173 results on '"autochthonous breeds"'
Search Results
52. Analiza kriterijev ogroženosti slovenskih avtohtonih pasem domačih živali
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Pokorn, Tina and Simčič, Mojca
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živinoreja ,avtohtone pasme ,ogroženost ,breeding programs ,domestic animals ,gene bank ,risk status ,animal breeding ,domače živali ,genska banka ,autochthonous breeds ,rejski programi - Abstract
Slovenske avtohtone pasme so tiste pasme, ki so nastale na območju Republike Slovenije. Imamo 18 slovenskih avtohtonih pasem domačih živali, od katerih je 12 pasem rejnih živali, ki se jih uporablja za prehrano in kmetijstvo. Nekatere avtohtone pasme rejnih živali so ogrožene. Leta 2003 se je pričel voditi Register pasem z zootehniško oceno (2019). Do leta 2013 je Javna služba nalog genske banke v živinoreji stopnjo ogroženosti pasem rejnih živali določala v skladu s Pravilnikom o ohranjanju biotske raznovrstnosti v živinoreji (2020). Od leta 2014 dalje je v veljavi Pravilnik o spremembah Pravilnika za ohranjanje biotske raznovrstnosti v živinoreji (2014). V magistrskem delu smo analizirali predhodne in sedaj veljavne kriterije za ocenjevanje stopnje ogroženosti. Za vsako pasmo smo podatke o stopnji ogroženosti, velikosti populacije, številu plemenic in plemenjakov prikazali v grafični obliki. Podatke smo pridobili iz Registra pasem z zootehniško oceno (2019) za obdobje od leta 2003 do leta 2019. V tem obdobju se je stalež živali pri večini pasem povečal, vendar je zaradi posodobljenih kriterijev, končna stopnja ogroženosti večine pasem »kritična«. V letu 2019 je bila stopnja ogroženosti pri osmih slovenskih avtohtonih pasmah »kritična«, in sicer pri lipicanskem konju, slovenskem hladnokrvnem konju, posavskem konju, bovški ovci, belokranjski pramenki, istrski pramenki, drežniški kozi in kraškem ovčarju. Med avtohtonimi pasmami so imele tri pasme »ogroženo« stopnjo, in sicer cikasto govedo, štajerska kokoš in krškopoljski prašič. Jezersko-solčavska ovca je imela »ranljivo« stopnjo ogroženosti. Slovenian autochthonous breeds are those that originated in the territory of the Republic of Slovenia. We have 18 Slovenian autochthonous breeds of domestic animals, of which 12 are breeds of farm animals used for food and agriculture. Today some of our autochthonous breeds of farm animals are endangered. In the year 2003, the Register of breeds and zootechnical assessment (2019) was established. Until 2013, the Public service for Farm Animal Genetic Resources Conservation has estimated the level of endangerment of farm animals in accordance with the Rules on preserving biodiversity in livestock breeding (2020). Since 2014, the Rules on amendments to the Rules on preserving biodiversity in livestock breeding have been in force (2014). In the master's thesis we analyzed the previous and today valid endangerment criteria. For each breed the information for the level of endangerment, the population size, the number of female and male animals used for breeding were presented graphically. We obtained data from the Register of breeds and zootechnical assessment (2019) for the period from 2003 to 2019. During this period the populations increased in most breeds, but due to updated criteria, the final level of endangerment for most breeds is »critical«. In 2019, the level of endangerment in eight Slovenian autochthonous breeds was »critical«, namely the Lipizzan horse, the Slovenian cold blooded horse, the Posavje horse, the Bovec sheep, the Bela Krajina pramenka, the Istrian pramenka, the Drežnica goat and the Karst shepherd. Among the autochthonous breeds, three breeds had »endangered« level, namely Cika cattle, the Styrian hen and Krškopolje pig. The Jezersko-solčava sheep had »vulnerable« level of endangerment.
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- 2020
53. FAT QUALITY IN THE INDIGENOUS KRŠKOPOLJE PIG REARED IN AN ENRICHED ENVIRONMENT.
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ŽEMVA, Marjeta, NGAPO, Tania M., MALOVRH, Špela, LEVART, Alenka, and KOVAČ, Milena
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FAT content of meat ,MEAT quality ,ADIPOSE tissues ,SWINE breeding ,MEAT industry - Abstract
Copyright of Acta Agriculturae Slovenica is the property of Biotechnical Faculty of the University of Ljubljana and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
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- 2014
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54. Geography of Cika cattle breed
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Metka ŽAN LOTRIČ, Andrej ŠALEHAR, and Drago KOMPAN
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cattle ,autochthonous breeds ,Cika cattle ,geography ,origin area ,Slovenia ,Agriculture - Abstract
The geography of Slovenian autochthonous Cika cattle breed was studied over a 140-year period of its development. The first literature reference regarding the dissemination range of original Cika cattle was found in the year 1872, when Schollmayr (1873) studied cattle breeds in Carniola. In the second half of the 19 century, cattle in Carniola were without their own names of breeds and were characterized by a large phenotypic diversity. A generic term “Carniolan cattle” was the most commonly used name and animals were grouped according to their colour. Povše (1893) reported that the red coloured Gorenjska cattle were to the fullest extent spread in the area which today belongs to Gorenjska statistical region. Under the influence of specific climate and breeding conditions in Bohinj area, the smallest in size and the most dairy type of Cika cattle was developed here. They named it as “Bohinj cattle” and this was the original form of Cika cattle. Breeding of Cika cattle maintained in the same area until the sixties of the past century. In the year 1964 a symposium took place in Kranj, where it was decided that Cika cattle was going to get upgraded by Simmental breed. Today, the breeding of Cika cattle is dispersed across a larger area of the Republic of Slovenia, however, it is the most widespread in the north part of Central Slovenian statistical region (Kamnik area) and Gorenjska, especially in the south-eastern part of Julian Alps (Bohinj area). In these two areas, Cika cattle breeding is still most concentrated.
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- 2012
55. Application of multivariate principal component analysis to morphological characterization of indigenous goats in Southern Nigeria
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Moses OKPEKU, Abdulmojeed YAKUBU, Sunday Olusola PETERS, Michael Ohiokhuaobo OZOJE, Christian Obiora Ndubuisi IKEOBI, Olufunmilayo Ayoka ADEBAMBO, and Ikhide Godwin IMUMORIN
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goats ,autochthonous breeds ,body traits ,multivariate analysis ,Nigeria ,Agriculture - Abstract
Phenotypic variation present in a population arises due to genotypic and environmental effects, and the magnitude of phenotypic variability differs under different environmental conditions, therefore, the purpose of this study was to objectively describe the linear type traits of extensively managed mature indigenous goats of Southern Nigeria and to predict body weight from their orthogonal shape characters using principal component analysis. Body weight and four body measurements namely, height at withers, neck length, body length and heart girth were measured in 265 randomly selected West African Dwarf (WAD) and Red Sokoto (RS) goats of both sexes. RS goats had significantly (P < 0.05) higher morphological traits compared to their WAD counterparts. Sexual dimorphism was observed in all the traits with higher values recorded for males. Phenotypic correlations among body weight and biometric traits were positive and highly significant (r = 0.76–0.91 versus 0.82–0.97 and 0.66–0.94 versus 0.83–0.91 for WAD and RS female and male goats, respectively). In the varimax rotated principal component factor analysis, two factors were extracted for each sex of the two breeds, although with varying degrees of factor loadings. The principal component based regression models, which are preferable for selecting animals for optimal balance, accounted for 89.00 and 96.00% as well as 81.00 and 91.00% of the variation in body weight of female and male WAD and RS goats, respectively. The information obtained could be useful in designing appropriate management, selection and breeding programmes for utilization of goat genetic resources.
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- 2011
56. Carcass quality of autochthonous Cika cattle
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Mojca SIMČIČ, Marko ČEPON, and Silvester ŽGUR
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cattle ,autochthonous breeds ,Cika ,carcass quality ,Slovenia ,Agriculture - Abstract
The Cika cattle is the only Slovenian autochthonous cattle breed, counting around 1,600 animals in 2007.. The breeding goal for Cika cattle is dual purpose with the emphasis on milk production. However, Cika cattle is mostly reared in the cow-calf system. To a smaller extent Cika cattle is still used for milk production in the traditional regions for Alpine dairy-farming. Our main interest was to get an insight into carcass quality of Cika cattle. The data used in this survey were collected in slaughterhouses in the years 2005 through 2007. Out of all slaughtered cattle in 2007 the share of slaughtered Cika cattle was 0.24%. According to the category, the slaughtered animlas were very heterogenic in carcass weight which is seen in rather large standard deviations. The average carcass weight of A category (bulls under 24 months of age) was 260.3 kg. The majority of bulls under 24 months of age and calves were classified in conformation class O (57.1 and 47.8%), whereas bulls over 24 months of age were mostly classified in the conformation class R. The majority of calves (88.1%), bulls under 24 months of age (55.8%) and bulls over 24 months of age (49.5%) were classified in fatness class 2. Most of Cika cattle are reared extensively on small farms, mostly on mountain pastures without any additional concentrates. This could present the basis and the opportunity for Cika breeders to promote beef from Cika cattle on the market and to increase their income. Autochthonous Cika is well adapted to the environment and helps to maintain biodiversity and sustainable agricultural production, especially in less favourable agricultural areas.
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- 2008
57. Development of a SNP parentage assignment panel in some North-Eastern Spanish meat sheep breeds
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Calvo Lacosta, Jorge Hugo, Serrano Noreña, Magdalena, Tortereau, Flavie, Sarto Aured, Pilar, Jiménez, María A., Lahoz Crespo, Belén, Iguácel Quintana, Laura Pilar, Folch Pera, José, Alabart Álvarez, José Luis, Fabre, Stéphane, Calvo Lacosta, Jorge Hugo, Serrano Noreña, Magdalena, Tortereau, Flavie, Sarto Aured, Pilar, Jiménez, María A., Lahoz Crespo, Belén, Iguácel Quintana, Laura Pilar, Folch Pera, José, Alabart Álvarez, José Luis, and Fabre, Stéphane
- Abstract
Aim of study: To validate two existing single nucleotide polymorphism (SNP) panels for parentage assignment in sheep, and develop a cost effective genotyping system to use in some North-Eastern Spanish meat sheep populations for accurate pedigree assignment.Area of study: SpainMaterial and methods: Nine sheep breeds were sampled: Rasa Aragonesa (n=38), Navarra (n=39), Ansotana (n=41), Xisqueta (n=41), Churra Tensina (n=38), Maellana (39), Roya Bilbilitana (n=24), Ojinegra (n=36) and Cartera (n=39), and these animals were genotyped with the Illumina OvineSNP50 BeadChip array. Genotypes were extracted from the sets of 249 SNPs and 163 SNPs for parentage assignment designed in France and North America, respectively. Validation of a selected cost-effective genotyping panel of 158 SNPs from the French panel were performed by Kompetitive allele specific PCR (KASP). Additionally, some functional SNPs (n=15) were also genotyped.Main results: The set of 249 SNPs for parentage assignment showed better diversity, probability of identity, and exclusion probabilities than the set of 163 SNPs. The average minor allele frequency for the set of 249, 163 and 158 SNPs were 0.41 + 0.01, 0.39 + 0.01 and 0.42 + 0.01, respectively. The parentage assignment rate was highly dependent to the percentage of putative sires genotyped.Research highlights: The described method is a cost-effective genotyping system combining the genotyping of SNPs for the parentage assignment with some functional SNPs, which was successfully used in some Spanish meat sheep breeds.
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- 2020
58. Development of a SNP parentage assignment panel in some north-eastern spanish meat sheep breeds
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Calvo, Jorge Hugo [0000-0001-9513-0219], Serrano, Magdalena [0000-0002-1621-3102], Tortereau, Flavie [0000-0003-1444-4481], Sarto, María Pilar [0000-0003-1486-3950], Iguácel, Laura Pilar [0000-0001-6042-3134], Folch, Josep María [0000-0003-3689-1303], Alabart, José Luis [0000-0001-5015-8103], Fabre, Stéphane [0000-0001-7350-9500], Lahoz, Belén [0000-0001-9394-5027], Calvo, Jorge Hugo, Serrano, Magdalena, Tortereau, Flavie, Sarto, María Pilar, Iguácel, Laura Pilar, Jiménez, M. Angeles, Folch, Josep María, Alabart, José Luis, Fabre, Stéphane, Lahoz, Belén, Calvo, Jorge Hugo [0000-0001-9513-0219], Serrano, Magdalena [0000-0002-1621-3102], Tortereau, Flavie [0000-0003-1444-4481], Sarto, María Pilar [0000-0003-1486-3950], Iguácel, Laura Pilar [0000-0001-6042-3134], Folch, Josep María [0000-0003-3689-1303], Alabart, José Luis [0000-0001-5015-8103], Fabre, Stéphane [0000-0001-7350-9500], Lahoz, Belén [0000-0001-9394-5027], Calvo, Jorge Hugo, Serrano, Magdalena, Tortereau, Flavie, Sarto, María Pilar, Iguácel, Laura Pilar, Jiménez, M. Angeles, Folch, Josep María, Alabart, José Luis, Fabre, Stéphane, and Lahoz, Belén
- Abstract
Aim of study: To validate two existing single nucleotide polymorphism (SNP) panels for parentage assignment in sheep, and develop a cost effective genotyping system to use in some North-Eastern Spanish meat sheep populations for accurate pedigree assignment. Area of study: Spain Material and methods: Nine sheep breeds were sampled: Rasa Aragonesa (n=38), Navarra (n=39), Ansotana (n=41), Xisqueta (n=41), Churra Tensina (n=38), Maellana (39), Roya Bilbilitana (n=24), Ojinegra (n=36) and Cartera (n=39), and these animals were genotyped with the Illumina OvineSNP50 BeadChip array. Genotypes were extracted from the sets of 249 SNPs and 163 SNPs for parentage assignment designed in France and North America, respectively. Validation of a selected cost-effective genotyping panel of 158 SNPs from the French panel were performed by Kompetitive allele specific PCR (KASP). Additionally, some functional SNPs (n=15) were also genotyped. Main Results: The set of 249 SNPs for parentage assignment showed better diversity, probability of identity, and exclusion probabilities than the set of 163 SNPs. The average minor allele frequency for the set of 249, 163 and 158 SNPs were 0.41 + 0.01, 0.39 + 0.01 and 0.42 + 0.01, respectively. The parentage assignment rate was highly dependent to the percentage of putative sires genotyped. Research highlights: The described method is a cost-effective genotyping system combining the genotyping of SNPs for the parentage assignment with some functional SNPs, which was successfully used in some Spanish meat sheep breeds. Additional key words: autochthonous breeds; pedigree; genotyping; animal breeding Abbreviations used: AI (artificial insemination); EBV (estimated breeding value); ISAG (International Society for Animal Genetics); KASP (kompetitive allele specific PCR); LOD (logarithm of the odds); MAF (minor allele frequency); PE (exclusion probability); PI (probability of identity); SNP (single nucleotide polymorphism) Authors’ contributions: Conce
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- 2020
59. Detecting population structure and recent demographic history in endangered livestock breeds: the case of the Italian autochthonous donkeys.
- Author
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Colli, L., Perrotta, G., Negrini, R., Bomba, L., Bigi, D., Zambonelli, P., Verini Supplizi, A., Liotta, L., and Ajmone‐Marsan, P.
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DONKEYS , *ENDANGERED species , *LIVESTOCK breeds , *MICROSATELLITE repeats - Abstract
Since its domestication, about 5000 years ago, the donkey ( Equus asinus) has been extensively used as a work or draft animal in agricultural activities and for the transportation of people and goods. In the last century, technology improvement and growing mechanization strongly affected agriculture and the management and use of this livestock species in the industrialized countries. Nowadays, the use of donkeys for work or transport has almost disappeared, together with the need for mules or hinny breeding. During the last five decades, Italian autochthonous donkey populations suffered from a severe reduction in population size, which led to the extinction of several breeds. At present, eight breeds remain, all classified by FAO as critically endangered or endangered: Asinara, Pantesco, Grigio Siciliano, Romagnolo, Amiatino, Sardo Grigio, Martina Franca, and Ragusano. To evaluate the extant genetic variability of Italian donkeys, we typed 16 microsatellite loci in 258 individuals from these breeds. The results highlighted moderate levels of inbreeding ( FIS = 0.127) and a significant partition of genetic variation into breeds, as suggested by fixation index ( FST = 0.109) and analysis of molecular variance (10.86% of total variation assigned to the between-breeds level) analyses. This was confirmed by a Bayesian clustering procedure that also highlighted a further partitioning at lower hierarchical levels corresponding to the farms of origin. This evidence suggests that an effective management strategy for Italian donkey populations should focus on breeds as conservation units. However, this requires a synergic management strategy at the farm level to maintain diversity and avoid inbreeding. [ABSTRACT FROM AUTHOR]
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- 2013
- Full Text
- View/download PDF
60. Distribution of tissues in the carcass of Turopolje pig, an autochtonous Croatian breed
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Marija ĐIKIĆ, Krešimir SALAJPAL, Danijel KAROLYI, Ivan JURIĆ, and Vlatko RUPIĆ
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pigs ,autochthonous breeds ,Turopolje pig ,carcass ,muscles ,fat ,Agriculture - Abstract
Carcass composition and distribution of tissues in the carcass of Turopolje pig were established by analysing the share of muscle (M), fat (F) and bone (B) tissue in the carcass and each of this tissues from parts leg, shoulder, loin, neck and belly-rib part (BRP) in the carcass as well as the same tissue in the parts. Investigation was caried out in two groups of fattened pigs at different age and live weight at slaughtering (TI n = 10, age 584 ± 20 days and 81.9 kg ± 6.1 kg; TII n = 9, age 679 ± 20 days and 100.3 kg ± 4.9 kg). Pigs were fattened in the outdoor system of flood forests and marsh meadows biocenosis (Quercus robur and Deschampsietum caespitosae) according to traditional Croatian technology of low input feed (0.5 kg/day/animal). On the slaughter line the animals and carcasses were separetly weighted and cut according to Weniger method and by total dissection. In the groups TI and TII the percentages of muscle (38.2% and 40.5%, respectively) and bone tissue (10.6% and 9.7%, respectively) were significantly different in the carcass, while the share of fat (34.2% and 33.8%, respectively) was not significantly different. In the groups TI and TII the distribution of muscle, fat and bone tissue in the body parts leg, shoulder, loin, neck and belly-rib part (BRP) were estimated.
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- 2004
61. Whole-genome sequencing of European autochthonous and commercial pig breeds allows the detection of signatures of selection for adaptation of genetic resources to different breeding and production systems
- Author
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Valerio Joe Utzeri, Ana Isabel Fernández, G. Usai, Marjeta Čandek-Potokar, María Muñoz, José Pedro Araújo, Maurizio Gallo, Riccardo Bozzi, Čedomir Radović, Fabián García, Giuseppina Schiavo, Federica Di Palma, Cristina Óvilo, Marie J. Mercat, Juan García-Casco, Christoph Zimmer, Anisa Ribani, Juliette Riquet, Danijel Karolyi, Vladimir Margeta, Samuele Bovo, Luca Fontanesi, Giulia Moscatelli, Radomir Savić, Violeta Razmaite, Estefania Alves, Rui Charneca, J.M. Martins, Raquel Quintanilla, Yolanda Núñez, Graham J Etherington, University of Bologna/Università di Bologna, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria = National Institute for Agricultural and Food Research and Technology (INIA), Instituto Politécnico de Viana do Castelo = Polytechnic Institute of Viana do Castelo (IPVC), Università degli Studi di Firenze = University of Florence (UniFI), Kmetijski Institut Slovenije, Partenaires INRAE, Universidade de Évora, Earlham Institute [Norwich], University of Zagreb, Associazione Nazionale Allevatori Suini, Josip Juraj Strossmayer University of Osijek, Institut du Porc (IFIP), Institut de Recerca i Tecnologia Agroalimentàries = Institute of Agrifood Research and Technology (IRTA), Institute for Animal Husbandry, Lithuanian University of Health Sciences [Kaunas, Lithuania], Génétique Physiologie et Systèmes d'Elevage (GenPhySE ), Ecole Nationale Vétérinaire de Toulouse (ENVT), Institut National Polytechnique (Toulouse) (Toulouse INP), Université de Toulouse (UT)-Université de Toulouse (UT)-Institut National Polytechnique (Toulouse) (Toulouse INP), Université de Toulouse (UT)-Université de Toulouse (UT)-École nationale supérieure agronomique de Toulouse (ENSAT), Université de Toulouse (UT)-Université de Toulouse (UT)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), University of Belgrade [Belgrade], AGRIS sardegna, Bäuerliche Erzeugergemeinschaft Schwäbisch Hall (BESH), Europe-FAANG COST Action, University of Bologna RFO 2016–2019 programme, European Project: 634476,H2020,H2020-SFS-2014-2,TREASURE(2015), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Institut National Polytechnique (Toulouse) (Toulouse INP), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-École nationale supérieure agronomique de Toulouse [ENSAT]-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Producció Animal, Genètica i Millora Animal, University of Bologna, Instituto Politécnico de Viana do Castelo, Università degli Studi di Firenze = University of Florence [Firenze] (UNIFI), Institute of Agrifood Research and Technology (IRTA), Bovo S., Ribani A., Munoz M., Alves E., Araujo J.P., Bozzi R., Candek-Potokar M., Charneca R., Di Palma F., Etherington G., Fernandez A.I., Garcia F., Garcia-Casco J., Karolyi D., Gallo M., Margeta V., Martins J.M., Mercat M.J., Moscatelli G., Nunez Y., Quintanilla R., Radovic C., Razmaite V., Riquet J., Savic R., Schiavo G., Usai G., Utzeri V.J., Zimmer C., Ovilo C., and Fontanesi L.
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Male ,Genotyping Techniques ,Swine ,Acclimatization ,[SDV]Life Sciences [q-bio] ,Breeding ,Fixation index ,Domestication ,Chromosome regions ,local pig breeds ,WGS ,genome variability ,ComputingMilieux_MISCELLANEOUS ,lcsh:SF1-1100 ,2. Zero hunger ,0303 health sciences ,Genome ,biology ,Genomics ,04 agricultural and veterinary sciences ,General Medicine ,Adaptation, Physiological ,Alentejana ,Algorithm ,Europe ,Phenotype ,Pigs ,Female ,Algorithms ,SNPs ,Research Article ,lcsh:QH426-470 ,Genotype ,Whole-genome sequencing ,pig ,autochthonous breeds ,selection ,adaptation ,Polymorphism, Single Nucleotide ,Crossbreed ,03 medical and health sciences ,Genetics ,Animals ,Selection, Genetic ,Ecology, Evolution, Behavior and Systematics ,030304 developmental biology ,Whole genome sequencing ,Genetic diversity ,Models, Genetic ,Whole Genome Sequencing ,Animal ,Directional selection ,0402 animal and dairy science ,biology.organism_classification ,040201 dairy & animal science ,Bísaro pig ,Alentejano pig ,European local breeds ,lcsh:Genetics ,Evolutionary biology ,Genomic ,Animal Science and Zoology ,lcsh:Animal culture ,Genotyping Technique - Abstract
Background Natural and artificial directional selection in cosmopolitan and autochthonous pig breeds and wild boars have shaped their genomes and resulted in a reservoir of animal genetic diversity. Signatures of selection are the result of these selection events that have contributed to the adaptation of breeds to different environments and production systems. In this study, we analysed the genome variability of 19 European autochthonous pig breeds (Alentejana, Bísara, Majorcan Black, Basque, Gascon, Apulo-Calabrese, Casertana, Cinta Senese, Mora Romagnola, Nero Siciliano, Sarda, Krškopolje pig, Black Slavonian, Turopolje, Moravka, Swallow-Bellied Mangalitsa, Schwäbisch-Hällisches Schwein, Lithuanian indigenous wattle and Lithuanian White old type) from nine countries, three European commercial breeds (Italian Large White, Italian Landrace and Italian Duroc), and European wild boars, by mining whole-genome sequencing data obtained by using a DNA-pool sequencing approach. Signatures of selection were identified by using a single-breed approach with two statistics [within-breed pooled heterozygosity (HP) and fixation index (FST)] and group-based FST approaches, which compare groups of breeds defined according to external traits and use/specialization/type. Results We detected more than 22 million single nucleotide polymorphisms (SNPs) across the 23 compared populations and identified 359 chromosome regions showing signatures of selection. These regions harbour genes that are already known or new genes that are under selection and relevant for the domestication process in this species, and that affect several morphological and physiological traits (e.g. coat colours and patterns, body size, number of vertebrae and teats, ear size and conformation, reproductive traits, growth and fat deposition traits). Wild boar related signatures of selection were detected across all the genome of several autochthonous breeds, which suggests that crossbreeding (accidental or deliberate) occurred with wild boars. Conclusions Our findings provide a catalogue of genetic variants of many European pig populations and identify genome regions that can explain, at least in part, the phenotypic diversity of these genetic resources.
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- 2020
- Full Text
- View/download PDF
62. Development of a SNP parentage assignment panel in some North-Eastern Spanish meat sheep breeds
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María A. Jiménez, Magdalena Serrano, Stéphane Fabre, Laura Pilar Iguácel, B. Lahoz, Pilar Sarto, Jorge H. Calvo, J. Folch, Flavie Tortereau, J.L. Alabart, FEDER within the POCTEFA framework(PIRINNOVI EFA103/15), Platea I + D- Aragón Government (FITE 2017), and Research Group Funds of Aragón Government (A14_17R)
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Single-nucleotide polymorphism ,Biology ,genómica ,lcsh:Agriculture ,03 medical and health sciences ,Genotype ,SNP ,Genotyping ,030304 developmental biology ,Genetics ,0303 health sciences ,lcsh:S ,0402 animal and dairy science ,pedigree ,Functional snps ,animal breeding ,04 agricultural and veterinary sciences ,040201 dairy & animal science ,Agriculture ,Livestock ,Animal breeding, genetics and reproduction ,Minor allele frequency ,genotyping ,autochthonous breeds ,Ascendencia ,Variants of PCR ,Agronomy and Crop Science ,Razas indígenas - Abstract
Aim of study: To validate two existing single nucleotide polymorphism (SNP) panels for parentage assignment in sheep, and develop a cost effective genotyping system to use in some North-Eastern Spanish meat sheep populations for accurate pedigree assignment.Area of study: SpainMaterial and methods: Nine sheep breeds were sampled: Rasa Aragonesa (n=38), Navarra (n=39), Ansotana (n=41), Xisqueta (n=41), Churra Tensina (n=38), Maellana (39), Roya Bilbilitana (n=24), Ojinegra (n=36) and Cartera (n=39), and these animals were genotyped with the Illumina OvineSNP50 BeadChip array. Genotypes were extracted from the sets of 249 SNPs and 163 SNPs for parentage assignment designed in France and North America, respectively. Validation of a selected cost-effective genotyping panel of 158 SNPs from the French panel were performed by Kompetitive allele specific PCR (KASP). Additionally, some functional SNPs (n=15) were also genotyped.Main results: The set of 249 SNPs for parentage assignment showed better diversity, probability of identity, and exclusion probabilities than the set of 163 SNPs. The average minor allele frequency for the set of 249, 163 and 158 SNPs were 0.41 + 0.01, 0.39 + 0.01 and 0.42 + 0.01, respectively. The parentage assignment rate was highly dependent to the percentage of putative sires genotyped.Research highlights: The described method is a cost-effective genotyping system combining the genotyping of SNPs for the parentage assignment with some functional SNPs, which was successfully used in some Spanish meat sheep breeds.
- Published
- 2020
63. Implementation of Breeding Methods in Horse Selection
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Babić, Anamarija, Baban, Mirjana, Gregić, Maja, and Bobić, Tina
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breeding programs ,foreign breeds ,autochthonous breeds ,breeding methods - Abstract
Pod pojmom uzgojne metode podrazumijeva se unaprijed određeno i smišljeno parenje kobile i pastuha, unutar ili između pasmina. Parenje ovisi o uzgojnome cilju, a uzgojni cilj ovisi o pasmini. Razlikuje se uzgoj u čistoj pasmini i križanje. U prošlosti su križanjem nastale većine sadašnjih pasmina, dok se konji danas najviše uzgajaju u čistoj pasmini. Za sve pasmine provode se uzgojni programi u kojima je navedeno njihovo porijeklo, način provedbe uzgojnih metoda i testiranja radne sposobnosti, postavljeni su uzgojni ciljevi i sve ostalo što je neophodno u selekciji konja. Cilj ovoga rada je upoznati se s uzgojnim metodama i programima, na koji se način provode te kako se koriste u selekciji konja. Poseban naglasak je stavljen na izvorne i zaštićene pasmine, hrvatske uzgojne tipove te strane pasmine uzgajane u Republici Hrvatskoj. Uzgojni programi se provode za autohtone pasmine (hrvatski posavac, hrvatski hladnokrvnjak i međimurski konj), zaštićenu pasminu (lipicanac), hrvatske uzgojne tipove (hrvatski sportski konj i hrvatski toplokrvnjak) te strane pasmine konja koje se uzgajaju u Republici Hrvatskoj., Breeding methods are deliberated and specified beforehand for mare and stallion mating, in or out of their breed. Mating depends on breeding goals, where breeding goals depend on the breed itself. Therefore, breeding methods differ between breeding inside of pure bloodline and crossed breeding. In the past crossed breeding has resulted in most of the horse breeds today, but currently horses are mainly breeded in pure bloodline. Every horse breed has it's own breeding program that is carried through their breeding and it contains a horse's origin, guides for breeding methods and test of their work ability, breeding goals and everything else necessary in horse selection. The goal of this work is to clarify what breeding methods and programs are, how they are carried out and how they are used in horse selection. The main focus is on the protected croatian breed, croatian horses and breeding types, along with foreign breeds that are found in the Republic of Croatia. Breeding programs are carried out for autochthonous breeds (Croatian Posavina Horse, Croatian Coldblood and Medjimurje horse), protected original breed (Lipizzan), Croatian breeding types (Croatian Sports Horse and Croatian Warmblood) and foreign breeds that are breeded in the Republic of Croatia.
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- 2019
64. Mangalitsa (Swallow-Belly Mangalitsa) Pig
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Milica Petrović, Dragan Radojković, Čedomir Radović, Marija Gogić, Miloš Lukić, Nina Batorek-Lukač, and Radomir Savić
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traditional European breed ,phenotype ,InformationSystems_INFORMATIONSTORAGEANDRETRIEVAL ,0402 animal and dairy science ,04 agricultural and veterinary sciences ,Anatomy ,Biology ,productive traits ,040401 food science ,040201 dairy & animal science ,0404 agricultural biotechnology ,TREASURE ,Data_FILES ,autochthonous breeds ,Serbia ,GeneralLiterature_REFERENCE(e.g.,dictionaries,encyclopedias,glossaries) - Abstract
Autochthonous pig breed is adapted to the specific local environment, fed with various locally available feedstuffs and well adapted to extensive conditions of housing. Their genes represent safety in the production of food in future times, in which the greater importance will be attributed to the resistance and adaptability of the breed. In terms of scientific substantiation, their performances and products are, as in the case of Mangalitsa pig, practically untapped. Thus, the aim of the present chapter is to present history and current status of Mangalitsa pig breed, its exterior phenotypic characteristics, geographical distribution, production management and main products from this Serbian autochthonous breed of pigs, one of the local pig breeds investigated in the project TREASURE. Moreover, a collection and review of available literature data, available until August 2017, on reproductive and productive traits of Mangalitsa pig breed were carried out. Mangalitsa is a late and extremely fatty pig breed with low fertility, long suckling period and a very weak-slow growth. Although studies on Mangalitsa pig are scarce, the current review gives the first insight into this local pig breed.
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- 2019
65. Production properties of the Black Slavonian pig breed
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Marija UREMOVIĆ, Zvonimir UREMOVIĆ, and Zoran LUKOVIĆ
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pigs ,autochthonous breeds ,Black Slavonian breed ,production properties ,litter size ,daily gain ,Agriculture - Abstract
The paper discusses the situation in the endangered autochthonous Black Slavonian Breed, developed in Croatia. A program for preserving this breed was initiated in 1996, which allowed the size of effective population (Ne) to grow from 18.46 to 32.32. Production properties of the Black Slavonian Breed are presented, i.e. litter size and fattening properties. According to the obtained results, production properties of this breed are rather limited. The number of liveborn and reared pigs per litter is 6.89 and 5.76 respectively. Under extensive conditions of fattening, daily gain in body mass starting at 27.20 and reaching 106.05 kg was 478 g, meat percentage being 42.95%.
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- 2000
66. Lamb Meat Quality and Carcass Evaluation of Five Autochthonous Sheep Breeds: Towards Biodiversity Protection.
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Ciliberti, Maria Giovanna, Santillo, Antonella, Marino, Rosaria, Ciani, Elena, Caroprese, Mariangela, Rillo, Luigina, Matassino, Donato, Sevi, Agostino, and Albenzio, Marzia
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MEAT quality ,SHEEP breeds ,SHEEP breeding ,OMEGA-6 fatty acids ,LAMB (Meat) ,CONJUGATED linoleic acid ,LINOLEIC acid ,FATTY acids - Abstract
Simple Summary: The biodiversity protection represents a challenge of the agenda ONU 2030 for Sustainable Development Goals (SDG). Autochthonous sheep breeds, including Altamurana, Bagnolese, Gentile di Puglia, Laticauda and Leccese, reared in continental Southern Italy, are strongly affected by extinction risk; thus, it is urgent to find new solutions to valorise their products and obtain sustainable and smart food from local farms. The objective of the present study was to assess the lamb carcass commercial quality, chemical and fatty acid composition of Altamurana, Bagnolese, Gentile di Puglia, Laticauda and Leccese autochtonous sheep breeds. Data on EU Mediterranean classification showed that the carcasses from both Bagnolese and Laticauda breeds were classified in the heaviest category C. Moreover, breed can influence the meat fatty acids profile, which is resulted rich in conjugated linoleic acid with good nutritional properties; thus, lambs' meat from autochthonous sheep breeds can be considered interesting for human consumption. The present study can help to protect the biodiversity of livestock heritage of Southern Italy and open a new field for the valorisation and promotion of their derived products. In the present study, the evaluation of the carcasses and meat quality, in terms of chemical composition and fatty acid profile, of lambs from five autochthonous sheep breeds (Altamurana, Bagnolese, Gentile di Puglia, Laticauda, and Leccese) reared in continental Southern Italy, were studied. All the carcasses were evaluated according to the EU Mediterranean classification system for carcasses weighing less than 13 kg. Meat chemical composition and fatty acids profile were assessed on both loin and leg commercial cuts. Fatty acid composition of loin resulted in differences among breeds, displaying lower values of saturated fatty acid in Altamurana, Bagnolese, and Leccese breeds and the highest content of polyunsaturated fatty acid in the Altamurana breed. Principal component analysis grouped lamb according to fatty acid content and to conjugated linoleic acid (CLA), omega n-3 and n-6 fatty acids; thus, Altamurana, Bagnolese, and Leccese breeds are characterized by the highest values of CLA content. Our data demonstrated that lamb meat from autochthonous breed has good carcass quality and the content of CLA, n-3, and n-6 was valuable for human consumption; therefore, the valorisation of local meat quality can help to avoid the extinction of the autochthonous breed offering to the market and consumer's high nutritive products. [ABSTRACT FROM AUTHOR]
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- 2021
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67. Study of Behavioural Traits in Can de Palleiro (Galician Shepherd Dog).
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Muñiz de Miguel, Susana, Diéguez, Francisco Javier, da Silva-Monteiro, Joao Pedro, Ferreiro-Mazón, Beatriz Parra, and González-Martínez, Ángela
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ENDANGERED species ,ANIMAL behavior ,ANIMAL breeding ,BEHAVIORAL research ,DOG breeds - Abstract
Simple Summary: The Can de Palleiro or Galician shepherd is a canine breed that was in danger of extinction but is currently growing rapidly in popularity. In this study, different behavioural traits of the breed were evaluated in order to assess breeds, select the best breeding animals and identify behaviour problems. This is the first study carried out in the Can de Palleiro breed using different scientifically validated tests. Questionnaires filled by the owners (C_BARQ) were collected, and a behavioural test (SAB) was conducted to evaluate the response of the dogs to a specific stimulus at a certain time and in a certain environment. In addition, the results from the Can de Palleiro breed were compared with those obtained from the general canine population of Galicia. Thereby, the Can de Palleiro breed showed less owner-directed aggression, dog-directed fear, excitability, non-social fear and separation-related problems and better trainability. The Can de Palleiro (CP) is an autochthonous canine breed from Galicia (NW Spain). Interestingly, no previous research has been published about the behaviour of this breed. Thus, the aim of the present study was to obtain a deeper understanding of CP behavioural and temperamental traits and detect any potentially problematic behaviour by using the Canine Behavioural Assessment and Research Questionnaire (C-BARQ) and the Socially Acceptable Behaviour (SAB) test. Behavioural information was obtained from 377 dogs—177 CPs and 200 general population (GP) dogs—using the C-BARQ. Additionally, 32 dogs were enrolled to perform the SAB test (19 CPs and 13 GP dogs) in order to directly evaluate their temperament. Our results indicated that CP dogs had a lower tendency to show aggressiveness towards their owners (0.18 times lower, p = 0.033) and less fear of other dogs (by 0.43 times, p = 0.001), as well as higher trainability levels (2.56 times higher, p < 0.001) when compared to GP dogs. CP dogs also had increased odds of showing chasing behaviour (3.81 times higher, p < 0.001). Conversely, CPs had reduced odds of non-social fear, separation-related problems and excitability (by 0.42, 0.35 and 0.48 times, respectively; p < 0.001, p < 0.001 and p = 0.002). The current research represents a starting point for the study of the behaviour of CPs, which appear to be a working breed, with guarding and, especially, herding characteristics. [ABSTRACT FROM AUTHOR]
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- 2021
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68. Agro biodiversity and livestock farming: autochthonous species and breeds in Serbia
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Radović, Čedomir, Gogić, Marija, Radojković, Dragan, Živković, Vladimir, Parunović, Nenad, Stanojković, Aleksandar, Savić, Radomir, Radović, Čedomir, Gogić, Marija, Radojković, Dragan, Živković, Vladimir, Parunović, Nenad, Stanojković, Aleksandar, and Savić, Radomir
- Abstract
Agro biodiversity or genetic resources for agriculture and food is one of the most significant component of total biodiversity, and it encompasses various animals, plants and micro-organisms that are necessary to maintain the key functions of agro-ecosystems. According to the United Nations, the world population has reached as much as 7.3 billion to date, with a forecast of 9.7 billion in 2050 and 11 billion by the end of the century. Well-adapted and well-developed livestock farming is an essential element of the agricultural production system, especially important in difficult conditions when crop production in the agroecosystem cannot sustain and increase its productivity and adapt to changing circumstances, and is crucial for the food security of the population. Preservation and improvement of livestock farming, animal genetic diversity, preservation of autochthonous and development of new breeds, preservation of genetically diverse populations provide society with a greater range of options to meet the future challenges in the development of agriculture. This paper gives review of the condition of farm animals and autochthonous breeds: Podolian bovine, Busha, domestic buffalo, domestic-mountain horse, Nonius, Balkan donkey, Mangalitsa, Moravka, and Resavka pig, Pirot sheep, Bardoka, Krivovir sheep, Karakachan sheep, Lipska sheep, Vlaška-Vitoroga sheep, Čokan Tsigai goat, Balkan goat, Svrljig hen, Banat Naked Neck hen and Sombor Kaporka hen. Genetic resources in animal husbandry represent all species, breeds and strains of farm animals and they have economic, scientific and cultural significance for our country.
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- 2019
69. Mangalitsa (Swallow-Belly Mangalitsa) Pig
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Radović, Čedomir, Savić, Radomir, Petrović, Milica, Gogić, Marija, Lukić, Miloš, Radojković, Dragan, Batorek-Lukač, Nina, Radović, Čedomir, Savić, Radomir, Petrović, Milica, Gogić, Marija, Lukić, Miloš, Radojković, Dragan, and Batorek-Lukač, Nina
- Abstract
Autochthonous pig breed is adapted to the specific local environment, fed with various locally available feedstuffs and well adapted to extensive conditions of housing. Their genes represent safety in the production of food in future times, in which the greater importance will be attributed to the resistance and adaptability of the breed. In terms of scientific substantiation, their performances and products are, as in the case of Mangalitsa pig, practically untapped. Thus, the aim of the present chapter is to present history and current status of Mangalitsa pig breed, its exterior phenotypic characteristics, geographical distribution, production management and main products from this Serbian autochthonous breed of pigs, one of the local pig breeds investigated in the project TREASURE. Moreover, a collection and review of available literature data, available until August 2017, on reproductive and productive traits of Mangalitsa pig breed were carried out. Mangalitsa is a late and extremely fatty pig breed with low fertility, long suckling period and a very weak-slow growth. Although studies on Mangalitsa pig are scarce, the current review gives the first insight into this local pig breed.
- Published
- 2019
70. Genetic Diversity and Identification of Homozygosity-Rich Genomic Regions in Seven Italian Heritage Turkey (Meleagris gallopavo) Breeds.
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Bernini, Francesca, Bagnato, Alessandro, Marelli, Stefano Paolo, Zaniboni, Luisa, Cerolini, Silvia, and Strillacci, Maria Giuseppina
- Subjects
- *
GENETIC variation , *WILD turkey , *HOMOZYGOSITY , *TURKEYS , *PRINCIPAL components analysis , *SINGLE nucleotide polymorphisms - Abstract
Italian autochthonous turkey breeds are an important reservoir of genetic biodiversity that should be maintained with an in vivo approach. The aim of this study, part of the TuBAvI national project on biodiversity, was to use run of homozygosity (ROH), together with others statistical approaches (e.g., Wright's F-statistics, principal component analysis, ADMIXTURE analysis), to investigate the genomic diversity in several heritage turkey breeds. We performed a genome-wide characterization of ROH-rich regions in seven autochthonous turkey breeds, i.e., Brianzolo (Brzl), Bronzato Comune Italiano (BrCI), Bronzato dei Colli Euganei (CoEu), Parma e Piacenza (PrPc), Nero d'Italia (NeIt), Ermellinato di Rovigo (ErRo) and Romagnolo (Roma). ROHs were detected based on a 650K SNP genotyping. ROH_islands were identified as homozygous ROH regions shared by at least 75% of birds (within breed). Annotation of genes was performed with DAVID. The admixture analyses revealed that six breeds are unique populations while the Roma breed consists in an admixture of founder populations. Effective population size estimated on genomic data shows a numeric contraction. ROH_islands harbour genes that may be interesting for target selection in commercial populations also. Among them the PTGS2 and PLA2G4A genes on chr10 were related to reproduction efficiency. This is the first study mapping genetic variation in autochthonous turkey populations. Breeds were genetically different among them, with the Roma breed proving to be a mixture of the other breeds. The ROH_islands identified harboured genes peculiar to the selection that occurred in heritage breeds. Finally, this study releases previously undisclosed information on existing genetic variation in the turkey species. [ABSTRACT FROM AUTHOR]
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- 2021
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- View/download PDF
71. Tracing autochthonous pig breeds with meat near- infrared spectra data pig
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Parrini, Silvia, Dadousis, Christos, Karolyi, Danijel, Martins, José Manuel, Garcia-Gasco, Juan Maria, Panella-Riera, Nuria, Nieto, Rosa, Petig, Matthias, Razmaite, Violeta, Djurkin Kušec, Ivona, Araujo, José Pedro, Čandek- Potokar, Marjeta, Lebret, Bénédicte, Cipolat- Gotet, Claudio, Bozzi, Riccardo, and Bozzi, Riccardo
- Subjects
Pigs ,autochthonous breeds ,NIRS ,meat tracking - Abstract
Near Infrared spectroscopy (NIRS) offers an easy to use and cost-effective tool for quantitative and qualitative application in animal science. Of special interest could be considered the use of NIRS for tracing meat origin on the basis of breed specification. The aim of this study was to investigate the potential use of meat NIRS as a “fingerprint” of autochthonous pig breeds. The research considered intact and grounded sample of Longissimus Dorsi (n=371) collected from 11 European local pig breeds from the TREASURE project, namely: Alentejana (ALE), Bisara (BIS), Crna Slawonska (CRN), Gascon (GAS), Iberian (IBE), Krskopolje (KRS), Lithuanian Wattle (LIA), Lithuanian White (LIH), Negre Mallorqui (NEG), Schwabish Hallisches (SCH) and Turopolje (TUR). For each muscle sample, two aliquots were scanned using FT-NIRS Antaris II model (Thermo Fisher Scientific) in absorbance mode considering the infrared region (3999 to 9999 cm-1) and averaged. Discriminant analysis of principal components (DAPC) on meat NIRS was used to assess: i) breed traceability and ii) similarity among breeds. DAPC was applied on standardised (centred and scaled) spectra using the R package. For breed traceability, cross- validation was applied: five samples per breed were sampled at random, without replacement, and used in validation. The procedure was repeated ten times and each breed was analysed separately. In this case, all breeds were present in the training set. Similarity among breeds was assessed by excluding each breed from the training set and assigning the samples in the validation set to the breeds in the training one. Overall correct classification was 68.0 and 77.6% for intact and grounded meat, respectively. Alentejana had 100% correct classification for both intact and grounded meat. For CRN, KRS, LIA, LIH and NEG use of grounded meat spectra resulted in higher classification rates from 44 to 64% for intact and from 66 to 90% for grounded meat), while for GAS the opposite was found (80% for intact vs. 70% for grounded). For the rest of the breeds slight or no differences were observed between intact and grounded samples and classification rates ranged between 66 (CRN and SCH) to 72% (BIS). The lowest classification rates were observed in both cases for CRN. Similarity among breeds was greatly varied upon dataset used (e.g. ALE samples were classified as IBE (40%), TUR (40%) and SCH (10%) using intact meat while 100% were classified as CRN using grounded meat). Our results mark NIRS as a promising tool for traceability of pig breed meat origin and support the use of grounded over intact samples.
- Published
- 2019
72. Exterior measurements of Dalmatian bušak horse type population
- Author
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Listeš, Ema, Listeš Eddy, Barbić, Ljubo, Maurić, Maja, Brkljača Bottegaro, Nika, Zdolec, Nevijo, and Vrbanac, Zoran
- Subjects
Dalmatian bušak ,autochthonous breeds ,biodiversity ,measurements - Abstract
In today’s modern world, a lot of effort is put into the conservation of local autochthonous breeds in order to preserve global biodiversity and a larger genetic pool. One of Croatian autochthonous breeds, classified as extinct or unknown, is the Dalmatian Bušak horse. As in Dalmatia there still is a small population of horses that according to their physical characteristics correspond to those of the Dalmatian Bušak, the object of our study was to take their basic body measurements in order to characterise the population, and compare them with those of other Croatian autochthonous breeds (Croatian Coldblood, Croatian Posavina horse and Međimurje horse). Nine measurements were taken from 15 horses by using a Lydtin stick (height at withers, height at croup and chest depth), ribbon (chest and cannon bone circumference) and calliper (shoulder width, croup width and croup length). The Dalmatian Bušak was lower at both withers (129.73 ± 4.78 cm) and croup (130.69 ± 4.75 cm) than other Croatian autochthonous breeds. It also had a shorter body (132.68 ± 5.38 cm) and croup length (43.73 ± 2 cm), narrower shoulder (28.39 ± 2.41 cm) and croup width (40.69 ± 3.01 cm), shallower chest depth (60.31 ± 3.77 cm) and thinner chest (159 ± 11.25 cm) and cannon bone circumference (17.08 ± 1.12 cm). Measurements are given as arithmetic mean and standard deviation. In conclusion, in this preliminary study we found that horses of the Dalmatian Bušak type are a relatively homogeneous population, as well as that they are smaller and differ quite from other Croatian autochthonous breeds. In addition, the Dalmatian Bušak should also be compared to the to the Bosnian Mountain horse, as they are similar in type and have a neighbouring geographic distribution.
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- 2019
73. Environmental impacts of pig production systems using European local breeds. The contribution of carbon sequestration and emissions from grazing
- Author
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Marjeta Čandek-Potokar, Valerio Joe Utzeri, Florence Garcia-Launay, Urška Tomažin, Alessandra Nardina Tricia Rigo Monteiro, Nina Batorek Lukač, Luca Fontanesi, Aurélie Wilfart, Leonardo Nanni Costa, Physiologie, Environnement et Génétique pour l'Animal et les Systèmes d'Elevage [Rennes] (PEGASE), Institut National de la Recherche Agronomique (INRA)-AGROCAMPUS OUEST, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Sol Agro et hydrosystème Spatialisation (SAS), Department of Agricultural and Food Sciences, University of Bologna, Animal Science Department, University of Tabriz [Tabriz], European Project: 634476,H2020,H2020-SFS-2014-2,TREASURE(2015), AGROCAMPUS OUEST-Institut National de la Recherche Agronomique (INRA), Monteiro A.N.T.R., Wilfart A., Utzeri V.J., Batorek Lukac N., Tomazin U., Nanni Costa L., Candek-Potokar M., Fontanesi L., Garcia-Launay F., and University of Bologna/Università di Bologna
- Subjects
pig ,race porcine locale ,[SDV.SA]Life Sciences [q-bio]/Agricultural sciences ,pâturage ,020209 energy ,Strategy and Management ,élevage extensif ,enquête ,02 engineering and technology ,Carbon sequestration ,environmental impact ,Industrial and Manufacturing Engineering ,extensive husbandry ,Hotspot ,life cycle assessment ,Environmental protection ,Grazing ,0202 electrical engineering, electronic engineering, information engineering ,Environmental impact assessment ,grazing ,survey ,0505 law ,General Environmental Science ,analyse du cycle de vie ,2. Zero hunger ,Renewable Energy, Sustainability and the Environment ,Autochthonous breed ,05 social sciences ,Global warming ,production porcine ,swine ,15. Life on land ,émission ,Breed ,séquestration du carbone ,Climate change mitigation ,13. Climate action ,050501 criminology ,Environmental science ,impact environnemental ,Rangeland ,Eutrophication ,autochthonous breeds ,porc - Abstract
Environmental assessment of pig production systems using local breeds remains poorly documented in the literature. So far, studies did not account for specificities of outdoor rearing which is quite common in such systems. The present study aimed at evaluating the environmental impacts of pig production systems using local breeds in Europe, while accounting for emissions associated to consumption of grass and mitigation of impacts through soil-C sequestration. Environmental impacts were estimated for 48 farms using local pig breeds: 25 in France (Gascon breed), eight in Italy (Mora Romagnola breed) and 15 in Slovenia (Krskopolje breed). Assessment was performed with and without accounting for pasture-intake emissions and potential soil-C sequestration. The data were obtained from on-farm surveys. Systems with Gascon pigs had the lowest impacts per kg of live weight for global warming and cumulative energy demand, due to lower impacts of feeds. Acidification potential was higher for Krskopolje pigs due to high dietary crude protein content and high AP of feeds, while eutrophication potential was higher for Gascon pigs due to higher phosphorus content of feeds (28% higher than the mean of the other farms). When impacts were expressed per ha of land use, pig production in Gascon farms had the lowest impacts due to more available area per pig, except for eutrophication. Low contribution of soil-C sequestration to climate change mitigation was observed (4.7% on average). However, it may have a substantial contribution for the most extensive pig systems using large land surfaces. Emissions resulting from grazing had a rather low contribution to Global Warming Potential (4%) and Eutrophication (3%), but a substantial one to Acidification impact (9% on average). In the frame of our study, the contribution of emissions related to grazing is moderate because commercial feed supply for outdoor pigs was higher than in extensive systems studied in literature. This study highlighted that main hotspots include feed composition and supply and the origin of feed ingredients. It also suggests that future assessments of extensive pig systems relying on pig foraging on grasslands or rangelands should account for soil-C sequestration and emissions associated to grazing and foraging.
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- 2019
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74. Conservation genomic analyses of two Croatian autochthonous sheep breeds
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Spehar, Marija, Ferenčaković, Maja, Čurik, Ino, Karapandža, Nina, Barać, Zdravko, Sinković, Tanja, and CubricCurik, Vlatka
- Subjects
sheep ,autochthonous breeds ,genomic inbreeding ,LD effective population size - Abstract
Istrian (IS) and Pag (PS) sheep breeds are Croatian autochthonous sheep breeds. We analyzed genotypes of 175 animals (96 IS, and 75 PS) using Illumina OvineSNP50 BeadChip array and estimated genomic inbreeding levels (FROH) and linkage disequilibrium effective population size (NeLD). We also defined the genomic position of IS and PS concerning overall 671 animals of 22 Italian, Spanish and some Merino sheep breeds. For this purpose, we used publicly available data from Dryad digital repository. The inbreeding level based on runs of homozygosity (FROH) was higher in IS compared to PS for FROH>2Mb, 0.08 vs. 0.04, FROH>8Mb, 0.04 vs. 0.03, and FROH>16Mb, 0.02 vs. 0.01 respectively. Software NeEstimator was used to estimate Ne from the parental generation of the sample based on the linkage disequilibrium (LD) method. Estimated NeLD for IS was 101 (95% CI= 81-130), while higher NeLD of 222 (95% CI= 161-343) was obtained for PS. Principal Components Analysis of the overall dataset showed separation of both, IS and PS from other breeds. However, PS was placed near to the cluster containing some Italian breeds (Massese, Appenninica, Sardinian White, Comisana, Leccese, and Laticauda) while IS was slightly remote. To our knowledge, this is the first genomic analysis of IS and PS providing valuable insights into their conservation status.
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- 2019
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- View/download PDF
75. Изучение генетических особенностей и элементного статуса аборигенной тувинской лошади
- Subjects
element composition of hairs ,локальные породы ,микросателлиты ,тувинская лошадь ,эссенциальные (жизненно-необходимые) элементы ,элементный состав волос ,Tuva horse ,DNA ,ДНК ,autochthonous breeds ,essential nutrients ,microsatellites - Abstract
Тувинская лошадь является одной из локальных пород, хорошо приспособленных к условиям круглогодичного табунного содержания. Цель исследования заключалась в изучении элементного статуса и генетических особенностей аборигенной тувинской лошади. Было определено содержание в волосах 19 тувинских лошадей ряда жизненно-необходимых макро- и микроэлементов: кальция, калия, магния, натрия, фосфора, марганца, хрома, меди, железа, кобальта, йода селена и цинка. Также было проведено генотипирование 85 образцов ДНК по 14 локусам микросателлитов: AHT4, AHT5 ASB17, ASB2, ASB23, HMS2, HMS3, HMS6, HMS7, HTG10, HTG4, HTG6, HTG7, VHL20., Tuva horse breed is one of the well-adapted local breeds. The aim of the study was to investigate the element status and genetic characteristics of the Tuva horse. The following essential macro- and microelements were determined in 19 hair samples of Tuva horses: Ca, Co, Cr, Cu, Fe, I, K, Mg, Mn, Na, F, Se, Zn. A total number of 85 DNA samples were genotyped by using 14 microsatellite markers: AHT4, AHT5, ASB17, ASB2, ASB23, HMS2, HMS3, HMS6, HMS7, HTG10, HTG4, HTG6, HTG7, VHL20., №6 (2018)
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- 2018
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76. Post-Thaw Sperm Quality and Functionality in the Autochthonous Pig Breed Gochu Asturcelta.
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Caamaño, José Néstor, Tamargo, Carolina, Parrilla, Inmaculada, Martínez-Pastor, Felipe, Padilla, Lorena, Salman, Amer, Fueyo, Carmen, Fernández, Ángel, Merino, María José, Iglesias, Tania, and Hidalgo, Carlos Olegario
- Subjects
SPERMATOZOA ,FROZEN semen ,GERMPLASM ,REPRODUCTIVE technology ,REACTIVE oxygen species ,SWINE - Abstract
Simple Summary: Genetic resource banks were created to preserve the genetic material of endangered, rare, valuable individuals or genetically relevant breeds. Sperm cryopreservation is a practical and widespread strategy to preserve these genetic materials. This study aimed to characterize the frozen-thawed sperm of the native pig breed Gochu Asturcelta, considering the effects of boar age and season of semen collection on post-thaw sperm quality. We found that the boar age did not have a significant effect on the sperm parameters assessed. However, the season significantly affected many of these parameters (motility, viability, acrosomal status, mitochondrial activity). In general, sperm samples collected in spring and summer showed higher quality post-thawing, the lowest in winter. Our findings demonstrated that the post-thawing sperm quality of Gochu Asturcelta was in the range of results for commercial breeds, bringing a good prospect for the use of assisted reproductive technologies in this local breed. Genetic resource banks (GRB) preserve the genetic material of endangered, valuable individuals or genetically relevant breeds. Semen cryopreservation is a crucial technique to reach these goals. Thus, we aimed to assess the sperm parameters of semen doses from the native pig breed Gochu Asturcelta stored at the GRB of Principado de Asturias (GRB-PA, Gijón, Spain), focusing on intrinsic and extrinsic (boar, season) factors. Two straws per boar (n = 18, 8–71 months of age) were thawed, pooled, and assessed after 30 and 150 min at 37 °C by CASA (computer-assisted sperm analysis system; motility and kinematic parameters) and flow cytometry (viability, acrosomal status, mitochondrial activity, apoptosis, reactive oxygen species, and chromatin status). The effects of age, incubation, and season on post-thawing quality were determined using linear mixed-effects models. Parameters were on the range for commercial boar breeds, with chromatin status (SCSA: fragmentation and immaturity) being excellent. Incubation decreased sperm quality and functionality. The boar age did not have a significant effect (p > 0.05), but the between-boar variability was significant (p < 0.001). The season significantly affected many parameters (motility, kinematics, viability, acrosomal status, mitochondrial activity), especially after 150 min of incubation. In general, samples collected in spring and summer showed higher quality post-thawing, the lowest in winter. In conclusion, the sperm doses from the Gochu Asturcelta breed stored at the GRB-PA showed excellent chromatin status and acceptable characteristics after thawing. Therefore, boar and seasonal variability in this autochthonous breed could be relevant for cryobank management. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
77. Morphological and genetic characterisation of Pagliarola breed and its genetic relationships with other three indigenous Italian sheep breeds
- Author
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Piera Di Lorenzo, Emiliano Lasagna, Francesca Maria Sarti, Simone Ceccobelli, and Francesco Panella
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0301 basic medicine ,Veterinary medicine ,molecular markers ,Population ,Biology ,03 medical and health sciences ,genetic variability ,Genetic variability ,Allele ,education ,lcsh:SF1-1100 ,education.field_of_study ,Autochthonous breeds ,business.industry ,0402 animal and dairy science ,04 agricultural and veterinary sciences ,040201 dairy & animal science ,Breed ,030104 developmental biology ,Morphological analysis ,Microsatellite ,Animal Science and Zoology ,Livestock ,Flock ,lcsh:Animal culture ,business - Abstract
Sheep are an important livestock species in the socio-economic contest around the world. In the past, exotic sheep breeds were utilised in crosses with local breeds in order to improve their production traits. The Pagliarola is an ancient sheep population spread over many areas of the central Italy, mainly in Abruzzo region. The aim of this paper was to identify this breed from other sheep breeds living in the same area trough morphological and genetic characterisation. Fifty-three Pagliarola sheep animals (two flocks) were sampled together with 30 sheep of Appenninica, Gentile di Puglia and Merinizzata Italiana. Biometrical measures and 25 microsatellite markers were studied for the characterisation. In the morphological analysis, the Pagliarola was observed to be well separated from the other breeds and the genomic results confirmed the morphological study. In the molecular approach, a total of 330 alleles were detected. In the neighbour-Net tree, each breed clustered independently and no clear cluster was observed. The expected heterozygosity was the highest in Appenninica (0.78), while Pagliarola had the lowest (0.70). Results of STRUCTURE analyses at K=5 showed Pagliarola breed splitted in two sub-clusters. Both biometric and molecular results allow to consider the residual Pagliarola as an original genotype. Moreover, the variability still remaining in this population can be useful to plan suitable conservation programs.
- Published
- 2016
78. Review of the specific measures for support of the autochthonous breeds in Bulgaria
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Vasil Stoimenov Nikolov
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In situ conservation ,Population ,Introduced species ,dried herbs ,lcsh:Agriculture ,garlic ,autochthonous breeds ,population dynamics ,in situ conservation ,blood biochemical parameters ,education ,Herbivore ,education.field_of_study ,growth performance ,Intensive farming ,Ecology ,business.industry ,Agroforestry ,lcsh:S ,egg production ,mortality ,Breed ,Geography ,Agriculture ,chickens ,Animal Science and Zoology ,business ,Agronomy and Crop Science ,Inclusion (education) - Abstract
The measures for support of 22 autochthonous breeds in Bulgaria are reviewed. It is concluded, that as a whole the support is more effective in the mountainous and semi-mountainous regions, where the opportunities for alternative agriculture are smaller. The numerous funding prerequisites and administrative formalities are some of the main obstacles to the inclusion of more farmers in the support programmes, and a hurdle to the change of the population trends in positive direction. A serious restriction is the requirement for pastures for herbivorous animals in the plane regions with intensive agriculture. In conclusion it is mentioned that the support for preservation of the local autochthonous breeds should be bound only with requirements for retaining the number of the animals and their rearing in traditional for the breed conditions.
- Published
- 2015
79. Microbial deterioration of lamb meat from European local breeds as affected by its intrinsic properties.
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Gonzales-Barron, Ursula, Coelho-Fernandes, Sara, Santos-Rodrigues, Gisela, Choupina, Altino, Piedra, Roberto Bermúdez, Osoro, Koldo, Celaya, Rafael, García, Rocío R., Peric, Tanja, Bianco, Silvia Del, Piasentier, Edi, Chiesa, Francesco, Brugiapaglia, Alberto, Battaglini, Luca, Baratta, Mario, Bodas, Raúl, Lorenzo, José M., and Cadavez, Vasco A.P.
- Subjects
- *
LAMB (Meat) , *SHEEP breeds , *LACTIC acid bacteria , *LAMBS , *ANIMAL handling , *ANIMAL carcasses , *ARTIFICIAL selection of animals - Abstract
• Quality characteristics of lamb meat from eight European breeds was characterised. • Proximate composition of lamb meat was affected by production system. • Substantial variability in the levels of spoilage bacteria in lamb meat was found. • Growth of spoilage bacteria in meat was exarcerbated by higher ultimate pH. • Meat from heavier lamb carcasses underwent a slower spoilage process. Although sheep meat has a small share of ∼1.5 % of the total meat production in the EU, sheep farming is of great importance to rural development and the environment. Enhancing the quality of lamb meat of local breeds is essential to ensure both profitability for sheep producers and the conservation of endangered breeds. This study aimed to (i) characterise the evolution of spoilage microorganisms in refrigerated vacuum-packed lamb meat from a total of 10 farms housing 8 local breeds of Portuguese, Spanish, Italian and Slovenian origin raised in intensive, extensive or semi-extensive regime; and (ii) elucidate how intrinsic properties of meat can affect its microbial spoilage. Cold carcass weight (CCW), ultimate pH (pH 24) and proximate analysis were quantified on carcass/meat from each of the 285 animals raised and slaughtered for this purpose; while mesophiles, lactic acid bacteria, Pseudomonas spp. and psychrotrophic bacteria were enumerated during 15-day storage at 4 °C. Substantial variability in all attributes were found between the ten farms. CCW of intensively-raised lambs (21.4 kg; 95 % CI: 20.6–22.1 kg) were higher (p < 0.05) than the ones in semi-extensive regime (14.9 kg; 95 % CI: 14.4–15.4 kg), and in turn these were heavier (p < 0.05) than the extensively raised lambs (12.4 kg; 95 % CI: 12.0–12.7). Mean contents of protein (76.5–87.4% db), fat (3.78–13.1% db) and ashes (4.62–5.65% db) in lamb meat were highly dependent on the farm. Although meat from some farms was associated to higher microbial levels, in general, microbial growth was found to be modulated by intrinsic properties of meat. Higher pH 24 (p < 0.05), moisture (p < 0.05), protein content (p < 0.05) and ashes content (p < 0.01) accelerated spoilage rate; whereas meat from heavier carcasses (p < 0.001) and of higher fat content (p < 0.01) presented slower growth of spoilage bacteria. In order to improve the microbial quality of lamb meat, animal handling must be enhanced to minimise pre-slaughter stress; slaughtering practices and hygiene must be improved; and a carcass classification system could be adopted towards the selection of fatter animals and chilled carcasses of optimal pH 24. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
80. Microbial deterioration of lamb meat from European local breeds as affected by its intrinsic properties
- Author
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Koldo Osoro, Roberto Bermúdez Piedra, Silvia Del Bianco, Rafael Celaya, Alberto Brugiapaglia, Sara Coelho-Fernandes, Luca Maria Battaglini, Gisela Santos-Rodrigues, Mario Baratta, Edi Piasentier, Altino Choupina, Tanja Peric, Rocío Rosa García, Raúl Bodas, José M. Lorenzo, Ursula Gonzales-Barron, Vasco Cadavez, and Francesco Chiesa
- Subjects
040301 veterinary sciences ,animal diseases ,Food spoilage ,Biology ,medicine.disease_cause ,Autochthonous breeds ,Lactic acid bacteria ,Proximate composition ,Pseudomonas ,Psychrotrophic bacteria ,Sheep ,0403 veterinary science ,Animal science ,Carcass weight ,Food Animals ,Proximate analysis ,medicine ,0402 animal and dairy science ,food and beverages ,04 agricultural and veterinary sciences ,040201 dairy & animal science ,Rural development ,Sheep farming ,Animal Science and Zoology ,Spoilage microorganisms - Abstract
Although sheep meat has a small share of 1.5 % of the total meat production in the EU, sheep farming is of great importance to rural development and the environment. Enhancing the quality of lamb meat of local breeds is essential to ensure both profitability for sheep producers and the conservation of endangered breeds. This study aimed to (i) characterise the evolution of spoilage microorganisms in refrigerated vacuum-packed lamb meat from a total of 10 farms housing 8 local breeds of Portuguese, Spanish, Italian and Slovenian origin raised in intensive, extensive or semi-extensive regime; and (ii) elucidate how intrinsic properties of meat can affect its microbial spoilage. Cold carcass weight (CCW), ultimate pH (pH24) and proximate analysis were quantified on carcass/meat from each of the 285 animals raised and slaughtered for this purpose; while mesophiles, lactic acid bacteria, Pseudomonas spp. and psychrotrophic bacteria were enumerated during 15-day storage at 4 °C. Substantial variability in all attributes were found between the ten farms. CCW of intensively-raised lambs (21.4 kg; 95 % CI: 20.6–22.1 kg) were higher (p lt 0.05) than the ones in semi-extensive regime (14.9 kg; 95 % CI: 14.4–15.4 kg), and in turn these were heavier (p lt 0.05) than the extensively raised lambs (12.4 kg; 95 % CI: 12.0–12.7). Mean contents of protein (76.5–87.4% db), fat (3.78–13.1% db) and ashes (4.62–5.65% db) in lamb meat were highly dependent on the farm. Although meat from some farms was associated to higher microbial levels, in general, microbial growth was found to be modulated by intrinsic properties of meat. Higher pH24 (p lt 0.05), moisture (p lt 0.05), protein content (p lt 0.05) and ashes content (p lt 0.01) accelerated spoilage rate; whereas meat from heavier carcasses (p lt 0.001) and of higher fat content (p lt 0.01) presented slower growth of spoilage bacteria. In order to improve the microbial quality of lamb meat, animal handling must be enhanced to minimise pre-slaughter stress; slaughtering practices and hygiene must be improved; and a carcass classification system could be adopted towards the selection of fatter animals and chilled carcasses of optimal pH24. The authors are grateful to EU ERA-NET programme and the Portuguese Foundation for Science and Technology (FCT) for funding the project “EcoLamb–Holistic Production to Reduce the Ecological Footprint of Meat (SusAn/0002/2016). CIMO authors are grateful to FCT and FEDER under Programme PT2020 for financial support to CIMO (UIDB/00690/2020). Dr. Gonzales-Barron acknowledges the national funding by FCT, P.I., through the Institutional Scientific Employment Programme contract. José M. Lorenzo is member of the HealthyMeat network, funded by CYTED (ref. 119RT0568). The authors would like to acknowledge also Elena Saccà and Angela Sepulcri for providing technical support in laboratory analyses. info:eu-repo/semantics/publishedVersion
- Published
- 2018
81. Variabilità genetica di otto popolazioni caprine dell’Italia centrale valutata tramite un chip SNP a media densità
- Author
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Ceccobelli, S., Costanza, M. T., Lasagna, E., Pieramati, C., Sarti, F. M., and ITALIAN GOAT CONSORTIUM
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autochthonous breeds, goat, genetic diversity, biodiversity ,goat ,genetic diversity ,autochthonous breeds ,biodiversity - Published
- 2018
82. Investigation of the Dalmatian bušak horse type in Dalmatia
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Ema Listeš, Kristina Starčević, Krešimir Severin, Marko Cotman, Ljubo Barbić, and Maja Maurić
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dalmatinski bušak ,autohtone pasmine ,bioraznolikost ,mikrosateliti ,Dalmatian bušak ,autochthonous breeds ,biodiversity ,microsatellites - Abstract
Očuvanje genetske raznolikosti domaćih životinja bitan je segment u razvoju moderne poljoprivredne prakse koji stavlja naglasak na očuvanje autohtonih domaćih pasmina životinja, a samim time i očuvanje bioraznolikosti u svijetu. Jedna od potencijalnih autohtonih pasmina na području Republike Hrvatske, koja je prema Zelenoj knjizi izvornih pasmina Hrvatske svrstana u izumrle i nedovoljno poznate, jest dalmatinski bušak. O navedenoj populaciji nema mnogo podataka, a i oni postojeći vezani su samo uz morfološki opis konja te njegove mjere. S obzirom na to da u Dalmaciji još uvijek postoji mala populacija konja koja svojom konformacijskom građom odgovara potencijalnoj pasmini dalmatinski bušak, napravljene su izmjere konja te su uspoređene s literaturnim podacima. Molekularno-genetskim metodama određena je zastupljenost pojedinih mikrosatelitskih lokusa što bi omogućilo daljnju karakterizaciju i opis populacije. Istraživanje je provedeno na šest konja (2 mužjaka i 4 ženke) starosne dobi od 2,5 do 3,5 godina. Na temelju rezultata mjerenja zaključeno je da su istraživani konji nešto sitnije građe u odnosu na mjere konja iz dostupne literature. Od 17 istraživanih lokusa, 16 je polimorfno, a jedan monomorfan. Prosječna opažena heterozigotnost (HO) iznosi 0,7, a očekivana (HE) 0,6 te je stoga fiksacijski indeks (FIS) negativan. Prosječan informacijski sadržaj polimorfizma (PIC), kao i za većinu lokusa zasebno, upućuje na visokoinformativne markere. Raspon frekvencija alela u svih 17 lokusa kretao se od 8,3% do 100%. Usprkos malom uzorku svi su promatrani lokusi bili u genetskoj ravnoteži prema Hardy-Weinbergovu zakonu. S obzirom na prikupljene rezultate te na mali broj obrađenih jedinki, ovaj je rad početak istraživanja kojim bi se započeo daljnji rad s ciljem očuvanja ove potencijalne autohtone pasmine., In order to preserve global biodiversity and a larger genetic pool, a lot of effort is put on the conservation of domestic animal local autochthonous breeds. One of potential Croatian autochthonous breeds, accordingly to the „Green book of indigenous breeds of Croatia“ classified as extinct or unknown, is Dalmatian bušak. Not much data is available about the aforementioned population, with the only available one being about the morphological description and measurements of the horse. As in Dalmatia there still is a small population of horses that with their physical characteristics correspond to the ones of the Dalmatian bušak, the object of the study was to measure them and compare to the literature data. Also, microsatellite genetic markers were used for further characterization and description of the population. In total six horses (2 males and 4 females), in the age from 2,5 to 3,5 years, were included in the study. Based on body part measurements assessment, the horses in this study were smaller in size compared to the ones from the literature. From 17 investigeted loci, 16 were polymorphic and one monomorphic. The average observed heterozygosity (HO) was 0,7 and expected heterozygosity (HE) was 0,6. Consequently, the fixation index (FIS) was negative. The average polymorphism information content (PIC), as well as the one of most loci separatedly, was highly informative. The frequency range of all 17 loci was from 8,3% to 100%. Despite a small sample, all observed loci were in genetic equilibrium according to the Hardy–Weinberg law. Regardless the small number of animals used, given the obtained results, this research presents the beginning of a study with the goal of preserving this potential autochthonous breed.
- Published
- 2018
83. Motivi, cilji in perspektive rejcev avtohtonih pasem domačih živali
- Author
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Vrisk, Maja and Juvančič, Luka
- Subjects
živinoreja ,avtohtone pasme ,domestic animals ,conservation ,živalski genski viri ,animal breeding ,animal genetic resources ,domače živali ,questionnaires ,ankete ,autochthonous breeds ,ohranjanje - Abstract
Zaradi spreminjajočih podnebnih in tržnih razmer je prisotno večje zavedanje o biotski raznolikosti, ki med drugim zajema tudi genetsko pestrost domačih živali. Ohranjanje živalskih genskih virov je pomembno zaradi njihovih ekonomskih, družbenih in kulturnih koristi, ekološke vloge, proizvodnje hrane, zagotavljanja prehranske varnosti itd. V prizadevanju po ohranitvi živalskih genskih virov in preprečitvi genske erozije je potreben vpogled v motive in cilje ključnih akterjev t.j. rejcev lokalnih pasem domačih živali, na podlagi česar bi jim lahko zagotovili optimalne pogoje za ohranjanje živalskih genskih virov. Pričujoče magistrsko delo skuša dobiti natančnejši vpogled v motive, cilje in perspektive rejcev lokalnih pasem domačih živali v Sloveniji in s tem prispevati k učinkovitejšim strategijam ohranjanja živalskih genskih virov v prihodnje. Ugotovitve temeljijo na rezultatih anketne raziskave, v katerih je sodeloval 301 rejec, vanjo so bili vključeni rejci slovenskih avtohtonih in tradicionalnih pasem. Ugotovili smo, da se slovenski rejci najpogosteje odločajo za rejo avtohtonih pasem domačih živali zaradi kakovosti proizvodov. Med najpomembnejše okoljske in druge družbene koristi avtohtonih pasem izpostavljajo tradicionalnost proizvodov. Seznam motivov je daljši, motivi so kompleksnejši in se razlikujejo med obravnavanimi skupinami. Kot razlog ohranjanja teh pasem slovenski rejci višine podpor ne postavljajo v ospredje, kar se sklada z ugotovitvami podobnih raziskav v drugih državah. K povečanju prireje bi rejce po njihovi oceni najbolj spodbudil 'urejen trg'. Možnosti tržne valorizacije proizvodov avtohtonih pasem so v Sloveniji, z nekaterimi redkimi izjemami, slabo izkoriščene. Due to changing climatic and market conditions, there is a greater awareness of biodiversity, which also includes genetic diversity of domestic animals. Conservation of animal genetic resources is important because of their economic, social and cultural benefits, ecological role, food production, food security, etc. In an effort to conserve animal genetic resources and to prevent genetic erosion, an insight is needed into the motives and objectives of key actors, i.e. breeders of local breeds of domestic animals, on the basis of which they could provide them with optimal conditions for the conservation of animal genetic resources. The present master's thesis aims to provide a more precise insight into the motives, goals and perspectives of breeders of domestic breeds of domestic animals in Slovenia, thereby contributing to more effective strategies for the conservation of animal genetic resources in the future. The findings are based on the results of a survey involving 301 farmers, including breeders of Slovenian indigenous and traditional breeds. We have found that Slovene breeders most often decide on the breeding of autochthonous breeds of domestic animals due to the quality of products. Among the most important environmental and other social benefits of autochthonous breeds, they emphasize the tradition of products. The list of motifs is longer, the motifs are more complex and different from the groups considered. As a reason for the conservation of these breeds, Slovenian breeders do not put the amount of support in the foreground, which is in line with the findings of similar surveys in other countries. In order to increase production, farmers would be most encouraged by the 'regulated market' in their assessment. The possibilities of market valorization of indigenous breeds of products are poorly exploited in Slovenia, with some rare exceptions.
- Published
- 2017
84. Mehanizmi sezonske reprodukcijske aktivnosti pri ovcah
- Author
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Zalar Sterle, Kristina and Čebulj Kadunc, Nina
- Subjects
reproduction ,sheep ,avtohtone pasme ,ovce ,season activity ,Slovenia ,reprodukcija ,Slovenija ,autochthonous breeds ,sezonska aktivnost - Abstract
Namen naloge je bil preučiti mehanizme sezonske reprodukcijske aktivnosti ovc in preučiti, kakšne so v tem smislu reprodukcijske lastnosti slovenskih avtohtonih pasem ovc jezersko-solčavske, bovške in istrske pramenke. Večina pasem ovc je sezonsko poliestričnih, kar pomeni, da se parijo le v določenem obdobju leta. Trajanje in začetek tega pa uravnava več mehanizmov, od katerih je najbolj pomembna fotoperioda oziroma dolžina dnevne svetlobe. Ovce spremembe dolžine dneva in noči zaznavajo preko hipotalamusa, ki uravnava izločanje hormona melatonina iz epifize. Pomembna dejavnika, ki pripomoreta k uravnavanju sezonskih reprodukcijskih ciklusov sta tudi temperatura zraka in padavine, predvsem v tropskem podnebju. Začetek pubertet je prav tako odvisen od več med seboj povezanih dejavnikov, kot so sezona rojstva, velikosti gnezda in pasma, pa tudi prehrana in posledično rejno stanje. Raziskave reprodukcijske aktivnosti slovenskih avtohtonih pasem ovc so bile izvedene na Centru za sonaravno rekultiviranje Vremščice Veterinarske fakultete UL. Rezultati raziskav so bili opisani v številnih znanstvenih publikacijah, ki sem jih uporabila kot vir literature za nalogo. V nalogi bom opisala, pri kateri starosti se pri ovcah teh pasem pojavi puberteta, v katerem obdobju leta se pojavi sezonska reprodukcijska aktivnost in koliko časa traja ter kakšen je potek in trajanje pojatvenega ciklusa. This paper aims to study the seasonal reproductive activity mechanisms of sheep and explore what are the reproductive characteristics of Slovenian indigenous sheep breeds: the Jezersko-Solčava sheep, the Bovec sheep and the Istrian pramenka sheep. The majority of sheep breeds are polyoestrous meaning they only mate in a certain time frame of the year. The beginning and the duration of the mating seasons are regulated by several mechanisms, the most important being the photoperiod or day length. Sheep sense the change in the day length via their hypothalamus that regulates the secretion of the hormone melatonin from the pineal gland. Other important factors in the regulation of seasonal reproductive cycles are also air temperature and precipitation, especially in a tropical environment. The start of sexual maturity also depends on several interconnected factors such as birth season, herd size and breed, as well as nutrition and breeding environment. The research on the reproductive activity of Slovenian indigenous sheep breeds was carried out at the Infrastructure Centre for Sustainable Recultivation (ICSR) Vremščica of the Ljubljana University Veterinary Faculty. The research results were described in numerous scientific publications that have served as technical literature for this paper. In the paper we will describe at which age these sheep breeds enter sexual maturity, in which season they are reproductively active and, finally the course and the duration of the breading cycle.
- Published
- 2017
85. Optimizacija genetskih testov z mikrosatelitnimi označevalci pri drežniški kozi
- Author
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Škerlavaj, Tinkara and Horvat, Simon
- Subjects
avtohtone pasme ,goats ,drežniška koza ,molecular genetics ,molekularna genetika ,microsatellite markers ,koze ,mikrosatelitni označevalci ,autochthonous breeds ,Derežnica goat - Abstract
Drežniška koza je edina slovenska avtohtona pasma koz. Na območju vasi Drežnice se je razvil mesni tip ter na Bovškem mlečni tip živali. Celotni stalež koz vključenih v genetsko banko je približno 200 živali v 24-ih rejskih središčih. V zadnjem času postajajo genetske analize populacij vse bolj uporabno in uporabljano orodje, ki omogoča vpogled v genetsko ozadje in razvoj populacije. Na eni strani omogočajo oceno stanja genetske raznolikosti, oceno zastopanosti osnovalcev in prednikov, kot tudi oceno prispevka vnesenih genov iz tujih populacij. Po drugi strani pa lahko rezultate izkoristimo za postopno spremembo stanja v ogroženih populacijah, saj lahko uravnotežimo prispevke prednikov v sklad genov populacije, poskušamo izenačiti velikost družin, v plemenilni sezoni uporabiti primerno število čim manj sorodnih plemenjakov. Individualne osebke lahko okarakteriziramo na ravni DNK s pomočjo različnih molekularnih tehnik, ki nam omogočajo odkrivanje genetskih razlik med osebki. Mikrosateliti so visoko polimorfni markerji, ki se nahajajo pretežno v nekodogenih regijah genoma, redkeje pa jih najdemo v kodogenih zaporedjih. Obravnavamo jih kot selekcijsko nevtralne markerje in jih pogosto uporabljamo za populacijske študije in diferenciacijo osebkov tudi znotraj populacij z relativno visokim koeficientom sorodstva. Z raziskavo smo želeli optimizirati genetske teste pri drežniški kozi z določitvijo optimalnih markerjev, ter njihove kombinacije v hkratni reakciji PCR. The Drežnica goat is the only Slovenian autochthonous breed of goats. In the area of Drežnica the meat type of goat has been developed and around Bovec valley there has the dairy type of goat been developed. Genetic analysis of animal populations are becoming one of the most useful and used tools in science. Using genetic analyses provides monitoring of genetic background and development of population. They allow assessment of genetic diversity in population as well as the contribution of genes from foreign populations. The genetic results can be used for changing existing population to prevent inbreeding with different tools. Using DNA molecular techniques allowing us to detect differences between species. Microsatelits are one of this techniques. Microsatellites are highly polymorphic loci in regions of DNA containing tandem repeats of a short sequence motif located in noncoding regions. These loci are particularly suitable for population studies because they can be relatively easily scored using a combination of polymerase chain reaction (PCR) amplification of each locus followed by electrophoresis to separate alleles. With the study we want to optimize the genetic test of Drežnica goat with the determination of optimal markers and their combinations in the PCR reaction.
- Published
- 2017
86. Contributo para o estudo de indicadores reprodutivos de caprinos da raça Bravia no concelho de Terras de Bouro no modo de produção biológico e convencional
- Author
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Neto, Maria Isabel da Silva and Araújo, José Pedro Pinto de
- Subjects
Raças autóctones ,Intervalo entre partos ,Autochthonous breeds ,Age of first kidding ,Sazonalidade ,Kidding distribution ,Kidding interval ,Seasonality ,Idade ao primeiro parto ,Distribuição de partos - Abstract
Dissertação de mestrado em Agricultura Biológica, apresentada à Escola Superior Agrária do Instituto Politécnico de Viana do Castelo A caprinicultura no concelho de Terras de Bouro assume-se como uma atividade pecuária económica, ambiental e social relevante. No ano de 2004, foi implementado um projeto para a conversão de explorações em Modo de Produção Convencional (MPC) para o Modo de Produção Biológico (MPB). A Bravia é uma raça autóctone portuguesa vocacionada exclusivamente para a produção de carne, sendo os seus efetivos alimentados significativamente com recurso a vegetação espontânea, disponível em áreas de baldios. Na maioria dos rebanhos da raça Bravia, os machos acompanham sempre as fêmeas, com sazonalidade dos partos. Consistiu o objetivo deste trabalho na avaliação de indicadores reprodutivos (idade ao primeiro parto, intervalo entre partos, distribuição de partos e estrutura etária) de caprinos de raça Bravia, em explorações em MPC e o MPB no concelho de Terras de Bouro. Foram recolhidos, editados e analisados dados entre os anos de 2012 e 2015, referentes a seis explorações, três em MPC e três em MPB, disponibilizados pela Associação Nacional de Criadores da Cabra Bravia (ANCABRA). Na análise estatística utilizou-se o programa Microsoft Excel e o SPSS, para avaliar o efeito do modo de produção nos indicadores reprodutivos. A idade ao primeiro parto (IPP) foi de 27,34±4,90 meses nas explorações em MPC e de 24,90±4,83 meses em MPB com diferenças significativas entre modos (P
- Published
- 2017
87. Compositional attributes and fatty acid profile of lamb meat from Iberian local breeds.
- Author
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Cadavez, Vasco A.P., Popova, Teodora, Bermúdez, Roberto, Osoro, Koldo, Purriños, Laura, Bodas, Raúl, Lorenzo, José M., and Gonzales-Barron, Ursula
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LAMB (Meat) , *CONJUGATED linoleic acid , *FATTY acids , *LINOLEIC acid , *MEAT quality , *PRINCIPAL components analysis - Abstract
• Lamb meat quality depends on the combined effect breed × production system. • BEDM and Gallega reared under extensive conditions had high amounts of n-3 PUFA. • Lambs reared under extensive system had the highest tocopherol and cholesterol levels. • Lambs reared under extensive system had the best n-6/n-3 ratio and high SFA content. • The production system and diet had great influence in meat quality. This study aimed to compare lamb meat composition from five Iberian breeds raised in their typical rearing systems and to reveal trends in compositional meat attributes due to breed or production system. The meat quality of 153 animals was analysed. The combined effect of breed × production system produced significant differences in lamb meat quality. Meat from the extensively-reared Bordaleira-de-Entre-Douro-e-Minho (BEDM) and Gallega breeds had elevated amounts of n-3 PUFAs, tocopherol content and favourable n-6/n-3 ratio. Meat from lambs grown under extensive and semi-extensive systems presented higher content of conjugated linoleic acid than the two breeds reared intensively. The meat of commercial breed (INRA401) was characterised by higher content of protein and MUFAs and lower atherogenic potential than the breeds reared in extensive and semi-extensive systems. Principal component analysis demonstrated that meat from extensively raised lambs was associated to higher SFA, CLA, α-tocopherol, n-3, atherogenic index and cholesterol content, but lower intramuscular fat and retinol content, MUFA and n-6/n-3. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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- View/download PDF
88. The Genomic Variation in the Aosta Cattle Breeds Raised in an Extensive Alpine Farming System.
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Strillacci, Maria Giuseppina, Vevey, Mario, Blanchet, Veruska, Mantovani, Roberto, Sartori, Cristina, and Bagnato, Alessandro
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HILL farming ,CATTLE breeds ,PRINCIPAL components analysis ,INBREEDING - Abstract
Simple Summary: Genetic variability among native cattle breeds can disclose the important features that make a population adapted to harsh environments. The Aosta cattle breeds have been raised and selected for centuries to be farmed in a mountain environment, characterized by a semi-intensive system, i.e., summer pasture with winter recovery on the farms. To disclose the genomic variation and its association with known genes, it is important to genetically characterize these breeds. The Aosta Red Pied (Valdostana Pezzata Rossa (VRP)), the Aosta Black Pied (Valdostana Pezzata Nera (VBP)) and the Aosta Chestnut (Valdostana Castana (CAS)) are dual-purpose cattle breeds (meat and milk), very well adapted to the harsh environmental conditions of alpine territories: their farming is in fact characterized by summer pasture at very high altitude. A total of 728 individuals were genotyped with the GeenSeek Genomic Profiler® (GGP) Bovine 150K Illumina SNP chip as a part of the DUALBREEDING-PSRN Italian-funded research project. The genetic diversity among populations showed that the three breeds are distinct populations based on the F
ST values, ADMIXTURE and Principal Component Analysis (PCA) results. Runs of Homozygosity (ROH) were obtained for the three populations to disclose recent autozygosity. The genomic inbreeding based on the ROH was calculated and coupled with information derived from the F (inbreeding coefficient) and FST parameters. The mean FROH values were low: CAS = 0.06, VBP = 0.05 and VRP = 0.07, while the average F values were −0.003, −0.01 and −0.003, respectively. The annotation and enrichment analysis, performed in the identified most frequent ROH (TOP_ROH), showed genes that can be linked to the resilience capacity of these populations to harsh environmental farming conditions, and to the peculiar characteristics searched for by farmers in each breed. [ABSTRACT FROM AUTHOR]- Published
- 2020
- Full Text
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89. Gastrointestinal parasites as a threat to grazing sheep
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Ruano, Z. M., Nuno Carolino, and Mateus, T. L.
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Autochthonous breeds ,Meat production ,Animal welfare ,Parasites ,Grazing sheep - Abstract
Despite pressure to increase farm productivity, a tendency for animal-friendly production systems, like the one that includes grazing, is becoming more common due to an increased consumer awareness of animal welfare. Pasture is generally the main food source for these animals. Grazing sheep are therefore exposed to a huge diversity of parasites. These parasites impact greatly on animal health, welfare and productivity, and can be responsible for high economic losses due to delayed development of lambs and low productivity levels of adult sheep, which can be especially threatening in endangered breeds. Nematodes of the genera Haemonchus, Trichostrongylus, Teladorsagia, Cooperia and Nematodirus can cause serious health problems in sheep. Haemonchus contortus is responsible for the main health problems in sheep, and represents a significant cause of mortality worldwide. Nematodirus battus is a common cause of lamb diarrhoea. Some trematodes, besides affecting animal health, are zoonotic and may have health implications for farmers and local communities. Prophylaxis plans are essential in order to keep acceptable infection levels. A detailed knowledge of parasite species involved, as well as their burden and prevalence, is necessary. Pasture management should be a primary tool to control parasites. Integration of more than one measure like good farming practices, and appropriate biological control measures is essential to achieve the sustainable control on the parasites. Anti-parasitic drugs are still an important part of parasite control in grazing sheep. Consumers worry about the quality of meat as well as about the animal welfare, but studies of the effects of parasites are scarce, and there is a concern that grazing management systems increase the prevalence of parasites. The question is whether to choose less productive breeds but well adapted to the local environmental conditions (autochthonous breeds) and more resistant to parasites, or high productive breeds but not adapted to the local environment and its parasites. The aim of this review was to understand the current situation of the prevalence of gastrointestinal parasites in grazing sheep, and the consequences on sheep management and the effects on meat quality. A91F-E8B8-FA62 | Teresa Susana Letra Mateus N/A
- Published
- 2017
90. Scrapie incidence and PRNP polymorphisms : Rare small ruminant breeds of Sicily with TSE protecting genetic reservoirs
- Author
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Maria La Giglia, Maria Vitale, Jan P. M. Langeveld, Placido Alberti, Vincenzo Di Marco Lo Presti, and Sergio Migliore
- Subjects
0301 basic medicine ,Veterinary medicine ,Breeding program ,040301 veterinary sciences ,animal diseases ,Population ,Sheep Diseases ,Scrapie ,Biology ,Crossbreed ,Prion Proteins ,PRNP ,0403 veterinary science ,03 medical and health sciences ,Animals ,Breeding programs ,TSE ,education ,Sicily ,Allele frequency ,Alleles ,Host Pathogen Interaction & Diagnostics ,education.field_of_study ,Autochthonous breeds ,Goat Diseases ,Polymorphism, Genetic ,Sheep ,General Veterinary ,Goats ,Incidence ,Bacteriologie ,Outbreak ,Bacteriology ,04 agricultural and veterinary sciences ,General Medicine ,Bacteriology, Host Pathogen Interaction & Diagnostics ,Scrapie surveillance ,veterinary(all) ,Host Pathogen Interactie & Diagnostiek ,nervous system diseases ,PRNP polymorphism ,030104 developmental biology ,Bacteriologie, Host Pathogen Interactie & Diagnostiek ,Research Article - Abstract
Background Transmissible spongiform encephalopathies (TSE) are fatal neurodegenerative diseases of several mammalian species, including humans. In Italy, the active surveillance through rapid tests on brain stem from small ruminants started in 2002 on randomly selected samples of healthy slaughtered animals. Sampling number was proportionally related to the regional small ruminant population. Of the twenty Italian regions, Sicily has the second largest population of small ruminants which is mainly constituted by crossbreed animals (>70 %). Sicily contains also three native sheep breeds Pinzirita, Comisana and Valle del Belice. Native goat breeds are Girgentana, Messinese, Argentata dell’Etna, Maltese and Rossa Mediterranea. The polymorphisms of prion protein gene (PRNP) may influence disease susceptibility and breeding programs for genetic TSE resistance are being applied in sheep. Protective alleles have been recently reported for goats also. These differ from those in sheep and may allow breeding programs in the near future. In this paper the data of active surveillance for scrapie control in general population of small ruminants in Sicily are reported together with the analysis on the polymorphism of PRNP in a number of Sicilian autochthonous breeds. The evaluation of the frequency of protective alleles is fundamental for the implementation of a TSE resistance breeding program. Results TSE surveillance in small ruminants in Sicily showed a of total fifty seven scrapie outbreaks from 1997 to 2014 involving mainly crossbreed animals. The PRNP polymorphism analysis in autochthonous breeds showed protective allele frequencies of 30–40 % ARR in sheep and 12–18 % K222 in three of the four goat breeds; these breeds are distributed over limited areas of the island. Conclusion The study on PRNP polymorphisms in Sicilian small ruminant population showed higher frequency of the protective alleles compared to most other European breeds. Our results suggest that PRNP genetic variety in Sicilian sheep and goats can be a resource for TSE resistance breeding programmes while maintaining the conservation of endangered breeds and valorisation of their typical food products. Electronic supplementary material The online version of this article (doi:10.1186/s12917-016-0766-9) contains supplementary material, which is available to authorized users.
- Published
- 2016
91. Environmental impacts of pig production systems using European local breeds: The contribution of carbon sequestration and emissions from grazing.
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Monteiro, Alessandra Nardina Trícia Rigo, Wilfart, Aurélie, Utzeri, Valerio Joe, Batorek Lukač, Nina, Tomažin, Urška, Costa, Leonardo Nanni, Čandek-Potokar, Marjeta, Fontanesi, Luca, and Garcia-Launay, Florence
- Subjects
- *
CARBON sequestration , *SWINE , *CLIMATE change mitigation , *NATURAL resources , *ENVIRONMENTAL impact analysis , *LAND use , *GRAZING , *RANGE management - Abstract
Environmental assessment of pig production systems using local breeds remains poorly documented in the literature. So far, studies did not account for specificities of outdoor rearing which is quite common in such systems. The present study aimed at evaluating the environmental impacts of pig production systems using local breeds in Europe, while accounting for emissions associated to consumption of grass and mitigation of impacts through soil-C sequestration. Environmental impacts were estimated for 48 farms using local pig breeds: 25 in France (Gascon breed), eight in Italy (Mora Romagnola breed) and 15 in Slovenia (Krškopolje breed). Assessment was performed with and without accounting for pasture-intake emissions and potential soil-C sequestration. The data were obtained from on-farm surveys. Systems with Gascon pigs had the lowest impacts per kg of live weight for global warming and cumulative energy demand, due to lower impacts of feeds. Acidification potential was higher for Krškopolje pigs due to high dietary crude protein content and high AP of feeds, while eutrophication potential was higher for Gascon pigs due to higher phosphorus content of feeds (28% higher than the mean of the other farms). When impacts were expressed per ha of land use, pig production in Gascon farms had the lowest impacts due to more available area per pig, except for eutrophication. Low contribution of soil-C sequestration to climate change mitigation was observed (4.7% on average). However, it may have a substantial contribution for the most extensive pig systems using large land surfaces. Emissions resulting from grazing had a rather low contribution to Global Warming Potential (4%) and Eutrophication (3%), but a substantial one to Acidification impact (9% on average). In the frame of our study, the contribution of emissions related to grazing is moderate because commercial feed supply for outdoor pigs was higher than in extensive systems studied in literature. This study highlighted that main hotspots include feed composition and supply and the origin of feed ingredients. It also suggests that future assessments of extensive pig systems relying on pig foraging on grasslands or rangelands should account for soil-C sequestration and emissions associated to grazing and foraging. • Grazing emissions and potential carbon sequestration were estimated. • Farms had great variability in environmental impacts. • Systems relying the most directly on natural resources had the lowest impacts. • Outdoor systems can reduce CO 2 emissions by sequestering carbon. • Feed composition, supply and feedstuffs origin are hotspots for improvement. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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92. Population Structure and Genetic Diversity of Italian Beef Breeds as a Tool for Planning Conservation and Selection Strategies.
- Author
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Fabbri, Maria Chiara, Gonçalves de Rezende, Marcos Paulo, Dadousis, Christos, Biffani, Stefano, Negrini, Riccardo, Souza Carneiro, Paulo Luiz, and Bozzi, Riccardo
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BEEF quality ,CATTLE breeds ,CLIMATE change ,BREEDING ,BEEF products ,BEEF - Abstract
Simple Summary: The recent alarming reports on global climate change and the challenges facing the agricultural sector to meet the increase in meat consumption, impose research in biodiversity. An important genetic pool of local breeds might play a crucial role in the near future to address these challenges. Although Italy is considered as one of the richest countries in biodiversity, there are autochthonous cattle breeds under extinction. To safeguard biodiversity and increase genetic diversity within breeds, appropriate management tools must be developed. To achieve this, precise knowledge of the population structure and genetic diversity per breed are required. This study analyzed pedigree data of six local beef breeds: Calvana, Mucca Pisana, and Pontremolese (from the region of Tuscany), all under extinction, and Sarda, Sardo Bruna, and Sardo Modicana, from the island of Sardinia, that are larger in number but of lower productivity. In addition, the study investigated the population structure of the cosmopolitan beef breeds, Charolais and Limousine, reared in the same regions and undergoing selection. The high mating percentage between relatives for Mucca Pisana and Calvana is an alarming situation for these breeds. The population structure of the Sardinian breeds suggests the application of breeding programs. The aim was to investigate the population structure of eight beef breeds: three local Tuscan breeds under extinction, Calvana (CAL), Mucca Pisana (MUP), and Pontremolese (PON); three local unselected breeds reared in Sardinia, Sarda (SAR), Sardo Bruna (SAB), and Sardo Modicana (SAM); and two cosmopolitan breeds, Charolais (CHA) and Limousine (LIM), reared in the same regions. An effective population size ranges between 14.62 (PON) to 39.79 (SAM) in local breeds, 90.29 for CHA, and 135.65 for LIM. The average inbreeding coefficients were higher in Tuscan breeds (7.25%, 5.10%, and 3.64% for MUP, CAL, and PON, respectively) compared to the Sardinian breeds (1.23%, 1.66%, and 1.90% in SAB, SAM, and SAR, respectively), while for CHA and LIM they were <1%. The highest rates of mating between half-siblings were observed for CAL and MUP (~9% and 6.5%, respectively), while the highest rate of parent–offspring mating was ~8% for MUP. Our findings describe the urgent situation of the three Tuscan breeds and support the application of conservation measures and/or the development of breeding programs. Development of breeding strategies is suggested for the Sardinian breeds. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
93. Study on the reproductive capacity of bulls of the autochthonous Rhodope Shorthorn cattle breed
- Author
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Vasil Stoimenov Nikolov and Radka Malinova
- Subjects
media_common.quotation_subject ,Artificial insemination ,medicine.medical_treatment ,lcsh:S ,Ejaculate volume ,Semen ,semen ,Biology ,rhodope shorthorn cattle ,Breed ,reproduction ,lcsh:Agriculture ,Animal science ,cattle ,medicine ,Animal Science and Zoology ,Reproductive capacity ,Reproduction ,autochthonous breeds ,Agronomy and Crop Science ,Shorthorn cattle ,Spermatogenesis ,media_common - Abstract
The sperm production of bulls from the autochthonous Rhodope Shorthorn cattle breed was studied. The breed is among the smallest in Europe, the average weight of the cows ranging from 200 to 250 kg, and of the bulls from 330 to 370 kg. It was found that during the first 6 months from the start of exploitation, at the age of the bulls from 18 to 24 months, AI bulls had high reproductive capacity. The ejaculate volume was 1,74±0,09 ml in average (LS), the percentage of motile spermatozoa was 74,3±3,48% and the concentration 1268±13,1 x 106/ml. It was established that the bull had a significant impact on the reproductive performance, but the individual differences in the main characteristics were not high – motility 71,8-77,0%, concentration – 1222-1324 х 106/ml. The season also had a significant effect on the percentage of motile spermatozoa. Within the period from January to June, the highest reproductive capacity of the bulls was observed from February to May and the lowest in June.
- Published
- 2015
94. Milking characteristics of Istrian and Littoral- dinaric donkey breeds
- Author
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Ivanković, Ante, Ramljak, Jelena, Potočnik, Klemen, Baban, Mirjana, Stručić, Danijela, and Popović, Zoran
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fluids and secretions ,food and beverages ,donkey ,autochthonous breeds ,milk ,chemical composition ,utilisation - Abstract
Istrian and Littoral Dinaric donkey are autochthonous breeds which habitat primarily in the Mediterranean part of Croatia. During the second half of the 20th century they have lost primary function as working animal, which led to breeds suppression. Nowadays these two breeds are in the status of endangered ones. One of the possibilities for their economic re- affirmation is launching the program for production and processing donkey’s milk. The aim of the study was to determine the possibility of milk production of Istrian and Littoral Dinaric jennies in terms of quantity and chemical composition. Istrian jennies produce 745.4 mL/milking while Littoral Dinaric produce 317.8 mL/milking. Milk form Littoral Dinaric jennies contained a significantly higher proportion of milk fat and proteins. There were no significant differences in the content of lactose, dry matter, number of somatic cells and microorganisms in milk between these two breeds. Considering the potential for milk production and milk quality, we believe that both breeds are suitable for integration in the programs for milk production, thus enabling for both population to be economically sustainable. It is necessary to develop production technology and markets, with special emphasis considering quality of donkey milk and safety of consumers.
- Published
- 2014
95. Fat quality in the indigenous Krškopolje pig reared in an enriched environment
- Author
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Milena Kovač, Marjeta Žemva, T.M. Ngapo, Alenka Levart, and Špela Pezdevšek Malovrh
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Krskopolje pig ,Biology ,intramuscular fat ,lcsh:Agriculture ,fatty acid composition ,Processed meat ,Food science ,Longissimus dorsi ,Water Science and Technology ,Krškopolje pig ,chemistry.chemical_classification ,back subcutaneous fat ,lcsh:S ,food and beverages ,pigs ,Breed ,Biochemistry ,chemistry ,quality ,lipids (amino acids, peptides, and proteins) ,Fatty acid composition ,Subcutaneous adipose tissue ,Intramuscular fat ,General Agricultural and Biological Sciences ,autochthonous breeds ,Polyunsaturated fatty acid ,enriched environment - Abstract
The search for fat composition and content that is favourable in intramuscular fat (IMF) for fresh meat quality and at the same time in subcutaneous adipose tissue (SCF) for processed meat products, within the same breed, is reflected in the growing interest in native pig breeds. The aim of this study was to determine the fatty acid composition of the IMF of M. longissimus dorsi (LD) and adjacent SCF from the Slovenian indigenous Krškopolje pig. The type of fat from the 42 Krškopolje pig significantly affected the proportions of 29 of the 35 fatty acids measured here. The SCF contained higher proportions of saturated fatty acids (SFA) and polyunsaturated fatty acids (PUFA) and correspondingly less monounsaturated fatty acids (MUFA) than the IMF. Taking the extremes, the IMF at 6–10 % of the LD had higher proportions of SFA and MUFA and less PUFA than the IMF at 2–3 %. The thicker SCF (57–67 mm) was higher in SFA and lower in PUFA than thinner (30–40 mm). Sex and age also affected fatty acid composition; the fat from barrows was higher in MUFA and lower in PUFA than that from gilts, and with increasing age, MUFA content increased.
- Published
- 2014
96. Presentation of examples of good practice to keep slovenian indigenous breeds of farm animals
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Kompan, Drago
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products ,good practice ,autochthonous breeds ,livestock biodiversity - Abstract
In Slovenia, we have 12 autochthonous farm animals breeds (together with Carniolan honey bee) which are trying to maintain in a very different way. There is a public service for the preservation of animal genetic resources, which annually monitors the situation and assesses the threat condition. In this context, exists each year a workshop, organized by the public service, attended by farmers and agricultural experts and consultants and representatives of non-governmental organizations. In 2012, the workshop was designed to present best practices by breeders; farmers which bred Slovenian autochthonous livestock breeds. They presented the history of the farm, tradition, experience, examples of products and approaches to marketing and plans for the future. They present the cases in the field of cattle, sheep, goat, pig, poultry and beekeeping. International NGO SAVE is presented as part of the promotion and identified products introduced by the program HERITASTE and becoming more and more recognizable brand of products from indigenous farm animal breeds and old varieties of crops.
- Published
- 2013
97. POULTRY BREEDING IN THE REBUBLIC OF CROATIA – SITUATION AND PERSPECTIVES
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Gordana Kralik, Igor Kralik, Zlata Kralik, and Zlatko Janječić
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perad ,brojnost ,meso ,jaja ,autohtone pasmine ,funkcionalni sastojci ,poultry ,population ,meat ,eggs ,autochthonous breeds ,functional ingredients - Abstract
Peradarska proizvodnja je značajna grana stočarske proizvodnje u Republici Hrvatskoj. U radu se prikazuju specifičnosti razvoja peradarske proizvodnje (mesa i jaja) od 2006. do 2011. godine, uvoz, izvoz, kao i bilanca potrošnje mesa peradi. Ukupan broj svih vrsta peradi u 2006. godini bio je 10,087 mil. kljunova, ali je do 2011. godine smanjen na 9,523 mil. kljunova, odnosno 5,6%. U ukupnom fondu svih vrsta peradi, kokoši sudjeluju s 82,75%, pure 11,93%, patke 3,37%, guske 0,77%, a ostala perad s 1,18%. Prirast peradi smanjen je za 21%, a proizvodnja jaja za 18,2%. Izračunati su trendovi proizvodnje mesa i prirasta peradi, kao i proizvodnje jaja za analizirano razdoblje. Prikazani su konvencionalni i alternativni sustavi proizvodnje u peradarstvu. Posebno je istaknuta važnost proizvoda peradi u ljudskoj prehrani te sastav nutrijenata u mesu i jajima. Važni nutricini (funkcionalni sastojci) na koje se stavlja naglasak u radu su n -3 PUFA, karnozin i lutein. Na sastav i sadržaj masnih kiselina u mesu i jajima može se utjecati sastavom obroka za perad tj. uključivanjem biljnih i animalnih ulja u obrok. Karnozin je dipeptid, a obogaćivanje mesa ovim funkcionalnim sastojkom može se postići dodavanjem β-alanina i histidina u hranu za piliće. U radu se ističe antioksidativno djelovanje karnozina u živom tkivu i mesu jer se karnozin danas izučava kao „antiageing“ čimbenik. Selen kao mikroelement pokazuje bolju učinkovitost u organskom, nego anorganskom obliku pri deponiranju u mesu, žumanjku i bjelanjku. Meso i jaja peradi mogu se koristiti za proizvodnju funkcionalnih namirnica. U radu se također opisuju autohtone pasmine peradi kao što su zagorski puran i kokoš hrvatica. Na kraju se anticipiraju mogućnosti daljnjeg razvoja peradarske proizvodnje u našoj zemlji., Poultry production is an important branch of animal husbandry in the Republic of Croatia. This paper presents an overview of developments in the poultry production referring to meat and eggs in the period from 2006 to 2011, as well as import, export, and poultry meat consumption. Total poultry population in 2006 was 10.087mil. of heads, in 2011 that number was reduced by 5.6%, being 9.523 mil. In total poultry population there were 82.75% of chickens, 11.93% of turkeys, 3.37% of ducks, 0.77% of geese, and 1.18% referred to other types of poultry. Poultry breeding was lowered by 21%, and egg production was reduced by 18.2%. The trends in meat and egg production and poultry breeding were calculated for the analyzed period. There were conventional and alternative poultry production systems presented in the paper. Emphasis was put to importance on poultry products in human nutrition, as well as on nutritive values in meat and eggs. The n -3 PUFA, carnosine and lutein were pointed out in the paper as important nutricines (functional ingredients). Composition of poultry diets, i.e. dietary supplementation with plant and animal oils can affect fatty acids content and composition in meat and eggs. Carnosine is a dipeptide which can be applied as functional ingredient for enrichment of meat within dietary supplementation of β-alanine and histidine. Antioxidative effects of carnosine in live tissue and meat were stressed out in the paper, as carnosine is being studied for its „anti-ageing“ actions. Selenium as a microelement exhibits better efficiency in organic than in inorganic form while being deposited in meat, egg yolk and albumen. Poultry meat and eggs can be used for production of functional food. This paper also presents autochthonous poultry breeds, such as Zagorje turkey and Hrvatica hen. Possibilities of further developments in poultry production in Croatia were also anticipated in this paper.
- Published
- 2012
98. Características de la carne de pollos del cruce F1 de dos razas españolas mejoradas en función de la edad de sacrificio
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Miguel, J. A., Escoda, L., Cubilo, M. D., Tor, M., Asenjo, B., Ciria, J., and Francesch, A.
- Subjects
animal structures ,food and beverages ,ácidos grasos ,Castellana Negra ,grasa ,Penedesenca Negra ,producciones animales alternativas ,razas autóctonas ,alternative animal production ,autochthonous breeds ,fat ,fatty acids - Abstract
The present study analysed the meat characteristics of i) improved Castellana Negra chickens slaughtered at 18 weeks (CN-18) and ii) F1 crossbred chickens from improved Castellana Negra hens and improved Penedesenca Negracocks (CNPN) slaughtered at 12 weeks and 18 weeks of age (young and adult animals, respectively). Purebred andcrossbred specimens were compared at similar weights (CN-18 and CNPN-12) and ages (CN-18 and CNPN-18). The protein content of the meat was similar for the three types of animals; heavier animals (CNPN-18) had more fat thanthose slaughtered at lower weights (CNPN-12 and CN-18). Adults had a higher saturated fatty acid content and theyoung CNPN chickens had more monounsaturated fatty acids than CN chickens. In the CNPN adults, less water was lost during cooking, which is directly related to the juiciness of the meat. With regard to sensory analysis, a darker colour was observed in the meat as much as the internal fat of adult animals, in addition to greater colour uniformity. The meat of young CNPN birds was juicier, whereas that of the CN chickens was more fibrous. Therefore, we conclude that meat from CNPN chickens presents chemical, physical, and sensorial characteristics that make these animals a genetic base for alternative poultry production., En este trabajo se estudiaron las características de la carne de pollos mejorados de raza Castellana Negra sacrificados a las 18 semanas (CN-18) y de pollos del cruce F1 de gallinas mejoradas de raza Castellana Negra y gallos mejoradosde la raza Penedesenca Negra (tipo CNPN), sacrificados a las 12 y 18 semanas de vida (CNPN-12 y 18, animales jóvenes y adultos, respectivamente), con el fin de comparar la raza pura y el cruce sacrificados con peso similar (CN-18 y CNPN-12) y con la misma edad (CN-18 y CNPN-18). El contenido en proteína de la carne fue similar para los tres tipos de animales, y en grasa, los animales de mayor peso (CNPN-18) presentaron mayores contenidos que los sacrificados con pesos inferiores (CNPN-12 y CN-18). Los adultos presentaron mayor contenido en ácidos grasos saturados y el tipo CNPN joven mayor en monoinsaturados que el CN. En los tipo CNPN adultos se observaron unas menores pérdidas de agua por cocción, variable relacionada directamente con la jugosidad de la carne. Respecto al análisis sensorial, se observó un color más oscuro, tanto de la carne como de la grasa interna, en los animales adultos, así como una uniformidad mayor de ese color. La carne de los CNPN-12 resultó más jugosa, mientras que la de los CN-18 fue la más fibrosa. Así pues, podemos concluir que la carne de los pollos CNPN presenta unas características químicas, físicas y sensoriales, que hacen de estos animales una base genética adecuada para la producción avícola alternativa.
- Published
- 2011
99. Características de la carne de pollos del cruce F1 de dos razas españolas mejoradas en función de la edad de sacrificio
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J. Ciria, L. Escoda, Marc Tor, B. Asenjo, J. A. Miguel, A. Francesch, and M. D. Cubilo
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Penedesenca Negra ,animal structures ,Castellana Negra ,media_common.quotation_subject ,Pollastres ,Biology ,Greix ,Sensory analysis ,Crossbreed ,Grasa ,Animal science ,Inbred strain ,Fatty acids ,Slaughter age ,producciones animales alternativas ,ácidos grasos ,media_common ,Autochthonous breeds ,business.industry ,food and beverages ,Alternative animal production ,Saturated fatty acid ,Livestock ,Reproduction ,business ,razas autóctonas ,Agronomy and Crop Science ,Purebred - Abstract
The present study analysed the meat characteristics of i) improved Castellana Negra chickens slaughtered at 18 weeks (CN-18) and ii) F1 crossbred chickens from improved Castellana Negra hens and improved Penedesenca Negracocks (CNPN) slaughtered at 12 weeks and 18 weeks of age (young and adult animals, respectively). Purebred andcrossbred specimens were compared at similar weights (CN-18 and CNPN-12) and ages (CN-18 and CNPN-18). The protein content of the meat was similar for the three types of animals; heavier animals (CNPN-18) had more fat thanthose slaughtered at lower weights (CNPN-12 and CN-18). Adults had a higher saturated fatty acid content and theyoung CNPN chickens had more monounsaturated fatty acids than CN chickens. In the CNPN adults, less water was lost during cooking, which is directly related to the juiciness of the meat. With regard to sensory analysis, a darker colour was observed in the meat as much as the internal fat of adult animals, in addition to greater colour uniformity. The meat of young CNPN birds was juicier, whereas that of the CN chickens was more fibrous. Therefore, we conclude that meat from CNPN chickens presents chemical, physical, and sensorial characteristics that make these animals a genetic base for alternative poultry production. En este trabajo se estudiaron las características de la carne de pollos mejorados de raza Castellana Negra sacrificados a las 18 semanas (CN-18) y de pollos del cruce F1 de gallinas mejoradas de raza Castellana Negra y gallos mejoradosde la raza Penedesenca Negra (tipo CNPN), sacrificados a las 12 y 18 semanas de vida (CNPN-12 y 18, animales jóvenes y adultos, respectivamente), con el fin de comparar la raza pura y el cruce sacrificados con peso similar (CN-18 y CNPN-12) y con la misma edad (CN-18 y CNPN-18). El contenido en proteína de la carne fue similar para los tres tipos de animales, y en grasa, los animales de mayor peso (CNPN-18) presentaron mayores contenidos que los sacrificados con pesos inferiores (CNPN-12 y CN-18). Los adultos presentaron mayor contenido en ácidos grasos saturados y el tipo CNPN joven mayor en monoinsaturados que el CN. En los tipo CNPN adultos se observaron unas menores pérdidas de agua por cocción, variable relacionada directamente con la jugosidad de la carne. Respecto al análisis sensorial, se observó un color más oscuro, tanto de la carne como de la grasa interna, en los animales adultos, así como una uniformidad mayor de ese color. La carne de los CNPN-12 resultó más jugosa, mientras que la de los CN-18 fue la más fibrosa. Así pues, podemos concluir que la carne de los pollos CNPN presenta unas características químicas, físicas y sensoriales, que hacen de estos animales una base genética adecuada para la producción avícola alternativa.
- Published
- 2011
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100. The share of tissues in pig carcass sides of autochthonous breeds depending on the body mass and sex
- Author
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Nikola Stanišić, Milan P. Petrović, Nenad Parunović, Čedomir Radović, Dragan Radojković, and M. Mijatovic
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Muscle tissue ,pig ,Veterinary medicine ,General Mathematics ,animal diseases ,Biology ,Thigh ,Bone tissue ,01 natural sciences ,Subcutaneous fat ,0103 physical sciences ,medicine ,010303 astronomy & astrophysics ,2. Zero hunger ,Moravka ,carcass side ,Applied Mathematics ,0402 animal and dairy science ,04 agricultural and veterinary sciences ,Software package ,Intermuscular fat ,040201 dairy & animal science ,Breed ,Swallow-Belly Mangalitsa ,medicine.anatomical_structure ,autochthonous breeds ,Body mass index - Abstract
Objective of this paper was to determine the distribution of tissues in four major carcass side parts from fatteners of Swallow-Belly Mangalitsa and Moravka breeds. The study included 42 animals (male castrated and female pigs) of Swallow-Belly Mangalitsa strain (LM, n=19) and Moravka (M, n=23). Animals were kept and reared in the same farm conditions with free ranges. During fattening, animals were fed two complete mixtures containing 15 and 13% crude proteins. Dissection of left carcass sides and calculation of the meat percentage were carried out according to EU reference method (EC, No.3127/94). Obtained data was processed using GLM procedure of the software package SAS 9.1.3 (SAS Inst.Inc., 2002-2003). Pre-slaughter body mass influenced variation of the mass of warm and cooled carcass sides (P (lt) .0001). Pre-slaughter body mass of SBM and M had impact on variation of the subcutaneous fat tissue and skin in the thigh and shoulder, and on bone tissue in the shoulder. Fatteners of Moravka breed had higher average mass of back-loin part of the carcass sides (P (lt) 0.01) and mass of subcutaneous fat tissue including the skin (P (lt) 0.05) compared to Swallow-Belly Mangalitsa. Share of muscle tissue of this carcass part in total mass of muscle tissue in all four carcass side parts was higher in Moravka breed pigs (+2.18%, P (lt) 0.01). Male castrated pigs had lower values of average mass of the thigh/leg (P (lt) 0.05), lower values of muscle tissue mass in the thigh/leg (P (lt) 0.01) and higher share of bone tissue (P (lt) 0.05) compared to female pigs. In the belly-rib part, castrates had less intermuscular fat tissue (P (lt) 0.05) and bone tissue (P (lt) 0.05) than female pigs. Cilj ovog rada je bio da se utvrdi udeo tkiva u četiri glavna dela polutki tovljenika lasaste mangulice i moravke u zavisnosti od telesne mase pri klanju i pola grla. Na variranje mase toplih i hladnih polutki uticala je telesna masa pri klanju (P (lt) .0001). U četiri glavna dela polutki bilo je od 36,02 do 38,59% mišićnog tkiva. Potkožno masno tkivo, koža i intermuskularno masno tkivo činili su od 52,64 do 56,24% mase buta, plećke, leđno-slabinskog i trbušno-rebarnog dela polutke. Telesna masa pri klanju grla rase LM i M je uticala na variranje potkožnog masnog tkiva i kože u butu i plećki i na koštano tkivo u plećki. Tovljenici rase moravka imali su veću prosečnu masu ledjno-slabinskog dela polutki (P (lt) 0,01) i masu potkožnog masnog tkiva sa kožom (P (lt) 0,05) od lasaste mangulice. Udeo mišićnog tkiva ovog dela u ukupnoj masi mišićnog tkiva u četiri dela polutki, bio je veći kod grla rase moravka (+2,18%, P (lt) 0,01). Muška kastrirana grla su imala manju prosečnu masu buta (P (lt) 0,05), manju masu mišićnog tkiva u butu (P (lt) 0,01) i veći udeo koštanog tkiva (P (lt) 0,05) od ženskih grla. U trbušno-rebarnom delu, kastrati su imali manje intermuskularnog masnog tkiva (P (lt) 0,05) i koštanog (P (lt) 0,05) od ženskih grla.
- Published
- 2011
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