3,120 results on '"Ramoplanin"'
Search Results
52. Complexation of Peptidoglycan Intermediates by the Lipoglycodepsipeptide Antibiotic Ramoplanin: Structural Requirements for Intermolecular Complexation and Fibril Formation
- Author
-
Cudic, Predrag, primary, Kranz, James, additional, Behenna, Douglas C., additional, Kruger, Ryan G., additional, Wand, A. Joshua, additional, and McCafferty, Dewey G., additional
- Published
- 2001
- Full Text
- View/download PDF
53. Synthesis and Preliminary Biological Characterization of New Semisynthetic Derivatives of Ramoplanin
- Author
-
Anna Checchia, Matteo Giannone, Gianbattista Panzone, Augusto Canavesi, Romeo Ciabatti, Franca Castiglione, Gianpaolo Candiani, Sonia I. Maffioli, Elena Michelucci, Paolo Simone Tiseni, Cristina Brunati, Ettore Marzorati, Daniela Jabes, and Gabriella Romano more...
- Subjects
Staphylococcus aureus ,Antifungal Agents ,Streptococcus pyogenes ,medicine.drug_class ,Antibiotics ,Microbial Sensitivity Tests ,Hemolysis ,Bacterial cell structure ,Structure-Activity Relationship ,Depsipeptides ,Candida albicans ,Drug Discovery ,Enterococcus faecalis ,medicine ,Animals ,chemistry.chemical_classification ,Depsipeptide ,Chemistry ,Fatty acid ,Stereoisomerism ,Ramoplanin ,Antimicrobial ,Glycopeptide ,Cyclic peptide ,Anti-Bacterial Agents ,Rats ,Biochemistry ,Molecular Medicine ,medicine.drug - Abstract
Ramoplanin is a glycolipodepsipeptide antibiotic active against Gram-positive bacteria including vancomycin-resistant enterococci. Ramoplanin inhibits bacterial cell wall biosynthesis by a mechanism different from that of glycopeptides and hence does not show cross-resistance with these antibiotics. The systemic use of ramoplanin has been so far prevented because of its low local tolerability when injected intravenously. To overcome this problem, the fatty acid side chain of ramoplanin was selectively removed and replaced with a variety of different carboxylic acids. Many of the new ramoplanin derivatives showed antimicrobial activity similar to that of the natural precursor coupled with a significantly improved local tolerability. Among them the derivative in which the 2-methylphenylacetic acid has replaced the di-unsaturated fatty acid side chain (48) was selected as the most interesting compound and submitted to further in vitro and in vivo characterization studies. more...
- Published
- 2007
- Full Text
- View/download PDF
54. Investigation of halogenation during the biosynthesis of ramoplanin in Actinoplanes sp. ATCC33076
- Author
-
Wang Yuanxi, Huimin Lin, Lei Shao, Min Su, Jun-Sheng Chen, and Daijie Chen
- Subjects
inorganic chemicals ,Halogenation ,Stereochemistry ,Mutant ,Gene Expression ,Biology ,010402 general chemistry ,01 natural sciences ,Applied Microbiology and Biotechnology ,Peptides, Cyclic ,chemistry.chemical_compound ,Gene Knockout Techniques ,Biosynthesis ,Depsipeptides ,medicine ,Homologous Recombination ,Depsipeptide ,chemistry.chemical_classification ,010405 organic chemistry ,Genetic Complementation Test ,Lipopeptide ,Micromonosporaceae ,General Medicine ,Ramoplanin ,0104 chemical sciences ,Anti-Bacterial Agents ,Enzyme ,chemistry ,Biochemistry ,Heterologous expression ,Chlorine ,Biotechnology ,medicine.drug - Abstract
Ramoplanin and enduracidin are lipopeptide antibiotics effective against Gram-positive pathogens, which share close similarity in structure and biosynthetic pathway. Both compounds have chlorine atoms attached to 4-hydroxyphenylglycine (Hpg) but with different chlorinating sites and levels. Here, to probe the factor affecting the site and level of halogenation, gene inactivation and heterologous expression were carried out in Actinoplanes sp. ATCC33076 by homologous recombination. Metabolite analysis confirmed that ram20 encodes the only halogenase in ramoplanin biosynthetic pathway, and enduracidin halogenase End30 could heterologously complement the ram20-deficient mutant. Additionally, the mannosyltransferase-deficient mutant produces a dichlorinated ramoplanin aglycone with the halogenation site at Hpg(13). This study has refined our understanding of how halogenation occurs in ramoplanin biosynthetic pathway, and lays the foundation for further exploitation of ramoplanin and enduracidin halogenase in combinatorial biosynthesis. more...
- Published
- 2015
55. Network analysis of S. aureus response to ramoplanin reveals modules for virulence factors and resistance mechanisms and characteristic novel genes
- Author
-
Jeyakumar Natarajan and Devika Subramanian
- Subjects
Staphylococcus aureus ,Virulence Factors ,Gene regulatory network ,Virulence ,Human pathogen ,Biology ,medicine.disease_cause ,Virulence factor ,Microbiology ,Anti-Infective Agents ,Depsipeptides ,Drug Resistance, Bacterial ,Genetics ,medicine ,Gene ,Microarray analysis techniques ,General Medicine ,Ramoplanin ,Gene Expression Regulation, Bacterial ,Genes, Bacterial ,Transcriptome ,Metabolic Networks and Pathways ,medicine.drug - Abstract
Staphylococcus aureus is a major human pathogen and ramoplanin is an antimicrobial attributed for effective treatment. The goal of this study was to examine the transcriptomic profiles of ramoplanin sensitive and resistant S. aureus to identify putative modules responsible for virulence and resistance-mechanisms and its characteristic novel genes. The dysregulated genes were used to reconstruct protein functional association networks for virulence-factors and resistance-mechanisms individually. Strong link between metabolic-pathways and development of virulence/resistance is suggested. We identified 15 putative modules of virulence factors. Six hypothetical genes were annotated with novel virulence activity among which SACOL0281 was discovered to be an essential virulence factor EsaD. The roles of MazEF toxin-antitoxin system, SACOL0202/SACOL0201 two-component system and that of amino-sugar and nucleotide-sugar metabolism in virulence are also suggested. In addition, 14 putative modules of resistance mechanisms including modules of ribosomal protein-coding genes and metabolic pathways such as biotin-synthesis, TCA-cycle, riboflavin-biosynthesis, peptidoglycan-biosynthesis etc. are also indicated. more...
- Published
- 2015
56. The mechanism of action of ramoplanin and enduracidin
- Author
-
Dale L. Boger, Jutta Wanner, Xiao Fang, Yi Zhang, Suzanne Walker, and Kittichoat Tiyanont
- Subjects
Models, Molecular ,Microbial Sensitivity Tests ,Biology ,Peptides, Cyclic ,Bacterial cell structure ,chemistry.chemical_compound ,Biosynthesis ,Depsipeptides ,Escherichia coli ,medicine ,Molecular Biology ,chemistry.chemical_classification ,Lipid II ,Glycopeptides ,Substrate (chemistry) ,Ramoplanin ,Anti-Bacterial Agents ,Kinetics ,Enzyme ,chemistry ,Mechanism of action ,Biochemistry ,Peptidoglycan ,medicine.symptom ,Biotechnology ,medicine.drug - Abstract
The lipoglycodepsipeptide antibiotic ramoplanin is proposed to inhibit bacterial cell wall biosynthesis by binding to intermediates along the pathway to mature peptidoglycan, which interferes with further enzymatic processing. Two sequential enzymatic steps can be blocked by ramoplanin, but there is no definitive information about whether one step is inhibited preferentially. Here we use inhibition kinetics and binding assays to assess whether ramoplanin and the related compound enduracidin have an intrinsic preference for one step over the other. Both ramoplanin and enduracidin preferentially inhibit the transglycosylation step of peptidoglycan biosynthesis compared with the MurG step. The basis for stronger inhibition is a greater affinity for the transglycosylase substrate Lipid II over the MurG substrate Lipid I. These results provide compelling evidence that ramoplanin's and enduracidin's primary cellular target is the transglycosylation step of peptidoglycan biosynthesis. more...
- Published
- 2006
- Full Text
- View/download PDF
57. Ramoplanin: A Lipoglycodepsipeptide Antibiotic
- Author
-
Dennis D Hedge, Steven C Lee, and Debra K Farver
- Subjects
Adult ,Diarrhea ,Clinical Trials as Topic ,Lipid II ,Clostridioides difficile ,medicine.drug_class ,business.industry ,Antibiotics ,Microbial Sensitivity Tests ,Ramoplanin ,Antimicrobial ,Glycopeptide ,Anti-Bacterial Agents ,Microbiology ,Clinical trial ,Pharmacokinetics ,Depsipeptides ,medicine ,Humans ,Pharmacology (medical) ,Anaerobic bacteria ,business ,medicine.drug - Abstract
OBJECTIVE: To review the pharmacology, antimicrobial activity, pharmacokinetics, clinical applications, and safety of ramoplanin, a lipoglycodepsipeptide antibiotic. DATA SOURCES: Information was obtained from MEDLINE and BIOSIS databases (1984–August 2004) and Oscient Pharmaceu ticals using the key words ramoplanin, A 16686, A 16686A, and MDL 62198. STUDY SELECTION AND DATA EXTRACTION: Available English-based articles and abstracts were reviewed, along with information from Oscient Pharmaceuticals. DATA SYNTHESIS: Ramoplanin exerts its bactericidal activity against gram-positive aerobic and anaerobic bacteria by blocking peptidoglycan synthesis via lipid II. In vitro susceptibility reports have demonstrated efficacy against antibiotic-resistant gram-positive pathogens. Cross-resistance has not been documented with vancomyin and other glycopeptides. Clinical trials are investigating ramoplanin's oral administration for treatment of Clostridium difficile–associated diarrhea. Previous clinical trials had evaluated the suppression of colonization of vancomycin-resistant Enterococcus with ramoplanin. Adverse effects are minimal, and drug—drug interactions have not been documented. CONCLUSIONS: The completion of clinical trials will determine whether ramoplanin has a promising role as a treatment option for diarrhea due to C. difficile. more...
- Published
- 2005
- Full Text
- View/download PDF
58. Ramoplanin: a topical lipoglycodepsipeptide antibacterial agent
- Author
-
Fulco, Patricia and Wenzel, Richard P
- Published
- 2006
- Full Text
- View/download PDF
59. Efficacy of Oral Ramoplanin for Inhibition of Intestinal Colonization by Vancomycin-Resistant Enterococci in Mice
- Author
-
Marion S. Helfand, Curtis J. Donskey, Nicole J. Pultz, and Usha Stiefel
- Subjects
medicine.drug_class ,Antibiotics ,Colony Count, Microbial ,Administration, Oral ,Candida glabrata ,Biology ,Peptides, Cyclic ,Microbiology ,Feces ,Mice ,Cecum ,Oral administration ,Depsipeptides ,Disease Transmission, Infectious ,medicine ,Animals ,Experimental Therapeutics ,Pharmacology (medical) ,Colonization ,Gram-Positive Bacterial Infections ,Pharmacology ,Cross Infection ,Vancomycin Resistance ,Ramoplanin ,biochemical phenomena, metabolism, and nutrition ,bacterial infections and mycoses ,biology.organism_classification ,Streptococcaceae ,Glycopeptide ,Anti-Bacterial Agents ,Klebsiella pneumoniae ,Infectious Diseases ,medicine.anatomical_structure ,Enterococcus ,Female ,medicine.drug - Abstract
Ramoplanin is a glycolipodepsipeptide antibiotic with activity against gram-positive bacteria that is in clinical trials for prevention of vancomycin-resistant Enterococcus (VRE) bloodstream infections and treatment of Clostridium difficile diarrhea. Orally administered ramoplanin suppresses VRE intestinal colonization, but recurrences after discontinuation of treatment have frequently been observed. We used a mouse model to examine the efficacy of ramoplanin for inhibition of VRE colonization and evaluated the etiology of recurrences of colonization. Eight days of treatment with ramoplanin (100 μg/ml) in drinking water suppressed VRE to undetectable levels, but 100% of mice developed recurrent colonization; a higher dose of 500 μg/ml in water was associated with recurrent colonization in 50% of mice. Two of eight (25%) mice treated with the 100-μg/ml dose of ramoplanin had low levels of VRE in their cecal tissues on day 8 despite undetectable levels in stool and cecal contents. Mice that received prior ramoplanin treatment did not develop VRE overgrowth when challenged with 10 7 CFU of oral VRE 1, 2, or 4 days later. In communal cages, rapid cross-transmission and overgrowth of VRE was observed among clindamycin-treated mice; ramoplanin treatment effectively suppressed VRE overgrowth in such communal cages. Ramoplanin treatment promoted increased density of indigenous Enterobacteriaceae and overgrowth of an exogenously administered Klebsiella pneumoniae isolate. These results demonstrate the efficacy of ramoplanin for inhibition of VRE colonization and suggest that some recurrences occur due to reexpansion of organisms that persist within the lining of the colon. Ramoplanin treatment may be associated with overgrowth of gram-negative bacilli. more...
- Published
- 2004
- Full Text
- View/download PDF
60. Comparison of the efficacy of ramoplanin and vancomycin in both in vitro and in vivo models of clindamycin-induced Clostridium difficile infection
- Author
-
Freeman, Jane, Baines, Simon D., Jabes, Daniela, and Wilcox, Mark H.
- Published
- 2005
61. 3D structure of ramoplanin: a potent inhibitor of bacterial cell wall synthesis
- Author
-
Kurz, Michael and Guba, Wolfgang
- Subjects
Antibiotics -- Research ,Bacterial cell walls -- Research ,Biological sciences ,Chemistry - Abstract
The 3D structure of ramoplanin was examined by NMR spectroscopy in aqueous solution. A total of 320 interproton distances were determined from a nuclear Overhauser enhancement spectroscopy spectrum and were utilized as restraints in distance geometry computations. Ramoplanin was found to have two antiparallel beta-strands which are formed by the residues 2-7 and 10-14, respectively. more...
- Published
- 1996
62. In Vitro Activities of Ramoplanin, Teicoplanin, Vancomycin, Linezolid, Bacitracin, and Four Other Antimicrobials against Intestinal Anaerobic Bacteria
- Author
-
Ellie J. C. Goldstein, C. V. Merriam, Diane M. Citron, Helen T. Fernandez, Yumi A. Warren, and Kerrin L. Tyrrell
- Subjects
medicine.drug_class ,Antibiotics ,Microbial Sensitivity Tests ,Bacitracin ,In Vitro Techniques ,Biology ,Peptides, Cyclic ,Microbiology ,Bacteria, Anaerobic ,Feces ,chemistry.chemical_compound ,Vancomycin ,Depsipeptides ,Acetamides ,medicine ,Actinomyces ,Pharmacology (medical) ,Oxazolidinones ,Antibacterial agent ,Pharmacology ,Clostridioides difficile ,Eubacterium ,Peptostreptococcus ,Teicoplanin ,Propionibacterium ,Linezolid ,Ramoplanin ,Anti-Bacterial Agents ,Intestines ,Infectious Diseases ,chemistry ,Susceptibility ,Anaerobic bacteria ,medicine.drug - Abstract
By using an agar dilution method, the in vitro activities of ramoplanin, teicoplanin, vancomycin, linezolid, and five other agents were determined against 300 gram-positive and 54 gram-negative strains of intestinal anaerobes. Ramoplanin was active at ≤2 μg/ml against 287 of 300 (95.7%) gram-positive organisms, including 18 strains of Clostridium difficile for which MICs of ramoplanin were 0.25 to 0.5 μg/ml; for 3 of these, linezolid MICs were 8 to 16 μg/ml. Nineteen Clostridium innocuum strains for which the vancomycin MIC at which 90% of strains were inhibited was 16 μg/ml were susceptible to ramoplanin at 0.06 to 0.25 μg/ml and to teicoplanin at 0.125 to 1.0 μg/ml. All strains of Eubacterium , Actinomyces , Propionibacterium , and Peptostreptococcus spp. were inhibited by ≤0.25 μg of ramoplanin per ml and ≤1 μg of vancomycin per ml. Ramoplanin was also active at ≤4 μg/ml against 15 of 22 of the Prevotella and Porphyromonas strains tested, but ramoplanin MICs for all 31 strains of the Bacteroides fragilis group, the Fusobacterium mortiferum-Fusobacterium varium group, and Veillonella spp. were ≥256 μg/ml. Ramoplanin displays excellent activity against C. difficile and other gram-positive enteric anaerobes, including vancomycin-resistant strains; however, it has poor activity against most gram-negative anaerobes and thus potentially has a lesser effect on the ecological balance of normal fecal flora. more...
- Published
- 2003
- Full Text
- View/download PDF
63. Ramoplanin: a novel antimicrobial agent with the potential to prevent vancomycin-resistant enterococcal infection in high-risk patients
- Author
-
Marisa A. Montecalvo
- Subjects
Microbiology (medical) ,medicine.medical_specialty ,medicine.drug_class ,Antibiotics ,Opportunistic Infections ,Peptides, Cyclic ,Enterococcus faecalis ,Microbiology ,Depsipeptides ,Neoplasms ,Internal medicine ,medicine ,Humans ,Pharmacology (medical) ,Gram-Positive Bacterial Infections ,Antibacterial agent ,Pharmacology ,Clinical Trials as Topic ,biology ,Vancomycin Resistance ,Ramoplanin ,biochemical phenomena, metabolism, and nutrition ,bacterial infections and mycoses ,biology.organism_classification ,Antimicrobial ,Anti-Bacterial Agents ,Treatment Outcome ,Infectious Diseases ,Enterococcus ,Vancomycin ,medicine.drug ,Enterococcus faecium - Abstract
The prevention of vancomycin-resistant Enterococcus (VRE) colonization and infection continues to be a high priority for clinicians. An oral antimicrobial agent that reduces or eliminates VRE gastrointestinal colonization could be useful for preventing VRE infection in selected patients. Ramoplanin, a glycolipodepsipeptide, is the first in a new class of antimicrobials. It has excellent in vitro activity against vancomycin-resistant Enterococcus faecium and Enterococcus faecalis. It is orally administered, and not absorbed systemically. In clinical trials, VRE gastrointestinal colonization was reduced to undetectable levels in 80-90% of patients during receipt of ramoplanin. A randomized, double-blinded, placebo-controlled multicentre study is currently being conducted to determine whether ramoplanin will prevent VRE bloodstream infection in oncology patients who are neutropenic due to treatment for a haematological malignancy or a bone marrow/stem cell transplant. more...
- Published
- 2003
- Full Text
- View/download PDF
64. Influence of Leucine and Valine on Ramoplanin Production by Actinoplanes sp. ATCC 33076
- Author
-
Giancarlo Lancini, Flavia Marinelli, Mara Brunati, and Adriana Bava
- Subjects
Pharmacology ,chemistry.chemical_classification ,Molecular Structure ,medicine.drug_class ,Antibiotics ,Fatty acid ,Micromonosporaceae ,Valine ,Ramoplanin ,Biology ,Anti-Bacterial Agents ,Amino acid ,Biochemistry ,chemistry ,Leucine ,Depsipeptides ,Fermentation ,Drug Discovery ,medicine ,Composition (visual arts) ,Chromatography, High Pressure Liquid ,medicine.drug - Abstract
Ramoplanin is a glycolipodepsipeptide antibiotic obtained by fermentation of the Actinoplanes sp. ATCC 33076, isolated as a complex of three closely related components A1, A2 and A3, which differ in their fatty acid moiety. We have investigated the influence of L-leucine and L-valine, the biosynthetic precursors of the fatty acids in A2 and A3 factors, on the complex composition and antibiotic productivity. Addition of 5 g/litre of L-leucine at the time of inoculation increases antibiotic production and improves the production of A2 factor, which represents the active principle component under clinical development. Addition of L-valine in the same conditions modifies the composition of the complex towards the A3 factor but does not improve total antibiotic productivity. A possible explanation for the different actions of the two amino acids is presented. more...
- Published
- 2005
- Full Text
- View/download PDF
65. Chemistry and biology of the ramoplanin family of peptide antibiotics
- Author
-
Predrag Cudic, Ryan G. Kruger, Brenda A Frankel, Salim Barkallah, Dewey G. McCafferty, and Wenkai Li
- Subjects
Models, Molecular ,Protein Conformation ,Peptidomimetic ,medicine.drug_class ,Molecular Sequence Data ,Antibiotics ,Antimicrobial peptides ,Biophysics ,Peptides, Cyclic ,Biochemistry ,Microbiology ,Biomaterials ,Depsipeptides ,medicine ,Amino Acid Sequence ,Gram-Positive Bacterial Infections ,Bacteria ,Chemistry ,Teicoplanin ,Organic Chemistry ,General Medicine ,Ramoplanin ,biochemical phenomena, metabolism, and nutrition ,Lantibiotics ,Antimicrobial ,Glycopeptide ,Anti-Bacterial Agents ,medicine.drug - Abstract
The peptide antibiotic ramoplanin factor A2 is a promising clinical candidate for treatment of Gram-positive bacterial infections that are resistant to antibiotics such as glycopeptides, macrolides, and penicillins. Since its discovery in 1984, no clinical or laboratory-generated resistance to this antibiotic has been reported. The mechanism of action of ramoplanin involves sequestration of peptidoglycan biosynthesis Lipid intermediates, thus physically occluding these substrates from proper utilization by the late-stage peptidoglycan biosynthesis enzymes MurG and the transglycosylases (TGases). Ramoplanin is structurally related to two cell wall active lipodepsipeptide antibiotics, janiemycin, and enduracidin, and is functionally related to members of the lantibiotic class of antimicrobial peptides (mersacidin, actagardine, nisin, and epidermin) and glycopeptide antibiotics (vancomycin and teicoplanin). Peptidomimetic chemotherapeutics derived from the ramoplanin sequence may find future use as antibiotics against vancomycin-resistant Enterococcus faecium (VRE), methicillin-resistant Staphylococcus aureus (MRSA), and related pathogens. Here we review the chemistry and biology of the ramoplanins including its discovery, structure elucidation, biosynthesis, antimicrobial activity, mechanism of action, and total synthesis. more...
- Published
- 2002
- Full Text
- View/download PDF
66. European survey of vancomycin-resistant enterococci in at-risk hospital wards and in vitro susceptibility testing of ramoplanin against these isolates
- Author
-
Goossens, Herman, Jabes, Daniela, Rossi, Rosaria, Lammens, Christine, Privitera, Gaetano, and Courvalin, Patrice
- Published
- 2003
67. Ramoplanin: a novel antimicrobial agent with the potential to prevent vancomycin-resistant enterococcal infection in high-risk patients
- Author
-
Montecalvo, Marisa A.
- Published
- 2003
68. Classification of Actinoplanes sp. ATCC 33076, an actinomycete that produces the glycolipodepsipeptide antibiotic ramoplanin, as Actinoplanes ramoplaninifer sp. nov.
- Author
-
Marcone GL, Binda E, Reguzzoni M, Gastaldo L, Dalmastri C, and Marinelli F
- Subjects
- Bacterial Typing Techniques, Base Composition, Cell Wall chemistry, DNA, Bacterial genetics, Diaminopimelic Acid chemistry, Fatty Acids chemistry, India, Micromonosporaceae genetics, Micromonosporaceae isolation & purification, Nucleic Acid Hybridization, Phospholipids chemistry, RNA, Ribosomal, 16S genetics, Sequence Analysis, DNA, Vitamin K 2 analogs & derivatives, Vitamin K 2 chemistry, Depsipeptides biosynthesis, Micromonosporaceae classification, Phylogeny, Soil Microbiology
- Abstract
Strain ATCC 33076, which produces the antibiotic ramoplanin, was isolated from a soil sample collected in India, and it was classified as a member of the genus Actinoplanes on the basis of morphology and cell-wall composition. A phylogenetic analysis based on 16S rRNA gene sequences indicated that the strain forms a distinct clade within the genus Actinoplanes, and it is most closely related to Actinoplanes deccanensis IFO 13994
T (98.71 % similarity) and Actinoplanes atraurantiacus Y16T (98.33 %). The strain forms an extensively branched substrate mycelium; the sporangia are formed very scantily and are globose with irregular surface. Spores are oval and motile. The cell wall contains meso-diaminopimelic acid and the diagnostic sugars are xylose and arabinose. The predominant menaquinone is MK-9(H6), with minor amounts of MK-9(H4) and MK-9(H2). Mycolic acids are absent. The diagnostic phospholipids are phosphatidylethanolamine, hydroxyphosphatidylethanolamine and phosphatidylglycerol. The major cellular fatty acids are anteiso-C17 : 0 and iso-C16 : 0, followed by iso-C15 : 0 and moderate amounts of anteiso-C15 : 0, iso-C17 : 0 and C18 : 1ω9c. The genomic DNA G+C content is 71.4 mol%. Significant differences in the morphological, chemotaxonomic and biochemical data, together with DNA-DNA relatedness between strain ATCC 33076 and closely related type strains, clearly demonstrated that strain ATCC 33076 represents a novel species of the genus Actinoplanes, for which the name Actinoplanes ramoplaninifer sp. nov. is proposed. The type strain is ATCC 33076T (=DSM 105064T =NRRL B-65484T ). more...- Published
- 2017
- Full Text
- View/download PDF
69. Determination of ramoplanin in human urine by high-performance liquid chromatography with automated column switching
- Author
-
Cavaleri, M, Pollini, W, and Colombo, L
- Published
- 1999
- Full Text
- View/download PDF
70. Presence of UDP-N-acetylmuramyl-hexapeptides and -heptapeptides and enterococci and staphylococci after treatment with ramoplanin, tunicamycin, or vancomycin
- Author
-
Billot-Klein, D., Shlaes, D., Bryant, D., Bell, D., Legrand, R., Gutmann, L., and van Heijenoort, J.
- Subjects
Liquid chromatography -- Usage ,Staphylococcus -- Research ,Peptides -- Research ,Biological sciences - Abstract
The procedure to analyses peptidogylcan necleotide precursors by high pressure liquid chromotography (HPLC) was developed initially for E. coli. This analysis of the ucleotide precursor contents of enterococci and staphylococci treated with ramoplanin, tunicamycin or vancomycin has been extended. New peptidoglycan nucleotide precursors of higher molecular masses with hexapeptide or haptapeptide moieties were identified. more...
- Published
- 1997
71. Chemistry and Biology of Ramoplanin: A Lipoglycodepsipeptide with Potent Antibiotic Activity
- Author
-
Yosup Rew, Dongwoo Shin, Suzanne Walker, Dale L. Boger, Lan Chen, and Yanan Hu
- Subjects
Molecular Structure ,Chemistry ,medicine.drug_class ,Antibiotics ,Microbial Sensitivity Tests ,General Medicine ,General Chemistry ,Ramoplanin ,Gram-Positive Bacteria ,N-Acetylglucosaminyltransferases ,Anti-Bacterial Agents ,Microbiology ,Structure-Activity Relationship ,Biochemistry ,Depsipeptides ,medicine ,Structure–activity relationship ,Bacterial Outer Membrane Proteins ,medicine.drug - Published
- 2005
- Full Text
- View/download PDF
72. Studies from Shanghai Institute of Pharmaceutical Industry Further Understanding of Gram-Positive Bacterial Infections (Production of the Ramoplanin Activity Analogue by Double Gene Inactivation)
- Subjects
Health aspects ,Physical fitness -- Health aspects ,Infection -- Health aspects ,Gram-positive bacterial infections -- Health aspects ,Pharmaceutical industry -- Health aspects ,Antibacterial agents -- Health aspects - Abstract
2017 AUG 5 (NewsRx) -- By a News Reporter-Staff News Editor at Obesity, Fitness & Wellness Week -- Data detailed on Gram-Positive Bacterial Infections have been presented. According to news [...] more...
- Published
- 2017
73. Chinese Academy of Fishery Sciences Researchers Add New Findings in the Area of Environmental Sciences (Simultaneous Determination of Active Clinical Components of Teicoplanin and Ramoplanin in Environmental Water by LC-MS/MS Coupled With ...)
- Subjects
Research ,Reports ,Fisheries -- Reports -- Research ,Antibacterial agents -- Research ,Fish industry -- Reports -- Research - Abstract
2021 DEC 21 (NewsRx) -- By a News Reporter-Staff News Editor at Life Science Weekly -- Fresh data on agriculture are presented in a new report. According to news reporting [...]
- Published
- 2021
74. Discovery of Six Ramoplanin Family Gene Clusters and the Lipoglycodepsipeptide Chersinamycin**.
- Author
-
Morgan, Kelsey T., Zheng, Jeffrey, and McCafferty, Dewey G.
- Published
- 2021
- Full Text
- View/download PDF
75. Pharmacological properties of NAI-603, a well-tolerated semisynthetic derivative of ramoplanin
- Author
-
Matteo Simone, Sonia I. Maffioli, Gabriella Romano, Gianpaolo Candiani, Cristina Brunati, Rosaria Rossi, Simona Riva, Daniela Jabes, Eleonora Gaspari, and Stefano Donadio
- Subjects
Methicillin-Resistant Staphylococcus aureus ,Cmax ,Microbial Sensitivity Tests ,Biology ,Microbiology ,chemistry.chemical_compound ,Mice ,Pharmacokinetics ,Vancomycin ,Depsipeptides ,Acetamides ,medicine ,Animals ,Experimental Therapeutics ,Pharmacology (medical) ,Oxazolidinones ,Pharmacology ,Mice, Inbred ICR ,Minimum bactericidal concentration ,Teicoplanin ,Linezolid ,Ramoplanin ,Staphylococcal Infections ,Effective dose (pharmacology) ,Anti-Bacterial Agents ,Infectious Diseases ,chemistry ,Female ,Erratum ,Enterococcus ,medicine.drug - Abstract
NAI-603 is a ramoplanin derivative designed to overcome the tolerability issues of the parent drug as a systemic agent. NAI-603 is highly active against aerobic and anaerobic Gram-positive bacteria, with MICs ranging from 0.008 to 8 μg/ml. MICs were not significantly affected by pH (range, 6 to 8), by inoculum up to 10 8 CFU/ml, or by addition of 50% human serum. Against staphylococci and enterococci, NAI-603 was rapidly bactericidal, with minimum bactericidal concentration (MBC)/MIC ratios never exceeding 4. The frequency of spontaneous resistance was low at 2× to 4× MIC (≤1 × 10 −6 to ≤1 × 10 −8 ) and below the detection limit (about ≤1 × 10 −9 ) at 8× MIC. Serial subcultures at 0.5× MIC yielded at most an 8-fold increase in MICs. In a systemic infection induced by methicillin-resistant Staphylococcus aureus (MRSA), the 50% effective dose (ED 50 ) of intravenous (i.v.) NAI-603 was 0.4 mg/kg, lower than that of oral (p.o.) linezolid (1.4 mg/kg) and subcutaneous (s.c.) teicoplanin (1.4 mg/kg) or vancomycin (0.6 mg/kg). In neutropenic mice infected with vancomycin-resistant enterococci (VRE), the ED 50 s for NAI-603 were 1.1 to 1.6 mg/kg i.v., compared to 0.5 mg/kg i.v. of ramoplanin. The bactericidal activity was confirmed in vivo in the rat granuloma pouch model induced by MRSA, where NAI-603, at 40 mg/kg i.v., induced about a 2- to 3-log 10 -reduction in viable bacteria in the exudates, which persisted for more than 72 h. The pharmacokinetic (PK) profiles of NAI-603 and ramoplanin at 20 mg/kg show similar half-lives (3.27 and 3.80 h, respectively) with the maximum concentration ( C max ) markedly higher for NAI-603 (207 μg/ml versus 79 μg/ml). The favorable pharmacological profile of NAI-603, coupled with the absence of local tolerability issues, supports further investigation. more...
- Published
- 2014
76. Synthesis and Preliminary Biological Characterization of New Semisynthetic Derivatives of Ramoplanin.
- Author
-
Romeo Ciabatti, Sonia I. Maffioli, Gianbattista Panzone, Augusto Canavesi, Elena Michelucci, Paolo S. Tiseni, Ettore Marzorati, Anna Checchia, Matteo Giannone, Daniela Jabes, Gabriella Romanò, Cristina Brunati, Gianpaolo Candiani, and Franca Castiglione more...
- Published
- 2007
- Full Text
- View/download PDF
77. Chemoenzymatic deacylation of ramoplanin
- Author
-
Flavia Marinelli, Enzio Ragg, Raffaella Gandolfi, Diego Romano, and Francesco Molinari
- Subjects
Magnetic Resonance Spectroscopy ,Chemistry ,Stereochemistry ,Organic Chemistry ,Clinical Biochemistry ,Actinoplanes utahensis ,Pharmaceutical Science ,Micromonosporaceae ,Ramoplanin ,Ramoplanin A2 ,Biochemistry ,computer.software ,Amidohydrolases ,Depsipeptides ,Drug Discovery ,medicine ,Molecular Medicine ,Molecular Biology ,computer ,Biotransformation ,medicine.drug ,Glycoproteins - Abstract
The chemoenzymatic deacylation of ramoplanin A2 is described for the first time: ramoplanin A2 was Boc-protected and hydrogenated to Boc-protected tetrahydroramoplanin, which was subsequently deacylated using an acylase from Actinoplanes utahensis NRRL 12052. The chemoenzymatic process proceeded with 80% overall yield, which favourably compares with the previously described chemical deacylation. more...
- Published
- 2012
78. Research Conducted at Monash University Has Provided New Information about Antibiotics (Synthetic Ramoplanin Analogues Are Accessible By Effective Incorporation of Arylglycines In Solid-phase Peptide Synthesis).
- Abstract
Researchers at Monash University in Clayton, Australia have developed a new method for synthesizing antibiotics. The method involves incorporating arylglycines, a type of amino acid found in natural peptide antibiotics, into long peptide sequences. This breakthrough allows for the synthesis of challenging non-ribosomal peptides and enables drug discovery programs to include arylglycines in structure-activity relationship studies and drug development. The new method significantly reduces synthesis time and has been successfully used to synthesize analogues of the peptide antibiotic ramoplanin. [Extracted from the article] more...
- Published
- 2024
79. Ramoplanin may be as effective as vancomycin for treating Clostridium difficile-associated diarrhoea
- Published
- 2004
80. In-vitro activity of ramoplanin (a novel lipoglycopeptide), vancomycin, and teicoplanin against Gram-positive clinical isolates from cancer patients
- Author
-
Harriet Streeter, Barbara LeBlanc, Kenneth V. I. Rolston, Tanya Dvorak, D. H. Ho, and N. Dholakia
- Subjects
Microbiology (medical) ,Lipoglycopeptide ,Microbial Sensitivity Tests ,medicine.disease_cause ,Peptides, Cyclic ,Microbiology ,chemistry.chemical_compound ,Vancomycin ,Depsipeptides ,Neoplasms ,medicine ,Humans ,Pharmacology (medical) ,Gram-Positive Bacterial Infections ,Antibacterial agent ,Pharmacology ,biology ,Teicoplanin ,Ramoplanin ,biochemical phenomena, metabolism, and nutrition ,bacterial infections and mycoses ,biology.organism_classification ,Methicillin-resistant Staphylococcus aureus ,Anti-Bacterial Agents ,Gram-Positive Cocci ,carbohydrates (lipids) ,Infectious Diseases ,chemistry ,Staphylococcus aureus ,bacteria ,medicine.drug ,Enterococcus faecium - Abstract
The in-vitro activities of ramoplanin, vancomycin, and teicoplanin against Gram-positive organisms isolated from cancer patients were determined. Ramoplanin was the most active agent tested inhibiting all isolates at a concentration of < or = 0.5 mg/L. Although all isolates were also susceptible to vancomycin and teicoplanin, their activities were surpassed by that of ramoplanin. The activity of teicoplanin was moderately better than that of vancomycin against Bacillus cereus, Enterococcus faecium, Listeria monocytogenes, methicillin-resistant Staphylococcus aureus, and most streptococcal isolates, and was comparable to vancomycin for the remainder of the isolates tested. more...
- Published
- 1996
- Full Text
- View/download PDF
81. 3D Structure of Ramoplanin: A Potent Inhibitor of Bacterial Cell Wall Synthesis
- Author
-
Wolfgang Guba and Michael Kurz
- Subjects
Models, Molecular ,Magnetic Resonance Spectroscopy ,Protein Conformation ,Stereochemistry ,Molecular Sequence Data ,Antiparallel (biochemistry) ,Peptides, Cyclic ,Biochemistry ,Protein Structure, Secondary ,Turn (biochemistry) ,Cell Wall ,Depsipeptides ,Side chain ,medicine ,Computer Simulation ,Amino Acid Sequence ,Molecular Structure ,Chemistry ,Hydrogen bond ,Hydrogen Bonding ,Nuclear magnetic resonance spectroscopy ,Ramoplanin ,Anti-Bacterial Agents ,Crystallography ,Intramolecular force ,Two-dimensional nuclear magnetic resonance spectroscopy ,medicine.drug - Abstract
The 3D structure of ramoplanin was studied by NMR spectroscopy in aqueous solution. A total of 320 interproton distances were determined from a NOESY spectrum and were used as restraints in distance geometry calculations. A structural refinement was carried out by molecular dynamics calculations in a solvent box. The structure of ramoplanin is characterized by two antiparallel beta-strands which are formed by the residues 2-7 and 10-14, respectively. The beta-strands are connected by six intramolecular hydrogen bonds and a reverse beta-turn which is formed by Thr8 and Phe9 (in positions i+1 and i+2, respectively). Residues 2 and 14 are connected by a loop consisting of Leu15, Ala16, Chp17, and the side chain of Asn2. Although residues 14-17 show the formation of a beta-turn, only the N-terminal end of the turn is directly connected to one of the beta-strands (Gly14), whereas the C-terminal end (Chp17) is linked via the side chain of Asn2. The 3D conformation of ramoplanin is also stabilized by a hydrophobic cluster of the aromatic sidechains of the residues 3, 9, and 17. This hydrophobic collapse leads to a U-shaped topology of the beta-shee: with the beta-turn at one end and the loop at the other end. The structure found for ramoplanin differs corsiderably from the published structure of ramoplanose which might be due to a smaller number of NOE distance restraints used in the previous study. more...
- Published
- 1996
- Full Text
- View/download PDF
82. Unmodified gold nanoparticles as a simple colorimetric probe for ramoplanin detection
- Author
-
P. Chumsaeng, Natvara Bousod, Khwankhao Palasak, Siriwan Teepoo, Naree Mhadbamrung, and Phorntip Sae-lim
- Subjects
Color ,Metal Nanoparticles ,Analytical Chemistry ,Absorbance ,Limit of Detection ,Depsipeptides ,medicine ,Humans ,Particle Size ,Detection limit ,Reproducibility ,Chromatography ,Chemistry ,Reproducibility of Results ,Ramoplanin ,Surface Plasmon Resonance ,Anti-Bacterial Agents ,Kinetics ,Linear range ,Colloidal gold ,Colorimetry ,Particle size ,Adsorption ,Gold ,Selectivity ,medicine.drug - Abstract
In this paper unmodified gold nanoparticles (AuNPs) were used as a sensing element to detect ramoplamin. Detection relies on the fact that the dispersed AuNPs solution is red due to the intense surface plasmon absorption band at 530 nm whereas the AuNPs solution in the presence of ramoplanin is blue. Upon aggregation, there is a significant change in absorbance intensity at 620 nm. Based on the aggregation of AuNPs induced by ramoplanin, a simple colorimetric method was developed for determining the of ramoplanin concentration. Experimental conditions influencing the analytical performance such as particle size, amount of AuNPs, incubation time and pH were evaluated. Under the optimized experimental conditions, this method could detect ramoplanin in a linear range from 0.30 to 1.30 ppm with a detection limit of 0.01 ppm and exhibited good reproducibility, selectivity and recovery. Analysis time of this assay was only 2 min. To investigate its potential applicability, this assay was successfully applied for the determination of ramoplanin in urine samples without costly instruments. more...
- Published
- 2013
83. Efficacy of Ramoplanin in the hamster model of C. difficile associated colitis
- Author
-
Candiani, G. and Jabes, D.
- Published
- 2003
84. In Vitro Activity of RP 59500 (quinupristin/dalfopristin) and Ramoplanin against Vancomycin-Resistant Enterococcus faecium
- Author
-
John R. Warren, Tracey A. Ristow, Lance R. Peterson, and Gary A. Noskin
- Subjects
Microbiology (medical) ,Enterococcus faecium ,Immunology ,Colony Count, Microbial ,Microbial Sensitivity Tests ,Biology ,Peptides, Cyclic ,Virginiamycin ,Microbiology ,Agar dilution ,chemistry.chemical_compound ,Vancomycin ,Depsipeptides ,medicine ,Humans ,Gram-Positive Bacterial Infections ,Vancomycin resistant Enterococcus faecium ,Pharmacology ,Drug Resistance, Microbial ,Ramoplanin ,biochemical phenomena, metabolism, and nutrition ,biology.organism_classification ,In vitro ,Anti-Bacterial Agents ,Kinetics ,Quinupristin/dalfopristin ,Phenotype ,chemistry ,Genes, Bacterial ,medicine.drug - Abstract
Vancomycin-resistant Enterococcus faecium (VREF) collected between July 1991 and February 1994 were tested in vitro against RP 59500 and ramoplanin using agar dilution and standard macro broth dilution procedures. Colony counts were determined at 0, 4, and 24 h. RP 59500 had an MIC range ofor = 0.5-8 micrograms/ml with an MIC90 of 2 micrograms/ml and a MBC range ofor = 0.5-16 micrograms/ml with an MBC90 of 16 micrograms/ml. Ramoplanin had an MIC range ofor = 0.125-1 microgram/ml with an MBC range ofor = 0.125-4 micrograms/ml. The MIC90 for ramoplanin was 1 microgram/ml and the MBC90 was 4 micrograms/ml for the tested isolates. Against these isolates of E. faecium, RP 59500 was bactericidal at 8x MIC, a potentially achievable level using a high drug dosage. Ramoplanin was bactericidal at 2x MIC. more...
- Published
- 1995
- Full Text
- View/download PDF
85. Total synthesis and structure of the ramoplanin A1 and A3 aglycons: Two minor components of the ramoplanin complex
- Author
-
Yosup Rew, Dale L. Boger, and Dongwoo Shin
- Subjects
Depsipeptide ,Multidisciplinary ,Molecular Structure ,Chemistry ,Stereochemistry ,Chemistry, Organic ,Total synthesis ,Stereoisomerism ,Ramoplanin ,Ramoplanin A2 ,Peptides, Cyclic ,Anti-Bacterial Agents ,Depsipeptides ,medicine ,Natural Product Synthesis Special Feature ,medicine.drug - Abstract
Ramoplanin is a potent antibiotic, first disclosed in 1984, that acts by inhibiting bacterial cell-wall biosynthesis. The original ramoplanin complex was shown to consist of a mixture of three closely related compounds, ramoplanin A1–A3, of which ramoplanin A2 is the most abundant. The structure of ramoplanin A2 was unambiguously established first through a series of extensive spectroscopic studies, allowing complete stereochemical assignments and subsequently providing a minor reassignment of the side-chain double-bond stereochemistry and, most recently, through total synthesis of authentic material. Here we report the total syntheses of the aglycons of the minor components of the ramoplanin complex, A1 and A3, which unambiguously establish their structure and provide an expected structural revision for the lipid side-chain double-bond stereochemistry. more...
- Published
- 2004
86. Analysis of anti-Clostridium difficile activity of thuricin CD, vancomycin, metronidazole, ramoplanin, and actagardine, both singly and in paired combinations
- Author
-
Harsh Mathur, Paul D. Cotter, Colin Hill, R. Paul Ross, and Paula M. O'Connor
- Subjects
medicine.drug_class ,Antibiotics ,Microbial Sensitivity Tests ,Pharmacology ,Biology ,Microbiology ,Clostridium ,Bacteriocins ,Vancomycin ,Depsipeptides ,Metronidazole ,medicine ,Humans ,Pharmacology (medical) ,Experimental Therapeutics ,Enterocolitis, Pseudomembranous ,Clostridioides difficile ,Drug Synergism ,Ramoplanin ,Clostridium difficile ,Antimicrobial ,biology.organism_classification ,Anti-Bacterial Agents ,Diarrhea ,Infectious Diseases ,Drug Therapy, Combination ,medicine.symptom ,Peptides ,medicine.drug - Abstract
Due to the ongoing problem of recurrence of Clostridium difficile -associated diarrhea following antibiotic treatment, there is an urgent need for alternative treatment options. We assessed the MICs of five antimicrobials singly and in combinations against a range of C. difficile clinical isolates. Ramoplanin-actagardine combinations were particularly effective, with partial synergistic/additive effects observed against 61.5% of C. difficile strains tested. more...
- Published
- 2013
87. Engineered biosynthesis of enduracidin lipoglycopeptide antibiotics using the ramoplanin mannosyltransferase Ram29
- Author
-
Wu, Ming-Cheng, Styles, Matthew, Law, Brian, Struck, Anna-Winona, Nunns, Laura, and Micklefield, Jason
- Subjects
Models, Molecular ,Molecular Structure ,Glycopeptides ,Gene Expression ,ResearchInstitutes_Networks_Beacons/manchester_institute_of_biotechnology ,Mannosyltransferases ,Models, Biological ,Peptides, Cyclic ,Standard ,Streptomyces ,Anti-Bacterial Agents ,Biosynthetic Pathways ,Lipopeptides ,Metabolic Engineering ,Tandem Mass Spectrometry ,Manchester Institute of Biotechnology ,Depsipeptides ,Cloning, Molecular ,Biotechnology ,Plasmids - Abstract
The lipopeptides ramoplanin from Actinoplanes sp. ATCC 33076 and enduracidin produced by Streptomyces fungicidicus are effective antibiotics against a number of drug-resistant Gram-positive pathogens. While these two antibiotics share a similar cyclic peptide structure, comprising 17 amino acids with an N-terminal fatty acid side chain, ramoplanin has a di-mannose moiety that enduracidin lacks. The mannosyl substituents of ramoplanin enhance aqueous solubility, which was important in the development of ramoplanin as a potential treatment for Clostridium difficile infections. In this study we have determined the function of the putative mannosyltransferase encoded by ram29 from the ramoplanin biosynthetic gene cluster. Bioinformatics revealed that Ram29 is an integral membrane protein with a putative DxD motif that is suggested to bind to, and activate, a polyprenyl phosphomannose donor and an extracytoplasmic C-terminal domain that is predicted to bind the ramoplanin aglycone acceptor. The ram29 gene was cloned into the tetracycline inducible plasmid pMS17 and integrated into the genome of the enduracidin producer S. fungicidicus. Induction of ram29 expression in S. fungicidicus resulted in the production of monomannosylated enduracidin derivatives, which are not present in the WT strain. Tandem MS analysis showed that mannosylation occurs on the Hpg11 residue of enduracidin. In addition to confirming the function of Ram29, these findings demonstrate how the less common, membrane-associated, polyprenyl phosphosugar-dependent glycosyltransferases can be used in natural product glycodiversification. Such a strategy may be valuable in future biosynthetic engineering approaches aimed at improving the physico-chemical and biological properties of bioactive secondary metabolites including antibiotics. more...
- Published
- 2015
- Full Text
- View/download PDF
88. In vitro activities of ramoplanin, selected glycopeptides, fluoroquinolones, and other antibiotics against clinical bloodstream isolates of gram-positive cocci
- Author
-
T R Beam, Daniel Amsterdam, T Lawrence, E. A. Gorzynski, and C Rotstein
- Subjects
medicine.drug_class ,Antibiotics ,Microbial Sensitivity Tests ,Biology ,medicine.disease_cause ,Peptides, Cyclic ,Microbiology ,Minimum inhibitory concentration ,Anti-Infective Agents ,Vancomycin ,Depsipeptides ,Streptococcus pneumoniae ,polycyclic compounds ,medicine ,Humans ,Pharmacology (medical) ,Gram-Positive Bacterial Infections ,Oxacillin ,Antibacterial agent ,Pharmacology ,Teicoplanin ,Drug Resistance, Microbial ,Ramoplanin ,biochemical phenomena, metabolism, and nutrition ,Anti-Bacterial Agents ,Gram-Positive Cocci ,carbohydrates (lipids) ,Infectious Diseases ,Staphylococcus aureus ,bacteria ,Research Article ,Fluoroquinolones ,medicine.drug - Abstract
The susceptibilities of 316 gram-positive bacteremic isolates to ramoplanin, vancomycin, and teicoplanin and seven other antibiotics were tested. Ramoplanin demonstrated MICs of < or = 0.25 microgram/ml for at least 99% of Staphylococcus aureus isolates and 100% of coagulase-negative staphylococci tested. For both oxacillin-susceptible and oxacillin-resistant S. aureus and coagulase-negative staphylococci, the activity of ramoplanin surpassed those of both vancomycin and teicoplanin. Ramoplanin and teicoplanin had comparable activities against enterococci and Streptococcus pneumoniae and were superior to vancomycin. more...
- Published
- 1993
- Full Text
- View/download PDF
89. Total Synthesis and Examination of Three Key Analogues of Ramoplanin: A Lipoglycodepsipeptide with Potent Antibiotic Activity
- Author
-
Inkyu Hwang, Yosup Rew, Dongwoo Shin, and Dale L. Boger
- Subjects
Staphylococcus aureus ,medicine.drug_class ,Stereochemistry ,Carboxamide ,Microbial Sensitivity Tests ,Peptides, Cyclic ,Biochemistry ,Catalysis ,chemistry.chemical_compound ,Colloid and Surface Chemistry ,Anti-Infective Agents ,Depsipeptides ,Amide ,medicine ,Side chain ,Methylene ,Antibacterial agent ,Depsipeptide ,Chemistry ,Glycopeptides ,Total synthesis ,General Medicine ,General Chemistry ,Ramoplanin ,Antimicrobial ,Anti-Bacterial Agents ,medicine.drug - Abstract
The total synthesis and evaluation of three key ramoplanin aglycon analogues are detailed. The first (5a) represents replacement of the labile depsipeptide ester with a stable amide (HAsn2 → Dap2) with removal of the HAsn pendant carboxamide, and it was found to be slightly more potent than the natural aglycon in antimicrobial assays providing a new lead structure with an improved profile and a more stable and accessible macrocyclic template on which to conduct structure−function studies. In contrast, a second amide analogue 5b which contains a single additional methylene relative to 5a (HAsn2 → Dab2) was found to be inactive in antimicrobial assays (>100-fold loss in activity). The third key analogue 5c in which the Asn1 lipid side chain was replaced with an acetyl group revealed that it contributes significantly to the antimicrobial activity (16-fold) of the ramoplanins, but is not essential. more...
- Published
- 2004
- Full Text
- View/download PDF
90. Validation of a bioanalytical method for the quantification of a therapeutic peptide, ramoplanin, in human dried blood spots using LC-MS/MS
- Author
-
David M. Bakes, Phillip E Turpin, Lee Goodwin, and Matthew Ewles
- Subjects
Bioanalysis ,Clinical Biochemistry ,Peptide ,Biochemistry ,Sensitivity and Specificity ,Analytical Chemistry ,Drug Therapy ,Tandem Mass Spectrometry ,Depsipeptides ,Drug Discovery ,Lc ms ms ,medicine ,Humans ,Dried blood ,Molecular Biology ,Chromatography, High Pressure Liquid ,Pharmacology ,chemistry.chemical_classification ,Chromatography ,Chemistry ,General Medicine ,Ramoplanin ,Mass spectrometric ,Dried blood spot ,Anti-Bacterial Agents ,Sample collection ,medicine.drug - Abstract
A method has been developed and validated for the quantification of ramoplanin, a 2554 Da peptide antibiotic, in human dried blood spots using high-performance liquid chromatography with tandem mass spectrometric detection. The validation data meet FDA acceptance criteria for bioanalytical assays and cover the quantification of ramoplanin over the range 10–5000 ng/mL. The assay determines ramoplanin at the same lower limit of quantification as conventional liquid sample methods. Dried blood spot analysis provides an approach for quantification of peptide therapeutics and delivers significant benefits for sample collection and handling and also sample cleanup over conventional plasma and serum assays. Copyright © 2010 John Wiley & Sons, Ltd. more...
- Published
- 2010
91. Functional and biochemical analysis of a key series of ramoplanin analogues
- Author
-
Suzanne Walker, Yosup Rew, Xiao Fang, Joonwoo Nam, Dale L. Boger, and Dongwoo Shin
- Subjects
Glycan ,Clinical Biochemistry ,Pharmaceutical Science ,medicine.disease_cause ,Gram-Positive Bacteria ,Biochemistry ,Article ,Microbiology ,chemistry.chemical_compound ,Depsipeptides ,Drug Resistance, Multiple, Bacterial ,Drug Discovery ,medicine ,Escherichia coli ,Molecular Biology ,Antibacterial agent ,Alanine ,Peptidoglycan glycosyltransferase ,biology ,Lipid II ,Organic Chemistry ,Ramoplanin ,biochemical phenomena, metabolism, and nutrition ,Anti-Bacterial Agents ,chemistry ,Staphylococcus aureus ,biology.protein ,Molecular Medicine ,Peptidoglycan ,Peptidoglycan Glycosyltransferase ,medicine.drug - Abstract
Ramoplanin is a potent lipoglycodepsipeptide antibiotic that is active against a wide range of Gram-positive bacteria, including methicillin-resistant Staphylococcus aureus (MRSA) and vancomycin-resistant enterococcus (VRE). It acts as an inhibitor of peptidoglycan (PG) biosynthesis that disrupts glycan chain polymerization by binding and sequestering Lipid II, a PG precursor. Herein, we report the functional antimicrobial activity (MIC, S. aureus) and fundamental biochemical assessments against a peptidoglycan glycosyltransferase (Escherichia coli PBP1b) of a set of key alanine scan analogues of ramoplanin that provide insight into the importance and role of each of its individual amino acid residues. more...
- Published
- 2009
92. The Impact of Heterologous Regulatory Genes from Lipodepsipeptide Biosynthetic Gene Clusters on the Production of Teicoplanin and A40926
- Author
-
Kseniia Zhukrovska, Elisa Binda, Victor Fedorenko, Flavia Marinelli, and Oleksandr Yushchuk
- Subjects
ramoplanin ,chersinamycin ,teicoplanin ,A40926 ,production improvement ,pathway-specific regulatory genes ,Therapeutics. Pharmacology ,RM1-950 - Abstract
StrR-like pathway-specific transcriptional regulators (PSRs) function as activators in the biosynthesis of various antibiotics, including glycopeptides (GPAs), aminoglycosides, aminocoumarins, and ramoplanin-like lipodepsipeptides (LDPs). In particular, the roles of StrR-like PSRs have been previously investigated in the biosynthesis of streptomycin, novobiocin, GPAs like balhimycin, teicoplanin, and A40926, as well as LDP enduracidin. In the current study, we focused on StrR-like PSRs from the ramoplanin biosynthetic gene cluster (BGC) in Actinoplanes ramoplaninifer ATCC 33076 (Ramo5) and the chersinamycin BGC in Micromonospora chersina DSM 44151 (Chers28). Through the analysis of the amino acid sequences of Ramo5 and Chers28, we discovered that these proteins are phylogenetically distant from other experimentally investigated StrR PSRs, although all StrR-like PSRs found in BGCs for different antibiotics share a conserved secondary structure. To investigate whether Ramo5 and Chers28, given their phylogenetic positions, might influence the biosynthesis of other antibiotic pathways governed by StrR-like PSRs, the corresponding genes (ramo5 and chers28) were heterologously expressed in Actinoplanes teichomyceticus NRRL B-16726 and Nonomuraea gerenzanensis ATCC 39727, which produce the clinically-relevant GPAs teicoplanin and A40926, respectively. Recombinant strains of NRRL B-16726 and ATCC 39727 expressing chers28 exhibited improved antibiotic production, although the expression of ramo5 did not yield the same effect. These results demonstrate that some StrR-like PSRs can “cross-talk” between distant biosynthetic pathways and might be utilized as tools for the activation of silent BGCs regulated by StrR-like PSRs. more...
- Published
- 2024
- Full Text
- View/download PDF
93. ChemInform Abstract: Vancomycin, Teicoplanin, and Ramoplanin: Synthetic and Mechanistic Studies
- Author
-
Dale L. Boger
- Subjects
medicine.drug_class ,Chemistry ,Teicoplanin ,Antibiotics ,General Medicine ,Ramoplanin ,biochemical phenomena, metabolism, and nutrition ,medicine.disease_cause ,Glycopeptide ,Microbiology ,Antibiotic resistance ,Staphylococcus aureus ,medicine ,Vancomycin ,medicine.drug - Abstract
Vancomycin, teicoplanin, and ramoplanin are potent glycopeptide antibiotics that act by inhibiting bacterial cell wall biosynthesis. The former are used clinically as the antibiotics of last resort for the treatment of methicillin-resistant Staphylococcus aureus and the latter is a promising new antibiotic that is not susceptible to the emerging bacterial resistance to vancomycin and teicoplanin. A summary of our recent total synthesis of the vancomycin aglycon, our first and second generation total syntheses of the teicoplanin aglycon, and our progress on the total synthesis of the ramoplanins is presented. This work lays the foundation for ongoing structure-function studies on the antibiotics that may clarify or define their site and mechanism of action leading to the development of improved or reengineered antibiotics. more...
- Published
- 2010
- Full Text
- View/download PDF
94. A new bacterial mannosidase for the selective modification of ramoplanin and its derivatives
- Author
-
Flavia Marinelli, Francesco Molinari, S. Jovetic, Diego Romano, Samuele Di Palo, and Raffaella Gandolfi
- Subjects
Mannosidase ,biology ,Lipid II ,Streptomycetaceae ,Mannose ,Bioengineering ,Ramoplanin ,biology.organism_classification ,Applied Microbiology and Biotechnology ,Biochemistry ,Streptomyces ,chemistry.chemical_compound ,chemistry ,Biotransformation ,medicine ,Actinomycetales ,Biotechnology ,medicine.drug - Abstract
Ramoplanin is a lipoglycodepsipeptide produced by Actinoplanes sp. ATCC 33076 and active on bacterial cell wall biosynthesis by binding to Lipid II. A screening of an actinomycetes collection was performed to select enzymatic activities able to introduce specific modifications in the ramoplanin molecule. An extracellular mannosidase from Streptomyces GE 91081 was found to selectively remove one mannose unit from ramoplanin and tetrahydroramoplanin to give the corresponding mannosyl aglycones. These molecules show an improved microbiological activity versus some resistant staphylococci and streptococci, and are useful intermediates in the synthesis of novel ramoplanin-like antibiotics. The biotransformation of ramoplanin has been optimised to improve molar conversion and the transformation reaction rate. more...
- Published
- 2007
95. Ramoplanin: a topical lipoglycodepsipeptide antibacterial agent
- Author
-
Richard P. Wenzel and Patricia Pecora Fulco
- Subjects
Microbiology (medical) ,medicine.drug_class ,Gram-positive bacteria ,Administration, Topical ,Antibiotics ,Peptidoglycan ,Biology ,Microbiology ,Minimum inhibitory concentration ,Cell Wall ,Virology ,Depsipeptides ,medicine ,Humans ,Antibacterial agent ,Lipid II ,Clostridioides difficile ,Enterocolitis ,Ramoplanin ,Clostridium difficile ,biology.organism_classification ,Anti-Bacterial Agents ,Infectious Diseases ,Vancomycin ,medicine.drug - Abstract
Ramoplanin, a novel antibiotic with activity against aerobic and anaerobic gram-positive bacteria, acts to prevent cell wall peptidoglycan formation by binding to a key intermediate moiety, lipid II. It has been fast-tracked by the US FDA for the prevention of enterococcal infections and the treatment of Clostridium difficile. The minimum inhibitory concentration(90s) have been < or = 1.0 microg/ml against gram-positive organisms examined. In carriers of vancomycin-resistant enterococci, a double-blind, placebo-controlled Phase II trial of two doses of ramoplanin versus placebo showed proof of concept. A second Phase II trial also demonstrated the equivalence of ramoplanin compared with vancomycin for the treatment of C. difficile colitis. The clinical value and place in therapy of ramoplanin is dependent upon the results of Phase III trials addressing its utility in suppressing carriage of target organisms in the gastrointestinal tract or in the nares. more...
- Published
- 2006
96. The effect of ramoplanin coating on colonization by Staphylococcus aureus of catheter segments implanted subcutaneously in mice
- Author
-
Gabriella Romano, Beth P. Goldstein, Marisa Berti, and R Williams
- Subjects
Male ,Microbiology (medical) ,Staphylococcus aureus ,medicine.medical_specialty ,Micrococcaceae ,medicine.drug_class ,Antibiotics ,engineering.material ,medicine.disease_cause ,Peptides, Cyclic ,Catheterization ,Microbiology ,Mice ,Coating ,Depsipeptides ,Animals ,Medicine ,Pharmacology (medical) ,Colonization ,Antibacterial agent ,Pharmacology ,biology ,business.industry ,Ramoplanin ,biology.organism_classification ,Anti-Bacterial Agents ,Surgery ,Catheter ,Infectious Diseases ,engineering ,Female ,business ,medicine.drug - Abstract
We investigated the effect of ramoplanin coating on Staphylococcus aureus colonization of catheter segments in mice. Segments (1 cm in length) were inserted subcutaneously, 10(7) cfu of S. aureus were inoculated nearby at different times and segments were removed 24 or 48 h later. Uncoated segments were colonized with 10(4) to >10(5) cfu, whereas ramoplanin-coated segments had mean counts of more...
- Published
- 1997
- Full Text
- View/download PDF
97. Comparison of the efficacy of ramoplanin and vancomycin in both in vitro and in vivo models of clindamycin-induced Clostridium difficile infection
- Author
-
Jane Freeman, Mark H. Wilcox, Daniela Jabes, and Simon D. Baines
- Subjects
Microbiology (medical) ,Male ,Time Factors ,medicine.drug_class ,Antibiotics ,Hamster ,Biology ,Microbiology ,Random Allocation ,Vancomycin ,Cricetinae ,Depsipeptides ,medicine ,Animals ,Pharmacology (medical) ,Cecum ,Enterocolitis, Pseudomembranous ,Antibacterial agent ,Pharmacology ,Clostridioides difficile ,Clindamycin ,Ramoplanin ,Clostridium difficile ,Gastrointestinal Contents ,Anti-Bacterial Agents ,Metronidazole ,Disease Models, Animal ,Infectious Diseases ,medicine.drug - Abstract
Objectives: Treatment of Clostridium difficile infection (CDI) is limited primarily to either metronidazole or vancomycin. We compared vancomycin and a novel glycolipodepsipeptide, ramoplanin, in both hamster and in vitro gut models of clindamycin-induced CDI. Methods: We used an in vitro triple-stage chemostat model that simulates the human gut, and an in vivo hamster model, both primed with clindamycin. Results: Clindamycin exposure elicited symptomatic disease in the hamster model, and promoted C. difficile germination and toxin production in the gut model. C. difficile germination and toxin production were not associated with depletion of gut microflora in the gut model, but were temporarily associated with subinhibitory concentrations of clindamycin. Both ramoplanin and vancomycin were associated with rapid symptom resolution in the hamster model, and rapid toxin titre decrease in the in vitro gut model. In both models of CDI, vancomycin was associated with greater persistence of C. difficile spores. C. difficile spores were recovered significantly more often from the caecal contents of vancomycin-treated (n = 19/23) compared with ramoplanin-treated (n = 6/23) hamsters (P < 0.05). Conclusions: Results from the in vitro gut and hamster models were concordant. Ramoplanin and vancomycin were similarly effective at reducing cytotoxin production in the gut CDI model and in resolving symptoms in the hamster model. Ramoplanin may be more effective than vancomycin at killing spores and preventing spore recrudescence. These findings suggest a potential therapeutic role for ramoplanin in CDI that requires further clinical investigation. more...
- Published
- 2005
98. In vitro activity of ramoplanin against Clostridium difficile, including strains with reduced susceptibility to vancomycin or with resistance to metronidazole
- Author
-
Rodolfo Hernández Alonso, Teresa Peláez, Emilio Bouza, V García-Arias, A. Martín-López, Luis Alcalá, and Mercedes Marín
- Subjects
Pharmacology ,medicine.drug_class ,Clostridioides difficile ,Antibiotics ,Drug resistance ,Ramoplanin ,Microbial Sensitivity Tests ,Biology ,Clostridium difficile ,Glycopeptide ,Microbiology ,Metronidazole ,Infectious Diseases ,Vancomycin ,Susceptibility ,Depsipeptides ,Drug Resistance, Bacterial ,medicine ,Pharmacology (medical) ,Antibacterial agent ,medicine.drug - Abstract
We evaluated the in vitro activity of ramoplanin, an antimicrobial compound that inhibits cell wall synthesis by acting at the level of lipid intermediate formation, against Clostridium difficile. We included strains with reduced susceptibilities to vancomycin (vancomycin-intermediate [Van i ] strains) or with resistance to metronidazole (Mtz r ), in order to assess the potential utility of ramoplanin for the treatment of C. difficile -associated diarrhea. We tested the activity of ramoplanin against a total of 105 nonduplicate clinical isolates of toxigenic C. difficile , including 8 Van i isolates and 6 Mtz r isolates, obtained from our laboratory. Ramoplanin was active against all strains tested at concentrations ranging from 0.03 to 0.5 μg/ml (MICs at which 50 and 90% of isolates were inhibited, 0.25 μg/ml; geometric mean MIC, 0.22 μg/ml). All isolates, independently of their levels of susceptibility to vancomycin or metronidazole, were considered susceptible to ramoplanin (MICs, ≤0.5 μg/ml). more...
- Published
- 2005
99. Treatment of experimental endocarditis caused by multidrug resistant Enterococcus faecium with ramoplanin and penicillin.
- Author
-
Landman, David, Quale, John M., Burney, Sibte, Kreiswirth, Barry, Willey, Barbara M., Landman, D, Quale, J M, Burney, S, Kreiswirth, B, and Willey, B M
- Abstract
Antibiotic resistant strains of enterococci are being isolated with increasing frequency. Effective treatment of infections caused by Enterococcus faecium resistant to ampicillin, vancomycin and aminoglycosides has not been established. We studied the activity of ramoplanin, a new lipoglycopeptide antibiotic, against two strains of multidrug resistant E. faecium. In time kill studies, ramoplanin was bactericidal against both strains, but not in the presence of 50% serum. The combination of ramoplanin and penicillin was bactericidal even in the presence of serum. In rabbits with experimental endocarditis neither penicillin nor ramoplanin significantly reduced vegetation colony counts when given alone, although ramoplanin significantly reduced spleen and kidney bacterial counts of both strains. The combination of ramoplanin plus penicillin resulted in a significant reduction of vegetation bacterial counts (-3.2 and -3.7 log10 cfu/g for strains VA3 and MMC3, respectively, P < 0.01). All spleen cultures and 9 out of 10 kidney cultures from each strain were sterile following combination therapy. While ramoplanin will not be available for parenteral therapy, further research into the development of other lipoglycopeptide antibiotics is warranted. [ABSTRACT FROM AUTHOR] more...
- Published
- 1996
- Full Text
- View/download PDF
100. Ramoplanin inhibits bacterial transglycosylases by binding as a dimer to lipid II
- Author
-
Xiang-Yang Ye, Lan Chen, Suzanne Walker, Jeremiah S Helm, and Yanan Hu
- Subjects
Peptidyl transferase ,Penicillin binding proteins ,Stereochemistry ,Protein Conformation ,Dimer ,Muramoylpentapeptide Carboxypeptidase ,N-Acetylglucosaminyltransferases ,Biochemistry ,Peptides, Cyclic ,Catalysis ,chemistry.chemical_compound ,Colloid and Surface Chemistry ,Protein structure ,Bacterial Proteins ,Multienzyme Complexes ,Depsipeptides ,medicine ,Penicillin-Binding Proteins ,chemistry.chemical_classification ,Lipid II ,biology ,Dose-Response Relationship, Drug ,General Chemistry ,Ramoplanin ,Uridine Diphosphate N-Acetylmuramic Acid ,Anti-Bacterial Agents ,Kinetics ,Enzyme ,Mechanism of action ,chemistry ,Hexosyltransferases ,Peptidyl Transferases ,biology.protein ,medicine.symptom ,Carrier Proteins ,Dimerization ,medicine.drug ,Bacterial Outer Membrane Proteins - Abstract
Ramoplanin is a lipglycodepsipeptide antibiotic that inhibits peptidoglycan biosynthesis. Its mechanism of action has been the subject of debate. It was originally proposed to inhibit the MurG step of peptidoglycan synthesis by binding Lipid I. In this paper, we report that ramoplanin inhibits bacterial transglycosylases by binding to Lipid II, the substrate for these enzymes. The inhibition curves reveal that the inhibitory species has a stoichiometry of 2:1 ramoplanin:Lipid II. A Job titration confirms that ramoplanin binds as a dimer to Lipid II. The apparent dissociation constant is in the nanomolar range, which is unusually low given the nature of the interacting species. We show that Lipid II binding is coupled to the formation of a higher order species, which may explain the tight binding. We also present a testable model for the binding-competent dimeric conformation of ramoplanin. more...
- Published
- 2003
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.