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The maintenance of hemostasis to ensure vascular integrity is dependent upon the rapid conversion of zymogen species of the coagulation cascade to their enzymatically active forms. This process culminates in the generation of the serine protease thrombin and polymerization of fibrin to prevent vascular leak at sites of endothelial cell injury or loss of cellular junctions. Thrombin generation can be initiated by the extrinsic pathway of coagulation through exposure of blood to tissue factor at sites of vascular damage, or alternatively by the coagulation factor (F) XII activated by foreign surfaces with negative charges, such as glass, through the contact activation pathway. Here, we used transient particle tracking microrheology to investigate the mechanical properties of fibrin in response to thrombin generation downstream of both coagulation pathways. We found that the structural heterogeneity of fibrin formation was dependent on the reaction kinetics of thrombin generation. Pharmacological inhibition of FXII activity prolonged the time to form fibrin and increased the degree of heterogeneity of fibrin, resulting in fibrin clots with reduced mechanical properties. Taken together, this study demonstrates a dependency of the physical biology of fibrin formation on activation of the contact pathway of coagulation.

Small farms and small farmers are a growing sector of the agricultural economy nationwide. Notably, small farms are influenced by similar antagonists to the success of their business as large, concentrated operations, but they experience it differently. The purpose of this study was to describe small farms and farmers in North Dakota to assist North Dakota State University Extension in defining their needs for programming development. We found that nearly 45% of small farmer respondents are women. Small farmers prefer to access information for their operations in a variety of ways but like to engage with Extension through more direct and personal means. Recommendations include developing programming targeted at female farmers and organizing Extension information resources targeted at small farm needs, specifically.

FLT3L-Fc is a half-life extended, effectorless Fc-fusion of the native human FLT3-ligand. In cynomolgus monkeys, treatment with FLT3L-Fc leads to a complex pharmacokinetic/pharmacodynamic (PK/PD) relationship, with observed nonlinear PK and expansion of different immune cell types across different dose levels. A minimal physiologically based PK/PD model with expansion-enhanced target-mediated drug disposition (TMDD) was developed to integrate the molecule’s mechanism of action, as well as the complex preclinical and clinical PK/PD data, to support the preclinical-to-clinical translation of FLT3L-Fc. In addition to the preclinical PK data of FLT3L-Fc in cynomolgus monkeys, clinical PK and PD data from other FLT3-agonist molecules (GS-3583 and CDX-301) were used to inform the model and project the expansion profiles of conventional DC1s (cDC1s) and total DCs in peripheral blood. This work constitutes an essential part of our model-informed drug development (MIDD) strategy for clinical development of FLT3L-Fc by projecting PK/PD in healthy volunteers, determining the first-in-human (FIH) dose, and informing the efficacious dose in clinical settings. Model-generated results were incorporated in regulatory filings to support the rationale for the FIH dose selection.

Historically, the Y chromosome has presented challenges to classical methodology and philosophy of understanding the differences between males and females. A genetic unsolved puzzle, the Y chromosome was the last chromosome to be fully sequenced. With the advent of the Human Genome Project came a realization that the human genome is more than just genes encoding proteins, and an entire universe of RNA was discovered. This dark matter of biology and the black box surrounding the Y chromosome have collided over the last few years, as increasing numbers of non-coding RNAs have been identified across the length of the Y chromosome, many of which have played significant roles in disease. In this review, we will uncover what is known about the connections between the Y chromosome and the non-coding RNA universe that originates from it, particularly as it relates to long non-coding RNAs, microRNAs and circular RNAs.

Summary: Single-cell whole-genome sequencing (scWGS) enables the assessment of genome-level molecular differences between individual cells with particular relevance to genetically diverse systems like solid tumors. The application of scWGS was limited due to a dearth of accessible platforms capable of producing high-throughput profiles. We present a technique that leverages nucleosome disruption methodologies with the widely adopted 10× Genomics ATAC-seq workflow to produce scWGS profiles for high-throughput copy-number analysis without new equipment or custom reagents. We further demonstrate the use of commercially available indexed transposase complexes from ScaleBio for sample multiplexing, reducing the per-sample preparation costs. Finally, we demonstrate that sequential indexed tagmentation with an intervening nucleosome disruption step allows for the generation of both ATAC and WGS data from the same cell, producing comparable data to the unimodal assays. By exclusively utilizing accessible commercial reagents, we anticipate that these scWGS and scWGS+ATAC methods can be broadly adopted by the research community. Motivation: Single-cell whole-genome sequencing (scWGS) is a powerful tool for studying complex, heterogeneous biology. The motivation for this study was to establish an scWGS method that relies only on commercially available reagents and instrumentation to make the technology accessible to the widest possible segment of the research community.

Utilizing insects in legal investigations as a tool for estimating forensically important timelines (e.g., minimum post-mortem interval (min-PMI)) is becoming more commonly used and accepted throughout the world. In the United States much of the climate is temperate, however, the Sonoran Desert is an arid location with extreme heat and irregular rainfall. Work on forensically relevant insects in this region is severely understudied. This study surveyed the populations of forensically important blow flies (Diptera: Calliphoridae) in Phoenix, Arizona for one year using traps baited with four different food sources. Nine species across four genera were collected with Lucilia sericata, Calliphora latifrons, and Lucilia mexicana accounting for 98.6% of total blow flies captured in the baited traps. Abundance drastically changed throughout the year, ranging from 500+ flies to 0 flies captured in a month, with species abundance correlating with temperature and humidity. These results reveal that environmental conditions (i.e., maximum temperature and relative humidity) may limit blow fly activity or seasonally remove (or make inactive) entire local populations, thus affecting their ability to colonize remains and produce an accurate min-PMI.

A 65-year-old male was admitted for cardiogenic shock (ejection fraction: 15%) with severe aortic stenosis and regurgitation. He underwent emergency angiography and mechanical circulatory support. A multidisciplinary heart team discussed treatment options. Ultimately, he underwent successful emergency surgical aortic valve replacement with recovery on extracorporeal membrane oxygenation. (Level of Difficulty: Intermediate.)

Abstract Deep-sea mining of hydrothermal deposits off the coast of Japan is currently under consideration, and environmental baseline studies of the area are required to understand possible impacts. The aim of this study is to clarify population structures of dominant benthic megafaunal species near hydrothermal vent fields in the Okinawa Trough, using a population genetics approach. We examined dominant deep-sea scavenging species including eels, several amphipods, and a decapod and performed population genetic analyses based on the mitochondrial cytochrome c oxidase subunit I region. Several sites were sampled within Okinawa Trough to examine intra-population diversity while two other locations 1400–2400 km away were chosen for inter-population comparisons. For synaphobranchid eels Simenchelys parasitica and Synaphobranchus kaupii, our results showed significant intra-population diversity but no inter-population genetic differentiation, suggesting strong genetic connectivity and/or large population sizes. In addition, single nucleotide polymorphism analysis also confirmed strong genetic connectivity for Simenchelys parasitica. Among scavenging amphipods, we detected seven putative species using molecular phylogenetic analysis. We evaluated population structures of the most abundant species of amphipods and a decapod species (Nematocarcinus lanceopes). Our results provide basic information on the genetic population structures of benthic megafaunal species near hydrothermal vent fields, which can be used to select candidate species for future connectivity analysis with high-resolution genetic markers and aid understanding of the potential population impacts of environmental disturbances.

Integrated pest management (IPM) is an important component of golf course maintenance and includes conventional chemical pesticide use as well as nonchemical cultural management practices. Determining how frequent pest management practices are used on golf courses is critical when developing educational and outreach programs. The objective of this study was to determine the frequency of pest management practices and pesticide mixing and storage facilities on US golf courses. A survey was sent to 14,033 operational US golf facilities with 10% responding. Reliance on all conventional chemical pesticides increased from 2015 to 2021. The reliance on biological control products declined to 14% and reliance on the nonpesticide practice of using plant growth regulators remained equivalent to 2015. The most common pest management practices included monitoring weather patterns and scouting for pests, with 93% of golf facilities reporting the use of both. The use of written IPM and pesticide application plans increased from 44% to 63% of golf facilities between 2015 and 2021, respectively. Generally, mixing and storage facilities remained unchanged from 2015 to 2021. US golf facilities continue to use nonchemical pest management practices, but reliance on chemical pesticides has increased.

Nutrient use on United States golf courses increases management costs and has the potential to influence ecosystems. Therefore, it is critical to assess nutrient use and management practices to develop and teach best management practices. The objectives of this survey were to measure nutrient use and management practices on United States golf courses in 2021, and to determine if changes occurred since 2006. A survey was developed and distributed via e-mail to 14,033 United States golf facilities, with 1444 responding. From 2006 to 2021, the total projected nitrogen (N), available phosphorus (P2O5), and soluble potash (K2O) applied declined by 41%, 59%, and 54%, to 54,376, 13,761, and 41,386 tons, respectively. These reductions were attributed to course closures, reduced fertilized acres, reduced application rates, and nutrient use restrictions. The percentage of facilities that did not apply P2O5 increased to 21%, which is likely a result of P2O5 application restrictions. Soil testing was associated with greater application rates of N, P2O5, and K2O. Returning clippings, using precision fertilizer applications, reducing turfgrass acreage, and considering N release from soil organic matter were associated with reduced application rates of P2O5. Golf course superintendents have contributed to nationwide reductions in N, P2O5, and K2O, as evidenced by the reduction in fertilized acres and the reduction in nutrient use rates from 2006 to 2021.

The family Polychrotidae Fitzinger, 1843 is represented in Honduras by a single species, Polychrus gutturosus Berthold, 1845. This canopy dweller is distributed in the lowland moist forests and riparian forest within pine savannah of the northern and eastern regions of Honduras. Only 13 records and nine localities support the presence of the species in the country; therefore, the distribution and natural history of the species in Honduras is essentially unknown. Herein, we provide a new locality and natural history observations of a specimen captured in the core zone of the Reserva del Hombre y La Biosfera del Río Plátano. This record represents the north-western most occurrence of Polychrus gutturosus in a region known as the Mosquitia and fills an important distributional gap for this poorly known species.

Castor (Ricinus communis L.) is an important industrial crop with a wide range of industrial and pharmaceutical applications. Brazil is among the largest castor-producing countries. Between 2004 and 2010, castor cultivation was stimulated with an emphasis towards biodiesel production. However, this was not enough to leverage the production of castor in Brazil, mainly due to the lack of structured trade and the competition with other cheaper raw materials for the production of biodiesel. Despite this failure, the species presents itself as an excellent alternative for crop rotation in the second crop among soybean, corn, beans, and cotton cultivation areas as the oil is highly valuable for other products. Moreover, it has drawn the attention of producers and researchers in Brazil for this potential rotation as it is considered a plant tolerant of water-deficiency and is highly susceptible to gray mold, a disease favored by high humidity in the final stages of the crop. For instance, its cultivation in the second crop in Cerrado regions, where rains occur in the early stages of the crop and cease when the plants reach the final stage of production, has been successful and shows great promise. The current study aimed to evaluate the suitability of environments throughout Brazil to grow castor, incorporating variables associated with the incidence of gray mold and confirm these findings based on existing castor trial data obtained from the literature. The site suitability analysis determined that 74.99 million hectares - 8.8% of Brazilian territory - are highly suitable for castor production during second harvest, mostly located in the Northeastern and Midwestern regions. These results are surprising since Brazil currently has around 7.8% (∼66.81 million hectares) of its territory occupied with agriculture (grains, fruits, vegetables, and perennial crops). The findings of this study provide a method to perform site suitability for crops using data associated with agronomic and disease characteristics, as is the case with gray mold that often results in significant losses in castor production. Also, this analysis provides evidence for the great potential of Brazil to increase castor production and meet the world demand for its oil through utilization of second-crop cultivation.

Golf facilities account for 2.3 million acres in the United States. Numerous turfgrass species are managed on US golf facilities, but golf facilities may change turfgrasses depending on numerous variables. Knowing which turfgrasses are grown and how turfgrass selection has changed would provide important information to scientists, turfgrass managers, and policymakers. The objective of this survey was to measure turfgrass use on US golf facilities in 2021 and to determine whether changes in turfgrass selection have occurred since 2005. A survey was developed and distributed via e-mail to 13,938 US golf facilities, with 1861 responding. From 2005 to 2021, the total projected area of maintained turfgrass on US golf facilities decreased by 14.2%, which was likely a result of course closures and maintenance operations. Nationally, bermudagrass (Cynodon sp.) and Kentucky bluegrass (Poa pratensis) remained the most common warm- and cool-season turfgrasses, respectively. The area of winter-overseeded turfgrass declined by 60% between 2005 and 2021. The percentage of golf facilities that used zoysiagrass (Zoysia sp.) and seashore paspalum (Paspalum vaginatum) increased depending on region and specific playing surface, albeit a pragmatically minor increase. In general, turfgrass selection on golf facilities in northern climates did not change, whereas turfgrass selection in southern climates favored a change from cool- to warm-season species, depending on the playing surface. Whether in historically cool-season or warm-season regions, it appears that many golf facilities are exploring alternatives to their traditional turfgrass species.

While suspended particles play many important roles in the marine environment, their concentrations are very small in the deep sea, making observation difficult with existing methods: water sampling, optical sensors, and special imaging systems. Methods are needed to fill the lack of environmental baseline data in the deep sea, ones that are inexpensive, quick, and intuitive. In this study we applied object detection using deep learning to evaluate the variability of suspended particle abundance from images taken by a common stationary camera, “Edokko Mark 1”. Images were taken in a deep-sea seamount in the Northwest Pacific Ocean for approximately one month. Using the particles in images as training data, an object detection algorithm YOLOv5 was used to construct a suspended particle detection model. The resulting model successfully detected particles in the image with high accuracy (AP50 > 85% and F1 Score > 82%). Similarly high accuracy for a site not used for model training suggests that model detection accuracy was not dependent on one specific shooting condition. During the observation period, the world’s first cobalt-rich ferromanganese crusts excavation test was conducted, providing an ideal situation to test this model’s ability to measure changes in suspended particle concentrations in the deep sea. The time series showed relatively little variability in particle counts under natural conditions, but there were two turbidity events during/after the excavation, and there was a significant difference in numbers of suspended particles before and after the excavation. These results indicate that this method can be used to examine temporal variations both in small amounts of naturally occurring suspended particles and large abrupt changes such as mining impacts. A notable advantage of this method is that it allows for the possible use of existing imaging data and may be a new option for understanding temporal changes of the deep-sea environment without requiring the time and expense of acquiring new data from the deep sea.

Abstract Herbicide carryover injury to rotational crops can vary in severity depending on the influence of soil properties on herbicide bioavailability. Greenhouse bioassays were conducted with soybean, radish, and canola to evaluate differences in the bioavailability of three herbicides with carryover risk, atrazine, mesosulfuron‐methyl, and topramezone. Bioassays were conducted in three varying regional soil types with nine herbicide treatment rates including a control. Plant visual injury was evaluated weekly, and aboveground dry biomass was weighed after harvest of soybean 28 days after emergence (DAE) and radish and canola 21 DAE. A log‐logistic dose–response regression model was used to quantify herbicide‐effective concentrations for 30% (EC30), 50% (EC50), and 80% (EC80) visual injury and aboveground dry biomass reduction in each soil type. Relative herbicide‐soil bioavailability was determined through comparisons of herbicide‐effective concentrations among soil types. Pearson correlation revealed that atrazine, mesosulfuron‐methyl, and topramezone EC30 for all species were positively correlated to soil organic matter (OM) content (r = 0.56, 0.48, and 0.40, respectively) and cation exchange capacity (CEC) (r = 0.43, 0.41, and 0.45). Topramezone EC80 for soybean and radish was positively correlated to soil clay content (r = 0.51) and silt content (r = 0.51) and negatively correlated to sand content (r = −0.51) and pH (r = −0.52). Decreased atrazine, mesosulfuron‐methyl, and topramezone bioavailability in soil with high OM and CEC, decreased topramezone bioavailability in coarse‐textured soil and at high soil pH, and differential herbicide sensitivity of crop species can inform grower decisions on herbicide selections and rotational crop plans.

In the mostly pristine Congo Basin, agricultural land-use change has intensified in recent years. One potential and understudied consequence of this deforestation and conversion to agriculture is the mobilization and loss of organic matter from soils to rivers as dissolved organic matter. Here, we quantify and characterize dissolved organic matter sampled from 19 catchments of varying deforestation extent near Lake Kivu over a two-week period during the wet season. Dissolved organic carbon from deforested, agriculturally-dominated catchments was older (14C age: ~1.5kyr) and more biolabile than from pristine forest catchments. Ultrahigh-resolution mass spectrometry revealed that this aged organic matter from deforested catchments was energy-rich and chemodiverse, with higher proportions of nitrogen- and sulfur-containing formulae. Given the molecular composition and biolability, we suggest that organic matter from deforested landscapes is preferentially respired upon disturbance, resulting in elevated in-stream concentrations of carbon dioxide. We estimate that while deforestation reduces the overall flux of dissolved organic carbon by ~56%, it does not significantly change the yield of biolabile dissolved organic carbon. Ultimately, the exposure of deeper soil horizons through deforestation and agricultural expansion releases old, previously stable, and biolabile soil organic carbon into the modern carbon cycle via the aquatic pathway.

Introduction and objective The Interdisciplinary Cardiac Arrest Research Review (ICARE) group was formed in 2018 to conduct an annual search of peer-reviewed literature relevant to cardiac arrest. Now in its third year, the goals of the review are to illustrate best practices in research and help reduce compartmentalization of knowledge by disseminating relevant advances in the interdisciplinary world of cardiac arrest research. This iteration focuses on pharmacology and basic and translational science contributions. Review methods A search was conducted of PubMed using keywords related to cardiac arrest. Titles and abstracts were screened for relevance with a focus on basic science and pharmacology. Screened manuscripts underwent standardized scoring of methodological quality and impact on the respective fields by reviewer teams lead by a subject matter expert editor. Articles scoring higher than 99 percentiles by category were selected for full critique. Systematic differences between editors’ and reviewers’ scores were assessed using Wilcoxon signed-rank test. Brief description of the state of knowledge The top scoring studies centered around attempts at improving neurologic outcome through improved blood flow and reduction of metabolic demand in order to reduce the impact of hypoxia during resuscitation on the brain. Summary The sheer number of articles screened is a testament to the need for an accessible source highlighting highquality and important research. Several high-quality systematic reviews and original research studies have provided a physiologic basis for the treatment of cardiac arrest, and make the case for focused progression of several pharmacologic treatments to larger animal and human trials.

Background: Eponyms are ubiquitous in dermatology; however, their usage trends have not been studied. Objective: To characterize the usage of eponyms in dermatology from 1880 to 2020. Methods: Candidate eponyms were collected from a textbook and an online resource. A subset of these eponyms was deemed to be dermatology-focused by a panel of experienced dermatologists. Python scripts were used to permute eponyms into multiple variations and automatically search PubMed using BioPython’s Entrez library. Results: The dermatologist panel designated 373 of 529 candidate eponyms as dermatology-focused. These eponyms were permuted into 3159 variations and searched in PubMed. The highest occurring dermatology-focused eponyms (DFEs) in the year 2020 included Leishmania, Behçet syndrome, Kaposi sarcoma, Langerhans cell histiocytosis, and Mohs surgery. Increased DFE usage in the general medical literature parallels the overall increase in the use of other eponyms in the medical literature. However, in the most cited dermatology journals, DFE usage did not increase in the past decade. There were several eponyms with decreased usage. Limitations: This study is limited to the publications in PubMed; only titles and abstracts could be queried. Conclusion: DFEs are increasing in usage in the general medical literature, but the usage of eponyms in the most cited dermatology journals has plateaued.