315 results on '"SINEO, L"'
Search Results
52. A Phylogenetic Analysis of Human Syntenies revealed by Chromosome Painting in Euarchontoglires Orders, Journal of Mammalian Evolution
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Picone, B., Masters, J., Silvestro, D., Sineo, L., and Delpero, Massimiliano
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- 2011
53. Ecology, morphometry, and genetics of the Palaeo-Mesolithic human remains of Grotta d’Oriente, Favignana (Italy). Atti del XVII Congresso dell’Associazione Antropologica Italiana
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Mannino, Marcello, Di Salvo, R., Schimmenti, V., Caramelli, D., Lalueza-Fox, Carles, Messina, A., Catalano, G., D'Amore, G., and Sineo, L.
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- 2007
54. Atti del XVII Congresso dell’Associazione Antropologica Italiana
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Mannino, Marcello, Di Salvo, R., Schimmenti, V., Messina, A., and Sineo, L.
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- 2007
55. Processi di domesticazione: un contributo dalle analisi del DNA mitocondriale (MTDNA) di antichi reperti scheletrici bovini (Bos primigenius 19.000 BP)
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Caramelli, D., Conti, S., Lari, M., Bozzi, R., Vernesi, C., Chiarelli, B., Boscato, P., Sineo, L., Giorgetti, A., Casoli, A., and Bertorelle, G.
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Bos primigenius ,mtDNA ,Bos taurus - Published
- 2005
56. Cytogenetics of the land snails Cantareus aspersus and C. mazzullii (Mollusca : Gastropoda : Pulmonata)
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Vitturi R. (1), Libertini A. (2), Sineo L. (1), Sparacio I. (1), Lannino A. (1), Gregorini A. (3), and Colomba M. (4)
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C. mazzullii ,land snails ,Cantareus aspersus ,cytogenetics - Abstract
A cytogenetic study was carried out on the chromosomes and nuclear DNA contents of the land snails Cantareus aspersus and C. mazzullii (Gastropoda: Pulmonata). Chromosomes were studied using Giemsa staining, banding methods and fluorescent in situ hybridization (FISH) with three repetitive DNA probes [18S rDNA, (GATA)n and (TTAGGG)n]. Results were very similar in the two species both showing (1) 54 bi-armed chromosomes [submetacentrics (SM) + metacentrics (M) + subtelocentrics (ST)]; (2) 10 terminal NORs after sequential application of rDNA FISH and silver staining; (3) uniform DNA fluorescence with CMA3 and DAPI staining and (4) genomic composition considerably enriched both in highly- and moderately-repeated DNAs. The telomeric (TTAGGG)n sequence hybridized with the termini of all of the chromosomes in the two species. In spite of their apparent karyological uniformity, flow cytometry DNA assays showed that C. aspersus and C. mazzullii are characterized by different nuclear DNA content (C values are 3.58 and 3.08 pg, respectively) and slightly different base composition in their genomes. Present data on GS and AT% in C. mazzullii and C. aspersus confirm the trend toward high GS values and GC percentages among land snails.
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- 2005
57. Possibili contributi dell’indagine biomolecolare in Archeologia: principi ed applicazioni
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Cappellini, E, Biella, MARIA CRISTINA, Chiarelli, B, Sineo, L, and Caramelli, D.
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DNA antico ,studi di genere ,Italia preromana - Published
- 2004
58. New data on Sicilian prehistoric and historic evolution in a mountain context, Vallone Inferno (Scillato, Italy)
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Història i Història de l'Art, Universitat Rovira i Virgili, Belvedere O, Pagano E, Morales J, Di Simone G, Alessi E, Virruso G, Sineo L, Scopelliti G, Rodriguez A, Picornell L, Messina A, Expósito I, Blain H, Arnone M, Angelucci D, Allué E, OLLÉ CAÑELLAS, ANDREU, López-García J, Martin P, Forgia V, VERGÈS BOSCH, JOSEP MARIA, BURJACHS CASAS, FRANCESC, Història i Història de l'Art, Universitat Rovira i Virgili, Belvedere O, Pagano E, Morales J, Di Simone G, Alessi E, Virruso G, Sineo L, Scopelliti G, Rodriguez A, Picornell L, Messina A, Expósito I, Blain H, Arnone M, Angelucci D, Allué E, OLLÉ CAÑELLAS, ANDREU, López-García J, Martin P, Forgia V, VERGÈS BOSCH, JOSEP MARIA, and BURJACHS CASAS, FRANCESC
- Published
- 2013
59. I resti umani della Grotta di S.Teodoro (Messina): datazione assoluta con il metodo della spettrometria gamma diretta (U/Pa)
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Sineo L., Bigazzi R., D'Amore G., Tartarelli G., Di Patti C., Berzero A., and Caramella Crespi V.
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- 2002
60. Chromosomal dynamics in platyrrhinea by mapping bacs probes
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Dumas, F., primary and Sineo, L., additional
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- 2012
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61. Bacteria, fungi and arthropod pests collected on modern human mummies
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Palla, F., primary, Sineo, L., additional, and Manachini, Barbara, additional
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- 2011
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62. Williams-Beuren mapping in Callithrix argentata, Callicebus cupreus and Alouatta caraya indicates different patterns of chromosomal rearrangements in neotropical primates
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Sineo, L., primary, Dumas, F., additional, Vitturi, R., additional, Picone, B., additional, Privitera, O., additional, and Stanyon, R., additional
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- 2007
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63. Repetitive DNAs in the slug Milax nigricans: association of ribosomal (18S–28S and 5S rDNA) and (TTAGGG)n telomeric sequences) in the slug M. nigricans (Mollusca: Gastropoda: Pulmonata)
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Vitturi, R, primary, Sineo, L, additional, Volpe, N, additional, Lannino, A, additional, and Colomba, M, additional
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- 2004
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64. Human Ecological Transitions in Ancient Sicily Analyzed by Bone Stress Markers.
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Messina, A. D., Miccichè, R., Carotenuto, G., and Sineo, L.
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ALVEOLAR process ,DISEASES ,QUALITY of life ,ARTHRITIS ,ALVEOLAR osteitis ,SURVIVAL analysis (Biometry) - Abstract
The article presents a study on human ecological transitions in Ancient Sicily in Italy through a comparative analysis of dento-alveolar lesions in the Tyrrhenian region. The study examined whether environmental and cultural parameters influenced the survival rates and quality of life of humans in the area. Also cited are the data studied, including the frequencies of arthritis, periostitis, and cribra orbitalia.
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- 2012
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65. Potenziali interventi di ingegneria genetica sull'uomo
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Sineo, L., primary
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- 1991
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66. Proposta di risoluzione del Parlamento Europeo sui problemi della manipolazione genetica
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Sineo, L., primary
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- 1990
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67. Etica della riproduzione e consulenza genetica: opinioni a confronto
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Sineo, L., primary
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- 1990
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68. Recensioni
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Sineo, L., primary
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- 1990
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69. Repetitive DNAs in the slug Milax nigricans: association of ribosomal (18S–28S and 5S rDNA) and (TTAGGG)n telomeric sequences) in the slug M. nigricans (Mollusca: Gastropoda: Pulmonata)
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Vitturi, R., Sineo, L., Volpe, N., Lannino, A., and Colomba, M.
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RIBOSOMES , *TELOMERES , *PULMONATA , *GASTROPODA - Abstract
Spermatocyte chromosomes of the slug Milax nigricans (Mollusca: Gastropoda: Pulmonata) were studied using silver staining (Ag-NOR) and fluorescent in situ hybridization (FISH) with four repetitive DNA probes [18S rDNA, 5S rDNA, (TTAGGG)n and (GATA)n]. Silver impregnation was inadequate to localize the chromosome sites of nucleolus organizer regions (NORs) since no silver dots occurred on the chromosomes at spermatogonial metaphase and a diffuse silver stainability could be observed on the bivalents at metaphase-I. Unlike silver staining, single-colour rDNA FISH consistently mapped major ribosomal sites (18S–28S rDNA) on two small-sized chromosomes in spermatogonial cells and on the correspondent metaphase-I bivalent in spermatocytes. While telomeric (TTAGGG)n sequence hybridized to all chromosomes, (GATA)n probe localized abundant hybridization sites, dispersed throughout the genome. Simultaneous double-colour FISH demonstrated a close chromosomal association of 18S–28S rDNA, 5S rDNA and (TTAGGG)n. [Copyright &y& Elsevier]
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- 2004
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70. Banded Karyotypes of the 44-Chromosome Gibbons.
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Stanyon, R., Sineo, L., Chiarelli, B., Camperio-Ciani, A., Haimoff, A.R., Mootnick, E.H., and Sutarman, Drh.
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- 1987
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71. Chromosomes of thecercopithecus aethiopsspecies group:C. aethiops(Linnaeus, 1758),C. cynosurus(Scopoli, 1786),C. pygerythrus(Cuvier, 1821), andC. sabaeus(Linnaeus, 1766)
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Sineo, L., Stanyon, R., and Chiarelli, B.
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The banded karyotypes of 34 monkeys of known geographic origin and belonging to the Cercopithecus aethiops group of species (C. aethiops, C. pygerythrus, C. cynosurus, C. sabaeus) show that chromosome evolution in this group is highly conservative. All species have 2n =60 chromosomes with very similar chromosome banding. However, differences were found both within and between species. A polymorphism of the NOR area of the “marked” chromosome pairs was found in all taxa (9 of 34 animals). All individuals referred toC. sabaeus,from both West Africa and the Barbados, are characterized by having highly positive G- and C- banded terminal sequences on chromosomes 7,10,12, and 14. Outgroup comparisons with other primates and a parsimony analysis suggest that these terminal bands are derived and are probably good taxonomic and phylogenetic indicators. Moreover, chromosome 18 is variable both between and within species in G banding and in short-arm length. The existence of within-species variation in karyotypes suggests that karyological comparisons must be based on adequate samples that include specimens coming from all the major geographic populations of the species concerned.
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- 1986
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72. Identificazione tassonomica di Aotus (Platyrrhinae) mediante la citogenetica.
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Dumas, F., Sineo, L., and Ishida, T.
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- 2015
73. Primate Cytogenetics and Comparative Genomics
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Sineo, Luca and Stanyon, Roscoe
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Biologia ,Biologia umana ,Antropologia ,Genetica ,Evoluzione ,Atti di convegno ,bic Book Industry Communication::M Medicine::MF Pre-clinical medicine: basic sciences::MFC Anatomy ,bic Book Industry Communication::M Medicine::MF Pre-clinical medicine: basic sciences::MFN Medical genetics ,bic Book Industry Communication::P Mathematics & science::PS Biology, life sciences::PSA Life sciences: general issues - Abstract
This volume is a collection of contributions of a Florentine post congress symposium on "Primate Cytogenetics and Comparative Genomics" held on occasion of the XX International Primatological Congress (Turin in 2004). Comparative Molecular Cytogenetics and Genomics are two rapidly expanding fields. Researchers from Italy, Germany, Spain, United States and Japan meet in Florence to discuss over a two day period recent advances and summarize the current state of the science.
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- 2006
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74. HUMAN PEOPLING OF SICILY DURING QUATERNARY
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SINEO, Luca, PETRUSO, Daria, FORGIA, Vincenza, Messina, A., D'Amore, G., Leonardo D. Fernandez, Sineo, L, Petruso, D., Forgia, V, Messina, D, D'Amore, G, Sineo, L., Forgia, V., Messina, A., and D'Amore, G.
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Settore BIO/08 - Antropologia ,Human migrations, Sicily, Quaternary, Anthropology, Archaeology - Abstract
The early human peopling of Sicily and Western Mediterranean shores is one of the debated topic in the archaeological and anthropological literature over the twentieth century. This discussion involves not only the specific issue of the peopling of the continental island, but fundamentally the reconstruction of human migration routes and dispersals across the Mediterranean area during Early and Middle Pleistocene. Even if the common route of faunal and human movement is considered from North, and relative to the Messina strait crossing, several authors, on the base of archaeological evidences, hypothesized an early peopling and an African provenance through the Sicilian Channel. This hypothesis has been mostly rejected even if diverse palaeontological and especially archaeological findings of Modus 1 and 2 artifacts from Southern Sicily renewed the attention to this issue. However most Sicilian archaeological evidences are spotty and frequently dubitative, as they lack of stratigraphic context. Direct anthropological data are scarce and relative only to the Upper Palaeolithic and indicate a H. sapiens migration from Italian mainland. Nevertheless, palaeontological and palaeogeographic data do not exclude the possibility of a Middle Pleistocene human peopling at least. Our different research fields helped us to face the problem through diverse perspectives, on the main intent of a critical revision of all the available data from palaeontology, archaeology, palaeogeography and physical anthropology. We propose a critic discussion of the industrial evidences, the georeference of lithic and faunal retrieval sites during Early and Middle Pleistocene and a tentative palaeogeographic reconstruction of Middle Pleistocene coastal lines of Sicily on the base of the georeferred sites. Furthermore, using cranial morphometry in a wide comparative analysis between Upper Palaeolithic Sicilian, European and African samples, we indicate the probable population relationship in Upper Palaeolithic and Mesolithic transition periods. Our results do not exclude the possibility of several sporadic human peopling related to the Messina Strait accessibility since the Middle Pleistocene. A pulsating trend of dispersal and extinction characterized humans in Sicily at least until Mesolithic transition.
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- 2015
75. Alia
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Chiarelli, Brunetto, Bigazzi, Renzo, and Sineo, Luca
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antropometria ,sicilia ,anthropometry ,evoluzione ,evolution ,sicily ,bic Book Industry Communication::J Society & social sciences::JH Sociology & anthropology::JHM Anthropology ,bic Book Industry Communication::P Mathematics & science::PS Biology, life sciences::PSX Human biology - Abstract
In the spring of 1995, during works for the rehabilitation of a wall that closed the grotto of the Old Cemetery in the Sicilian village of Alia, the skeletal remains of the victims of the cholera outbreak of 1837 that had been rapidly interred here were brought to light. From that moment on, the Alia project was developed without interruption, analysing the biological evolution of the local population by exploiting study methods characteristic of different anthropological disciplines, such as skeletal biology, population genetics and biodemography. The book renders account of research completed and in progress carried out by academics from the Universities of Florence, Palermo, Parma, Cagliari, Turin and Göttingen., Nella primavera del 1995, durante i lavori di risanamento al muro che chiudeva la grotta del Cimitero Vecchio del paese siciliano di Alia, erano tornati alla luce i resti scheletrici delle vittime dell'epidemia di colera del 1837, qui frettolosamente inumati. Da quel momento il progetto Alia si è sviluppato senza sosta, analizzando l'evoluzione biologica della popolazione aliese mediante le metodologie di studio tipiche di differenti discipline antropologiche quali la biologia scheletrica, la genetica di popolazione, la biodemografia. Il volume dà conto delle ricerche condotte e in corso da parte di studiosi delle Università di Firenze, Palermo, Parma, Cagliari, Torino e Göttingen.
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- 2002
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76. la domesticazione dei bovidi italiani: ipotesi suggerite dallo studio paleogenetico di antichi reperti di Bos primigenius
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CATALANO, G, LARI, M, PILLI, E, MILANI, L, BOSCATO, P, LALUEZA FOX, C, CARAMELLI, D., DI PATTI, Carolina, SINEO, Luca, CATALANO G, LARI M, PILLI E, MILANI L, BOSCATO P, DI PATTI C, SINEO L, LALUEZA-FOX C, CARAMELLI D, CATALANO, G, LARI, M, PILLI, E, MILANI, L, BOSCATO, P, DI PATTI, C, SINEO, L, LALUEZA-FOX, C, and CARAMELLI, D
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DOMESTICAZIONE, BOS PRIMIGENIUS, DNA ANTICO ,Settore BIO/08 - Antropologia - Published
- 2007
77. Museum primatological collections: a valuable source of ancient DNA
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CATALANO, G, CARAMELLI, D, SINEO, Luca, CATALANO G, CARAMELLI D, SINEO L, CATALANO, G, CARAMELLI, D, and SINEO, L
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Settore BIO/08 - Antropologia ,ANCIENT DNA, PRIMATOLOGICAL MUSEUM COLLECTION, PHYLOGENETIC STUDIES - Published
- 2007
78. Dedication
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STANYON R, SINEO, Luca, STANYON R., SINEO L., STANYON R, and SINEO L
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- 2006
79. Geochemistry of phosphatic nodules as a tool for understanding depositional and taphonomical settings in a paleolithic cave site (San teodoro, Sicily)
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Pierluigi Rosina, Renato Giarrusso, Angelo Mulone, Vittorio Garilli, Laura Bonfiglio, Mirko Andrea Vizzini, Luca Sineo, Valeria La Parola, Massimiliana Pinto Vraca, Gerlando Vita, Vita G., Garilli V., Vizzini M.A., Giarrusso R., Mulone A., Pinto Vraca M., La Parola V., Rosina P., Bonfiglio L., and Sineo L.
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geography ,geography.geographical_feature_category ,Variscite ,Geochemistry ,Geology ,Cave taphonomy ,Settore BIO/08 - Antropologia ,Sedimentary depositional environment ,Phosphate nodules ,Cave ,Paleolithic ,Guano ,Bat guano ,Earth-Surface Processes - Abstract
Interpreting depositional settings of cave sites is generally problematic, especially in absence of palaeontological/archaeological evidence. This is the case of some deposits at San Teodoro Cave (Sicily), a key site for the Mediterranean Palaeolithic. In a stratigraphic level interrupted by a carbonatic concretion, phosphatic nodules are present only in the part enclosed between the concretion and the cave wall. The discovery of these nodules combined with the punctual lack of fossils had initially suggested an erosion phenomenon and subsequent formation of nodules at a vadose level. Here we show the usefulness of an integrated, geochemical-palaeoecological approach in defining stratigraphy and palaeoenvironmental reconstructions. XRD, ICP-OES, ATR-FTIR and EDS analyses allowed the formulation of a new hypothesis regarding the origin of the nodules, the depositional dynamics, and the role played by the guano produced by an extensive colony of bats. The role of barium and rubidium in detecting taphonomical processes has been highlighted.
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- 2021
80. Petrographic characterization of quartzite tools from the Palaeolithic site of San Teodoro cave (Sicily): Study on the provenance of lithic raw materials
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Gerlando Vita, Vincenza Forgia, Massimiliana Pinto Vraca, Nunziatina Calabrese, Daniela Divita, Luca Sineo, Vita G., Forgia V., Pinto Vraca M., Calabrese N., Divita D., and Sineo L.
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Settore L-ANT/01 - Preistoria E Protostoria ,Archeology ,Lithic artefacts, Quartzite, Epigravettian, Palaeolithic, San Teodoro Cave ,Settore L-ANT/09 - Topografia Antica ,Settore GEO/01 - Paleontologia E Paleoecologia ,Settore BIO/08 - Antropologia ,Settore GEO/09 -Georis. Miner.e Appl.Mineral.-Petrogr. per l'Ambi.ed i B.Cult - Abstract
A petrographic characterization has been used here, for the first time, in the study of lithic raw materials exploited in prehistoric Sicily. Our research interests one of the oldest archaeological sites with evidence of the early human peopling of the island (∼15kyr ago): San Teodoro Cave, in northeastern Sicily. Two geological Formations, Numidian and Monte Soro Flysch gave origin to well-rounded pebbly quartzite elements scattered in the marine terraces surrounding the cave and likely exploited as one of the sources of the raw materials for the production of lithic tools by the Epigravettian communities having settled the place. The preference for one of the two qualities of quartzite is hypothesized thanks to the results of the petrographic analysis and a naked eye recognition of the differences between the two varieties of sandstone by the Epigravettian groups is also speculated.
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- 2022
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81. 'Cola u’ Nanu': an early nineteenth century case of disproportionate small stature
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R. Bianucci, L. Sineo, A. G. Nerlich, S. T. Donell, F. M. Galassi, Bianucci R, Sineo L, · Nerlich A G, · Donell ST, and ·Galassi FM
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short stature, Dwarfism, Genetic mutation, Dysplasia ,Art and history ,Endocrinology ,Endocrinology, Diabetes and Metabolism ,Mutation ,Humans ,Dwarfism ,Settore BIO/08 - Antropologia ,Sicily - Abstract
This report considers Cola “u’ Nanu” (Cola the Dwarf) (Fig. 1) who was depicted in 1840 by the famous nineteenth century Sicilian painter Michele Panebianco (1806–1873).
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- 2022
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82. Archaeogenetics and Landscape Dynamics in Sicily during the Holocene: A Review
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Giuseppe Bazan, Francesco Calì, Giulio Catalano, Valentino Romano, Luca Sineo, Romano V., Catalano G., Bazan G., Cali F., and Sineo L.
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Archaeogenetics ,past vegetation ,Geography, Planning and Development ,Population ,TJ807-830 ,Context (language use) ,Potential natural vegetation ,Management, Monitoring, Policy and Law ,TD194-195 ,Renewable energy sources ,paleobotany ,Prehistory ,Human settlement ,anthropology ,GE1-350 ,education ,ancient DNA ,education.field_of_study ,historical ecology ,Environmental effects of industries and plants ,Renewable Energy, Sustainability and the Environment ,population genetics ,Building and Construction ,Biodiversity hotspot ,Environmental sciences ,Geography ,Ethnology ,Mediterranean Islands ,Historical ecology - Abstract
The Mediterranean islands and their population history are of considerable importance to the interpretation of the population history of Europe as a whole. In this context, Sicily, because of its geographic position, represents a bridge between Africa, the Near East, and Europe that led to the stratification of settlements and admixture events. The genetic analysis of extant and ancient human samples has tried to reconstruct the population dynamics associated with the cultural and demographic changes that took place during the prehistory and history of Sicily. In turn, genetic, demographic and cultural changes need to be understood in the context of the environmental changes that took place over the Holocene. Based on this framework, this paper aims to discuss the cultural and demographic dimension of the island by reviewing archaeogenetic studies, and lastly, we discuss the ecological constraints related to human peopling in times of change in landscapes that occurred on the island in various periods. Finally, possible directions for future archaeogenetic studies of Sicily are discussed. Despite its long human history, Sicily is still one of the world’s biodiversity hotspots. The lessons we learn from the past use of landscape provide models for sustainable future management of the Mediterranean’s landscapes.
- Published
- 2021
83. Correspondence re Piombino-Mascali et al on Mummy Research, Ethics and Editorial Comments
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Simon T. Donell, Grazia Mattutino, Francesco M Galassi, Luca Sineo, Andreas G. Nerlich, Roberto Miccichè, Raffaella Bianucci, Bianucci R., Sineo L., Micciche R., Mattutino G., Nerlich A.G., Donell S.T., and Galassi F.M.
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Research ethics ,Anthropology ,Philosophy ,Correspondence ,Radiology, Nuclear Medicine and imaging ,Mummies ,Settore BIO/08 - Antropologia ,Classics ,Pathology and Forensic Medicine - Published
- 2021
84. Inferences on Sicilian Mesolithic subsistence patterns from cross-sectional geometry and entheseal changes
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Vitale S. Sparacello, Luca Sineo, Sébastien Villotte, Alessandra Varalli, Schimmenti, Mathilde Samsel, De la Préhistoire à l'Actuel : Culture, Environnement et Anthropologie (PACEA), Université de Bordeaux (UB)-Centre National de la Recherche Scientifique (CNRS), Dipartimento di Biologia Animale, Università de Palermo, Sparacello V.S., Samsel M., Villotte S., Varalli A., Schimmenti V., and Sineo L.
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Marine conservation ,010506 paleontology ,Archeology ,Pleistocene ,[SHS.ARCHEO]Humanities and Social Sciences/Archaeology and Prehistory ,[SHS.ANTHRO-BIO]Humanities and Social Sciences/Biological anthropology ,Settore BIO/08 - Antropologia ,01 natural sciences ,functional adaptations ,Functional adaptation ,0601 history and archaeology ,entheseal changes ,Bow and arrow ,Mesolithic ,0105 earth and related environmental sciences ,060102 archaeology ,Ecology ,Cross sectional geometry ,Subsistence agriculture ,Small sample ,06 humanities and the arts ,[SHS.ANTHRO-SE]Humanities and Social Sciences/Social Anthropology and ethnology ,[SDE.ES]Environmental Sciences/Environmental and Society ,language.human_language ,mobility ,Geography ,Entheseal change ,Anthropology ,language ,subsistence patterns ,Sicilian Mesolithic ,Sicilian ,cross-sectional geometry - Abstract
International audience; Using cross-sectional geometry (CSG), entheseal changes (ECs), and presence of external auditory meatus exostosis (EAE), this study tests hypothesis-bases on isotopic and zooarchaeological evidence-that in the Sicilian Mesolithic terrestrial rather than marine resources were predominantly exploited, in substantial continuity with previous Epigravettian hunters. Results show similarities in the general frequency of ECs-a rough proxy for overall activity-with Late Pleistocene hunters, in contrast with Mesolithic coastal foragers or Neolithic herders/farmers. Yet, CSG suggests that this possible continuity in the type of resources exploited was accompanied by a behavioral change, and in particular the abandonment of the throwing technology, possibly in favor of new tools such as traps and the bow and arrow. In fact, the dramatic decrease in humeral bilateral asymmetry documented at a European level with the Pleistocene-Holocene transition can be found also in the Sicilian Mesolithic. Results for the lower limb appear compatible with a certain degree of terrestrial mobility in a rugged environment. The frequency of EAE suggests that activities related to water were present but not common; however, their prominence is difficult to determine 2 given the small sample size. The pattern of information provided by the proxies for activity used here is complex and partially contrasting, but has the potential to integrate and enrich archaeological methods and biochemical approaches. This study corroborates a varied scenario of continuity and discontinuity in subsistence at the Pleistocene-Holocene transition, and highlights the importance of a regional bioarchaeological approach of human biological and behavioral adaptations.
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- 2020
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85. A mitogenome sequence of an Equus hydruntinus specimen from Late Quaternary site of San Teodoro Cave (Sicily, Italy)
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Gabriella Mangano, Alessandra Modi, Martina Lari, Giulio Catalano, Laura Bonfiglio, Luca Sineo, Catalano G., Modi A., Mangano G., Sineo L., Lari M., and Bonfiglio L.
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010506 paleontology ,Archeology ,010504 meteorology & atmospheric sciences ,Pleistocene ,Western Europe ,Settore BIO/08 - Antropologia ,01 natural sciences ,law.invention ,Equus hydruntinu ,San Teodoro Cave ,Quaternary ,Paleontology ,Glaciation ,Refugium (population biology) ,Cave ,Mitochondrial genome ,law ,Radiocarbon dating ,Glacial period ,Ecology, Evolution, Behavior and Systematics ,Holocene ,0105 earth and related environmental sciences ,Global and Planetary Change ,geography.geographical_feature_category ,Ancient DNA ,Geology ,LGM ,Geography - Abstract
Equus hydruntinus was a small equid that ranged from the Iberian Peninsula to Middle East. In Italy it has been considered present from the Middle Pleistocene to its extinction in the Middle-Late Holocene. E. hydruntinus shares plesiomorphic traits with other known Pleistocene equids. As a consequence, its classification has always been problematic. Genetic analyses on few fossil remains from Iran and Crimea have revealed that E. hydruntinus was more closely related to extant hemiones. To further investigate its systematic position, using target-enrichment capture and next-generation sequencing, we reconstructed a near complete mitogenome of a specimen from San Teodoro Cave from Sicily radiocarbon dated at 23-21 ka cal. BP. Comparisons with extant and extinct equids demonstrate close relationship between this specimen and the Asian wild asses, supporting previous genetic and morphological studies. Furthermore, our findings confirm the occurrence of E. hydruntinus species in Sicily, that presumably might have represented a typical glacial refugium during the LGM.
- Published
- 2020
86. Paleogenetic and morphometric analysis of a Mesolithic individual from Grotta d'Oriente: An oldest genetic legacy for the first modern humans in Sicily
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Giuseppe D'Amore, Luca Sineo, Sylvia Di Marco, David Caramelli, Martina Lari, Giulio Catalano, Alessandra Modi, Modi A., Catalano G., D'Amore G., Di Marco S., Lari M., Sineo L., and Caramelli D.
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010506 paleontology ,Archeology ,Lineage (genetic) ,010504 meteorology & atmospheric sciences ,Mesolithic hunter-gatherers ,Settore BIO/08 - Antropologia ,01 natural sciences ,Haplogroup ,Cave ,Morphometric analysis ,Sicily ,Ecology, Evolution, Behavior and Systematics ,Mesolithic ,0105 earth and related environmental sciences ,Global and Planetary Change ,geography ,geography.geographical_feature_category ,Ancient DNA ,Haplotype ,Geology ,Last Glacial Maximum ,Archaeology ,language.human_language ,Grotta d'Oriente ,language ,Sicilian - Abstract
Grotta d’Oriente, a coastal cave located on the island of Favignana (Sicily, Italy) is a key site for the study of the early human colonization of Sicily. Inside the cave, during different field excavations, three burials attributable to the Late Upper Palaeolithic and Mesolithic were found. The Mesolithic Oriente B individual, directly dated at 9,377 ± 25 uncal BP, was previously assigned to HV1 haplogroup using a traditional approach. However, it is well known that PCR based methods are prone to erroneous haplotype or haplogroup determination. In order to redefine the mitochondrial lineage of this Mesolithic hunter-gatherer and explore its phylogenetic position, we target-enriched and sequenced the complete mitochondrial genome of Oriente B. Moreover, we conducted a morphometric analysis to assess its phenetic affinities. Oriente B individual was classified into U2′3′4′7′8′9 haplogroup. In Sicily, this lineage has also been found on the Upper Palaeolithic Oriente C and Early Mesolithic individuals from Grotta dell’Uzzo. Our results show significant genetic and morphological similarities in Sicilian Early Mesolithic hunter-gatherers, presumably because of genetic drift processes. Furthermore, dating the emergence of the “Sicilian clade”, we speculate that Epigravettian hunter-gatherers carrying U2′3′4′7′8′9 haplogroup might be the first settlers of Sicily arrived from the Italian peninsula by the crossing of a temporary land-bridge around the Last Glacial Maximum.
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- 2020
87. New perspectives on the human occupation of the Gulf of Palermo during the Metal Ages: the funerary cave of Zubbio di Cozzo San Pietro (Bagheria) and the necropolis of Viale Venere (Mondello, Palermo)
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Roberto Miccichè, Giuseppina Battaglia, Marcello A. Mannino, Maria Giuseppa Scopelliti, Pietro Valenti, Luca Sineo, Vincenza Forgia, Battaglia G., Micciche R.M., Forgia V., Mannino M.A., Scopelliti M.G., Sineo L., and Valenti P.
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Bronze age ,010506 paleontology ,Archeology ,geography ,geography.geographical_feature_category ,060102 archaeology ,06 humanities and the arts ,Chalcolithic ,Settore BIO/08 - Antropologia ,Copper age ,01 natural sciences ,Archaeology ,Landscape archaeology ,Cave ,Bronze Age ,Anthropology ,Electricity grid ,Gulf of Palermo ,0601 history and archaeology ,Sicily ,0105 earth and related environmental sciences - Abstract
The Archaeological Superintendency of Palermo (Sicily), with the chair of Anthropology at the University of Palermo, carried out a preliminary investigation in the Zubbio of Cozzo San Pietro (Bagheria) – a cave known so far only from a speleological point of view - which proved to be a funerary cave dating to the Copper/Bronze Age. In the course of archaeological work during the installation of the electricity grid in the Mondello area (Palermo), part of a necropolis consisting of three oven-shaped tombs was exposed. The tombs multiple depositions, whose remains were found in a very bad state of preservation. Based on the type of funerary structures and the equipment found in them, we hypothesize the existence of a necropolis datable to the Early Copper Age that occupies a large area. After an articulated presentation of both necropolises, thanks to a multidisciplinary approach, an attempt was made to re-read all the elements available for a reconstruction of the Conca d’Oro (Palermo, Italy), during the metal ages.
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- 2020
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88. The genomic history of Southern Europe
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Richard Cottiaux, Eadaoin Harney, Iain Mathieson, Elizaveta Veselovskaya, Corinne Thevenet, Georgi Ganetsovski, Philipp W. Stockhammer, Petar Stanev, Douglas J. Kennett, Stefan Chohadzhiev, Adina Boroneanţ, Domenico Lo Vetro, Megan Michel, Nicholas J. Conard, Maleen Leppek, Fanica Veljanovska, Harald Meller, Martina Lari, Clive Bonsall, Michael Bolus, Thomas Higham, Andrej Starović, Darko Komšo, Mario Novak, Ivaylo Lozanov, Maja Čuka, Vanya Petrova, Krum Bacvarov, Alicja Budnik, Cosimo Posth, Cristian Virag, Stanislav Iliev, Wolfgang Haak, Francesca Candilio, Iñigo Olalde, Tamás Hajdu, David Caramelli, Raiko Krauß, Ivor Janković, Swapan Mallick, Matthew Ferry, Ben Krause-Kyora, Maria Teschler-Nicola, Kristin Stewardson, Cătălin Lazăr, Anastasia Papathanasiou, Giulio Catalano, Veneta Handzhyiska, Kendra Sirak, Kathrin Nägele, Kurt W. Alt, Bernard Gély, Ivor Karavanić, Svetlana Venelinova, Nedko Elenski, Dragana Antonović, Ron Pinhasi, Maria Malina, Inna Potekhina, Ivan Valchev, Alexey G. Nikitin, Kath McSweeney, Dusan Boric, Alissa Mittnik, Nick Patterson, Saskia Pfrengle, Angela Simalcsik, Anna Szécsényi-Nagy, Abigail Ash, Malcolm Lillie, Mario Šlaus, Fabio Martini, David Reich, Johannes Krause, Tamás Szeniczey, Bence Viola, Dženi Los, Luca Sineo, Hervé Bocherens, Christophe Cupillard, Yavor Boyadzhiev, Pavel Mirea, Sahra Talamo, Alexandra Kozak, Katerina Harvati, Songül Alpaslan-Roodenberg, Nasreen Broomandkhoshbacht, Marko Menđušić, Gunita Zariņa, Olivia Cheronet, Isil Kucukkalipci, Denise Keating, Dorothée G. Drucker, Stefan Alexandrov, Vladimir Slavchev, Radian Andreescu, Eppie R. Jones, Beatriz Gamarra, Michael Francken, Nadin Rohland, Gloria G. Fortes, Jonas Oppenheimer, Stefania Vai, T. Douglas Price, Sergey Vasilyev, Borislava Galabova, Krassimir Leshtakov, Bisserka Gaydarska, Mende Balázs Gusztáv, Joško Zaninović, Nadezhda Atanassova, Vyacheslav Moiseyev, Josip Burmaz, Daniel Fernandes, Steve Zäuner, Damian Labuda, Frédérique Valentin, Iain Mathieson, Songül Alpaslan-Roodenberg, Cosimo Posth, Anna Szécsényi-Nagy, Nadin Rohland1, Swapan Mallick, Iigo Olalde, Nasreen Broomandkhoshbacht, Francesca Candilio, Olivia Cheronet, Daniel Fernandes, Matthew Ferry, Beatriz Gamarra, Gloria González Fortes, Wolfgang Haak, Eadaoin Harney, Eppie Jones, Denise Keating, Ben Krause-Kyora, Isil Kucukkalipci, Megan Michel, Alissa Mittnik, Kathrin N.gele, Mario Novak, Jonas Oppenheimer, Nick Patterson, Saskia Pfrengle, Kendra Sirak, Kristin Stewardson, Stefania Vai, Stefan Alexandrov, Kurt W. Alt, Radian Andreescu, Dragana Antonovic′, Abigail Ash, Nadezhda Atanassova, Krum Bacvarov, Mende Balázs Gusztáv, Hervé Bocherens, Michael Bolus, Adina Boroneant., Yavor Boyadzhiev, Alicja Budnik, Josip Burmaz, Stefan Chohadzhiev, Nicholas J. Conard, Richard Cottiaux, Maja Cuka, Christophe Cupillard, Dorothée G. Drucker, Nedko Elenski, Michael Francken, Borislava Galabova, Georgi Ganetsovski, Bernard Gély, Tamás Hajdu, Veneta Handzhyiska, Katerina Harvati, Thomas Higham, Stanislav Iliev, Ivor Jankovic′, Ivor Karavanic, Douglas J. Kennett, Darko Komšo, Alexandra Kozak, Damian Labuda, Martina Lari, Catalin Lazar, Maleen Leppek, Krassimir Leshtakov, Domenico Lo Vetro, Dženi Los, Ivaylo Lozanov, Maria Malina, Fabio Martini, Kath McSweeney, Harald Meller, Marko Mendˉušic, Pavel Mirea, Vyacheslav Moiseyev, Vanya Petrova, T. Douglas Price, Angela Simalcsik, Luca Sineo, Mario Šlaus, Vladimir Slavchev, Petar Stanev, Andrej Starovic′, Tamás Szeniczey, Sahra Talamo, Maria Teschler-Nicola, Corinne Thevenet, Ivan Valchev, Frédérique Valentin, Sergey Vasilyev, Fanica Veljanovska, Svetlana Venelinova, Elizaveta Veselovskaya, Bence Viola, Cristian Virag, Joško Zaninovic′, Steve Zuner, Philipp W. Stockhammer, Giulio Catalano, Raiko Krau, David Caramelli, Gunita Zarin, Bisserka Gaydarska, Malcolm Lillie, Alexey G. Nikitin, Inna Potekhina, Anastasia Papathanasiou, Dušan Boric, Clive Bonsall, Johannes Krause, Ron Pinhasi, David Reich, Laboratoire Chrono-environnement - CNRS - UBFC (UMR 6249) (LCE), Centre National de la Recherche Scientifique (CNRS)-Université de Franche-Comté (UFC), Université Bourgogne Franche-Comté [COMUE] (UBFC)-Université Bourgogne Franche-Comté [COMUE] (UBFC), Mathieson I., Alpaslan-Roodenberg S., Posth C., Szecsenyi-Nagy A., Rohland N., Mallick S., Olalde I., Broomandkhoshbacht N., Candilio F., Cheronet O., Fernandes D., Ferry M., Gamarra B., Fortes G.G., Haak W., Harney E., Jones E., Keating D., Krause-Kyora B., Kucukkalipci I., Michel M., Mittnik A., Nagele K., Novak M., Oppenheimer J., Patterson N., Pfrengle S., Sirak K., Stewardson K., Vai S., Alexandrov S., Alt K.W., Andreescu R., Antonovic D., Ash A., Atanassova N., Bacvarov K., Gusztav M.B., Bocherens H., Bolus M., Boroneant A., Boyadzhiev Y., Budnik A., Burmaz J., Chohadzhiev S., Conard N.J., Cottiaux R., Cuka M., Cupillard C., Drucker D.G., Elenski N., Francken M., Galabova B., Ganetsovski G., Gely B., Hajdu T., Handzhyiska V., Harvati K., Higham T., Iliev S., Jankovic I., Karavanic I., Kennett D.J., Komso D., Kozak A., Labuda D., Lari M., Lazar C., Leppek M., Leshtakov K., Vetro D.L., Los D., Lozanov I., Malina M., Martini F., McSweeney K., Meller H., Mentusic M., Mirea P., Moiseyev V., Petrova V., Douglas Price T., Simalcsik A., Sineo L., Slaus M., Slavchev V., Stanev P., Starovic A., Szeniczey T., Talamo S., Teschler-Nicola M., Thevenet C., Valchev I., Valentin F., Vasilyev S., Veljanovska F., Venelinova S., Veselovskaya E., Viola B., Virag C., Zaninovic J., Zauner S., Stockhammer P.W., Catalano G., Krauss R., Caramelli D., Zarina G., Gaydarska B., Lillie M., Nikitin A.G., Potekhina I., Papathanasiou A., Boric D., Bonsall C., Krause J., Pinhasi R., Reich D., Université de Franche-Comté (UFC), and Université Bourgogne Franche-Comté [COMUE] (UBFC)-Université Bourgogne Franche-Comté [COMUE] (UBFC)-Centre National de la Recherche Scientifique (CNRS)
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0301 basic medicine ,Male ,History ,Steppe ,01 natural sciences ,genome wide ancient DNA ,0302 clinical medicine ,population dynamics ,ComputingMilieux_MISCELLANEOUS ,History, Ancient ,2. Zero hunger ,0303 health sciences ,education.field_of_study ,Multidisciplinary ,geography.geographical_feature_category ,Farmers ,Genome ,Agriculture ,Cline (biology) ,Genomics ,Grassland ,Europe ,Geography ,Western europe ,Ethnology ,Female ,southeastern Europe ,Human ,Archaeogenetics ,010506 paleontology ,Asia ,[SHS.ARCHEO]Humanities and Social Sciences/Archaeology and Prehistory ,Human Migration ,Population ,Settore BIO/08 - Antropologia ,Indigenous ,Article ,Ancient ,03 medical and health sciences ,genetic variation ,genomics ,prehistoric Europe ,prehistoric archeology ,bioarchaeology ,Bioarchaeology ,Genetics ,Humans ,HUMANISTIC SCIENCES. Archeology ,Farmer ,DNA, Ancient ,Sex Distribution ,education ,Mesolithic ,030304 developmental biology ,0105 earth and related environmental sciences ,HUMANISTIČKE ZNANOSTI. Arheologija ,Extramural ,business.industry ,Genome, Human ,Ambientale ,DNA ,Archaeology ,PRIRODNE ZNANOSTI. Biologija. Genetika, evolucija i filogenija ,030104 developmental biology ,Ancient DNA ,Genetics, Population ,Ancient DNA, Genomics, Southeastern Europe, Genetic Variation ,business ,NATURAL SCIENCES. Biology. Genetics, Evolution and Phylogenetics ,030217 neurology & neurosurgery - Abstract
Farming was first introduced to southeastern Europe in the mid-7th millennium BCE - brought by migrants from Anatolia who settled in the region before spreading throughout Europe. However, the dynamics of the interaction between the first farmers and the indigenous hunter-gatherers remain poorly understood because of the near absence of ancient DNA from the region. We report new genome-wide ancient DNA data from 204 individuals-65 Paleolithic and Mesolithic, 93 Neolithic, and 46 Copper, Bronze and Iron Age-who lived in southeastern Europe and surrounding regions between about 12,000 and 500 BCE. We document that the hunter-gatherer populations of southeastern Europe, the Baltic, and the North Pontic Steppe were distinctive from those of western Europe, with a West-East cline of ancestry. We show that the people who brought farming to Europe were not part of a single population, as early farmers from southern Greece are not descended from the Neolithic population of northwestern Anatolia that was ancestral to all other European farmers. The ancestors of the first farmers of northern and western Europe passed through southeastern Europe with limited admixture with local hunter-gatherers, but we show that some groups that remained in the region mixed extensively with local hunter-gatherers, with relatively sex-balanced admixture compared to the male-biased hunter-gatherer admixture that we show prevailed later in the North and West. After the spread of farming, southeastern Europe continued to be a nexus between East and West, with intermittent steppe ancestry, including in individuals from the Varna I cemetery and associated with the Cucuteni-Trypillian archaeological complex, up to 2,000 years before the Steppe migration that replaced much of northern Europe9s population.
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- 2018
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89. Distribution of Interstitial Telomeric Sequences in Primates and the Pygmy Tree Shrew (Scandentia)
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Odessa Schillaci, Luca Sineo, Sofia Mazzoleni, Francesca Dumas, Mazzoleni, S., Schillaci, O., Sineo, L., and Dumas, F.
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0301 basic medicine ,Peptide Nucleic Acids ,Primates ,Heterochromatin ,Tupaia ,Catarrhini ,Sequential C-band ,Chromosomal rearrangement ,03 medical and health sciences ,Genetic ,Telomeric repeat ,Genetics ,Animals ,Tupaia minor ,Molecular Biology ,Genetics (clinical) ,Phylogeny ,Synteny ,Chromosome rearrangement ,biology ,Phylogenetic tree ,Tupaiidae ,Telomere ,biology.organism_classification ,Scandentia ,Tupaia<%2Fitalic>%22"> ,Tupaia 030104 developmental biology - Abstract
It has been hypothesized that interstitial telomeric sequences (ITSs), i.e., repeated telomeric DNA sequences found at intrachromosomal sites in many vertebrates, could be correlated to chromosomal rearrangements and plasticity. To test this hypothesis, we hybridized a telomeric PNA probe through FISH on representative species of 2 primate infraorders, Strepsirrhini (Lemur catta, Otolemur garnettii, Nycticebus coucang) and Catarrhini (Erythrocebus patas, Cercopithecus petaurista, Chlorocebus aethiops, Colobus guereza), as well as on 1 species of the order Scandentia, Tupaia minor, used as an outgroup for primates in phylogenetic reconstructions. In almost all primate species analyzed, we found a telomeric pattern only. In Tupaia, the hybridization revealed many bright ITSs on at least 11 chromosome pairs, both biarmed and acrocentric. These ITS signals in Tupaia correspond to fusion points of ancestral human syntenic associations, but are also present in other chromosomes showing synteny to only a single human chromosome. This distribution pattern was compared to that of the heterochromatin regions detected through sequential C-banding performed after FISH. Our results in the analyzed species, compared with literature data on ITSs in primates, allowed us to discuss different mechanisms responsible for the origin and distribution of ITSs, supporting the correlation between rearrangements and ITSs.
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- 2017
90. Ancient and recent admixture layers in Sicily and Southern Italy trace multiple migration routes along the Mediterranean
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Alessio Boattini, Luca Pagani, Stefania Sarno, Luca Sineo, Guido Alberto Gnecchi Ruscone, Donata Luiselli, Marco Sazzini, Rosalba Petrilli, Ilia Mikerezi, Miguel G. Vilar, Chiara Barbieri, Eugenio Bortolini, Davide Pettener, Graziella Ciani, Elisabetta Cilli, Etienne Guichard, Spencer Wells, Sara De Fanti, Andrea Quagliariello, Sarno, S, Boattini, A, Pagani, L, Sazzini, M, De Fanti, S, Quagliariello, A, Gnecchi Ruscone, GA, Guichard, E, Ciani, G, Bortolini, E, Barbieri, C, Cilli, E, Petrilli, R, Mikerezi, I, Sineo, L, Vilar, M, Wells, S, Luiselli, D, Pettener, D, Sarno, Stefania, Boattini, Alessio, Pagani, Luca, Sazzini, Marco, De Fanti, Sara, Quagliariello, Andrea, Gnecchi Ruscone, Guido Alberto, Guichard, Etienne, Ciani, Graziella, Bortolini, Eugenio, Barbieri, Chiara, Cilli, Elisabetta, Petrilli, Rosalba, Mikerezi, Ilia, Sineo, Luca, Vilar, Miguel, Wells, Spencer, Luiselli, Donata, and Pettener, Davide
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0301 basic medicine ,Mediterranean climate ,Multidisciplinary ,Cultural history ,Southern Italy, Sicily, genomic ancestry, admxiture, Mediterranean populations ,Science ,Biological anthropology ,Settore BIO/08 - Antropologia ,Archaeology ,Article ,03 medical and health sciences ,030104 developmental biology ,Geography ,DNA, Sicily, Southern Italy, Migration routes, Genotyping ,Medicine ,Population diversity ,Genetic variation - Abstract
The Mediterranean shores stretching between Sicily, Southern Italy and the Southern Balkans witnessed a long series of migration processes and cultural exchanges. Accordingly, present-day population diversity is composed by multiple genetic layers, which make the deciphering of different ancestral and historical contributes particularly challenging. We address this issue by genotyping 511 samples from 23 populations of Sicily, Southern Italy, Greece and Albania with the Illumina GenoChip Array, also including new samples from Albanian-and Greek-speaking ethno-linguistic minorities of Southern Italy. Our results reveal a shared Mediterranean genetic continuity, extending from Sicily to Cyprus, where Southern Italian populations appear genetically closer to Greek-speaking islands than to continental Greece. Besides a predominant Neolithic background, we identify traces of Post-Neolithic Levantine-and Caucasus-related ancestries, compatible with maritime Bronze-Age migrations. We argue that these results may have important implications in the cultural history of Europe, such as in the diffusion of some Indo-European languages. Instead, recent historical expansions from North-Eastern Europe account for the observed differentiation of present-day continental Southern Balkan groups. Patterns of IBD-sharing directly reconnect Albanian-speaking Arbereshe with a recent Balkan-source origin, while Greek-speaking communities of Southern Italy cluster with their Italian-speaking neighbours suggesting a long-term history of presence in Southern Italy., This study was supported by the Genographic Project 2.0 (Geno 2.0) Scientific Research Grant 4–13 and by the European Research Council ERC-2011-AdG 295733 grant (Langelin).
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- 2017
91. The evolutionary history of HSA7/16 synteny in vertebrates: a critical interpretation of comparative cytogenetic and genome sequence data
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Luca Sineo, Barbara Picone, Picone, B, and Sineo, L
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Whole genome sequencing ,Genetics ,medicine.medical_specialty ,Human chromosome 7, Evolution, in silico analysis ,Phylogenetic tree ,In silico ,Cytogenetics ,Vertebrate ,Settore BIO/08 - Antropologia ,Biology ,Genome ,Homology (biology) ,Evolutionary biology ,biology.animal ,medicine ,General Agricultural and Biological Sciences ,Synteny - Abstract
The current work is an in silico study of data from previous publications and genome browsers, on the origin of the human synteny HSA7a/16p. The molecular composition of the chromosomal segments identified as HSA7a/16 and 7b (free or differently associated) is not yet clear. This means that a syntenic association 7/16, which can be detected by an in situ hybridization (FISH) method in different taxa, may not necessarily correspond to those of the same association in different lineages. In silico research, together with comparative cytogenetics, have been applied in order to define the composition of the 7/16 syntenic association. These results allow a confident reconstruction of the syntenic associations HSA7/16 in diverse vertebrate lineages, indicating various levels of homology, but also considerable levels of non-homology, which should elicit caution with phylogenetic interpretations. The 7/16 association represents a paradigmatic example of the complexity involved in the interpretation of comparative cytogenetic data from a phylogenetic perspective.
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- 2013
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92. The utility of 3D medical imaging techniques for obtaining a reliable differential diagnosis of metastatic cancer in an Iron Age skull
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G Carotenuto, Roberto Miccichè, Luca Sineo, Micciche', R., Carotenuto, G., and Sineo, L.
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Adult ,Archeology ,Pathology ,medicine.medical_specialty ,Paleopathology ,Palaeopathology, Osteolytic lesions, 3D imaging, Differential diagnosis, Metastatic carcinoma ,Context (language use) ,Bone Neoplasms ,Settore BIO/08 - Antropologia ,030218 nuclear medicine & medical imaging ,Pathology and Forensic Medicine ,Metastatic carcinoma ,Diagnosis, Differential ,03 medical and health sciences ,0302 clinical medicine ,Imaging, Three-Dimensional ,Image Interpretation, Computer-Assisted ,Medical imaging ,medicine ,Humans ,0601 history and archaeology ,Neoplasm Metastasis ,History, Ancient ,060101 anthropology ,business.industry ,Fossils ,Carcinoma ,Skull ,Cancer ,06 humanities and the arts ,medicine.disease ,medicine.anatomical_structure ,Female ,Differential diagnosis ,Breast carcinoma ,business ,Tomography, X-Ray Computed - Abstract
In this report we present a case of neoplastic disease affecting an Iron Age skull that provides some of the earliest evidence of metastatic cancer (MC) in Western Europe. The cranium comes from the indigenous site of Baucina (Palermo, Sicily) and was recovered in a multiple burial context dated to the 6th–5th centuries BCE. The skull was attributed to an adult female and was characterized by numerous perforating lytic lesions. CT and 3D imaging analyses were crucial for obtaining a diagnosis of MC. Based on the morphology of the lytic lesions and the biological profile of our specimen, we can tentatively suggest breast carcinoma as the primary origin of the clinical manifestations recorded on the skull. This work also highlights the importance of utilizing an analytical approach to paleopathology that incorporates up-to-date CT and 3D imaging techniques.
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- 2016
93. Chromosomal distribution of interstitial telomeric sequences in nine neotropical primates (Platyrrhini): possible implications in evolution and phylogeny
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Helenia Cuttaia, Francesca Dumas, Luca Sineo, Dumas, F., Cuttaia, H., and Sineo, L.
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0301 basic medicine ,owl monkey ,Chromosomes ,genome evolution ,owl monkeys ,phylogeny ,telomeric sequences ,Ecology, Evolution, Behavior and Systematics ,Molecular Biology ,Animal Science and Zoology ,Genetics ,Zoology ,Platyrrhini ,Atelidae ,Settore BIO/08 - Antropologia ,Chromosome ,03 medical and health sciences ,Cebidae ,Aotus lemurinus griseimembra ,Aotus nancymaae ,telomeric sequence ,biology ,Saimiri sciureus ,biology.organism_classification ,Molecular biology ,Callithrix ,Saguinus oedipus ,Ecology, Evolution, Behavior and Systematic ,030104 developmental biology - Abstract
To localize interstitial telomeric sequences (ITSs) and to test whether their pattern of distribution could be linked to chromosomal evolution, we hybridized telomeric sequence probes (peptide nucleic acid, PNA) on metaphases of New World monkeys: Callithrix argentata, Callithrix jacchus, Cebuella pygmaea, Saguinus oedipus, Saimiri sciureus, Aotus lemurinus griseimembra, Aotus nancymaae (Cebidae), Lagothrix lagotricha (Atelidae) and Callicebus moloch (Pithecidae), characterized by a rapid radiation and a high rate of chromosomal rearrangements. Our analysis of the probe signal localization allowed us to show in all the species analysed, as normally, the telomeric location at the terminal ends of chromosomes and unexpected signal distributions in some species. Indeed, in three species among the nine studied, Aotus lemurinus griseimembra, Aotus nancymaae (Cebidae) and Lagothrix lagotricha (Atelidae), we showed a high variability in terms of localization and degree of amplification of interstitial telomeric sequences, especially for the ones found at centromeric or pericentromeric positions (het-ITS). A comparative analysis, between species, of homologous chromosomes to human syntenies, on which we have found positive interspersed PNA signals, allowed us to explain the observed pattern of ITS distribution as results of chromosomal rearrangements in the neotropical primates analysed. This evidence permitted us to discuss the possible implication of ITSs as phylogenetic markers for closely related species. Moreover, reviewing previous literature data of ITSs distribution in Primates and in the light of our results, we suggest an underestimation of ITSs and highlight the importance of the molecular cytogenetics approach in characterizing ITSs, which role is still not clarified. Riassunto La distribuzione delle sequenze telomeriche intersperse sui cromosomi di nove Platyrrhinae: possibili implicazioni evolutive e filogenetiche Al fine di localizzare le sequence telomeriche intersperse (ITS) e verificare se il loro pattern di distribuzione e ricollegabile all'evoluzione cromosomica sono state ibridate sonde telomeriche (TTAGGG)n sulle metafasi di specie Platyrrhinae caratterizzate da una rapida radiazione ed da un alto tasso di riarrangiamenti cromosomomici: Callithrix argentata, Callithrix jacchus, Cebuella pygmaea, Saguinus oedipus, Saimiri sciureus, Aotus lemurinus griseimembra, Aotus nancymaae (Cebidae), Lagothrix lagotricha (Atelidae), e Callicebus moloch (Pithecidae). L'analisi del segnale della sonda PNA mappato sui cromosomi ha permesso di dimostrare, in tutte le specie, come atteso, la normale localizzazione delle sequenze telomeriche sulle estremita terminali dei cromosomi e solo su alcune di esse, invece, una distribuzione peculiare delle sequenze telomeriche intersperse. Infatti in tre specie tra le nove analizzate Aotus lemurinus griseimembra, Aotus nancymaae (Cebidae), e Lagothrix lagotricha (Atelidae) e stata dimostrata un'alta variabilita nella distribuzione e nel grado di amplificazione delle ITS, in special modo per quelle riscontrate in regioni centro o pericentromeriche (het-ITS). L'analisi comparativa dei cromosomi delle specie in esame, omologhi alle sintenie cromosomiche umane, sui quali si sono riscontrati segnali della sonda PNA interspersi, ha permesso di spiegare il pattern di distribuzione delle ITS osservato come risultato di riarrangiamenti cromosomici verificatesi nel corso dell'evoluzione in Primates, in particolar modo in Platyrrhinae. Queste evidenze hanno inoltre permesso di discutere le possibili implicazioni delle ITS come marker filogenetici. In ultimo, da un'analisi dei dati presenti in letteratura sulla distribuzione delle ITS in Primates ed alla luce dei risultati ottenuti si ipotizza che gli ITS possano essere stati sottostimati e si evidenzia l'importanza dell'approccio citogenetico nello studio degli ITS, sequenze il cui ruolo e ancora poco conosciuto e che meriterebbe maggiori approfondimenti.
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- 2016
94. Characterization of the bacterial community isolated from a High Middle Age soil sample dated since 980 AD
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A. Vassallo, G. Chiaramonte, M. Gallo, A. Palumbo Piccionello, C. Aleo Nero, G. Gallo, BALDI, FRANCO, L. Sineo, A. M. Puglia, Vassallo, A., Chiaramonte, G., Gallo, M., Palumbo Piccionello, A., Aleo Nero, C., Gallo, G., Baldi, F., Sineo, L., and Puglia, A.
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Paleomicrobiology, ancient samples, bacterial community, antibiotics, secreted proteases ,Settore BIO/19 - Microbiologia Generale - Published
- 2016
95. Bacteria, fungi and arthropod pests collected on modern human mummies
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Barbara Manachini, Luca Sineo, Franco Palla, Palla, F, Sineo, L, and Manachini, BRI
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Ecology ,biology ,Settore BIO/11 - Biologia Molecolare ,Settore BIO/08 - Antropologia ,biology.organism_classification ,biodeteriogens, biocenosis, conservation biology, hypogeic site ,DNA extraction ,Settore AGR/11 - Entomologia Generale E Applicata ,Taxon ,Insect Science ,lcsh:Zoology ,Identification (biology) ,Arthropod ,lcsh:QL1-991 ,Ecology, Evolution, Behavior and Systematics ,Bacteria - Abstract
A survey of opportunistic biocenosis (macro and micro organisms) associated with a rest of human mummy samples was carried out to characterise the biocenosis and to detect the potential of biodeteriogens. The rests of the human modern mummies come from a hypogeic site. Since mummies are relevant from a historic-artistic-scientific point of view, an aspect of this study was the identification and characterization of the biological systems related with biodeterioration of organic matter. In a first step, different sampling methods, according to the taxa, were applied. Technological procedures were combined in order to have an interdisciplinary approach to the conservation actions for testing future restoration protocols. Specimens were collected, identified and characterized by Microscopy (light, SEM, CLSM) and molecular analyses (DNA extraction, in vitro target sequence amplification, sequencing, sequence analysis). The results highlight a rather complex biocenonsis consisting of fungi, cyanobacteria, several insects and other arthropods.
- Published
- 2011
96. A Phylogenetic Analysis of Human Syntenies Revealed by Chromosome Painting in Euarchontoglires Orders
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Luca Sineo, Daniele Silvestro, Massimiliano Delpero, Barbara Picone, Judith C. Masters, Picone, B, Masters, J, Silvestro, D, Sineo, L, and DelPero, M
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Genetics ,biology ,Phylogenetic tree ,Glires ,Settore BIO/08 - Antropologia ,biology.organism_classification ,Maximum parsimony ,Scandentia ,Euarchontoglires ,Phylogenetic Pattern ,Euarchonta, Glires, Maximum parsimony, Bayesian inference, Zoo-FISH ,Euarchonta ,Clade ,Ecology, Evolution, Behavior and Systematics - Abstract
To search for cytogenetic signatures that can help to clarify evolutionary affinities among the five orders within the Euarchontoglires clade, we focused on associations of conserved syntenic blocks that have been accumulated in the karyotypes of Primates (Strepsirhini and Haplorhini), five families of Rodentia, Scandentia (Tupaia belangeri), Dermoptera (Galeopterus variegatus) and Lagomorpha (Oryctolagus cuniculus). We examined available chromosome painting data to identify conserved chromosomes and chromosomal segments, and syntenic associations likely to have characterized the ancestral eutherian karyotype. The data set includes 161 characters that have been subjected to a concatenated analysis using maximum parsimony (MP) and Bayesian inference (BI). The phylogenetic pattern recovered is generally consistent with reconstructions based on molecular and morphological data (particularly with respect to higher systematic groupings), but there are several anomalies (e.g., in the position of the lagomorphs). Both MP and BI topologies have weak statistical support, as a consequence of the high number of autapomorphic and homoplastic character states that have evolved during the history of the clade. The vast majority of derived associations are located on the terminal portions of the branches, and very few can be identified to support deeper divergences in the tree, indicating that chromosomal structures are far more fluid that was previously recognized. The high levels of homoplasy reflected in our data suggest that the number of possible syntenic character states is limited by chromosomal structures, and the same associations occur repeatedly.
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- 2010
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97. Early human peopling of Sicily: Evidence from the Mesolithic skeletal remains from Grotta d'Oriente
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Andrea Dario Messina, Sylvia Di Marco, Giuseppe D'Amore, Rosaria Di Salvo, Luca Sineo, D'Amore, G, Di Marco, S, Di Salvo, R, Messina, AD, and Sineo, L
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PALEOANTHROPOLOGY, MORPHOMETRY, SICILY, MESOLITHIC SKELETON, SICILIAN MESOLITHIC, CRANIOFACIAL MORPHOMETRY, MULTIVARIATE STATISTICS ,Adult ,Gene Flow ,Aging ,Cephalometry ,Physiology ,Epidemiology ,Settore BIO/08 - Antropologia ,Bone and Bones ,Bronze Age ,Genetics ,Humans ,Sicily ,Phylogeny ,Mesolithic ,Holocene ,Adult female ,Fossils ,Public Health, Environmental and Occupational Health ,Emigration and Immigration ,Biological Evolution ,Archaeology ,language.human_language ,Geography ,language ,Female ,Sicilian - Abstract
The site of Grotta d'Oriente, Island of Favignana, Sicily has yielded the complete skeleton of an adult female (OB) dated to the Mesolithic age. The cranial morphometry of this individual can provide us with some useful information about the peopling of Sicily in the Early Holocene period.Morphological affinities of OB and other Sicilian Mesolithic specimens were assessed to verify hypotheses concerning the early peopling of Sicily.Craniofacial metric data were employed in a comparative analysis with European Upper Palaeolithic (UP), Mesolithic, Neolithic, and Copper/Bronze age samples, and contemporary Italians. Both a model-free and a model-bound approach were used not only to calculate craniometric distances, but also to assess the role played by gene flow and drift to produce the resulting pattern of variations and relationships.A Sicilian Mesolithic (SM) sample, including OB, resulted morphologically very close to an Italian Late UP comparative group. A general similarity among Western/Central European UP and Mesolithic groups was also detected.Intense gene flow among hunter-gatherer populations accounts for close resemblances among various UP and Mesolithic groups. The beginning of a regional characterization is suggested by the morphological similarity between Italian Late UP and SM, and by decreasing gene flow among populations during the transition from the Upper Palaeolithic to the Mesolithic period.
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- 2010
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98. 19th Meeting of the Italian Primatological Association
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Francesco Scalfari, Renzo Bigazzi, Luca Sineo, Cecilia Veracini, SCALFARI, F, BIGAZZI, R, SINEO, L, and VERACINI, C
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Disturbance (geology) ,Scale (ratio) ,biology ,Ecology ,Settore BIO/08 - Antropologia ,biology.organism_classification ,Tanzania ,Habitat ,Abundance (ecology) ,Primatology, Italy, National Congress ,biology.animal ,Environmental science ,Animal Science and Zoology ,Primate ,Ecology, Evolution, Behavior and Systematics - Published
- 2009
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99. Exploring Evolution in Ceboidea (Platyrrhini, Primates) by Williams-Beuren Probe (HSA 7q11.23) Chromosome Mapping
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F. Bigoni, Orsola Privitera, Barbara Picone, Antonella Lannino, Roscoe Stanyon, Francesca Dumas, Luca Sineo, PICONE, B, DUMAS, F, STANYON, R, LANNINO, A, BIGONI, F, PRIVITERA, O, and SINEO, L
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Genetics ,medicine.diagnostic_test ,Phylogenetic tree ,Chromosome Mapping ,Chromosome ,Karyotype ,Platyrrhini ,Settore BIO/08 - Antropologia ,Biology ,biology.organism_classification ,Biological Evolution ,Atelinae ,MOLECULAR CYTOGENETICS, PRIMATES, EVOLUTION, WILLIAMS SYNDROME LOCUS, NEOTROPICAL MONKEYS, SYNTENY 7, FLUORESCENCE IN SITU HYBRIDISATION, PHYLOGENY ,Phylogenetics ,Cebidae ,medicine ,Animals ,Animal Science and Zoology ,Ecology, Evolution, Behavior and Systematics ,Fluorescence in situ hybridization ,Synteny - Abstract
The ancestral platyrrhine karyotype was characterised by a syntenic association of human 5 and a small segment of human 7 orthologues. This large syntenic association has undergone numerous rearrangements in various phylogenetic lines. We used a locus-specific molecular cytogenetic approach to study the chromosomal evolution of the human 7q11.23 orthologous sequences (William-Beuren syndrome, WS) in various Ceboidea (Platyrrhini) species. The fluorescent in situ hybridisation of the WS probe revealed a two-way pattern of chromosomal organisation that suggests various evolutionary scenarios. The first pattern (seen in Callimico and Saimiri ) includes a fairly simple disruption of the 7/5 syntenic association by a chromosome fission. The second pattern (seen in Atelinae, Alouattinae and in Callicebus ) is characterised by an increasing complexity in the 7/5 association as a consequence of a series of inversions and translocations resulting in different syntenic associations. These data support recent proposals for phylogenomic groupings of New World monkeys. The study also illustrates how single-locus probe hybridisations can reveal intrachromosomal rearrangements.
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- 2008
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100. Primi dati zooarcheologici dal santuario della Malophoros a Selinunte (TP). Firts Results from the Archaeozoological Study at the Sanctuary of Malophoros in Selinunte (TP)
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MICCICHE', ROBERTO MARIA, SINEO, Luca, Valenti, P., Miccichè, R., Valenti, P., and Sineo, L.
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sacrifici ,archeozoologia ,archaeozoology ,Malophoro ,sacrefice ,Settore BIO/08 - Antropologia ,Selinunte - Abstract
Gli aspetti religiosi ricoprivano un ruolo essenziale nella vita degli antichi greci. Tale ritualità si esprimeva attra- verso un’articolazione multiforme e diversif icata, spesso di diff icile lettura per gli archeologi. Tuttavia, è possibile identif icare all’interno di queste pratiche religiose un denominatore comune nella presenza degli animali come principale offerta sacrif icale. Il presente lavoro riguarda i primi dati zooarcheologici provenienti dalle recenti ricerche che hanno interessato l’area del santuario della Malophoros a Selinunte. La nostra indagine si pone come obiettivo principale l’esplora- zione delle modalità sacrif icali utilizzate dagli antichi frequentatori del santuario, ponendo particolare attenzione su tutti quegli elementi tafonomici riferibili ad un particolare trattamento subito dall’animale a scopo rituale. Le analisi f ino ad ora effettuate hanno riguardato un totale di 2299 resti faunistici di cui 805 attribuiti a livello specif ico. L’analisi incrociata dei reperti combusti e della distribuzione dei diversi elementi anatomici all’interno del campione ha mostrato che durante i riti che prevedevano la combustione dell’animale veniva preferita una particolare porzione: la coscia o le sue ossa. Sebbene si tratti di dati preliminari, le informazioni provenienti dallo studio delle faune sembrerebbero evidenzia- re la presenza di diversi utilizzi dell’animale a scopo rituale (olocausto, moirocausto, θυσία) che ben si accorda con la generale complessa articolazione del santuario selinuntino. Rituals played an essential role in the life of the ancient Greeks. These rituals were often expressed through multifaceted and diverse ways that are often diff icult to read in the archaeological record. However, it is possible to identify a common denominator in the use of animals as the main sacrif icial offering within these religious practices. We are presenting here the f irst zooarchaeology data from recent excavations in the area of the sanctuary of Malophoros at Selinunte. The main aim of our investigation, which is still ongoing, is the exploration of ancient sacrif icial rituals. We are paying particular attention to taphonomic aspects that are indicative of any specif ic treatment of animals for ritual purposes. The analysis carried out has included a total of 2,299 animal remains, of which 805 are attributed to species level. The combined analysis of burnt remains and that of the distribution of body parts showed that the preferred part offered to some deities was the thigh bone. The preliminary results of our data seem to highlight the presence of different uses of the animals for ritual purposes (holocaust, moirocaust, θυσία). The evidence is consistent with the articulation of the sanctuary.
- Published
- 2015
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