205 results on '"Savarimuthu S"'
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52. An in-silico approach to identify the potential hot spots in SARS-CoV-2 spike RBD to block the interaction with ACE2 receptor.
- Author
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Stalin A, Lin D, Senthamarai Kannan B, Feng Y, Wang Y, Zhao W, Ignacimuthu S, Wei DQ, and Chen Y
- Subjects
- Alanine, Amino Acids metabolism, Binding Sites, COVID-19 Vaccines, Humans, Luteolin, Peptidyl-Dipeptidase A chemistry, Protein Binding, Spike Glycoprotein, Coronavirus chemistry, Spike Glycoprotein, Coronavirus genetics, Spike Glycoprotein, Coronavirus metabolism, Angiotensin-Converting Enzyme 2 metabolism, SARS-CoV-2, COVID-19 Drug Treatment
- Abstract
A novel acute viral pneumonia induced by SARS-CoV-2 exploded at the end of 2019, causing a severe medical and economic crisis. For developing specific pharmacotherapy against SARS-CoV-2, an in silico virtual screening was developed for the available in-house molecules. The conserved domain analysis was performed to identify the highly conserved and exposed amino acid regions in the SARS-CoV-2-S RBD sites. The Protein-Protein interaction analyses demonstrated the higher affinity between the SARS-CoV-2-S and ACE2 due to varieties of significant interactions between them. The computational alanine scanning mutation study has recognized the highly stabilized amino acids in the SARS-CoV-2-S RBD/ACE2 complex. The cumulative sequence investigations have inferred that Lys417, Phe486, Asn487, Tyr489, and Gln493 are perhaps the iconic target amino acids to develop a drug molecule or vaccine against SARS-CoV-2 infection. Most of the selected compounds include luteolin, zhebeirine, 3-dehydroverticine, embelin, andrographolide, ophiopogonin D, crocin-1, sprengerinin A, B, C, peimine, etc. were exhibited distinguish drug actions through the strong hydrogen bonding with the hot spots of the RBD. Besides, the 100 ns molecular dynamics simulation and free energy binding analysis showed the significant efficacy of luteolin to inhibit the infection of SARS-CoV-2. Highlights:Highly conserved and exposed amino acids in the SARS-CoV-2-S-RBD sites has been identifiedComputational alanine scanning mutation study has recognized the highly stabilized hot spots in the SARS-CoV-2-S RBD/ACE2 complex.Virtual screening has been executed to identify the drug actions in the RBD regionMost of the selected natural products were involved in the distinctive strong interactions with hot spots of RBD to inhibit the infection of SARS-CoV-2.[Formula: see text] Communicated by Ramaswamy H. Sarma.
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- 2022
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53. Bio-efficacy of Soil Actinomycetes and an Isolated Molecule 1,2-Benzenedicarboxylic Acid from Nonomuraea sp. Against Culex quinquefasciatus Say and Aedes aegypti L. Mosquitoes (Diptera: Culicidae).
- Author
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Saravana Kumar P, Reegan AD, Rajakumari K, Asharaja AC, Balakrishna K, and Ignacimuthu S
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- Actinomyces, Animals, Biological Control Agents analysis, Biological Control Agents pharmacology, Larva, Mosquito Vectors, Plant Extracts chemistry, Plant Leaves chemistry, Soil, Actinobacteria, Aedes, Anopheles, Culex, Insecticides chemistry
- Abstract
Vector-borne diseases such as filariasis and dengue that contribute significantly to disease burden, death, poverty, and social frailty are still a major public healthcare problem worldwide. Currently, synthetic chemicals have been used in mosquito control programs. However, repeated use of chemical insecticides causes environmental pollution and harmful effects on non-target organisms. Therefore, alternative ecofriendly sources from biological source are urgently needed to manage mosquitoes. In this respect, the present study was aimed to evaluate mosquito larvicidal and pupicidal activities of 22 crude extracts of soil actinomycetes on Culex quinquefasciatus and Aedes aegypti and to identify the active molecule. Briefly, the crude ethyl acetate extract and fractions were tested at 62.5, 125, 250, and 500 ppm and 2.5, 5.0, 7.5, and 10.0 ppm concentrations on larval and pupal stages of Cx. quinquefasciatus and Ae. aegypti. The larval and pupal mortality was assessed after 24 h of treatment. Among the 22 isolates screened, Nonomuraea sp. VAS-16 exhibited significant larvicidal and pupicidal activities against the tested mosquito species. Among the 18 fractions screened, fraction-6 showed strong larvicidal and pupicidal activities with the LC
50 and LC90 values of 9.1, 18.7, 9.82, and 22.85 ppm against the larvae and LC50 and LC90 values of 10.5, 23.1, 12.3, and 24.13 ppm against the pupae of Cx. quinquefasciatus and Ae. aegypti, respectively. Fascinatingly, the isolated compound 1,2-benzenedicarboxylic acid from fraction-6 at 0.5, 1.0, 1.5, and 2.0 ppm concentration recorded lower LC50 and LC90 values of 4.27, 14.90, 4.67, and 11.90 ppm against the larvae and LC50 and LC90 values of 4.58, 12.06, 5.36, and 13.07 ppm against the pupae of Cx. quinquefasciatus and Ae. aegypti, respectively. On the other hand, the compound recorded less ovicidal activity of 11.0% and 10.3% at 2 ppm against the eggs of Cx. quinquefasciatus and Ae. aegypti, respectively. The present study clearly shows that the crude extract and the compound from Nonomuraea sp. VAS-16 can be used as an effective biopesticide in integrated mosquito management program., (© 2021. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.)- Published
- 2022
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54. The Anticancer Efficacy of Thiourea-Mediated Reduced Graphene Oxide Nanosheets against Human Colon Cancer Cells (HT-29).
- Author
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Vimalanathan B, Vijaya JJ, Mary BCJ, Ignacimuthu S, Daniel M, Jayavel R, Bououdina M, and Bellucci S
- Abstract
The current research focuses on the fabrication of water-soluble, reduced graphene oxide (rGO) employing thiourea (T) using a simple cost-effective method, and subsequently examining its anticancer characteristics. The cytotoxicity caused by graphene oxide (GO) and T-rGO is investigated in detail. Biological results reveal a concentration-dependent toxicity of GO and T-rGO in human colon cancer cells HT-29. A decrease in cell viability alongside DNA fragmentation is observed. Flow cytometry analysis confirms the cytotoxic effects. The novelty in this work is the use of raw graphite powder, and oxidants such as KMNO
4 , NaNO3 , and 98 percent H2 SO4 to produce graphene oxide by a modified Hummers method. This study demonstrates a simple and affordable procedure for utilising thiourea to fabricate a water-soluble reduced graphene oxide, which will be useful in a variety of biomedical applications.- Published
- 2022
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55. Mosquitocidal efficacy of embelin and its derivatives against Aedes aegypti L. and Culex quinquefasciatus Say. (Diptera: Culicidae) and computational analysis of acetylcholinesterase 1 (AChE1) inhibition.
- Author
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Stalin A, Daniel Reegan A, Rajiv Gandhi M, Saravanan RR, Balakrishna K, Hesham AE, Ignacimuthu S, and Zhang Y
- Subjects
- Acetylcholinesterase, Animals, Benzoquinones, Larva, Molecular Docking Simulation, Plant Extracts pharmacology, Aedes, Culex
- Abstract
Embelin was isolated from the chloroform extract of Embelia ribes (Burm.f.) fruits; its derivative compounds 6-bromoembelin and vilangin were prepared, and they were evaluated for mosquitocidal activities against the third instar larvae and pupae of Aedes aegypti L. and Culex quinquefasciatus Say. (Diptera: Culicidae). The concentrations used were 0.5, 1.0, 1.5, and 2.0 ppm. Embelin recorded LC
50 values of 5.79 and 5.54 ppm against the larvae of Ae. aegypti and Cx. quinquefasciatus, respectively. Similarly, the LC50 values of embelin were 10.23 and 6.93 ppm against the pupae of Ae. aegypti and Cx. quinquefasciatus, respectively. Of the two derivatives tested, vilangin showed the highest larvicidal activity with LC50 values of 1.38 and 1.28 ppm against the larvae of Ae. aegypti and Cx. quinquefasciatus, respectively. Similarly, the LC50 values of vilangin were 1.60 and 1.43 ppm against the pupae of Ae. aegypti and Cx. quinquefasciatus, respectively. The LC50 values of 6-bromoembelin were 3.30 and 2.83 ppm against the larvae and 4.40 and 4.30 ppm against the pupae of Ae. aegypti and Cx. quinquefasciatus, respectively. The histopathological results displayed significant damage on cuboidal cells of the midgut (CU) in vilangin treated larvae of Ae. aegypti and Cx. quinquefasciatus at a concentration of 2.0 ppm. Similarly, peritrophic membrane (PM) was completely impaired in vilangin-treated larvae of Cx. quinquefasciatus and midgut content (MC) was very low in vilangin-treated larvae of Cx. quinquefasciatus. In addition, molecular docking and molecular dynamics studies demonstrated the efficacy of vilangin on the inhibition of acetylcholinesterase (AChE1) in Ae. aegypti and Cx. quinquefasciatus. The present results suggest that vilangin could be used to develop a natural active product against mosquito larvae., (Copyright © 2022 Elsevier Ltd. All rights reserved.)- Published
- 2022
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56. Cardiac tamponade as the initial presentation of autoimmune polyglandular syndrome Type 2: a case report.
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Glick LR, Hodson DZ, Sharma S, and Savarimuthu S
- Abstract
Background: Cardiac tamponade is a rare but serious manifestation of autoimmune polyglandular syndrome Type 2 (APS 2). Patients often present with symptoms of thyroid dysfunction and adrenal insufficiency, but the insidious onset of the disease may lead to delayed diagnosis, which can progress rapidly to haemodynamic instability requiring urgent intervention., Case Summary: A 39-year-old previously healthy male was admitted with cardiac tamponade complicated by cardiac arrest requiring emergent pericardiocentesis. An extensive work up revealed primary adrenal insufficiency and Hashimoto's thyroiditis. His positive autoantibodies to thyroid peroxidase and 21-hydroxylase combined with rapid improvement with initiation of corticosteroids and levothyroxine confirmed a diagnosis of APS 2., Discussion: Although this disease is often difficult to diagnose given its vague symptoms, it should be considered in the differential diagnosis for young patients presenting with pericardial effusion or cardiac tamponade of unknown origin. Early diagnosis and management are critical and often result in rapid improvement after appropriate treatment., (© The Author(s) 2022. Published by Oxford University Press on behalf of European Society of Cardiology.)
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- 2022
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57. Computational analysis of single nucleotide polymorphisms (SNPs) in PPAR gamma associated with obesity, diabetes and cancer.
- Author
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Stalin A, Lin D, Josephine Princy J, Feng Y, Xiang H, Ignacimuthu S, and Chen Y
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- Humans, Polymorphism, Single Nucleotide, Diabetes Mellitus genetics, Neoplasms genetics, Obesity genetics, PPAR gamma genetics
- Abstract
The single nucleotide polymorphisms (SNPs) are the common genetic variations in human genomes and act as markers for molecular susceptibility of complex traits and diseases in humans. Amino acid variations in the non-synonymous SNPs (nsSNPs) in coding and non-coding regions affect the function/structure of the proteins. The Peroxisome proliferator-activated receptor gamma (PPARγ or PPARG) is a nuclear receptor that plays a significant role in lipid metabolism and insulin production and is associated with diabetes, obesity, and cancer. In this study, the PPARG sequence was retrieved from the NCBI database (dbSNP: NP_619726.2), and an analysis was done to predict the damaged/harmful mutated amino acids. We identified five mutated variants (C162S, R166W, Q286P, or Q314P and P467L), which were mostly expressed in cancer tissues and associated with insulin resistance and partial lipodystrophy. The identified mutations were induced, and the analysis of molecular dynamics simulation was established to determine the dynamic stability/flexibility of PPARG. The dynamic trajectories were analyzed by RMSD, RMSF, and Radius of Gyration (Rg) analysis; a vast difference was noticed in each of the protein structure when compared with the PPARG wild-type, and the mutations in PPARG impaired its functions, leading to more significant problems in humans.Communicated by Ramaswamy H. Sarma.
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- 2022
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58. Biogenic preparation of ZnO, CaO, and ZnO-CaO nanocomposites and its influence on agro-morphological characteristics of mung bean.
- Author
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Anand KV, Keerthika S, Vasantharaja R, Kannan M, Preetha S, Selvan SM, Chaturvedi S, and Govindaraju K
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- Spectroscopy, Fourier Transform Infrared, Nanocomposites chemistry, Nanoparticles chemistry, Vigna, Zinc Oxide chemistry
- Abstract
In this study, nanomaterials (ZnO and CaO) and ZnO-CaO nanocomposites (Zn
25 Ca75 O; Zn50 Ca50 O; Zn75 Ca25 O) were prepared using co-precipitation method and physico-chemically characterized by XRD, FT-IR, and SEM with EDAX analysis. The XRD pattern of ZnO nanomaterials exhibits hexagonal wurtzite structure and CaO nanomaterials exhibit face-centered cubic (FCC) structure whereas nanocomposites (Zn75 Ca25 O, Zn50 Ca50 O, Zn25 Ca75 O) exhibit both hexagonal phase of ZnO and cubic phase of CaO. The SEM images of ZnO-CaO nanocomposites show the well-distributed clusters composed of ZnO and CaO nanoparticles with most of the particles are spherical and some of the particles are rod- and cubic-like morphology. Furthermore, nanomaterials and nanocomposites were used as nano-seed priming agents to assess the seed germination and seedling growth parameters of mung beans. Among the nano-seed priming agents, 500 ppm concentration of the nanocomposite (Zn50 Ca50 O) showed significant enhancement of germination (100%) and shoot length (11.7 cm), root length (8.9 cm), and vigor index (1910) than other nanomaterials and nanocomposites., (© 2021. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)- Published
- 2022
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59. Antidiabetic with antilipidemic and antioxidant effects of flindersine by enhanced glucose uptake through GLUT4 translocation and PPARγ agonism in type 2 diabetic rats.
- Author
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Irudayaraj SS, Jincy J, Sunil C, Duraipandiyan V, Ignacimuthu S, Chandramohan G, and Packiam SM
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- Animals, Antioxidants chemistry, Antioxidants pharmacology, Blood Glucose drug effects, Catalase, Diabetes Mellitus, Experimental, Diet, High-Fat adverse effects, Dose-Response Relationship, Drug, Gene Expression Regulation drug effects, Glucose metabolism, Glucose Transporter Type 4 genetics, Glutathione Peroxidase, Heterocyclic Compounds, 3-Ring administration & dosage, Heterocyclic Compounds, 3-Ring chemistry, Hypoglycemic Agents chemistry, Hypolipidemic Agents chemistry, Hypolipidemic Agents pharmacology, Male, Molecular Structure, PPAR gamma genetics, PPAR gamma metabolism, Phytotherapy, Plant Extracts chemistry, Plant Extracts pharmacology, Rats, Rats, Wistar, Rutaceae chemistry, Superoxide Dismutase, Diabetes Mellitus, Type 2 chemically induced, Diabetes Mellitus, Type 2 drug therapy, Glucose Transporter Type 4 metabolism, Heterocyclic Compounds, 3-Ring pharmacology, Hypoglycemic Agents pharmacology, PPAR gamma agonists
- Abstract
Ethnopharmacological Relevance: Medicinal plants have been used by the people of developing countries to treat various diseases. WHO also recommends the use of medicines from plants source. In that, diabetes also one of the diseases that have been treated traditionally by several people all over the world. In India, Toddalia asiatica (L.) Lam. (Rutaceae) is also a medicinal plant used traditionally for the treatment of diabetes in Ayurveda. Moreover, T. asiatica is also used in a polyherbal formulation to treat diabetes., Aim of the Study: This study examined the antidiabetic with antilipidemic and antioxidant effects of flindersine isolated from T. asiatica leaves., Materials and Methods: Diabetes was induced in Wistar rats by feeding a high-fat diet (HFD) for 15 days and injecting a single dose of 40 mg/kg b. wt. of Streptozotocin (STZ). Five days post-injection, the grouped diabetic rats were treated with 20 and 40 mg/kg of flindersine., Results: Flindersine resulted in a clear decline of blood glucose levels during 28 days of treatment in two different doses. Flindersine also significantly (P ≤ 0.05; P ≤ 0.005) reduced the body weight gain, plasma insulin concentration, urea, creatinine, total cholesterol (TC), triglycerides (TG) and free fatty acids (FFA) levels and significantly increased (P ≤ 0.05; P ≤ 0.005) the total protein level, superoxide dismutase (SOD), catalase (CAT) and glutathione peroxidase (GPx) activities compared to the standard drug, pioglitazone. Additionally, flindersine restored the glucose transporter protein 4 (GLUT4), adenosine monophosphate protein kinase (AMPK) and peroxisome proliferator-activated receptor γ (PPARγ) expressions in adipose tissues and skeletal muscles., Conclusion: It has been found that flindersine has potent antilipidemic and antidiabetic activities by improving insulin sensitivity by enhancing the phosphorylation of AMPK, GLUT4 translocation, and PPARγ agonism on adipose tissue and skeletal muscles of diabetic rats., (Copyright © 2021 Elsevier B.V. All rights reserved.)
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- 2022
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60. The role of sodium-glucose co-transporter 2 protein inhibitors in heart failure: more than an antidiabetic drug?
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Savarimuthu S and Harky A
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- Community Support, Glucose, Humans, Hypoglycemic Agents therapeutic use, Quality of Life, Sodium, Stroke Volume, Diabetes Mellitus, Type 2 complications, Diabetes Mellitus, Type 2 drug therapy, Heart Failure drug therapy, Sodium-Glucose Transporter 2 Inhibitors therapeutic use, Symporters
- Abstract
Introduction: Heart failure (HF) places a great burden on both the patient and on medical facilities worldwide, with admission due to worsening HF being one of the leading causes of hospitalization. Optimizing HF in the community remains a challenge, but with appropriate medications, specialist review, and community support, the number of hospital admissions could be reduced. Sodium glucose co-transporter protein 2 (SGLT2) inhibitors have been shown to play a role in patients with heart failure and reduce adverse cardiovascular outcomes. This article seeks to investigate the existing medical literature to understand the role of SGLT2 inhibitors in patients with heart failure with reduced ejection fraction (HFrEF)., Areas Covered: An electronic search was undertaken looking at recent literature studying the outcomes of SGLT2 inhibitors on patients with heart failure. No limits were placed on the timing of the publications or the type of article. Keywords and MeSH terms were used, and the results were summarized in the relevant section., Expert Opinion: This study shows that SGLT2 inhibitors are a safe and effective medication in the setting of HFrEF and has been shown to reduce symptoms of heart failure thus improving quality of life and reducing admissions due to heart failure and cardiovascular mortality.
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- 2022
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61. Prognostic value of the Quick Sepsis-related Organ Failure Assessment (qSOFA) score among critically ill medical and surgical patients with suspected infection in a resource-limited setting.
- Author
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Bishop LA, Wilson DPK, Wise RD, Savarimuthu SM, and Anesi GL
- Abstract
Background: The Quick Sequential Organ Failure Assessment (qSOFA) score is a simple bedside tool validated outside of the intensive care unit (ICU) to identify patients with suspected infection who are at risk for poor outcomes., Objectives: To assess qSOFA at the time of ICU referral as a mortality prognosticator in adult medical v. surgical patients with suspected infection admitted to an ICU in a resource-limited regional hospital in South Africa (SA)., Methods: We conducted a retrospective cohort study on adult medical or surgical patients that were admitted to an ICU in a resource-limited hospital in SA. We performed univariate and multivariable logistic regression and compared nested models using likelihood ratio test, and we calculated the area under the receiver operating characteristic curve (AUROC)., Results: We recruited a total of 1 162 (medical n=283 and surgical n=875) participants in the study who were admitted to the ICU with suspected infection. qSOFA at the time of ICU referral was highly associated with but poorly discriminant of in-ICU mortality among medical (odds ratio (OR) 2.60, 95% confidence interval (CI) 1.19 - 5.71; p=0.02; AUROC 0.60; 95% CI 0.53 - 0.67; p=0.02) and surgical (OR 2.74; 95% CI 1.73-4.36; p<0.001; AUROC 0.60; 95% CI 0.55 - 0.65; p=0.04) patients. qSOFA model performance was similar between medical and surgical subgroups (p≥0.26). Addition of qSOFA to a baseline risk factor model including age, sex, and HIV status improved the model discrimination in both subgroups (medical AUROC 0.64; 95% CI 0.56 - 0.71; p=0.049; surgical AUROC 0.69; 95% CI 0.64 - 0.74; p<0.0001)., Conclusion: qSOFA was highly associated with, but poorly discriminant for, poor outcomes among medical and surgical patients with suspected infection admitted to the ICU in a resource-limited setting. These findings suggest that qSOFA may be useful as a tool to identify patients at increased risk of mortality in these populations and in this context., Competing Interests: Conflicts of interest: GLA reports receiving fees from UpToDate and for expert witness consulting.
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- 2021
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62. Effect of monoterpene ester from Blumea axillaris (Lam.) DC and its acetyl derivative against plant pathogenic fungi and their in silico molecular docking.
- Author
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Sivanandhan S, Pathalam G, Antony S, Michael GP, Balakrishna K, Boovaragamurthy A, Shirota O, Alwahibi MS, El-Shikh MS, and Ignacimuthu S
- Subjects
- Antifungal Agents pharmacology, Esters, Fungi, Molecular Docking Simulation, Monoterpenes pharmacology, Plant Diseases, Asteraceae, Fusarium
- Abstract
The present study was aimed to isolate active constituents from Blumea axillaris (Lam.) DC (Asteraceae) against phytopathogenic fungi. Bioactivity guided fractionation of the successive n -hexane, chloroform and methanol extract led to the isolation of the monoterpene ester (4 R ,5 S )-4-hydroxy-7-tigloyloxycarvotanacetone (1). The compound 1 was converted into acetyl derivative (2). The acetyl derivative (2) and the parent compound 1 were tested again phytopathogenic fungi by using mycelial inhibition and minimal inhibitory concentration values were found out by the broth microdilution method. The acetyl derivative (2) showed the highest antifungal activity against Rhizoctonia solani and Aspergillus niger . Based upon in vitro results, compound 1 was tested against Fusarium oxyporum (wilting disease) and compound 2 was tested against R. solani (leaf blight disease) in vivo using the foliar spray method. Both compounds had no phytotoxicity and also in silico docking study showed that both compounds were binding similarly as commercial fungicide carbendazim.
- Published
- 2021
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63. Management of phosphorus nutrient amid climate change for sustainable agriculture.
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Maharajan T, Ceasar SA, Krishna TPA, and Ignacimuthu S
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- Agriculture, Crops, Agricultural, Nutrients, Climate Change, Phosphorus
- Abstract
Nutrients are essential for plant growth and development and influence overall agricultural production. Phosphorus (P) is a major nutrient required for many physiological and biochemical functions of a plant. Phosphate rock is the major source of phosphate fertilizer but is becoming increasingly limited in both developing and developed countries. The resources of phosphate rock need to be conserved, and import dependency on phosphate fertilizer needs to be minimized; this will help increase the availability of phosphate fertilizer over the next 300 yr. Climate change creates new challenges in the management of nutrients including P, affecting the overall production of crops. The availability, acquisition, and translocation of P are influenced by the fluctuation of temperatures, pH, drought, and elevated CO
2 . Both lower and higher soil temperatures reduce uptake and translocation of P. High soil pH affects P concentration and decreases the rate of plant P uptake. Low soil pH decreases the activity of soil microorganisms, the rate of transpiration, and P uptake and utilization. Elevated CO2 decreases P uptake from soil by the plants. Future research is needed on chemical, molecular, microbiological, and physiological aspects to improve the understanding on how temperature, pH, drought, and elevated CO2 affect the availability, acquisition, and transport of P by plants. Better P management strategies are required to secure the P supply to ensure long-term protection of soil fertility and to avoid environmental impacts such as eutrophication and water pollution, ensuring sustainable food production., (© 2021 The Authors. Journal of Environmental Quality © 2021 American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America.)- Published
- 2021
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64. Potential of CRISPR/Cas system in the diagnosis of COVID-19 infection.
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Hillary VE, Ignacimuthu S, and Ceasar SA
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- Communicable Diseases diagnosis, Communicable Diseases virology, Humans, Pandemics prevention & control, RNA, Viral genetics, COVID-19 diagnosis, COVID-19 virology, CRISPR-Cas Systems genetics, SARS-CoV-2 genetics
- Abstract
Introduction: Emerging novel infectious diseases and persistent pandemics with potential to destabilize normal life remain a public health concern for the whole world. The recent outbreak of pneumonia caused by Coronavirus infectious disease-2019 (COVID-19) resulted in high mortality due to a lack of effective drugs or vaccines. With a constantly increasing number of infections with mutated strains and deaths across the globe, rapid, affordable and specific detections with more accurate diagnosis and improved health treatments are needed to combat the spread of this novel pathogen COVID-19., Areas Covered: Researchers have started to utilize the recently invented clustered regularly interspaced short palindromic repeats (CRISPR) and CRISPR-associated proteins (CRISPR/Cas)-based tools for the rapid detection of novel COVID-19. In this review, we summarize the potential of CRISPR/Cas system for the diagnosis and enablement of efficient control of COVID-19., Expert Opinion: Multiple groups have demonstrated the potential of utilizing CRISPR-based diagnosis tools for the detection of SARS-CoV-2. In coming months, we expect more novel and rapid CRISPR-based kits for mass detection of COVID-19-infected persons within a fraction of a second. Therefore, we believe science will conquer COVID-19 in the near future.
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- 2021
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65. Synthesis and characterization of magnetite carbon nanocomposite from agro waste as chromium adsorbent for effluent treatment.
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Mohamed Khalith SB, Rishabb Anirud R, Ramalingam R, Karuppannan SK, Dowlath MJH, Pandion K, Ravindran B, WoongChang S, Ovi D, Arasu MV, Ignacimuthu S, Al-Dhabi NA, Chandrasekaran M, and Arunachalam KD
- Subjects
- Adsorption, Carbon, Chromium, Ecosystem, Ferrosoferric Oxide, Humans, Kinetics, Wastewater, Magnetite Nanoparticles, Nanocomposites, Water Pollutants, Chemical analysis
- Abstract
The waste water released from industries which contain pollutants like heavy metals, dyes and other toxic chemicals brings numerous harms to the ecosystem and humans. Nowadays the nanocomposites based technologies are effectively used for environmental remediation. In the present study, hexavalent chromium was removed from the industrial effluent using magnetite carbon nanocomposite. The nanocomposite composed of highly porous carbon and iron oxide nanoparticles prepared by using agrowastes (sugarcane bagasse and orange peel extract). Iron oxide nanoparticles (FeONPs) formation was confirmed by UV-visible spectroscopy; incorporation of magnetite with highly porous carbon was established by Fourier Transforms Infrared Spectroscopy and X-ray Diffraction Spectroscopy. Morphological features of magnetite nanoparticles and highly porous carbon were analyzed using Scanning Electron Microscope and Transmission Electron Microscope. Magnetic properties analyzed by Vibrating Sample Magnetometer revealed magnetite carbon nanocomposite exhibited better Ms value than highly porous carbon. The concentration of Cr
6+ in treated effluent was determined using Atomic Absorption Spectroscopy. Pseudo-second order equation fitted with kinetics and the Langmuir monolayer favors for isotherm. This study reveals efficiency in Cr6+ removal from effluent using magnetite carbon nanocomposites which extends their application in waste water treatment., (Copyright © 2021 Elsevier Inc. All rights reserved.)- Published
- 2021
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66. Subcutaneous implantable cardioverter defibrillator: Can it overtake its transvenous counterpart.
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Savarimuthu S, Roy S, Obeidat M, and Harky A
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- Equipment Design, Humans, Patient Selection, Secondary Prevention, Death, Sudden, Cardiac prevention & control, Defibrillators, Implantable, Prosthesis Implantation methods
- Abstract
Over the past decade, the emergence of the subcutaneous implantable cardioverter defibrillator (S-ICD) has provided cardiologists with an option to provide both primary or secondary prevention treatment of sudden cardiac death (SCD) without the associated risks that come with the use of intracardiac leads. S-ICD may prove to be a useful option in those who are young, have thromboembolic risk, immunodeficiency states, unfavorable anatomy due to adult congenital heart disease (ACHD). This article reviews the existing literature to determine whether S-ICD can prove to be a safe alternative in comparison to Transvenous implantable cardioverter defibrillator (TV-ICD) and in which patient population should S-ICD be considered over TV-ICD., (© 2021 Wiley Periodicals LLC.)
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- 2021
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67. Larvicidal and ovicidal activities of phenyl acetic acid isolated from Streptomyces collinus against Culex quinquefasciatus Say and Aedes aegypti L. (Diptera: Culicidae).
- Author
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Reegan AD, Kumar PS, Asharaja AC, Devi C, Jameela S, Balakrishna K, and Ignacimuthu S
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- Analysis of Variance, Animals, Biological Assay, Esterases antagonists & inhibitors, Glutathione Transferase antagonists & inhibitors, India, Larva drug effects, Lethal Dose 50, Ovum drug effects, Aedes drug effects, Aedes enzymology, Aedes growth & development, Culex drug effects, Culex enzymology, Culex growth & development, Phenylacetates chemistry, Phenylacetates isolation & purification, Phenylacetates pharmacology, Streptomyces chemistry
- Abstract
The bio-efficacy of crude ethyl acetate extract, fractions and a compound phenyl acetic acid from the ethyl acetate extract of Streptomyces collinus was evaluated on Culex quinquefasciatus Say and Aedes aegypti L. mosquitoes (Diptera: Culicidae). The larvae were exposed to concentrations of 2.5, 5.0, 7.5 and 10.0 ppm for fractions and 0.5, 1.0, 1.5 and 2.0 ppm for compound. After 24 h, the larval mortality was assessed and the LC₅₀ and LC
90 values were calculated. Similarly, per cent ovicidal activity was calculated for eggs after 120 h post treatment for phenyl acetic acid. Among the eleven fractions screened, fraction 7 from the ethyl acetate extract of Streptomyces collinus exhibited good larvicidal activity against both mosquito species. The LC50 and LC90 values of fraction 7 were 4.42, 6.23 ppm against Cx. quinquefasciatus larvae and 5.13, 14.51 ppm against Ae. aegypti larvae, respectively. Further, the isolated compound, phenyl acetic acid from fraction 7 recorded 100% larvicidal activity at 2 ppm concentration with LC50 and LC90 values of 2.07, 4.87 ppm on Cx. quinquefasciatus larvae and 3.81, 9.87 ppm on Ae. aegypti larvae, respectively. Phenyl acetic acid presented 50.3% and 42.0% ovicidal activity against Cx. quinquefasciatus and Ae. aegypti eggs at 2 ppm concentration after 120 h post treatment. The compound, phenyl acetic acid could be used in mosquito control programme., (Copyright © 2021 Elsevier Inc. All rights reserved.)- Published
- 2021
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68. Hepatoprotective effect of selected isoandrographolide derivatives on steatotic HepG2 cells and High Fat Diet fed rats.
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Toppo E, Al-Dhabi NA, Sankar C, Kumar SN, Buvanesvaragurunathan K, Darvin SS, Stalin A, Balakrishna K, Ceasar SA, Pandikumar P, Ignacimuthu S, Sivasankaran K, and Agastian P
- Subjects
- Animals, Biomarkers blood, Cytoprotection, Diet, High-Fat, Disease Models, Animal, Diterpenes pharmacokinetics, Diterpenes toxicity, Gene Expression Regulation, Hep G2 Cells, Hepatocytes metabolism, Hepatocytes pathology, Humans, Lipids blood, Non-alcoholic Fatty Liver Disease blood, Non-alcoholic Fatty Liver Disease etiology, Non-alcoholic Fatty Liver Disease pathology, Rats, Wistar, Rats, Diterpenes pharmacology, Hepatocytes drug effects, Lipid Metabolism drug effects, Non-alcoholic Fatty Liver Disease prevention & control
- Abstract
Non-alcoholic Fatty Liver Disease (NAFLD) is one of the growing epidemics of the globe. This study was aimed to evaluate the anti-NAFLD effect of selected IAN derivatives using in silico, in vitro and in vivo models. In silico tools viz., DataWarrior, SwissADME and Gaussian 09 were used to predict the pharmacokinetic properties and electronic distribution patterns of the derivatives; docking analysis was done with Autodock against PPARα. Toxicities of the derivatives were assessed in HepG2 cells using MTT assay. Anti-NAFLD efficacies of the derivatives were assessed in free fatty acid induced steatotic HepG2 cells. In vivo anti-NAFLD effect of active isoandrographolide (IAN) derivative, 19-propionyl isoandrographolide (IAN-19P) was assessed in High Fat Diet fed rats. In silico and in vitro studies indicated that IAN-19P showed improved drug-likeness and drug score. The toxicity of IAN-19P to HepG2 cells was comparatively less than IAN and other derivatives. In free fatty acid induced steatotic HepG2 cells, treatment with IAN-19P significantly lowered intracellular triglyceride content and leakage of LDH and transaminases. Treating High Fat Diet fed animals with IAN-19P significantly lowered plasma lipids, transaminases, LDH and GGT levels. The treatment with IAN-19P upregulated the expressions of PPARα and CPT-1. IAN-19P did not produce any noticeable adverse effect till 2 g/kg concentration in acute and 250 mg/kg concentration in subacute toxicity studies. This study indicated the beneficial effect of IAN-19P for the treatment of NAFLD; however robust investigations are needed to establish the potential of IAN-19P to treat NAFLD., (Copyright © 2021 Elsevier B.V. All rights reserved.)
- Published
- 2021
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69. Friedelin exhibits antidiabetic effect in diabetic rats via modulation of glucose metabolism in liver and muscle.
- Author
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Sunil C, Irudayaraj SS, Duraipandiyan V, Alrashood ST, Alharbi SA, and Ignacimuthu S
- Subjects
- Animals, Diabetes Mellitus, Experimental metabolism, Dose-Response Relationship, Drug, Drugs, Chinese Herbal isolation & purification, Drugs, Chinese Herbal pharmacology, Drugs, Chinese Herbal therapeutic use, Glucose metabolism, Hypoglycemic Agents isolation & purification, Hypoglycemic Agents pharmacology, Liver metabolism, Male, Muscle, Skeletal metabolism, Rats, Rats, Wistar, Triterpenes isolation & purification, Triterpenes pharmacology, Diabetes Mellitus, Experimental drug therapy, Glucose antagonists & inhibitors, Hypoglycemic Agents therapeutic use, Liver drug effects, Muscle, Skeletal drug effects, Triterpenes therapeutic use
- Abstract
Ethnopharmacological Relevance: Demand for plant-based medications and therapeutics is increasing worldwide as of its potential effects and no toxic. Traditionally, so many medicinal plants are used to treat diabetes. Subsequently, investigation on medicinal plants was enduring to discover potential antidiabetic drugs. A. tetracantha is used traditionally to cure diabetes mellitus, cough, dropsy, chronic diarrhea, rheumatism, phthisis and smallpox. Scientifically, A. tetracantha has been reported as an antidiabetic agent. Friedelin, the isolated compound has been reported as hypolipidemic, antioxidant, scavenging of free radicals, antiulcer, anti-inflammatory, analgesic and antipyretic agent., Aim of the Study: To scrutinize the mechanism of antidiabetic activity of friedelin isolated from the leaves of A. tetracantha., Materials and Methods: A. tetracantha leaves powder (5 kg) was soaked in hexane (15 L) to obtain hexane extract. Using column chromatography, the hexane extract was fractionated using a combination of solvents like hexane and ethyl acetate. 25 fractions were obtained and the fractions 13 and 14 yielded the compound, friedelin. Friedelin at the doses of 20 and 40 mg/kg was used to treated STZ -induced diabetic rats for 28 days. Later 28 days of treatment, the bodyweight changes, levels of blood glucose, insulin, SGOT, SGPT, SALP, liver glycogen and total protein were assessed., Results: Friedelin significantly brought these altered levels to near normal. Moreover, friedelin also enhanced the translocation as well as activation of GLUT2 and GLUT4 through PI3K/p-Akt signaling cascade in skeletal muscles and liver on diabetic rats., Conclusion: This finding proved that friedelin has an anti-diabetic effect through insulin-dependent signaling cascade mechanism, thus it may lead to establishing a drug to treat type 2 diabetes mellitus., (Copyright © 2020 Elsevier B.V. All rights reserved.)
- Published
- 2021
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70. Left Atrial or Transeptal Approach for Mitral Valve Surgery: A Systematic Review and Meta-analysis.
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Harky A, Kusu-Orkar TE, Chan JSK, Noshirwani A, Savarimuthu S, Pousios D, and Muir AD
- Subjects
- Atrial Fibrillation surgery, Heart Atria surgery, Humans, Treatment Outcome, Cardiac Surgical Procedures, Heart Valve Diseases surgery, Heart Valve Prosthesis Implantation, Mitral Valve surgery
- Abstract
To compare outcomes of mitral valve surgery through conventional left atriotomy and transeptal approach (TS). Preferred Reporting Items for Systematic Reviews and Meta-Analyses guidelines were followed. Primary outcomes were operative mortality and permanent pacemaker (PPM) implantation; secondary outcomes were new onset of atrial fibrillation (AF), stroke and operative times. Sixteen articles met the inclusion criteria with 4537 patients. Cardiopulmonary bypass was longer with TS (weighted mean differences - 16.44 minutes [-29.53, -3.36], P = 0.01). Rates of PPM implantation (risk ratio 0.65 [0.47, 0.89], P = 0.007) and new onset AF (risk ratio 0.87 [0.78, 0.97], P = 0.02) were higher with TS. Subgroup analysis of isolated mitral valve surgery cohort showed no difference in operative times, mortality, new onset of AF, stroke, and PPM implantation. There is equal outcomes between both approaches during isolated mitral valve surgery; however, TS was associated with longer operative times and higher postoperative AF and PPM rates when pooling combined procedures. A large randomized controlled trial is required to confirm those findings., (Copyright © 2020 Elsevier Inc. All rights reserved.)
- Published
- 2021
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71. Karyomorphological effects of two new oil formulations on Helicoverpa armigera (Hübner) (Lepidoptera: Noctuidae).
- Author
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Pavunraj M, Baskar K, Arokiyaraj S, Ignacimuthu S, Alqarawi AA, and Hashem A
- Abstract
The cotton bollworm Helicoverpa armigera is a serious pest of many economically important crops. Since this pest has become resistant to the conventional synthetic insecticides, newer compounds and formulations are being developed against this insect pest. Many natural compounds isolated from the plants were tested against this pest. Among them Hyptis suaveolens and Melochia corchorifolia showed insecticidal properties against H. arnigera . Based on bioefficacy studies, caryophyllene and β-sitosterol were isolated from H. suaveolens and M. corchorifolia respectively. The isolated natural compounds were further developed as formulations in various combinations with neem ( Azadirachta indica ) and karanj ( Pongamia pinnata ) oils. The present study indicated that the formulations influenced the karyomorphology of H. armigera ., (© 2020 The Authors.)
- Published
- 2021
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72. Anther Culture in Jatropha curcas L.: A Tree Species.
- Author
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Arockiasamy S, Patil M, Yepuri V, Shrivastava V, Madan N, Hadole S, and Sarkar P
- Subjects
- Chromosomes, Plant genetics, Haploidy, Homozygote, Pollination genetics, Cell Culture Techniques methods, Flowers genetics, Jatropha genetics, Plant Breeding methods, Trees genetics
- Abstract
The obstacles to breeding programs in Jatropha are the long reproductive cycle with a juvenile phase that lasts several months, the highly heterozygous nature of the genome, the large canopy size, and self-incompatibility that is a long-term process which requires multiple cycles of self-pollination to achieve complete homozygosity. In vitro plant tissue culture-based tools such as haploids and doubled haploid techniques can increase the selection efficiency, resulting into selection of superior plants with complete homozygosity in one generation. It bypasses the complications of greenhouse field evaluation or off-season generation advancement, which takes about 8-10 generations in traditional breeding with the time line of 10-12 years. The haploids have in fact a single set of chromosomes, which undergoes duplication spontaneously during in vitro culture conditions, and are further converted into doubled haploid plants. This represents a major biotechnological tool to accelerate plant breeding. Here, we have established a reproducible, unique anther culture protocol in Jatropha curcas to develop haploid and doubled haploid plants., (© 2021. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.)
- Published
- 2021
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73. Raltegravir, Indinavir, Tipranavir, Dolutegravir, and Etravirine against main protease and RNA-dependent RNA polymerase of SARS-CoV-2: A molecular docking and drug repurposing approach.
- Author
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Indu P, Rameshkumar MR, Arunagirinathan N, Al-Dhabi NA, Valan Arasu M, and Ignacimuthu S
- Subjects
- Drug Repositioning, Heterocyclic Compounds, 3-Ring pharmacology, Humans, Indinavir pharmacology, Molecular Docking Simulation, Nitriles pharmacology, Oxazines pharmacology, Piperazines pharmacology, Pyridines pharmacology, Pyridones pharmacology, Pyrimidines pharmacology, Pyrones pharmacology, Raltegravir Potassium pharmacology, SARS-CoV-2 enzymology, Sulfonamides pharmacology, Antiviral Agents pharmacology, Coronavirus Protease Inhibitors pharmacology, RNA-Dependent RNA Polymerase antagonists & inhibitors, SARS-CoV-2 drug effects, COVID-19 Drug Treatment
- Abstract
Background: Outbreak of COVID-19 has been recognized as a global health concern since it causes high rates of morbidity and mortality. No specific antiviral drugs are available for the treatment of COVID-19 till date. Drug repurposing strategy helps to find out the drugs for COVID-19 treatment from existing FDA approved antiviral drugs. In this study, FDA approved small molecule antiviral drugs were repurposed against the major viral proteins of SARS-CoV-2., Methods: The 3D structures of FDA approved small molecule antiviral drugs were retrieved from PubChem. Virtual screening was performed to find out the lead antiviral drug molecules against main protease (Mpro) and RNA-dependent RNA polymerase (RdRp) using COVID-19 Docking Server. Furthermore, lead molecules were individually docked against protein targets using AutoDock 4.0.1 software and their drug-likeness and ADMET properties were evaluated., Results: Out of 65 FDA approved small molecule antiviral drugs screened, Raltegravir showed highest interaction energy value of -9 kcal/mol against Mpro of SARS-CoV-2 and Indinavir, Tipranavir, and Pibrentasvir exhibited a binding energy value of ≥-8 kcal/mol. Similarly Indinavir showed the highest binding energy of -11.5 kcal/mol against the target protein RdRp and Dolutegravir, Elbasvir, Tipranavir, Taltegravir, Grazoprevir, Daclatasvir, Glecaprevir, Ledipasvir, Pibrentasvir and Velpatasvir showed a binding energy value in range from -8 to -11.2 kcal/mol. The antiviral drugs Raltegravir, Indinavir, Tipranavir, Dolutegravir, and Etravirine also exhibited good bioavailability and drug-likeness properties., Conclusion: This study suggests that the screened small molecule antiviral drugs Raltegravir, Indinavir, Tipranavir, Dolutegravir, and Etravirine could serve as potential drugs for the treatment of COVID-19 with further validation studies., (Copyright © 2020 The Authors. Published by Elsevier Ltd.. All rights reserved.)
- Published
- 2020
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74. The need to manage the risk of thromboembolism in COVID-19 patients.
- Author
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Khan IH, Savarimuthu S, Leung MST, and Harky A
- Subjects
- Age Factors, Blood Coagulation immunology, COVID-19, Comorbidity, Coronavirus Infections diagnosis, Coronavirus Infections epidemiology, Coronavirus Infections virology, Cytokine Release Syndrome immunology, Cytokine Release Syndrome virology, Fibrin Fibrinogen Degradation Products analysis, Humans, Pandemics, Pneumonia, Viral diagnosis, Pneumonia, Viral epidemiology, Pneumonia, Viral virology, Risk Factors, SARS-CoV-2, Severity of Illness Index, Sex Factors, Thromboembolism blood, Thromboembolism diagnosis, Thromboembolism etiology, Anticoagulants administration & dosage, Betacoronavirus immunology, Coronavirus Infections complications, Cytokine Release Syndrome complications, Pneumonia, Viral complications, Thromboembolism prevention & control
- Abstract
COVID-19 first appeared in Wuhan, Hubei Province, China, in December 2019. Thought to be of zoonotic origin, it has been named SARS-CoV-2 (COVID-19) and has spread rapidly. As of April 20, 2020, there have been >2.4 million cases recorded worldwide. The inflammatory process, cytokine storm, and lung injury that are associated with COVID-19 can put patients at an increased risk of thrombosis. The total incidence of thrombotic events in COVID-19 patients is currently uncertain. Those with more severe disease and with other risk factors, including increasing age, male sex, obesity, cancer, comorbidities, and intensive care unit admission, are at higher risk of these events. However, there is little international guidance on managing these risks in COVID-19 patients. In this paper, we explore the current evidence and theories surrounding thrombosis in these unique patients and reflect on experience from our center., (Copyright © 2020 Society for Vascular Surgery. Published by Elsevier Inc. All rights reserved.)
- Published
- 2020
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75. Alcohol septal ablation: A useful tool in our arsenal against hypertrophic obstructive cardiomyopathy.
- Author
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Savarimuthu S and Harky A
- Subjects
- Female, Humans, Male, Patient Selection, Time Factors, Treatment Outcome, Cardiac Surgical Procedures methods, Cardiomyopathy, Hypertrophic surgery, Catheter Ablation methods, Ethanol therapeutic use, Heart Septum surgery
- Abstract
Objective: Affecting 1 in 500 individuals; hypertrophic cardiomyopathy is an autosomal dominant cardiovascular disorder which is prevalent throughout the world. Surgical myectomy (SM) and alcohol septal ablation (ASA) are two methods currently used for the management of drug refractory hypertrophic obstructive cardiomyopathy (HOCM). ASA may prove to be a useful, less invasive treatment in patients with HOCM METHODS: Electronic literature search was conducted to identify articles that discussed methods to treat drug refractory HOCM. No limits were placed on timing of the publication or the type of article. Keywords and MeSH terms were used and the results were summarized in the relevant section., Results: Current evidence suggests that alcohol septal ablation is a safe and effective procedure in treating patients with HOCM with similar short- and long-term outcomes when compared with SM., Conclusion: ASA has been shown to be a safe and reliable procedure; imaging techniques and dedicated multi-disciplinary teams can be used to select patients with HOCM. Though SM is recommended as gold standard treatment for drug refractory HOCM, ASA may play an increasing role in the near future due an ageing population; both ASA and SM can have a beneficial role in treating those who are affected by HOCM when the appropriate group of patients are selected for each intervention., (© 2020 Wiley Periodicals LLC.)
- Published
- 2020
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76. The role of ECMO in COVID-19: Can it provide rescue therapy in those who are critically ill?
- Author
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Savarimuthu S, BinSaeid J, and Harky A
- Subjects
- COVID-19, Critical Care methods, Critical Illness mortality, Extracorporeal Membrane Oxygenation adverse effects, Female, Humans, Intensive Care Units organization & administration, Male, Pandemics prevention & control, Patient Safety statistics & numerical data, Patient Selection, Risk Assessment, Role, Survival Analysis, Treatment Outcome, Coronavirus Infections epidemiology, Coronavirus Infections therapy, Critical Illness therapy, Extracorporeal Membrane Oxygenation methods, Hospital Mortality trends, Pandemics statistics & numerical data, Pneumonia, Viral epidemiology, Pneumonia, Viral therapy
- Abstract
Arising from the city of Wuhan, Hubei province in China, a novel coronavirus named severe acute respiratory syndrome coronavirus 2 has been rapidly spreading since its first presentation in late 2019. The World Health Organization declared a pandemic on the 11th March 2020, and as of 29th of April 2020 more than 3 million cases have been reported worldwide with over 225 000 confirmed deaths. Where mechanical ventilation may not be enough, extracorporeal membrane oxygenation (ECMO) could play a role as a form of rescue therapy and may provide beneficial results in the hands of skilled clinicians in centers with experience of using ECMO appropriately in selected patients. Our understanding of COVID-19 is ever-changing and the need for intensive care beds is rising, which means that ECMO will surely play a key role in the near future., (© 2020 The Authors. Journal of Cardiac Surgery published by Wiley Periodicals LLC.)
- Published
- 2020
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77. Structure, Function, Regulation and Phylogenetic Relationship of ZIP Family Transporters of Plants.
- Author
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Ajeesh Krishna TP, Maharajan T, Victor Roch G, Ignacimuthu S, and Antony Ceasar S
- Abstract
Zinc (Zn) is an essential micronutrient for plants and humans. Nearly 50% of the agriculture soils of world are Zn-deficient. The low availability of Zn reduces the yield and quality of the crops. The zinc-regulated, iron-regulated transporter-like proteins (ZIP) family and iron-regulated transporters (IRTs) are involved in cellular uptake of Zn, its intracellular trafficking and detoxification in plants. In addition to Zn, ZIP family transporters also transport other divalent metal cations (such as Cd
2+ , Fe2+ , and Cu2+ ). ZIP transporters play a crucial role in biofortification of grains with Zn. Only a very limited information is available on structural features and mechanism of Zn transport of plant ZIP family transporters. In this article, we present a detailed account on structure, function, regulations and phylogenetic relationships of plant ZIP transporters. We give an insight to structure of plant ZIPs through homology modeling and multiple sequence alignment with Bordetella bronchiseptica ZIP (BbZIP) protein whose crystal structure has been solved recently. We also provide details on ZIP transporter genes identified and characterized in rice and other plants till date. Functional characterization of plant ZIP transporters will help for the better crop yield and human health in future., (Copyright © 2020 Ajeesh Krishna, Maharajan, Victor Roch, Ignacimuthu and Antony Ceasar.)- Published
- 2020
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78. Exploitation of Hi-C sequencing for improvement of genome assembly and in-vitro validation of differentially expressing genes in Jatropha curcas L.
- Author
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Jalali S, Kancharla N, Yepuri V, and Arockiasamy S
- Abstract
Jatropha curcas is one of the major sources of renewable energy due to potential use of its oil as a biofuel. The genome of this crop is constituted by the high content of repetitive elements. We employed the Hi-C proximity ligation technique to re-scaffold our existing hybrid genome assembly of an elite genotype (RJC1) developed using Illumina and Pacbio technologies. We assembled 99.81% of non-truncated reads to achieve 266.80 Mbp of the genome with an N50 value of 1.58 Mb. Furthermore, we compared the efficiency of Hi-C-augmented genome assembly with the hybrid genome assembly and observed a ~ 50% reduction in scaffolds and a tenfold increase in the N50 value. The gene ontology analysis revealed the identification of terms for molecular function (45.52%), cellular component (33.47%), and biological function (20.99%). Comparative genomic analysis of 13-plant species showed the conservation of 414 lipid metabolizing genes identified in the KEGG pathway analysis. Differential gene expression (DGE) studies were conducted in the healthy and Jatropha mosaic virus-infected leaves via RNA-seq analysis and observed gene expression changes for 2185 genes. Out of these, we observed 546 genes having more than two-fold change of transcript level and among these 259 genes were down-regulated and 287 genes were up-regulated. To validate RNA-seq data, two DEGs were selected for gene expression analysis using qRT-PCR and the data was in correlation with in silico results. RNA-seq analysis further shows the identification of some of the candidate genes and may be useful to develop JMV resistant plants after functional validation. This Hi-C genome assembly provides a detailed accurate reference genome which could be utilized to improve Jatropha and other economically important Euphorbiaceae family members., Competing Interests: Conflict of interestThe authors declare that they have no conflict of interest., (© King Abdulaziz City for Science and Technology 2020.)
- Published
- 2020
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79. Synthesis of a 1,2,3-bistriazole derivative of embelin and evaluation of its effect on high-fat diet fed-streptozotocin-induced type 2 diabetes in rats and molecular docking studies.
- Author
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Stalin A, Kandhasamy S, Kannan BS, Verma RS, Ignacimuthu S, Kim Y, Shao Q, Chen Y, and Palani P
- Subjects
- Adipose Tissue drug effects, Adipose Tissue metabolism, Animals, Blood Glucose metabolism, Glucose Tolerance Test, Glucose Transporter Type 4 genetics, Glucose Transporter Type 4 metabolism, Insulin blood, Molecular Docking Simulation, PPAR gamma genetics, PPAR gamma metabolism, Rats, Streptozocin, Triazoles chemistry, Triazoles therapeutic use, Benzoquinones chemistry, Diabetes Mellitus, Type 2 drug therapy, Diet, High-Fat, Triazoles chemical synthesis, Triazoles pharmacology
- Abstract
The embelin derivative 2a was synthesized with the 1,2,3-bistriazole and spectral data confirmed its structural identity. Anti-diabetic and anti-lipidemic effects were evaluated using HFD-STZ induced type 2 diabetic rats. The derivative 2a (30 mg/kg b wt.) supplementation significantly (P ≤ 0.01) normalized the changed biochemical parameters like fasting blood glucose (FBG), body weights, plasma insulin level, total cholesterol (TC), triglycerides (TG) and marker enzymes of carbohydrate metabolism. The derivative 2a (30 mg/kg) also showed a significant effect on oral glucose tolerance test (OGTT) and intraperitoneal insulin tolerance test (ITT). But 15 mg/kg dose of derivative 2a failed to show any significant effects in HFD-STZ induced type2 diabetic rats. Histopathology analysis substantiated the protective effect of this derivative 2a (30 mg/kg b wt.) on the β-cells of the pancreatic, liver and adipose tissues in diabetic treated rats. Further, the expressions of PPARγ and GLUT4 were significantly enhanced in the epididymal adipose tissue. The HOMO and LUMO energies characterized the molecular stability of the derivative 2a with 6-311G++ (d, p) in DFT/B3LYP/LanL2DZ method using Gaussian09 program package. The molecular docking analysis also confirmed the activity of derivative 2a through hydrogen bond interaction with ARG 288, GLU 343, SER 342 and least energy value (-7.72 kcal/mol). Hence, the embelin-1,2,3-bis triazole derivative 2a (30 mg/kg) enhanced the activity of embelin and might be acting as a suitable drug for type 2 diabetes, obesity and its complications., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2020 Elsevier Inc. All rights reserved.)
- Published
- 2020
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80. Fucoidan serves a neuroprotective effect in an Alzheimer's disease model.
- Author
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Subaraja M, Anantha Krishnan D, Edwin Hillary V, William Raja TR, Mathew P, Ravikumar S, Gabriel Paulraj M, and Ignacimuthu S
- Subjects
- Animals, Brain drug effects, Brain metabolism, Computer Simulation, Disease Models, Animal, Drosophila melanogaster, Drug Evaluation, Preclinical, Maze Learning drug effects, Molecular Docking Simulation, Monocrotophos, Neurotransmitter Agents metabolism, PC12 Cells, Rats, Alzheimer Disease drug therapy, Neuroprotective Agents pharmacology, Neuroprotective Agents therapeutic use, Polysaccharides pharmacology, Polysaccharides therapeutic use
- Abstract
Alzheimer's disease (AD) is a progressive neurodegenerative disorder that causes memory and cognitive deficits. The present study was carried out to evaluate the protective effects of fucoidan in monocrotophos induced AD in Drosophila melanogaster. In silico studies showed that fucoidan exhibited binding energy of -9.3 kcal with proteins. Consistent with this, fucoidan, in a dose and time-dependent fashion, had inhibitory activity against cholinergic and monoamine-metabolized enzymes in vitro. Fucoidan inhibited the increase in total mRNA and protein in monocrotophos fed flies and prevented changes in biochemicals, neurochemicals and latency time of locomotor, learning and memory induced by monocrotophos. Together, the findings show that fucoidan serves a neuroprotective effect in Alzheimer's disease model in D. melanogaster.
- Published
- 2020
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81. Phosphate supply influenced the growth, yield and expression of PHT1 family phosphate transporters in seven millets.
- Author
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Maharajan T, Ceasar SA, Krishna TPA, and Ignacimuthu S
- Subjects
- Biological Transport, Edible Grain, Millets genetics, Millets growth & development, Phenotype, Phosphate Transport Proteins genetics, Phosphates deficiency, Plant Proteins genetics, Plant Proteins metabolism, Plant Roots genetics, Plant Roots growth & development, Plant Roots physiology, Plant Shoots genetics, Plant Shoots growth & development, Plant Shoots physiology, Millets physiology, Phosphate Transport Proteins metabolism, Phosphates metabolism
- Abstract
Main Conclusion: Phosphate starvation altered the root morphology and phosphate uptake with the induction of PHT1 family transporter genes in root and shoot tissues of seven millets. Millets are nutrient-rich cereals majorly cultivated in Asia and Africa. Foxtail millet (FoxM), pearl millet (PeaM), finger millet (FinM), kodo millet (KodM), little millet (LitM), proso millet (ProM), and barnyard millet (BarM) were examined for the influence of external phosphorous (P) supply on phenotypic traits, P uptake, yield, and PHosphate Transporter1 (PHT1) family gene expression. Millet seedlings grown under low Pi condition (LPC) produced significantly lower mean values for all traits except for lateral root length (LRL) and lateral root number (LRN) which were increased under LPC. Under LPC, seed weight (SW) also reduced by > 75% and had significantly lower levels of total P (TP) and Pi contents in leaf and root tissues. Expression dynamics of 12 PHT1 family (PHT1;1-1;12) transporters genes were analyzed in 7 millets. PHT1;2 has been found to be a constitutive transporter gene in all millets. Under LPC, root tissues showed the overexpression of PHT1;2, 1;3, 1;4 and 1;9 in FoxM, PHT1;1, 1;2, 1;3, 1;4, 1;8 and 1;10 in PeaM, PHT1;2 and 1;3 in FinM and ProM and PHT1;3, 1;6 and 1;11 in BarM. In leaf, LPC induced the expression of PHT1;3, 1;4 and 1;6 in FoxM, PHT1;2, 1;3, 1;4 and 1;8 in PeaM, PHT1;2, 1;3 and 1;4 in FinM and KodM, PHT1;2 in LitM and PHT1;4 in ProM and BarnM. This comprehensive study on the influence of P in phenotype, physiology, and molecular responses may help to improve the P uptake and its use efficiency of millets in future.
- Published
- 2019
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82. Mosquitocidal Activity of the Pale Brittle Stem Mushroom, Psathyrella candolleana (Agaricomycetes), against Three Vector Mosquitoes.
- Author
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Sivanandhan S, Ganesan P, David RHA, Paulraj MG, and Ignacimuthu S
- Subjects
- Aedes, Animals, Anopheles, Complex Mixtures isolation & purification, Culex, Insecticides isolation & purification, Larva, Mosquito Vectors, Agaricales chemistry, Complex Mixtures chemistry, Culicidae, Insecticides chemistry
- Abstract
The aim of the present study was to screen for mosquito larvicidal activity of methanol extract of a wild mushroom Psathyrella candolleana against Culex quinquefasciatus, Aedes aegypti, and Anopheles stephensi. Larvae and eggs were exposed to four different concentrations (62.5, 125, 250, and 500 ppm) and mortality was assessed 24 and 120 h after treatment. The LC50 and LC90 values of the extract were calculated. Methanol crude extract of P. candolleana showed good larvicidal activity against the third instar larvae of Cx. quinquefasciatus with LC50 and LC90 values of 166.713 and 259.17 ppm, respectively, after 24 h of exposure. No larvicidal activity was observed against Ae. aegypti and An. stephensi. The methanol extract of P. candolleana presented 88% ovicidal activity against Cx. quinquefasciatus at 500 ppm concentration 120 h after treatment. The active methanol extract was tested for toxicity against non-target organism and found was to have no toxicity. Histopathological studies of the treated larvae revealed serious damages to the midgut cells. The mushroom species was confirmed by 5.8S rRNA sequence and phylogenetic tree was constructed. These results suggest that the methanol extract of P. candolleana could be used in Cx. quinquefasciatus control programs as a new eco-friendly larvicide.
- Published
- 2019
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83. Biocontrol and non-target effect of fractions and compound isolated from Streptomyces rimosus on the immature stages of filarial vector Culex quinquefasciatus Say (Diptera: Culicidae) and the compound interaction with Acetylcholinesterase (AChE1).
- Author
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Ganesan P, Stalin A, Gabriel Paulraj M, Balakrishna K, Ignacimuthu S, and Abdullah Al-Dhabi N
- Subjects
- Animals, Cholinesterase Inhibitors pharmacology, Culex enzymology, Culex growth & development, Culex metabolism, Lethal Dose 50, Mosquito Vectors drug effects, Mosquito Vectors enzymology, Mosquito Vectors growth & development, Mosquito Vectors metabolism, Ovum drug effects, Acetylcholinesterase metabolism, Biological Products pharmacology, Culex drug effects, Diethylhexyl Phthalate pharmacology, Insecticides pharmacology, Larva drug effects, Streptomyces rimosus chemistry
- Abstract
The present study was aimed to check the mosquitocidal activity of intracellular methanol extract fractions and the compound di (2-ethylhexyl) phthalate isolated from Streptomyces rimosus. The isolated compound was also analyzed for its interaction with Acetylcholinesterase (AChE1). The larvae and eggs of Culex quinquefasciatus were exposed to four different concentrations such as 2.5, 5.0, 7.5 and 10 ppm for fractions and 0.5, 1.0, 1.5 and 2.0 ppm for compound. After 24 and 120 h post treatment, the larval mortality and ovicidal activity were recorded. Fractions collected from the intracellular methanol extract were tested for larvicidal activity; among them Fraction 4 was found to be the active fraction. Fraction 4 showed 74% larvicidal activity with LC
50 and LC90 values of 6.9 and 17.2 ppm, respectively, in 24 h against the larvae of Cx. quinquefasciatus. Fraction 4 showed 95% ovicidal activity at 10 ppm concentration after 120 h post treatment. The eluted compound di(2-ethylhexyl) phthalate was highly toxic and exhibited promising activity against the eggs of Cx. quinquefasciatus. The compound presented 94% ovicidal activity at 2.0 ppm concentration after 120 h post treatment. The larvae of Cx. quinquefasciatus were exposed to di(2-ethylhexyl) phthalate which showed good activity in a concentration-dependent manner. The compound showed 76% larvicidal activity against the larvae of Cx. quinquefasciatus with LC50 and LC90 values of 1.22 and 3.28 ppm, respectively, at 2 ppm concentration in 24 h. Fraction 4 and the compound were subjected to toxicity study against non-target organism and were found to be nontoxic. The present studies revealed that the treated larvae showed serious damage in the midgut cells. Growth disruption and larval deformities were observed in compound-treated larvae. The compound was highly active and inhibited AChE in a concentration-dependent manner. Computational analysis of the compound had strong interaction with AChE1 of Cx. quinquefasciatus. These results clearly showed that Fraction 4 and the compound isolated from S. rimosus can be used to control the life stages of Cx. quinquefasciatus; it will be a good alternative to synthetic insecticides., (Copyright © 2018 Elsevier Inc. All rights reserved.)- Published
- 2018
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84. Roles of microRNA in prostate cancer cell metabolism.
- Author
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Kasomva K, Sen A, Paulraj MG, Sailo S, Raphael V, Puro KU, Assumi SR, and Ignacimuthu S
- Subjects
- Humans, Hyaluronan Receptors metabolism, Male, Prostatic Neoplasms genetics, Tumor Hypoxia, MicroRNAs metabolism, Prostatic Neoplasms metabolism, Prostatic Neoplasms pathology
- Abstract
MicroRNAs are non-coding RNA which functions as regulators of genes expression. MicroRNAs have shown their biological functions in cell proliferation, cell cycle, cell metabolism, apoptosis, invasion and metastasis. Cancer cells have the ability to grow in the absence of growth factors by increased metabolic activity. MicroRNAs regulate cell metabolic processes by targeting the key enzymes or transporters and change the metabolic activities by interfering with oncogenes/tumor suppressors, hypoxia, signalling pathways and cell adhesion. This review mainly explains the roles of microRNAs in prostate cancer cell metabolism, such as glucose uptake, glycolysis and lactate secretion, lipid metabolism and interaction with signalling pathways. The relation of microRNAs with hypoxia and cell adhesion in cell metabolism is also highlighted. Therefore, miRNAs help in regulating the metabolism of survived tumor cells, understanding such miRNA-mediated interaction could lead to new avenues in therapeutic application to treat PCa., (Copyright © 2018 Elsevier Ltd. All rights reserved.)
- Published
- 2018
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85. Finger Millet [ Eleusine coracana (L.) Gaertn.] Improvement: Current Status and Future Interventions of Whole Genome Sequence.
- Author
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Antony Ceasar S, Maharajan T, Ajeesh Krishna TP, Ramakrishnan M, Victor Roch G, Satish L, and Ignacimuthu S
- Abstract
The whole genome sequence (WGS) of the much awaited, nutrient rich and climate resilient crop, finger millet ( Eleusine coracana (L.) Gaertn.) has been released recently. While possessing superior mineral nutrients and excellent shelf life as compared to other major cereals, multiploidy nature of the genome and relatively small plantation acreage in less developed countries hampered the genome sequencing of finger millet, disposing it as one of the lastly sequenced genomes in cereals. The genomic information available for this crop is very little when compared to other major cereals like rice, maize and barley. As a result, only a limited number of genetic and genomic studies has been undertaken for the improvement of this crop. Finger millet is known especially for its superior calcium content, but the high-throughput studies are yet to be performed to understand the mechanisms behind calcium transport and grain filling. The WGS of finger millet is expected to help to understand this and other important molecular mechanisms in finger millet, which may be harnessed for the nutrient fortification of other cereals. In this review, we discuss various efforts made so far on the improvement of finger millet including genetic improvement, transcriptome analysis, mapping of quantitative trait loci (QTLs) for traits, etc. We also discuss the pitfalls of modern genetic studies and provide insights for accelerating the finger millet improvement with the interventions of WGS in near future. Advanced genetic and genomic studies aided by WGS may help to improve the finger millet, which will be helpful to strengthen the nutritional security in addition to food security in the developing countries of Asia and Africa.
- Published
- 2018
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86. Larvicidal, Ovicidal, and Histopathological Effects of the Sulphur Polypore Mushroom, Laetiporus sulphureus (Agaricomycetes), Collected from Tamil Nadu, India against Mosquitoes.
- Author
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Sivanandhan S, Ganesan P, Paulraj MG, and Ignacimuthu S
- Subjects
- Animals, Anopheles growth & development, Culex growth & development, Female, India, Insecticides chemistry, Larva drug effects, Larva growth & development, Male, Ovum growth & development, Plant Extracts chemistry, Sulfur analysis, Anopheles drug effects, Basidiomycota chemistry, Culex drug effects, Insecticides pharmacology, Ovum drug effects, Plant Extracts pharmacology
- Abstract
This study was conducted to determine the mosquitocidal activity of 6 species of higher Basidiomycetes collected from various places in the state of Tamil Nadu, India. The mushrooms were identified using MycoKey MMI software. We used morphological characteristics such as size, color, height, width (of the cap, lamellae, stipe, and fruiting body), spore deposits, and the presence or absence of ring to identify species. Eggs and larvae of Culex quinquefasciatus and Anopheles stephensi were exposed to various concentrations (62.5, 125.0, 250.0, and 500.0 ppm) of extracts from the 6 mushrooms. The extracts were dissolved in dimethyl sulfoxide. Among the 6 mushrooms, the methanol extract of Laetiporus sulphureus showed high toxicity toward mosquitoes at different life stages, with 96% larvicidal activity against A. stephensi and 76% activity against C. quinquefasciatus. After 24 hours, we found half-maximal lethal concentrations of 155.862 ppm for A. stephensi and 227.225 ppm for C. quinquefasciatus, and 90% lethal concentrations of 424.128 ppm for A. stephensi and 1011.663 ppm for C. quinquefasciatus. The extracts also showed strong ovicidal activity against mosquito eggs: 100% activity against A. stephensi and 91% activity against C. quinquefasciatus were observed at an extract concentration of 500 ppm 120 hours after treatment. The methanol extract of L. sulphureus was tested for toxicity against a nontarget organism, but we found none. Histopathological studies of the treated larvae revealed serious damage to cells in the midgut. These results suggest that the methanol extract of L. sulphureus is a good natural source for controlling mosquitoes.
- Published
- 2018
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87. Toxic effects of Solanum xanthocarpum Sch &Wendle against Helicoverpa armigera (Hub.), Culex quinquefasciatus (Say.) and Eisenia fetida (Savigny, 1826).
- Author
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Baskar K, Ananthi J, and Ignacimuthu S
- Subjects
- Animals, Culex growth & development, Dose-Response Relationship, Drug, Larva drug effects, Lethal Dose 50, Moths growth & development, Oligochaeta growth & development, Pesticides isolation & purification, Plant Extracts isolation & purification, Plant Leaves chemistry, Culex drug effects, Moths drug effects, Oligochaeta drug effects, Pesticides pharmacology, Plant Extracts pharmacology, Solanum chemistry
- Abstract
Many commercially available agro and household chemicals are used as pesticides, repellents, and growth inhibitors against insect pests. The repeated uses of these chemicals against insect pests have caused the development of resistance in them; they also cause ill effects on nontarget organisms. The present study was aimed to evaluate the antifeedant, larvicidal, pupicidal, and biochemical effects of the solvent extracts of Solanum xanthocarpum against third instar larvae of Helicoverpa armigera. Hexane, chloroform and ethyl acetate extracts were subjected to phytochemical analysis. The results revealed the presence of terpenoids, flavonoid, and quinone. Maximum antifeedant activity of 72.30% was recorded in chloroform extract followed by hexane (69.02%) and ethyl acetate (57.40%) extracts against H. armigera. Chloroform extracts of S. xanthocarpum showed more than 60% larvicidal and pupicidal activity against H. armigera. The effective chloroform extract was fractionated with increasing polarity of solvent system (hexane, chloroform, and ethyl acetate extracts). Based on the TLC profile, nine major fractions were isolated. The fourth fraction showed higher antifeedant, larvicidal, and pupicidal activity against H. armigera. The effective fraction reduced the hemolymph and gut protein concentration in a concentration-dependent manner (r
2 0.99). The effective fraction 4 showed 100% larvicidal activity at 500 ppm concentration with LC50 value of 227.95 ppm. The fourth fraction did not show any toxic symptom or mortality of earthworm. Based on these results, this effective fraction could be used in the development of a pesticide formulation to control insect.- Published
- 2018
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88. Protective effects of Ficus carica leaves on glucose and lipids levels, carbohydrate metabolism enzymes and β-cells in type 2 diabetic rats.
- Author
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Stephen Irudayaraj S, Christudas S, Antony S, Duraipandiyan V, Naif Abdullah AD, and Ignacimuthu S
- Subjects
- Acetates chemistry, Animals, Biomarkers blood, Blood Glucose metabolism, Diabetes Mellitus, Experimental blood, Diabetes Mellitus, Experimental chemically induced, Diabetes Mellitus, Experimental enzymology, Diabetes Mellitus, Type 2 blood, Diabetes Mellitus, Type 2 chemically induced, Diabetes Mellitus, Type 2 enzymology, Diet, High-Fat, Dose-Response Relationship, Drug, Glucose Tolerance Test, Glyburide pharmacology, Glycogen metabolism, Hypoglycemic Agents isolation & purification, Hypolipidemic Agents isolation & purification, Insulin blood, Insulin Resistance, Insulin-Secreting Cells metabolism, Liver enzymology, Male, Phytotherapy, Plant Extracts isolation & purification, Plants, Medicinal, Rats, Wistar, Solvents chemistry, Streptozocin, Time Factors, Blood Glucose drug effects, Diabetes Mellitus, Experimental drug therapy, Diabetes Mellitus, Type 2 drug therapy, Ficus chemistry, Hypoglycemic Agents pharmacology, Hypolipidemic Agents pharmacology, Insulin-Secreting Cells drug effects, Lipids blood, Liver drug effects, Plant Extracts pharmacology, Plant Leaves chemistry
- Abstract
Context: The decoctions of Ficus carica Linn. (Moraceae) leaves are used in the folklore treatment of diabetes., Objective: To evaluate the effect of F. carica on glucose and lipids levels, carbohydrate metabolism enzymes and β-cells protective effects in type 2 diabetes., Material and Methods: Diabetes was induced in 15 days high-fat diet (HFD)-fed Wistar rats by intraperitoneal injection of streptozotocin (STZ) (40 mg/kg). The ethyl acetate extract (250 and 500 mg/kg) of F. carica leaves was administered for 28 days. Oral glucose tolerance (OGTT) and intraperitoneal insulin tolerance tests (ITT) were evaluated on 15th and 25th days, respectively., Results: The ethyl acetate extract (250 and 500 mg/kg) of n F. carica leaves showed significant effect (p < 0.005) in the levels of blood glucose, total cholesterol (TC), triglycerides (TG), body weight and hepatic glycogen. In OGTT, F. carica (250 and 500 mg/kg) significantly (p < 0.005) detained the increase in blood glucose levels at 60 and 120 min and in ITT, F. carica enhanced the glucose utilization significantly (p < 0.005) over 30 and 60 min compared to diabetic control. Further, the altered activities of key carbohydrate metabolizing enzymes such as glucose-6-phosphatase, fructose-1,6-bisphosphatase and hexokinase in the liver tissue of diabetic rats were significantly (p < 0.005) reverted to near normal levels upon treatment with F. carica. Immumohistochemical studies of islets substantiated the cytoprotective effect on pancreatic β-cells., Discussion and Conclusions: F. carica leaves exerted significant effect on carbohydrate metabolism enzymes with promising hypoglycemic and hypolipidemic activities in type 2 diabetic rats.
- Published
- 2017
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89. Comparative studies of tripolyphosphate and glutaraldehyde cross-linked chitosan-botanical pesticide nanoparticles and their agricultural applications.
- Author
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Gabriel Paulraj M, Ignacimuthu S, Gandhi MR, Shajahan A, Ganesan P, Packiam SM, and Al-Dhabi NA
- Subjects
- Agriculture, Animals, Drug Carriers chemistry, Drug Stability, Insecta drug effects, Nanoparticles ultrastructure, Parasitic Sensitivity Tests, Particle Size, Spectroscopy, Fourier Transform Infrared, Chitosan chemistry, Cross-Linking Reagents chemistry, Glutaral chemistry, Nanoparticles chemistry, Pesticides chemistry, Phytochemicals chemistry, Polyphosphates chemistry
- Abstract
A nanopesticide formulation was developed using chitosan and a botanical pesticide PONNEEM
® and its antifeedant, larvicidal and growth regulating activities were screened against Helicoverpa armigera, a major lepidopteran pest. Chitosan nanoparticles (CSNs) were prepared by using two different cross-linking agents namely glutaraldehyde (GLA) and tripolyphosphate (TPP). The effects of cross linking agents on CSNs and the biological properties against the insect pest were also studied. Cross linking of chitosan with either TPP or GLA was confirmed through Fourier Transform Infrared (FTIR) spectroscopy. Electron micrograph revealed that the size of CSNs varied from 32 to 90nm. The stability of nanoparticles lasted for 9days in CSNs-TPP-PONNEEM. In CSNs-GLA-PONNEEM, the stability of nanoparticles was higher. CSNs-TPP-PONNEEM treatment recorded 88.5% antifeedant activity and 90.2% larvicidal activity against H. armigera. Weights of H. armigera pupae in CSNs-TPP-PONNEEM treatment were significantly low. Chitosan-based nano-pesticide formulation holds great promise in H. armigera management., (Copyright © 2017 Elsevier B.V. All rights reserved.)- Published
- 2017
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90. Complete mitochondrial genome sequence of fruit-piercing moth Eudocima phalonia (Linnaeus, 1763) (Lepidoptera: Noctuoidea).
- Author
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Sivasankaran K, Mathew P, Anand S, Ceasar SA, Mariapackiam S, and Ignacimuthu S
- Abstract
The complete mitochondrial genome of the fruit piercing moth Eudocima phalonia (Linnaeus, 1763) (Lepidoptera: Noctuoidea) was sequenced and characterized (Genbank Accession No: KY196412). The complete mitogenome is a circular molecule of 15,575 bp length, consisting of 13 protein-coding genes (PCGs), two ribosomal RNA genes ( rrnS and rrnL ), 22 transfer RNA (tRNA) genes and an A + T-rich region (D-loop). The nucleotide composition of the genome is highly A + T biased, accounting for 80.67% of nucleotides. All tRNAs have putative secondary structures that are characteristic of mitochondrial tRNA. Most of the PCGs were initiated by typical ATN codons. Five genes were initiated by unusual codons. Cox1 gene was initiated by an unusual CGA codon and terminated by the typical stop codon GAA. Six genes ended with a single T. The A + T-rich region of 336 bp consisted of repetitive sequences, including two ATAGA motifs, a 19 bp poly-T stretch and three microsatellite-like regions ((TA)
4 , (TA)6 and two (TA)7 ). Moreover, three large tandem (one 40 bp and two 25 bp) repeated elements were identified in A + T-rich region. Phylogenetic analysis using PCGs revealed that Superfamily Noctuoidea is a monophyletic group.- Published
- 2017
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91. Myoinositol ameliorates high-fat diet and streptozotocin-induced diabetes in rats through promoting insulin receptor signaling.
- Author
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Antony PJ, Gandhi GR, Stalin A, Balakrishna K, Toppo E, Sivasankaran K, Ignacimuthu S, and Al-Dhabi NA
- Subjects
- Administration, Oral, Animals, Blood Glucose metabolism, Body Weight drug effects, Diabetes Mellitus, Experimental blood, Diabetes Mellitus, Experimental complications, Diabetes Mellitus, Experimental pathology, Diet, High-Fat, Drinking Behavior drug effects, Fasting blood, Feeding Behavior drug effects, Gene Expression Regulation drug effects, Glucose Tolerance Test, Hyperlipidemias blood, Hyperlipidemias complications, Hyperlipidemias drug therapy, Immunohistochemistry, Inositol administration & dosage, Inositol chemistry, Inositol pharmacology, Insulin blood, Insulin Resistance, Kidney drug effects, Kidney pathology, Lipids blood, Liver drug effects, Liver pathology, Male, Molecular Docking Simulation, Polyethylene Glycols, RNA, Messenger genetics, RNA, Messenger metabolism, Rats, Wistar, Diabetes Mellitus, Experimental drug therapy, Inositol therapeutic use, Receptor, Insulin metabolism, Signal Transduction drug effects
- Abstract
Mimosa pudica Linn. (Mimosaceae) has been traditionally used for the management of type 2 diabetes mellitus (T2DM) in India. The present study evaluates the therapeutic efficacy of myoinositol (25 and 50mg/kg) isolated from M. pudica stem methanol extract in Triton WR-1339 induced hyperlipidemic and high-fat diet (HFD) fed-streptozotocin (STZ)-induced insulin-resistant diabetic rats. Lipid biomarkers, fasting blood glucose (FBG), changes in body weight, food and water intakes, plasma insulin, HOMA-IR, oral glucose tolerance, intraperitoneal insulin tolerance, urea, creatinine, marker enzymes of liver function, β-cell function and the expression levels of insulin receptor-induced signaling molecules were studied. Molecular-docking was also carried out to determine the possible interactions of myoinositol into the active sites of insulin-induced signaling markers. In addition, histology of liver, pancreas, kidney, heart and adipose tissues were also performed. In Triton WR-1339 induced hyperlipidemic rats, myoinositol (25 and 50mg/kg) exhibited significant reductions in total cholesterol: 37.5% and 59.73%, triglycerides: 57.75% and 80.14% and LDL-c: 81.44% and 101.75% respectively. HFD fed-STZ receiving myoinositol (25 and 50mg/kg) showed significant reductions in fasting blood glucose: 55.68% and 56.48%, plasma insulin level: 25.45% and 27.06% when compared with diabetic control. It significantly normalized the hyperglycemia induced biochemical abnormalities in insulin-resistant diabetic rats. Furthermore, it demonstrated cytoprotective effects besides increase in the intensity of positive reaction for insulin in pancreas. Myoinositol enhanced the level of PPARγ expression in the adipose tissue of treated rats when compared with rats that did not receive drug treatment; also, it significantly upregulated GLUT4 and IR signaling molecules. Myoinositol had predicted the interactions within the active sites of PPARγ, GLUT4 and IR. These findings suggested that myoinositol could play an effective role in glucose disposal into adipose tissue by insulin-dependent signaling cascade mechanism; hence it could be used in the treatment of obesity-associated T2DM., (Copyright © 2017 Elsevier Masson SAS. All rights reserved.)
- Published
- 2017
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92. Current status of genome editing in vector mosquitoes: A review.
- Author
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Reegan AD, Ceasar SA, Paulraj MG, Ignacimuthu S, and Al-Dhabi NA
- Subjects
- Animals, Humans, Culicidae genetics, Gene Editing, Insect Vectors genetics
- Abstract
Mosquitoes pose a major threat to human health as they spread many deadly diseases like malaria, dengue, chikungunya, filariasis, Japanese encephalitis and Zika. Identification and use of novel molecular tools are essential to combat the spread of vector borne diseases. Genome editing tools have been used for the precise alterations of the gene of interest for producing the desirable trait in mosquitoes. Deletion of functional genes or insertion of toxic genes in vector mosquitoes will produce either knock-out or knock-in mutants that will check the spread of vector-borne diseases. Presently, three types of genome editing tools viz., zinc finger nuclease (ZFN), transcription activator-like effector nucleases (TALEN) and clustered regulatory interspaced short palindromic repeats (CRISPR) and CRISPR associated protein 9 (Cas9) are widely used for the editing of the genomes of diverse organisms. These tools are also applied in vector mosquitoes to control the spread of vector-borne diseases. A few studies have been carried out on genome editing to control the diseases spread by vector mosquitoes and more studies need to be performed with the utilization of more recently invented tools like CRISPR/Cas9 to combat the spread of deadly diseases by vector mosquitoes. The high specificity and flexibility of CRISPR/Cas9 system may offer possibilities for novel genome editing for the control of important diseases spread by vector mosquitoes. In this review, we present the current status of genome editing research on vector mosquitoes and also discuss the future applications of vector mosquito genome editing to control the spread of vectorborne diseases.
- Published
- 2017
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93. Biocontrol Properties of Basidiomycetes: An Overview.
- Author
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Sivanandhan S, Khusro A, Paulraj MG, Ignacimuthu S, and Al-Dhabi NA
- Abstract
In agriculture, there is an urgent need for alternate ecofriendly products to control plant diseases. These alternate products must possess preferable characteristics such as new modes of action, cost effectiveness, biodegradability, and target specificity. In the current scenario, studies on macrofungi have been an area of importance for scientists. Macrofungi grow prolifically and are found in many parts of the world. Basidiomycetes (mushrooms) flourish ubiquitously under warm and humid climates. Basidiomycetes are rich sources of natural antibiotics. The secondary metabolites produced by them possess antimicrobial, antitumor, and antioxidant properties. The present review discusses the potential role of Basidiomycetes as anti-phytofungal, anti-phytobacterial, anti-phytoviral, mosquito larvicidal, and nematicidal agents.
- Published
- 2017
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94. Toxic effect of Atalantia monophylla essential oil on Callosobruchus maculatus and Sitophilus oryzae.
- Author
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Nattudurai G, Baskar K, Paulraj MG, Islam VI, Ignacimuthu S, and Duraipandiyan V
- Subjects
- Animals, Coleoptera enzymology, Coleoptera growth & development, Coleoptera physiology, Fertility drug effects, Fumigation, Oils, Volatile chemistry, Ovum drug effects, Ovum physiology, Pesticides chemistry, Toxicity Tests, Coleoptera drug effects, Oils, Volatile toxicity, Pesticides toxicity, Rutaceae chemistry
- Abstract
The hydrodistillated essential oil of Atalantia monophylla was subjected to GC-MS. Forty compounds were presented in the essential oil. Eugenol (19.76 %), sabinene (19.57 %), 1,2-dimethoxy-4-(2-methoxyethenyl) benzene (9.84 %), beta-asarone (7.02 %) and methyl eugenol (5.52 %) were found the predominant compounds. The oil was tested for fumigant toxicity and repellent activity against Callosobruchus maculatus and Sitophilus oryzae. The development stage of C. maculatus fecundity, adult emergence and also ovicidal activities were studied by the treatment of A. monophylla oil. The oil exhibited considerable fumigation toxicity (70.22 %), repellent activity (85.24 %) and ovicidal activity (100 %) against C. maculatus. The oil significantly reduced the protein, esterase, acetylcholinesterase and glutathione S-transferase on C. maculatus and S. oryzae. It can be considered that A. monophylla has a potential insecticide against stored product pests.
- Published
- 2017
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95. Antioxidant, antilipidemic and antidiabetic effects of ficusin with their effects on GLUT4 translocation and PPARγ expression in type 2 diabetic rats.
- Author
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Irudayaraj SS, Stalin A, Sunil C, Duraipandiyan V, Al-Dhabi NA, and Ignacimuthu S
- Subjects
- Adipose Tissue drug effects, Adipose Tissue metabolism, Animals, Antioxidants chemistry, Antioxidants isolation & purification, Blood Glucose analysis, Diabetes Mellitus, Type 2 blood, Diabetes Mellitus, Type 2 metabolism, Ficus chemistry, Ficusin chemistry, Ficusin isolation & purification, Hypoglycemic Agents chemistry, Hypoglycemic Agents isolation & purification, Hypolipidemic Agents chemistry, Hypolipidemic Agents isolation & purification, Insulin blood, Lipids blood, Male, Rats, Wistar, Antioxidants therapeutic use, Diabetes Mellitus, Type 2 drug therapy, Ficusin therapeutic use, Glucose Transporter Type 4 metabolism, Hypoglycemic Agents therapeutic use, Hypolipidemic Agents therapeutic use, PPAR gamma metabolism
- Abstract
In this study, the antioxidant, antilipidemic and antidiabetic effects of ficusin isolated from Ficus carica leaves and their effects on GLUT4 translocation and PPARγ expression were evaluated in HFD-STZ induced type 2 diabetic rats. Ficusin (20 and 40 mg/kg b. wt.) lowered the levels of fasting blood glucose, plasma insulin and body weight gain, in HFD-STZ induced diabetic rats. Ficusin also significantly lowered the serum antioxidant enzymes (SOD, CAT and GPx) and lipids (TC, TG and FFA) levels to near normal. Ficusin significantly enhanced the PPARγ expression and improved the translocation and activation of GLUT4 in the adipose tissue. Molecular docking analysis exhibited promising interactions of GLUT4 and PPARγ into their active sites. This study suggests that ficusin improved the insulin sensitivity on adipose tissue and it can be used for the treatment of obesity related type 2 diabetes mellitus., (Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.)
- Published
- 2016
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96. Hypoglycemic activity of 6-bromoembelin and vilangin in high-fat diet fed-streptozotocin-induced type 2 diabetic rats and molecular docking studies.
- Author
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Stalin A, Irudayaraj SS, Gandhi GR, Balakrishna K, Ignacimuthu S, and Al-Dhabi NA
- Subjects
- Animals, Body Weight, Glucose Tolerance Test, Insulin blood, Lipids blood, Male, Molecular Docking Simulation, Rats, Rats, Wistar, Streptozocin, Benzoquinones therapeutic use, Diabetes Mellitus, Experimental blood, Diet, High-Fat, Hypoglycemic Agents therapeutic use
- Abstract
Aims: This paper investigates the hypoglycemic activity of two derivatives of embelin (1) viz. 6-bromoembelin (2) and vilangin (3), in high-fat diet - STZ induced diabetic rats., Main Methods: The effects of 6-bromoembelin (2) and vilangin (3) on insulin resistance, β-cell dysfunction and glucose transport in high-fat diet (HFD) fed-streptozotocin (STZ) (40mg/kg) induced type 2 diabetic rats were evaluated. The binding modes of 6-bromoembelin (2) and vilangin (3) into PPARγ, PI3K, Akt, and GLUT4 were also studied using Autodock 4.2 and ADT 1.5.6 programs., Key Findings: At the dose of 30mg/kg, the plasma glucose, plasma insulin and body weight were reduced by both embelin derivatives in diabetic rats. Additionally the altered lipid profiles and hexokinase, glucose-6-phosphatase and fructose-1,6-bisphosphatase levels were brought to normal. Compared to diabetic control group, there was a significant increase in the expression of PPARγ in epididymal adipose tissue. Inhibition of adipogenic activity and mild activation of PPARγ levels in the skeletal muscle and liver were observed. In epididymal adipose tissue, the compounds increased the insulin-mediated glucose uptake through the activation and translocation of GLUT4 in PI3K/p-Akt signaling cascade., Significance: The derivatives of embelin such as 6-bromoembelin (2) and vilangin (3) may be useful in the prevention and treatment of obesity-linked type 2 diabetes mellitus., (Copyright © 2016 Elsevier Inc. All rights reserved.)
- Published
- 2016
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97. Bioefficacy of ecbolin A and ecbolin B isolated from Ecbolium viride (Forsk.) Alston on dengue vector Aedes aegypti L. (Diptera: Culicidae).
- Author
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Reegan AD, Gandhi MR, Sivaraman G, Cecilia KF, Ravindhran R, Balakrishna K, Paulraj MG, and Ignacimuthu S
- Abstract
Ecbolin A and ecbolin B were isolated from ethyl acetate extract of Ecbolium viride (Forsk.) Alston root and evaluated for larvicidal and growth disturbance activities against Aedes aegypti L. (Diptera: Culicidae). For larvicidal activity, the third instar larvae of A. aegypti were exposed to different concentrations viz., 1.0, 2.5, 5.0 and 10 ppm for each compound. Among the two compounds screened, ecbolin B recorded highest larvicidal activity with LC
50 and LC90 values of 0.70 and 1.42 ppm, respectively. In control, the larval behaviour was normal. The active compound ecbolin B was tested for growth disruption activity at sub lethal concentrations viz., 0.5, 1.0 ppm and observed for malformation like larval gut elongation, larval longevity, intermediates, malformed adults, failed adult emergence and compared with methoprene. The results showed significant level of larva-pupa intermediates, pupa-adult intermediates, malformed adult emergence and less adult formation against A. aegypti . The histopathological results revealed a severe damage on the midgut epithelial columnar cells (CC) and cuboidal cells (CU) in ecbolin B treated larvae of A. aegypti . Similarly peritrophic membrane (pM) was also observed to be damaged in the treated larvae. The present results suggest that, ecbolin B could be used as a larvicidal agent against dengue vector A. aegypti .- Published
- 2016
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98. Hepatoprotective Effect of Tricholoma giganteum (Agaricomycetes) in a Nonalcoholic Fatty Liver Disease Rat Model.
- Author
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Govindaraj R, Paulraj MG, Toppo E, Pandikumar P, Ignacimuthu S, and Al-Dhabi NA
- Subjects
- Animals, Ethanol, Male, Non-alcoholic Fatty Liver Disease chemically induced, Protective Agents administration & dosage, Rats, Dietary Carbohydrates adverse effects, Dietary Fats adverse effects, Non-alcoholic Fatty Liver Disease prevention & control, Tricholoma chemistry
- Abstract
Different concentrations of standardized ethanolic extract from the basidiocarps of Tricholoma giganteum Massee (TgEtOH) were screened for hepatoprotective effects in an animal model of rats with nonalcoholic fatty liver disease (NAFLD) fed a high-fat and high-fructose diet. After 4 weeks of treatment with TgEtOH, the relative liver weights, serum lipid concentrations, and biochemical profiles were found to be normal in treated animals compared with those given a standard drug. The macroscopic and histopathological studies clearly indicated that 200 mg/kg of ethanolic extract was effective in ameliorating the abnormalities of NAFLD. The findings indicate the efficacy of T. giganteum extract in liver protection. Future experiments on bioassay tailored fractionation of TgEtOH and mechanistic-based evaluation are required to assess the potential application of this mushroom as a food supplement in NAFLD.
- Published
- 2016
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99. MicroRNA in prostate cancer.
- Author
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Khanmi K, Ignacimuthu S, and Paulraj MG
- Subjects
- Cell Cycle, Cell Proliferation, Humans, Male, Prostatic Neoplasms metabolism, Prostatic Neoplasms pathology, Prostatic Neoplasms therapy, Receptors, Androgen metabolism, MicroRNAs metabolism, Prostatic Neoplasms genetics
- Abstract
In the United States of America male prostate cancer (PCa) is the most dominant malignancy and the second highest cause of cancer-related mortality risk compared to lung and colon cancers. MicroRNAs (miRNAs) are a class of endogenously expressed small, non-coding, single-stranded RNA which function as regulators of gene expression. They influence various physiological and pathophysiological processes. In this review, we focus on the regulation of miRNAs in prostate cancer and their mechanisms which contribute to prostate carcinogenesis. The relation of miRNAs with androgen signaling is highlighted and the prospects of miRNAs for clinical therapies are discussed., (Copyright © 2015 Elsevier B.V. All rights reserved.)
- Published
- 2015
- Full Text
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100. A novel biopesticide PONNEEM to control human vector mosquitoes Anopheles stephensi L. and Culex quinquefasciatus Say.
- Author
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Maheswaran R and Ignacimuthu S
- Subjects
- Animals, Anopheles enzymology, Azadirachta chemistry, Culex enzymology, Female, Glutathione Transferase metabolism, Humans, Insect Proteins metabolism, Larva drug effects, Larva enzymology, Lethal Dose 50, Oviposition drug effects, Anopheles drug effects, Culex drug effects, Insecticides pharmacology, Plant Oils pharmacology
- Abstract
Organophosphate pesticides are widely used in vector mosquito management and agricultural pest management. These chemicals enter into natural water bodies and soil and cause hazards to the environment. The objective of this study was to prepare a natural pesticide which will not harm the environment and yet control vector mosquitoes. PONNEEM, a novel biopesticide, patented and prepared from the oils of Azadirachta indica and Pongamia glabra, was tested against Anopheles stephensi and Culex quinquefasciatus. One hundred percent larvicidal and ovicidal activities were observed at 0.1-ppm concentration of PONNEEM against the two mosquito species under laboratory and sunlight conditions up to 12 months from the date of manufacture. Very high oviposition reduction of 26.46 and 32.16 % is also recorded. Reductions in α-esterase level (0.0818 ± 0.340 and 0.2188 ± 0.003), β-esterase level (0.0866 ± 0.026 and 0.0398 ± 0.010 μg naphthol produced/min/mg larval protein), glutathione S-transferase enzyme (14.2571 ± 0.51 and 15.3326 ± 0.51 μmol/min/mg larval protein) and total protein levels (0.0390 ± 0.008 and 0.1975 ± 0.029 mg/individual larva in treated groups of A. stephensi and C. quinquefasciatus at 0.1-ppm concentration, respectively. The non-target organisms such as Gambusia affinis and Diplonychus indicus were not affected. Biopesticides are good alternatives to synthetic pesticides. PONNEEM can be effectively used for the management of human vector mosquitoes. Since it has a biodegradable nature and does not alter the environmental condition of water and soil.
- Published
- 2015
- Full Text
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