These contained a trimer of octamer motifs, a fish V H promoter, and the core region of the catfish Eμ3' IGH enhancer, respectively. This failure of catfish Oct1 to drive transcription was not rescued by human BOB.1, a co-activator of Oct transcription factors that stimulates transcription driven by catfish Oct2. When co-transfected with catfish Oct2, Oct1 reduced Oct2 driven transcriptional activation. Electrophoretic mobility shift assays showed that catfish Oct1 (native or expressed in vitro) bound both consensus and variant octamer motifs. Putative N- and C-terminal activation domains of Oct1, when fused to a Gal4 DNA binding domain and co-transfected with Gal4-dependent reporter constructs were transcriptionally inactive, which may be due in part to a lack of residues associated with activation domain function. Conclusion An orthologue to mammalian Oct1 has been found in the catfish. It is similar to mammalian Oct1 in structure and expression. However, these results indicate that the physiological functions of catfish Oct1 differ from those of mammalian Oct1 and include negative regulation of transcription.
- Published
- 2007
137. The First B-Cell Tolerance Checkpoint in Mice and Humans: Control by AID.
- Author
-
Kuraoka M, Meffre E, and Kelsoe G
- Subjects
- Animals, Antibody Formation, Cytidine Deaminase genetics, Gene Expression Regulation, Developmental, Humans, Immune Tolerance genetics, Lymphocyte Activation, Mice, Receptor Cross-Talk, Receptors, Antigen, B-Cell metabolism, Signal Transduction, Toll-Like Receptors metabolism, B-Lymphocytes physiology, Cytidine Deaminase metabolism, Germinal Center immunology, Precursor Cells, B-Lymphoid physiology
- Abstract
Activation-induced cytidine deaminase (AID) expression in the germinal center response drives the immunoglobulin class-switch recombination and V(D)J hypermutation necessary for efficacious, high-affinity antibody responses. That AID is expressed in developing lymphocytes is less well known, but represents an evolutionarily conserved pattern of lymphocyte development that is represented in all vertebrate species. Here we review the role of early, developmentally regulated AID expression in mice and humans and its role in establishing the first B-cell tolerance checkpoint. This newly recognized component of central tolerance requires coordinate signaling by poly- or autoreactive B-cell antigen receptors and endosomal Toll-like receptors. These signals synergize to upregulate AID expression in immature and transitional B cells to levels that approach that of germinal center B cells with the result of caspase 3-mediated cell death. In this review, we discuss the origins and mechanism of this interesting collaboration between adaptive and innate receptors to purge the primary B-cell repertoire of self-reactivity and how it may be related to receptor editing, the other major mechanism for central tolerance., (© 2018 Elsevier Inc. All rights reserved.)
- Published
- 2018
- Full Text
- View/download PDF
138. Characterization of an Oct1 orthologue in the channel catfish, Ictalurus punctatus: A negative regulator of immunoglobulin gene transcription?
- Author
-
Lennard, M.L., Hikima, J.I., Ross, D.A., Kruiswijk, C.P., Wilson, M.R., Miller, N.W., Warr, G.W., Lennard, M.L., Hikima, J.I., Ross, D.A., Kruiswijk, C.P., Wilson, M.R., Miller, N.W., and Warr, G.W.
- Abstract
Background - The enhancer (E¿3') of the immunoglobulin heavy chain locus (IGH) of the channel catfish (Ictalurus punctatus) has been well characterized. The functional core region consists of two variant Oct transcription factor binding octamer motifs and one E-protein binding ¿E5 site. An orthologue to the Oct2 transcription factor has previously been cloned in catfish and is a functionally active transcription factor. This study was undertaken to clone and characterize the Oct1 transcription factor, which has also been shown to be important in driving immunoglobulin gene transcription in mammals. Results - An orthologue of Oct1, a POU family transcription factor, was cloned from a catfish macrophage cDNA library. The inferred amino acid sequence of the catfish Oct1, when aligned with other vertebrate Oct1 sequences, revealed clear conservation of structure, with the POU specific subdomain of catfish Oct1 showing 96% identity to that of mouse Oct1. Expression of Oct1 was observed in clonal T and B cell lines and in all tissues examined. Catfish Oct1, when transfected into both mammalian (mouse) and catfish B cell lines, unexpectedly failed to drive transcription from three different octamer-containing reporter constructs. These contained a trimer of octamer motifs, a fish VH promoter, and the core region of the catfish E¿3' IGH enhancer, respectively. This failure of catfish Oct1 to drive transcription was not rescued by human BOB.1, a co-activator of Oct transcription factors that stimulates transcription driven by catfish Oct2. When co-transfected with catfish Oct2, Oct1 reduced Oct2 driven transcriptional activation. Electrophoretic mobility shift assays showed that catfish Oct1 (native or expressed in vitro) bound both consensus and variant octamer motifs. Putative N- and C-terminal activation domains of Oct1, when fused to a Gal4 DNA binding domain and co-transfected with Gal4-dependent reporter constructs were transcriptionally inactive, which may be due in p
- Published
- 2007
139. Development of Ig secreting cells in mMT/mMT BALB/c mice
- Author
-
Hasan, Milena, Krmpotić, Astrid, Čičin-Šain, Luka, Bralić, Marina, Polić, Bojan, Jonjić, Stipan, and Rabatić, Sabina
- Subjects
mental disorders ,mMT/mMT mutation ,BALB/c mice ,B-cell development - Abstract
The m chain together with the surrogate light chain (lambda 5 + V pre-B) forms the pre-B cell receptor (pre-BCR)on the surface of pre-B cells before the assembly of the complete Ig molecule. The pre-BCR expression on the pre-B cells and formation of the surface IgM molecules, after the light chain rearragement on immature B cells are key checkpoints in the development of mature B lymphocytes. Ig class switch and the subsequent expresion of other Ig classes occurs only in mature B cells, after they have undergone germinal center reaction in the secondary lymphoid organs. Therefore, the disruption of the membrane exone of Ig m chain genes blocks the B cell development at the pre-B stage. C57BL/6 mice homozygous for this mutation (mMT/mMT C57BL/6)are unable to generate immature and mature B cells and subsequently lack Ig in their sera (Kitamura et al., Nature, 350, 423-426, 1991.). We have backcrossed the mMT mutation onto BALB/c mice. The offspring homozygous for the mutation (mMT/mMT BALB/c) were tested for the presence of immunoglobulins. Surprisingly, although unable to produce IgM, the mMT/mMT BALB/c mice had high levels of IgG in their sera. Further experiments showed the presence of different Ig classes and subclasses. Despite the IgG presence mMT/mMT BALB/c mice could not generate a specific antibody response. The spleen ad lymph node architecture of mMT/mMT C57BL/6 and mMT/mMT BALB/c mice was similar. Both strains lacked lymphatic follicles in the spleen and lymph nodes, yet anti mouse Ig-POD labeled antibodies stained cells scattered throughout the lymphatic organs of mMT/mMT BALB/c mice. In addition, the Ig positive cells were found also in the lamina propria of the intestinal mucosa. The presence of serum Ig and Ig positive cells strongly suggests that the developmental block at the pre-B cell stage is leaky in mMT/mMT BALB/c mice. The cause of this leakage could be attributed to occasional early class switch events. Our next aim is to clarify the underlaying mechanism of this phenotype.
- Published
- 1999
140. Identification of checkpoints in human T-cell development using severe combined immunodeficiency stem cells.
- Author
-
Wiekmeijer, Anna-Sophia, Pike-Overzet, Karin, IJspeert, Hanna, Brugman, Martijn H., Wolvers-Tettero, Ingrid L.M., Lankester, Arjan C., Bredius, Robbert G.M., van Dongen, Jacques J.M., Fibbe, Willem E., Langerak, Anton W., van der Burg, Mirjam, and Staal, Frank J.T.
- Abstract
Background Severe combined immunodeficiency (SCID) represents congenital disorders characterized by a deficiency of T cells caused by arrested development in the thymus. Yet the nature of these developmental blocks has remained elusive because of the difficulty of taking thymic biopsy specimens from affected children. Objective We sought to identify the stages of arrest in human T-cell development caused by various major types of SCID. Methods We performed transplantation of SCID CD34 + bone marrow stem/progenitor cells into an optimized NSG xenograft mouse model, followed by detailed phenotypic and molecular characterization using flow cytometry, immunoglobulin and T-cell receptor spectratyping, and deep sequencing of immunoglobulin heavy chain (IGH) and T-cell receptor δ (TRD) loci. Results Arrests in T-cell development caused by mutations in IL-7 receptor α (IL7RA) and IL-2 receptor γ (IL2RG) were observed at the most immature thymocytes much earlier than expected based on gene expression profiling of human thymocyte subsets and studies with corresponding mouse mutants. T-cell receptor rearrangements were functionally required at the CD4 − CD8 − CD7 + CD5 + stage given the developmental block and extent of rearrangements in mice transplanted with Artemis-SCID cells. The xenograft model used is not informative for adenosine deaminase–SCID, whereas hypomorphic mutations lead to less severe arrests in development. Conclusion Transplanting CD34 + stem cells from patients with SCID into a xenograft mouse model provides previously unattainable insight into human T-cell development and functionally identifies the arrest in thymic development caused by several SCID mutations. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
141. Indications to Epigenetic Dysfunction in the Pathogenesis of Common Variable Immunodeficiency.
- Author
-
Rae W
- Subjects
- ATPases Associated with Diverse Cellular Activities, Animals, B-Lymphocytes cytology, Chromatin chemistry, DNA Helicases genetics, DNA Methylation, DNA-Binding Proteins, Gene Expression Profiling, Gene Expression Regulation, Histones chemistry, Humans, Immune System, Mice, Mice, Knockout, MicroRNAs genetics, Phenotype, RNA, Untranslated genetics, Common Variable Immunodeficiency diagnosis, Common Variable Immunodeficiency genetics, Epigenesis, Genetic
- Abstract
Primary immunodeficiencies (PIDs) are a group of rare genetic diseases resulting in the impairment of one or more functions of the human immune system. Common variable immunodeficiency (CVID) is one of the most prevalent PIDs, yet despite extensive genetic analysis, most patients do not have a monogenetic diagnosis. This has led to the theory that CVID must be a polygenetic condition. An alternative theory to a monogenetic or polygenetic underlying cause of CVID is that it is epigenetic phenomena that are causal in the majority of CVID patients. I will briefly discuss epigenetic regulation in B-cell biology and development, current examples of epigenetic diseases causing CVID-like primary antibody deficiencies, and how these observations may guide future investigation into the role of epigenetics in CVID.
- Published
- 2017
- Full Text
- View/download PDF
142. Regulation of Marginal Zone B-Cell Differentiation by MicroRNA-146a.
- Author
-
King JK, Ung NM, Paing MH, Contreras JR, Alberti MO, Fernando TR, Zhang K, Pellegrini M, and Rao DS
- Abstract
B-cell development in the bone marrow is followed by specification into functional subsets in the spleen, including marginal zone (MZ) B-cells. MZ B-cells are classically characterized by T-independent antigenic responses and require the elaboration of distinct gene expression programs for development. Given their role in gene regulation, it is not surprising that microRNAs are important factors in B-cell development. Recent work demonstrated that deficiency of the NFκB feedback regulator, miR-146a, led to a range of hematopoietic phenotypes, but B-cell phenotypes have not been extensively characterized. Here, we found that miR-146a-deficient mice demonstrate a reduction in MZ B-cells, likely from a developmental block. Utilizing high-throughput sequencing and comparative analysis of developmental stage-specific transcriptomes, we determined that MZ cell differentiation was impaired due to decreases in Notch2 signaling. Our studies reveal miR-146a-dependent B-cell phenotypes and highlight the complex role of miR-146a in the hematopoietic system.
- Published
- 2017
- Full Text
- View/download PDF
143. Tolerogenic immunoreceptor ILT3/LILRB4 paradoxically marks pathogenic auto-antibody-producing plasmablasts and plasma cells in non-treated SLE.
- Author
-
Inui M, Sugahara-Tobinai A, Fujii H, Itoh-Nakadai A, Fukuyama H, Kurosaki T, Ishii T, Harigae H, and Takai T
- Subjects
- Adolescent, Adult, Aged, Female, Humans, Male, Membrane Glycoproteins, Middle Aged, Receptors, Immunologic, Young Adult, Autoantibodies immunology, Immune Tolerance immunology, Lupus Erythematosus, Systemic immunology, Lupus Erythematosus, Systemic pathology, Plasma Cells immunology, Receptors, Cell Surface immunology
- Abstract
Plasmablasts and plasma cells (PBs and PCs) producing pathogenic auto-antibodies in patients with systemic autoimmune diseases could be a better target for specific therapies for the disease than general immunosuppression or pan- or activated B-cell targeting. Our previous study indicated that leukocyte immunoglobulin-like receptor (LILR) B4 (B4, also known as ILT3/LIR-5/CD85k), a tolerogenic receptor in antigen-presenting cells, is ectopically expressed on the PB/PC surface in healthy individuals. Here, we show that the enlarged population size of PBs/PCs with augmented B4 expression is characteristic in non-treated systemic lupus erythematosus (SLE). Paradoxically, the transcription frequency of the anti-double-strand DNA immunoglobulin-coding V
H sequence in the B4+ population of non-treated SLE was significantly higher than that in B4- cells. B4+ and B4- PBs/PCs were suggested to be developmentally equivalent based on the simultaneous generation of these populations upon activation of memory B cells in vitro B4 expression was found to be induced efficiently by IL-2, while IFN-α effectively induced B4+ PBs/PCs in vitro Utilizing the elevated B4 will support opening a new avenue for identifying the mechanism for generation of, and additional molecular markers for, pathogenic cells., (© The Japanese Society for Immunology. 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.)- Published
- 2016
- Full Text
- View/download PDF
144. B-Lymphopoiesis in Fetal Liver, Guided by Chemokines.
- Author
-
Kajikhina K, Tsuneto M, and Melchers F
- Subjects
- Animals, Fetal Development, Fetus, Humans, Mice, Receptors, CCR7 metabolism, B-Lymphocytes physiology, Chemokines metabolism, Liver physiology, Lymphopoiesis, Mesoderm physiology, Precursor Cells, B-Lymphoid physiology
- Abstract
Early in embryonic development of mice, from day 12.5 after conception, myeloid-lymphoid bipotent progenitors, expressing receptors both for IL7 and CSF-1, migrate from embryonic blood into developing fetal liver. These progenitors also express multiple chemokine receptors, i.e., CCR7, CXCR3, CXCR4, and CXCR5, all on one cell. Their migration through LYVE-1+ vascular endothelium is guided by CCR7, recognizing the chemokine CCL19, and by CXCR3, recognizing CXCL10/11, chemokines which are both produced by the endothelium. Once inside fetal liver, the progenitors are attracted by the chemokine CXCL12 to ALCAM+ liver mesenchyme, which produces not only this chemokine, but also the myeloid differentiation-inducing cytokine CSF-1 and the lymphoid differentiation-inducing cytokine IL7. In this mesenchymal environment B-lymphocyte lineage progenitors are then induced by IL7 to enter differentiation and Ig gene rearrangements. Within 3-4 days surface IgM+ immature B-cells develop, which are destined to enter the B1-cell compartments in the peripheral lymphoid organs., (© 2016 Elsevier Inc. All rights reserved.)
- Published
- 2016
- Full Text
- View/download PDF
145. B-cell development and functions and therapeutic options in adenosine deaminase–deficient patients.
- Author
-
Brigida, Immacolata, Sauer, Aisha V., Ferrua, Francesca, Giannelli, Stefania, Scaramuzza, Samantha, Pistoia, Valentina, Castiello, Maria Carmina, Barendregt, Barbara H., Cicalese, Maria Pia, Casiraghi, Miriam, Brombin, Chiara, Puck, Jennifer, Müller, Klaus, Notarangelo, Lucia Dora, Montin, Davide, van Montfrans, Joris M., Roncarolo, Maria Grazia, Traggiai, Elisabetta, van Dongen, Jacques J.M., and van der Burg, Mirjam
- Abstract
Background: Adenosine deaminase (ADA) deficiency causes severe cellular and humoral immune defects and dysregulation because of metabolic toxicity. Alterations in B-cell development and function have been poorly studied. Enzyme replacement therapy (ERT) and hematopoietic stem cell (HSC) gene therapy (GT) are therapeutic options for patients lacking a suitable bone marrow (BM) transplant donor. Objective: We sought to study alterations in B-cell development in ADA-deficient patients and investigate the ability of ERT and HSC-GT to restore normal B-cell differentiation and function. Methods: Flow cytometry was used to characterize B-cell development in BM and the periphery. The percentage of gene-corrected B cells was measured by using quantitative PCR. B cells were assessed for their capacity to proliferate and release IgM after stimulation. Results: Despite the severe peripheral B-cell lymphopenia, patients with ADA-deficient severe combined immunodeficiency showed a partial block in central BM development. Treatment with ERT or HSC-GT reverted most BM alterations, but ERT led to immature B-cell expansion. In the periphery transitional B cells accumulated under ERT, and the defect in maturation persisted long-term. HSC-GT led to a progressive improvement in B-cell numbers and development, along with increased levels of gene correction. The strongest selective advantage for ADA-transduced cells occurred at the transition from immature to naive cells. B-cell proliferative responses and differentiation to immunoglobulin secreting IgM after B-cell receptor and Toll-like receptor triggering were severely impaired after ERT and improved significantly after HSC-GT. Conclusions: ADA-deficient patients show specific defects in B-cell development and functions that are differently corrected after ERT and HSC-GT. [Copyright &y& Elsevier]
- Published
- 2014
- Full Text
- View/download PDF
146. Flexible ordering of antibody class switch and V(D)J joining during B-cell ontogeny.
- Author
-
Kumar, Satyendra, Wuerffel, Robert, Achour, Ikbel, Lajoie, Bryan, Sen, Ranjan, Dekker, Job, Feeney, Ann J., and Kenter, Amy L.
- Subjects
- *
B cells , *ONTOGENY - Abstract
An abstract of the article "Flexible ordering of antibody class switch and V(D)J joining during B-cell ontogeny," by Satyendra Kumar, Robert Wuerffel, Ikbel Achour, Bryan Lajoie, Ranjan Sen, Job Dekker, Ann J. Feeney, and Amy L. Kenter is presented.
- Published
- 2013
- Full Text
- View/download PDF
147. An extracatalytic function of CD45 in B cells is mediated by CD22.
- Author
-
Coughlin S, Noviski M, Mueller JL, Chuwonpad A, Raschke WC, Weiss A, and Zikherman J
- Subjects
- Alleles, Animals, Antigens metabolism, CSK Tyrosine-Protein Kinase, Calcium metabolism, Mice, Inbred C57BL, Mice, Transgenic, Models, Biological, Phenotype, RNA Splicing genetics, Receptors, Antigen, B-Cell metabolism, Signal Transduction, T-Lymphocytes metabolism, Thymocytes metabolism, Transgenes, src-Family Kinases metabolism, B-Lymphocytes metabolism, Biocatalysis, Leukocyte Common Antigens metabolism, Sialic Acid Binding Ig-like Lectin 2 metabolism
- Abstract
The receptor-like tyrosine phosphatase CD45 regulates antigen receptor signaling by dephosphorylating the C-terminal inhibitory tyrosine of the src family kinases. However, despite its abundance, the function of the large, alternatively spliced extracellular domain of CD45 has remained elusive. We used normally spliced CD45 transgenes either incorporating a phosphatase-inactivating point mutation or lacking the cytoplasmic domain to uncouple the enzymatic and noncatalytic functions of CD45 in lymphocytes. Although these transgenes did not alter T-cell signaling or development irrespective of endogenous CD45 expression, both partially rescued the phenotype of CD45-deficient B cells. We identify a noncatalytic role for CD45 in regulating tonic, but not antigen-mediated, B-cell antigen receptor (BCR) signaling through modulation of the function of the inhibitory coreceptor CD22. This finding has important implications for understanding how naïve B cells maintain tonic BCR signaling while restraining inappropriate antigen-dependent activation to preserve clonal "ignorance."
- Published
- 2015
- Full Text
- View/download PDF
148. Perspectives on fetal derived CD5+ B1 B cells.
- Author
-
Hardy RR and Hayakawa K
- Subjects
- Animals, Fetus, Humans, Leukemia, B-Cell immunology, B-Lymphocyte Subsets immunology, B-Lymphocytes immunology, CD5 Antigens immunology, Lymphopoiesis immunology, Precursor Cells, B-Lymphoid immunology
- Abstract
CD5(+) B-cell origins and their predisposition to lymphoma are long-standing issues. Transfer of fetal and adult liver BM Pro-B cells generates B cells with distinct phenotypes: fetal cells generate IgM(high) IgD(low) CD5(+) , whereas adult cells IgM(low) IgD(high) CD5(-) . This suggests a developmental switch in B lymphopoiesis, similar to the switch in erythropoiesis. Comparison of mRNA and miRNA expression in fetal and adult Pro-B cells revealed differential expression of Lin28b mRNA and Let-7 miRNA, providing evidence that this regulatory axis functions in the switch. Recent work has shown that Arid3a is a key transcription factor mediating fetal-type B-cell development. Lin28b-promoted fetal development generates CD5(+) B cells as a consequence of positively selected self-reactivity. CD5(+) B cells play important roles in clearance of apoptotic cells and in protective immune responses, but also pose a risk of progression to leukemia/lymphoma. Differential Lin28b expression in fetal and adult human B-cell precursors showed that human B-cell development may resemble mouse, with self-reactive "innate-like" B cells generated early in life. It remains to be determined whether such human B cells have a higher propensity to leukemic progression. This review describes our recent research with CD5(+) B cells and presents our perspective on their role in disease., (© 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2015
- Full Text
- View/download PDF
149. Human B-cell and progenitor stages as determined by probability state modeling of multidimensional cytometry data.
- Author
-
Bagwell CB, Hill BL, Wood BL, Wallace PK, Alrazzak M, Kelliher AS, and Preffer FI
- Subjects
- Antigens, CD19 metabolism, B-Lymphocytes immunology, Bone Marrow Cells cytology, Bone Marrow Cells immunology, Cell Differentiation immunology, Data Interpretation, Statistical, Flow Cytometry, Humans, Immunophenotyping, Models, Theoretical, Precursor Cells, B-Lymphoid immunology, Up-Regulation, Antigens, Surface metabolism, B-Lymphocytes cytology, Hematopoietic Stem Cells cytology, Precursor Cells, B-Lymphoid cytology
- Abstract
Background: Human progenitor and B-cell development is a highly regulated process characterized by the ordered differential expression of numerous cell-surface and intracytoplasmic antigens. This study investigates the underlying coordination of these modulations by examining a series of normal bone marrow samples with the method of probability state modeling or PSM., Results: The study is divided into two sections. The first section examines B-cell stages subsequent to CD19 up-regulation. The second section assesses an earlier differentiation stage before and including CD19 up-regulation. POST-CD19 ANTIGENIC UP-REGULATION: Statistical analyses of cytometry data derived from sixteen normal bone marrow specimens revealed that B cells have at least three distinct coordinated changes, forming four stages labeled as B1, B2, B3, and B4. At the end of B1; CD34 antigen expression down-regulates with TdT while CD45, CD81, and CD20 slightly up-regulate. At the end of B2, CD45 and CD20 up-regulate. At the end of B3 and beginning of B4; CD10, CD38, and CD81 down-regulate while CD22 and CD44 up-regulate. PRE-CD19 ANTIGENIC UP-REGULATION: Statistical analysis of ten normal bone marrows revealed that there are at least two measurable coordinated changes with progenitors, forming three stages labeled as P1, P2, and P3. At the end of P1, CD38 up-regulates. At the end of P2; CD19, CD10, CD81, CD22, and CD9 up-regulate while CD44 down-regulates slightly., Conclusions: These objective results yield a clearer immunophenotypic picture of the underlying cellular mechanisms that are operating in these important developmental processes. Also, unambiguously determined stages define what is meant by "normal" B-cell development and may serve as a preliminary step for the development of highly sensitive minimum residual disease detection systems. A companion article is simultaneously being published in Cytometry Part A that will explain in further detail the theory behind PSM. Three short relevant videos are available in the online supporting information for both of these papers., (© 2015 International Clinical Cytometry Society.)
- Published
- 2015
- Full Text
- View/download PDF
150. Clinical, molecular, and cellular immunologic findings in patients with SP110-associated veno-occlusive disease with immunodeficiency syndrome.
- Author
-
Cliffe, Simon T., Bloch, Donald B., Suryani, Santi, Kamsteeg, Erik-Jan, Avery, Danielle T., Palendira, Umaimainthan, Church, Joseph A., Wainstein, Brynn K., Trizzino, Antonino, Lefranc, Gérard, Akatcherian, Carlo, Megarbané, André, Gilissen, Christian, Moshous, Despina, Reichenbach, Janine, Misbah, Siraj, Salzer, Uli, Abinun, Mario, Ong, Peck Y., and Stepensky, Polina
- Subjects
AGAMMAGLOBULINEMIA ,IMMUNOLOGICAL deficiency syndromes ,NUCLEOTIDE sequence ,BONE marrow transplantation ,CD40 antigen ,CELL transformation ,ALLELES ,VEIN diseases - Abstract
Background: Mutations in the SP110 gene result in infantile onset of the autosomal recessive primary immunodeficiency disease veno-occlusive disease with immunodeficiency syndrome (VODI), which is characterized by hypogammaglobulinemia, T-cell dysfunction, and a high frequency of hepatic veno-occlusive disease. Objectives: We sought to further characterize the clinical features, B-lineage cellular immunologic findings, and molecular pathogenesis of this disorder in 9 patients with new diagnoses, including 4 novel mutations from families of Italian, Hispanic, and Arabic ethnic origin. Methods: Methods used include clinical review; Sanger DNA sequencing of the SP110 gene; determination of transfected mutant protein function by using immunofluorescent studies in Hep-2 cells; quantitation of B-cell subsets by means of flow cytometry; assessments of B-cell function after stimulation with CD40 ligand, IL-21, or both; and differential gene expression array studies of EBV-transformed B cells. Results: We confirm the major diagnostic criteria and the clinical utility of SP110 mutation testing for the diagnosis of VODI. Analysis of 4 new alleles confirms that VODI is caused by reduced functional SP110 protein levels. Detailed B-cell immunophenotyping demonstrated that Sp110 deficiency compromises the ability of human B cells to respond to T cell–dependent stimuli and differentiate into immunoglobulin-secreting cells in vitro. Expression microarray studies have identified pathways involved in B-lymphocyte differentiation and macrophage function. Conclusion: These studies show that a range of mutations in SP110 that cause decreased SP110 protein levels and impaired late B-cell differentiation cause VODI and that the condition is not restricted to the Lebanese population. [Copyright &y& Elsevier]
- Published
- 2012
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.