1,248 results on '"O'Connor, Daniel P."'
Search Results
52. FIGURE 3 from Exercise-induced β2-adrenergic Receptor Activation Enhances the Antileukemic Activity of Expanded γδ T-Cells via DNAM-1 Upregulation and PVR/Nectin-2 Recognition
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Baker, Forrest L., primary, Smith, Kyle A., primary, Mylabathula, Preetesh L., primary, Zúñiga, Tiffany M., primary, Diak, Douglass M., primary, Batatinha, Helena, primary, Niemiro, Grace M., primary, Seckeler, Michael D., primary, Pedlar, Charles R., primary, O'Connor, Daniel P., primary, Colombo, Jamie, primary, Katsanis, Emmanuel, primary, and Simpson, Richard J., primary
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- 2024
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53. Supplementary Figure S2 from Exercise-induced β2-adrenergic Receptor Activation Enhances the Antileukemic Activity of Expanded γδ T-Cells via DNAM-1 Upregulation and PVR/Nectin-2 Recognition
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Baker, Forrest L., primary, Smith, Kyle A., primary, Mylabathula, Preetesh L., primary, Zúñiga, Tiffany M., primary, Diak, Douglass M., primary, Batatinha, Helena, primary, Niemiro, Grace M., primary, Seckeler, Michael D., primary, Pedlar, Charles R., primary, O'Connor, Daniel P., primary, Colombo, Jamie, primary, Katsanis, Emmanuel, primary, and Simpson, Richard J., primary
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- 2024
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54. FIGURE 5 from Exercise-induced β2-adrenergic Receptor Activation Enhances the Antileukemic Activity of Expanded γδ T-Cells via DNAM-1 Upregulation and PVR/Nectin-2 Recognition
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Baker, Forrest L., primary, Smith, Kyle A., primary, Mylabathula, Preetesh L., primary, Zúñiga, Tiffany M., primary, Diak, Douglass M., primary, Batatinha, Helena, primary, Niemiro, Grace M., primary, Seckeler, Michael D., primary, Pedlar, Charles R., primary, O'Connor, Daniel P., primary, Colombo, Jamie, primary, Katsanis, Emmanuel, primary, and Simpson, Richard J., primary
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- 2024
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55. FIGURE 2 from Exercise-induced β2-adrenergic Receptor Activation Enhances the Antileukemic Activity of Expanded γδ T-Cells via DNAM-1 Upregulation and PVR/Nectin-2 Recognition
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Baker, Forrest L., primary, Smith, Kyle A., primary, Mylabathula, Preetesh L., primary, Zúñiga, Tiffany M., primary, Diak, Douglass M., primary, Batatinha, Helena, primary, Niemiro, Grace M., primary, Seckeler, Michael D., primary, Pedlar, Charles R., primary, O'Connor, Daniel P., primary, Colombo, Jamie, primary, Katsanis, Emmanuel, primary, and Simpson, Richard J., primary
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- 2024
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56. FIGURE 4 from Exercise-induced β2-adrenergic Receptor Activation Enhances the Antileukemic Activity of Expanded γδ T-Cells via DNAM-1 Upregulation and PVR/Nectin-2 Recognition
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Baker, Forrest L., primary, Smith, Kyle A., primary, Mylabathula, Preetesh L., primary, Zúñiga, Tiffany M., primary, Diak, Douglass M., primary, Batatinha, Helena, primary, Niemiro, Grace M., primary, Seckeler, Michael D., primary, Pedlar, Charles R., primary, O'Connor, Daniel P., primary, Colombo, Jamie, primary, Katsanis, Emmanuel, primary, and Simpson, Richard J., primary
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- 2024
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57. TABLE 1 from Exercise-induced β2-adrenergic Receptor Activation Enhances the Antileukemic Activity of Expanded γδ T-Cells via DNAM-1 Upregulation and PVR/Nectin-2 Recognition
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Baker, Forrest L., primary, Smith, Kyle A., primary, Mylabathula, Preetesh L., primary, Zúñiga, Tiffany M., primary, Diak, Douglass M., primary, Batatinha, Helena, primary, Niemiro, Grace M., primary, Seckeler, Michael D., primary, Pedlar, Charles R., primary, O'Connor, Daniel P., primary, Colombo, Jamie, primary, Katsanis, Emmanuel, primary, and Simpson, Richard J., primary
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- 2024
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58. FIGURE 6 from Exercise-induced β2-adrenergic Receptor Activation Enhances the Antileukemic Activity of Expanded γδ T-Cells via DNAM-1 Upregulation and PVR/Nectin-2 Recognition
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Baker, Forrest L., primary, Smith, Kyle A., primary, Mylabathula, Preetesh L., primary, Zúñiga, Tiffany M., primary, Diak, Douglass M., primary, Batatinha, Helena, primary, Niemiro, Grace M., primary, Seckeler, Michael D., primary, Pedlar, Charles R., primary, O'Connor, Daniel P., primary, Colombo, Jamie, primary, Katsanis, Emmanuel, primary, and Simpson, Richard J., primary
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- 2024
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59. Exercise-induced β2-adrenergic receptor activation enhances the anti-leukemic activity of expanded γδ T-Cells via DNAM-1 upregulation and PVR/Nectin-2 recognition
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Baker, Forrest L, primary, Smith, Kyle A, additional, Mylabathula, Preetesh L, additional, Zuniga, Tiffany M, additional, Diak, Douglass M, additional, Batatinha, Helena, additional, Niemiro, Grace M, additional, Seckeler, Michael D, additional, Pedlar, Charles R, additional, O'Connor, Daniel P, additional, Colombo, Jamie N, additional, Katsanis, Emmanuel, additional, and Simpson, Richard J, additional
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- 2024
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60. Exploring qualities of ethnically diverse parents related to the healthy home environment of toddlers
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Cepni, Aliye B., Taylor, Ashley, Thompson, Debbe, Moran, Nancy E., Olvera, Norma, O'Connor, Daniel P., Johnston, Craig A., and Ledoux, Tracey A.
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- 2021
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61. The effects of ß₁ and ß₁₊₂ adrenergic receptor blockade on the exercise-induced mobilization and ex vivo expansion of virus-specific T cells : implications for cellular therapy and the anti-viral immune effects of exercise
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Kunz, Hawley E., Agha, Nadia H., Hussain, Maryam, LaVoy, Emily C., Smith, Kyle A., Mylabathula, Preteesh, Diak, Douglass, Baker, Forrest L., O’Connor, Daniel P., Bond, Richard A., Katsanis, Emmanuel, Bollard, Catherine M., and Simpson, Richard J.
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- 2020
62. A staged approach to address youth unresponsive to initial obesity intervention: a randomized clinical trial
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Arlinghaus, Katherine R., O’Connor, Daniel P., Ledoux, Tracey A., Hughes, Sheryl O., and Johnston, Craig A.
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- 2021
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63. Utilizing the wavelet transform’s structure in compressed sensing
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Dwork, Nicholas, O’Connor, Daniel, Baron, Corey A., Johnson, Ethan M. I., Kerr, Adam B., Pauly, John M., and Larson, Peder E. Z.
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- 2021
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64. Genetic loci associated with heart rate variability and their effects on cardiac disease risk.
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Nolte, Ilja M, Munoz, M Loretto, Tragante, Vinicius, Amare, Azmeraw T, Jansen, Rick, Vaez, Ahmad, von der Heyde, Benedikt, Avery, Christy L, Bis, Joshua C, Dierckx, Bram, van Dongen, Jenny, Gogarten, Stephanie M, Goyette, Philippe, Hernesniemi, Jussi, Huikari, Ville, Hwang, Shih-Jen, Jaju, Deepali, Kerr, Kathleen F, Kluttig, Alexander, Krijthe, Bouwe P, Kumar, Jitender, van der Laan, Sander W, Lyytikäinen, Leo-Pekka, Maihofer, Adam X, Minassian, Arpi, van der Most, Peter J, Müller-Nurasyid, Martina, Nivard, Michel, Salvi, Erika, Stewart, James D, Thayer, Julian F, Verweij, Niek, Wong, Andrew, Zabaneh, Delilah, Zafarmand, Mohammad H, Abdellaoui, Abdel, Albarwani, Sulayma, Albert, Christine, Alonso, Alvaro, Ashar, Foram, Auvinen, Juha, Axelsson, Tomas, Baker, Dewleen G, de Bakker, Paul IW, Barcella, Matteo, Bayoumi, Riad, Bieringa, Rob J, Boomsma, Dorret, Boucher, Gabrielle, Britton, Annie R, Christophersen, Ingrid, Dietrich, Andrea, Ehret, George B, Ellinor, Patrick T, Eskola, Markku, Felix, Janine F, Floras, John S, Franco, Oscar H, Friberg, Peter, Gademan, Maaike GJ, Geyer, Mark A, Giedraitis, Vilmantas, Hartman, Catharina A, Hemerich, Daiane, Hofman, Albert, Hottenga, Jouke-Jan, Huikuri, Heikki, Hutri-Kähönen, Nina, Jouven, Xavier, Junttila, Juhani, Juonala, Markus, Kiviniemi, Antti M, Kors, Jan A, Kumari, Meena, Kuznetsova, Tatiana, Laurie, Cathy C, Lefrandt, Joop D, Li, Yong, Li, Yun, Liao, Duanping, Limacher, Marian C, Lin, Henry J, Lindgren, Cecilia M, Lubitz, Steven A, Mahajan, Anubha, McKnight, Barbara, Zu Schwabedissen, Henriette Meyer, Milaneschi, Yuri, Mononen, Nina, Morris, Andrew P, Nalls, Mike A, Navis, Gerjan, Neijts, Melanie, Nikus, Kjell, North, Kari E, O'Connor, Daniel T, Ormel, Johan, Perz, Siegfried, Peters, Annette, and Psaty, Bruce M
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Humans ,Heart Diseases ,Genetic Predisposition to Disease ,RGS Proteins ,Potassium Channels ,Muscle Proteins ,Risk Factors ,Cohort Studies ,Blood Pressure ,Heart Rate ,Polymorphism ,Single Nucleotide ,Quantitative Trait Loci ,European Continental Ancestry Group ,Genome-Wide Association Study ,Hyperpolarization-Activated Cyclic Nucleotide-Gated Channels ,Cardiovascular ,Genetics ,Heart Disease - Abstract
Reduced cardiac vagal control reflected in low heart rate variability (HRV) is associated with greater risks for cardiac morbidity and mortality. In two-stage meta-analyses of genome-wide association studies for three HRV traits in up to 53,174 individuals of European ancestry, we detect 17 genome-wide significant SNPs in eight loci. HRV SNPs tag non-synonymous SNPs (in NDUFA11 and KIAA1755), expression quantitative trait loci (eQTLs) (influencing GNG11, RGS6 and NEO1), or are located in genes preferentially expressed in the sinoatrial node (GNG11, RGS6 and HCN4). Genetic risk scores account for 0.9 to 2.6% of the HRV variance. Significant genetic correlation is found for HRV with heart rate (-0.74g
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- 2017
65. iPSCORE: A Resource of 222 iPSC Lines Enabling Functional Characterization of Genetic Variation across a Variety of Cell Types
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Panopoulos, Athanasia D, D'Antonio, Matteo, Benaglio, Paola, Williams, Roy, Hashem, Sherin I, Schuldt, Bernhard M, DeBoever, Christopher, Arias, Angelo D, Garcia, Melvin, Nelson, Bradley C, Harismendy, Olivier, Jakubosky, David A, Donovan, Margaret KR, Greenwald, William W, Farnam, KathyJean, Cook, Megan, Borja, Victor, Miller, Carl A, Grinstein, Jonathan D, Drees, Frauke, Okubo, Jonathan, Diffenderfer, Kenneth E, Hishida, Yuriko, Modesto, Veronica, Dargitz, Carl T, Feiring, Rachel, Zhao, Chang, Aguirre, Aitor, McGarry, Thomas J, Matsui, Hiroko, Li, He, Reyna, Joaquin, Rao, Fangwen, O'Connor, Daniel T, Yeo, Gene W, Evans, Sylvia M, C., Neil, Jepsen, Kristen, Nariai, Naoki, Müller, Franz-Josef, Goldstein, Lawrence SB, Belmonte, Juan Carlos Izpisua, Adler, Eric, Loring, Jeanne F, Berggren, W Travis, D'Antonio-Chronowska, Agnieszka, Smith, Erin N, and Frazer, Kelly A
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Biological Sciences ,Genetics ,Stem Cell Research - Induced Pluripotent Stem Cell - Non-Human ,Clinical Research ,Stem Cell Research - Induced Pluripotent Stem Cell - Human ,Human Genome ,Stem Cell Research ,Stem Cell Research - Induced Pluripotent Stem Cell ,Aetiology ,2.1 Biological and endogenous factors ,Arrhythmias ,Cardiac ,Cell Differentiation ,Cell Line ,Cellular Reprogramming ,Databases ,Factual ,Genetic Association Studies ,Genetic Variation ,Genotype ,High-Throughput Nucleotide Sequencing ,Humans ,Induced Pluripotent Stem Cells ,Multigene Family ,Myocytes ,Cardiac ,Oligonucleotide Array Sequence Analysis ,Phenotype ,Polymorphism ,Single Nucleotide ,Racial Groups ,GWAS ,KCNH2 ,LQT2 ,NHLBI Next Gen ,cardiac disease ,iPSC ,iPSC-derived cardiomyocytes ,iPSCORE ,molecular traits ,physiological traits ,Biochemistry and Cell Biology ,Clinical Sciences ,Biochemistry and cell biology - Abstract
Large-scale collections of induced pluripotent stem cells (iPSCs) could serve as powerful model systems for examining how genetic variation affects biology and disease. Here we describe the iPSCORE resource: a collection of systematically derived and characterized iPSC lines from 222 ethnically diverse individuals that allows for both familial and association-based genetic studies. iPSCORE lines are pluripotent with high genomic integrity (no or low numbers of somatic copy-number variants) as determined using high-throughput RNA-sequencing and genotyping arrays, respectively. Using iPSCs from a family of individuals, we show that iPSC-derived cardiomyocytes demonstrate gene expression patterns that cluster by genetic background, and can be used to examine variants associated with physiological and disease phenotypes. The iPSCORE collection contains representative individuals for risk and non-risk alleles for 95% of SNPs associated with human phenotypes through genome-wide association studies. Our study demonstrates the utility of iPSCORE for examining how genetic variants influence molecular and physiological traits in iPSCs and derived cell lines.
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- 2017
66. Identification of novel loci affecting circulating chromogranins and related peptides
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Benyamin, Beben, Maihofer, Adam X, Schork, Andrew J, Hamilton, Bruce A, Rao, Fangwen, Schmid-Schönbein, Geert W, Zhang, Kuixing, Mahata, Manjula, Stridsberg, Mats, Schork, Nicholas J, Biswas, Nilima, Hook, Vivian Y, Wei, Zhiyun, Montgomery, Grant W, Martin, Nicholas G, Nievergelt, Caroline M, Whitfield, John B, and O’Connor, Daniel T
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Adolescent ,Adrenal Glands ,Adult ,Aged ,Animals ,Australia ,Biomarkers ,Catecholamines ,Cells ,Cultured ,Chromaffin Cells ,Chromogranin A ,Factor XII ,Female ,Genetic Loci ,Genome-Wide Association Study ,Humans ,Hypertension ,Kallikreins ,Male ,Mice ,Middle Aged ,Peptide Fragments ,Rats ,United States ,Young Adult ,Biological Sciences ,Medical and Health Sciences ,Genetics & Heredity - Abstract
Chromogranins are pro-hormone secretory proteins released from neuroendocrine cells, with effects on control of blood pressure. We conducted a genome-wide association study for plasma catestatin, the catecholamine release inhibitory peptide derived from chromogranin A (CHGA), and other CHGA- or chromogranin B (CHGB)-related peptides, in 545 US and 1252 Australian subjects. This identified loci on chromosomes 4q35 and 5q34 affecting catestatin concentration (P = 3.40 × 10-30 for rs4253311 and 1.85 × 10-19 for rs2731672, respectively). Genes in these regions include the proteolytic enzymes kallikrein (KLKB1) and Factor XII (F12). In chromaffin cells, CHGA and KLKB1 proteins co-localized in catecholamine storage granules. In vitro, kallikrein cleaved recombinant human CHGA to catestatin, verified by mass spectrometry. The peptide identified from this digestion (CHGA360-373) selectively inhibited nicotinic cholinergic stimulated catecholamine release from chromaffin cells. A proteolytic cascade involving kallikrein and Factor XII cleaves chromogranins to active compounds both in vivo and in vitro.
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- 2017
67. Inflammation of the nasal mucosa is associated with susceptibility to experimental pneumococcal challenge in older adults
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Urban, Britta C., Gonçalves, André N.A., Loukov, Dessi, Passos, Fernando M., Reiné, Jesús, Gonzalez-Dias, Patrícia, Solórzano, Carla, Mitsi, Elena, Nikolaou, Elissavet, O’Connor, Daniel, Collins, Andrea M., Adler, Hugh, Pollard, Andrew, Rylance, Jamie, Gordon, Stephen B., Jochems, Simon P., Nakaya, Helder I., and Ferreira, Daniela M.
- Abstract
Streptococcus pneumoniaecolonization in the upper respiratory tract is linked to pneumococcal disease development, predominantly affecting young children and older adults. As the global population ages and comorbidities increase, there is a heightened concern about this infection. We investigated the immunological responses of older adults to pneumococcal-controlled human infection by analyzing the cellular composition and gene expression in the nasal mucosa. Our comparative analysis with data from a concurrent study in younger adults revealed distinct gene expression patterns in older individuals susceptible to colonization, highlighted by neutrophil activation and elevated levels of CXCL9 and CXCL10. Unlike younger adults challenged with pneumococcus, older adults did not show recruitment of monocytes into the nasal mucosa following nasal colonization. However, older adults who were protected from colonization showed increased degranulation of cluster of differentiation 8+ T cells, both before and after pneumococcal challenge. These findings suggest age-associated cellular changes, in particular enhanced mucosal inflammation, that may predispose older adults to pneumococcal colonization.
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- 2024
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68. The value of patient-reported outcomes in early-phase clinical trials
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Retzer, Ameeta, Aiyegbusi, Olalekan Lee, Rowe, Anna, Newsome, Philip N., Douglas-Pugh, Jessica, Khan, Sheeba, Mittal, Saloni, Wilson, Roger, O’Connor, Daniel, Campbell, Lisa, Mitchell, Sandra A., and Calvert, Melanie
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- 2022
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69. The effects of normoxic endurance exercise on erythropoietin (EPO) production and the impact of selective β1 and non-selective β1 + β2 adrenergic receptor blockade
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Azadan, Rod J., Agha, Nadia H., Kunz, Hawley E., Baker, Forrest L., Mylabathula, Preteesh L., Ledoux, Tracy A., O’Connor, Daniel P., Pedlar, Charles R., and Simpson, Richard J.
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- 2021
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70. Association between generational status and smoking behaviors before and during pregnancy among Hispanic women
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Daundasekara, Sajeevika Saumali, O'Connor, Daniel P., Cardoso, Jodi Berger, Ledoux, Tracey, and Hernandez, Daphne C.
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- 2020
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71. Polymorphisms at the F12 and KLKB1 loci have significant trait association with activation of the renin-angiotensin system
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Biswas, Nilima, Maihofer, Adam X, Mir, Saiful Anam, Rao, Fangwen, Zhang, Kuixing, Khandrika, Srikrishna, Mahata, Manjula, Friese, Ryan S, Hightower, C Makena, Mahata, Sushil K, Baker, Dewleen G, Nievergelt, Caroline M, Vaingankar, Sucheta M, and O’Connor, Daniel T
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Cardiovascular ,Biotechnology ,Genetics ,Kidney Disease ,Hypertension ,2.1 Biological and endogenous factors ,Aetiology ,Adolescent ,Adult ,Aged ,Alleles ,Angiotensin I ,Angiotensinogen ,Animals ,Blood Pressure ,Cell Cycle Proteins ,Cell Line ,Factor XIIa ,Gene Expression Regulation ,Genetic Loci ,Genome-Wide Association Study ,Genotyping Techniques ,Humans ,Juxtaglomerular Apparatus ,Kallikreins ,Male ,Mice ,Middle Aged ,Nerve Tissue Proteins ,Polymorphism ,Single Nucleotide ,Prekallikrein ,Renin ,Renin-Angiotensin System ,Serine Endopeptidases ,Transferases ,Young Adult ,FXIIa ,Kallikrein/KAL ,rs3733402 ,rs1801020 ,PTSD ,Medical Biochemistry and Metabolomics ,Oncology and Carcinogenesis ,Genetics & Heredity - Abstract
BackgroundPlasma coagulation Factor XIIa (Hageman factor; encoded by F12) and kallikrein (KAL or Fletcher factor; encoded by KLKB1) are proteases of the kallikerin-kinin system involved in converting the inactive circulating prorenin to renin. Renin is a key enzyme in the formation of angiotensin II, which regulates blood pressure, fluid and electrolyte balance and is a biomarker for cardiovascular, metabolic and renal function. The renin-angiotensin system is implicated in extinction learning in posttraumatic stress disorder.Methods & resultsActive plasma renin was measured from two independent cohorts- civilian twins and siblings, as well as U.S. Marines, for a total of 1,180 subjects. Genotyping these subjects revealed that the carriers of the minor alleles at the two loci- F12 and KLKB1 had a significant association with reduced levels of active plasma renin. Meta-analyses confirmed the association across cohorts. In vitro studies verified digestion of human recombinant pro-renin by kallikrein (KAL) to generate active renin. Subsequently, the active renin was able to digest the synthetic substrate angiotensinogen to angiotensin-I. Examination of mouse juxtaglomerular cell line and mouse kidney sections showed co-localization of KAL with renin. Expression of either REN or KLKB1 was regulated in cell line and rodent models of hypertension in response to oxidative stress, interleukin or arterial blood pressure changes.ConclusionsThe functional variants of KLKB1 (rs3733402) and F12 (rs1801020) disrupted the cascade of enzymatic events, resulting in diminished formation of active renin. Using genetic, cellular and molecular approaches we found that conversion of zymogen prorenin to renin was influenced by these polymorphisms. The study suggests that the variant version of protease factor XIIa due to the amino acid substitution had reduced ability to activate prekallikrein to KAL. As a result KAL has reduced efficacy in converting prorenin to renin and this step of the pathway leading to activation of renin affords a potential therapeutic target.
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- 2016
72. Di-chromatic interpolation of magnetic resonance metabolic images
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Dwork, Nicholas, Gordon, Jeremy W., Tang, Shuyu, O’Connor, Daniel, Hansen, Esben Søvsø Szocska, Laustsen, Christoffer, and Larson, Peder E. Z.
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- 2021
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73. Sensory and decision-related activity propagate in a cortical feedback loop during touch perception
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Kwon, Sung Eun, Yang, Hongdian, Minamisawa, Genki, and O'Connor, Daniel H
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Biomedical and Clinical Sciences ,Neurosciences ,Behavioral and Social Science ,Basic Behavioral and Social Science ,1.1 Normal biological development and functioning ,Underpinning research ,Neurological ,Action Potentials ,Animals ,Choice Behavior ,Female ,Male ,Mice ,Inbred C57BL ,Mice ,Transgenic ,Models ,Animal ,Neurons ,Somatosensory Cortex ,Touch ,Touch Perception ,Psychology ,Cognitive Sciences ,Neurology & Neurosurgery ,Biological psychology - Abstract
The brain transforms physical sensory stimuli into meaningful perceptions. In animals making choices about sensory stimuli, neuronal activity in successive cortical stages reflects a progression from sensation to decision. Feedforward and feedback pathways connecting cortical areas are critical for this transformation. However, the computational functions of these pathways are poorly understood because pathway-specific activity has rarely been monitored during a perceptual task. Using cellular-resolution, pathway-specific imaging, we measured neuronal activity across primary (S1) and secondary (S2) somatosensory cortices of mice performing a tactile detection task. S1 encoded the stimulus better than S2, while S2 activity more strongly reflected perceptual choice. S1 neurons projecting to S2 fed forward activity that predicted choice. Activity encoding touch and choice propagated in an S1-S2 loop along feedforward and feedback axons. Our results suggest that sensory inputs converge into a perceptual outcome as feedforward computations are reinforced in a feedback loop.
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- 2016
74. A One Health overview, facilitating advances in comparative medicine and translational research
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Stroud, Cheryl, Dmitriev, Igor, Kashentseva, Elena, Bryan, Jeffrey N, Curiel, David T, Rindt, Hans, Reinero, Carol, Henry, Carolyn J, Bergman, Philip J, Mason, Nicola J, Gnanandarajah, Josephine S, Engiles, Julie B, Gray, Falon, Laughlin, Danielle, Gaurnier-Hausser, Anita, Wallecha, Anu, Huebner, Margie, Paterson, Yvonne, O’Connor, Daniel, Treml, Laura S, Stannard, James P, Cook, James L, Jacobs, Marc, Wyckoff, Gerald J, Likins, Lee, Sabbagh, Ubadah, Skaff, Andrew, Guloy, Amado S, Hays, Harlen D, LeBlanc, Amy K, Coates, Joan R, Katz, Martin L, Lyons, Leslie A, Johnson, Gayle C, Johnson, Gary S, O’Brien, Dennis P, Duan, Dongsheng, Calvet, James P, Gandolfi, Barbara, Baron, David A, Weiss, Mark L, Webster, Debra A, Karanu, Francis N, Robb, Edward J, and Harman, Robert J
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Nursing ,Health Sciences ,Pediatric ,Rare Diseases ,Orphan Drug ,Vaccine Related ,Immunization ,Development of treatments and therapeutic interventions ,5.9 Resources and infrastructure (treatment development) ,Good Health and Well Being - Abstract
Table of contentsA1 One health advances and successes in comparative medicine and translational researchCheryl StroudA2 Dendritic cell-targeted gorilla adenoviral vector for cancer vaccination for canine melanomaIgor Dmitriev, Elena Kashentseva, Jeffrey N. Bryan, David T. CurielA3 Viroimmunotherapy for malignant melanoma in the companion dog modelJeffrey N. Bryan, David Curiel, Igor Dmitriev, Elena Kashentseva, Hans Rindt, Carol Reinero, Carolyn J. HenryA4 Of mice and men (and dogs!): development of a commercially licensed xenogeneic DNA vaccine for companion animals with malignant melanomaPhilip J. BergmanA5 Successful immunotherapy with a recombinant HER2-expressing Listeria monocytogenes in dogs with spontaneous osteosarcoma paves the way for advances in pediatric osteosarcomaNicola J. Mason, Josephine S. Gnanandarajah, Julie B. Engiles, Falon Gray, Danielle Laughlin, Anita Gaurnier-Hausser, Anu Wallecha, Margie Huebner, Yvonne PatersonA6 Human clinical development of ADXS-HER2Daniel O'ConnorA7 Leveraging use of data for both human and veterinary benefitLaura S. TremlA8 Biologic replacement of the knee: innovations and early clinical resultsJames P. StannardA9 Mizzou BioJoint Center: a translational success storyJames L. CookA10 University and industry translational partnership: from the lab to commercializationMarc JacobsA11 Beyond docking: an evolutionarily guided OneHealth approach to drug discoveryGerald J. Wyckoff, Lee Likins, Ubadah Sabbagh, Andrew SkaffA12 Challenges and opportunities for data applications in animal health: from precision medicine to precision husbandryAmado S. GuloyA13 A cloud-based programmable platform for healthHarlen D. HaysA14 Comparative oncology: One Health in actionAmy K. LeBlancA15 Companion animal diseases bridge the translational gap for human neurodegenerative diseaseJoan R. Coates, Martin L. Katz, Leslie A. Lyons, Gayle C. Johnson, Gary S. Johnson, Dennis P. O'BrienA16 Duchenne muscular dystrophy gene therapyDongsheng DuanA17 Polycystic kidney disease: cellular mechanisms to emerging therapiesJames P. CalvetA18 The domestic cat as a large animal model for polycystic kidney diseaseLeslie A. Lyons, Barbara GandolfiA19 The support of basic and clinical research by the Polycystic Kidney Disease FoundationDavid A. BaronA20 Using naturally occurring large animal models of human disease to enable clinical translation: treatment of arthritis using autologous stromal vascular fraction in dogsMark L. WeissA21 Regulatory requirements regarding clinical use of human cells, tissues, and tissue-based productsDebra A. WebsterA22 Regenerative medicine approaches to Type 1 diabetes treatmentFrancis N. KaranuA23 The zoobiquity of canine diabetes mellitus, man's best friend is a friend indeed-islet transplantationEdward J. RobbA24 One Medicine: a development model for cellular therapy of diabetesRobert J. Harman.
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- 2016
75. A comprehensive formulation for volumetric modulated arc therapy planning.
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Nguyen, Dan, Lyu, Qihui, Ruan, Dan, O'Connor, Daniel, Low, Daniel A, and Sheng, Ke
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Humans ,Glioblastoma ,Head and Neck Neoplasms ,Brain Neoplasms ,Lung Neoplasms ,Radiotherapy Dosage ,Radiotherapy Planning ,Computer-Assisted ,Algorithms ,Radiotherapy ,Intensity-Modulated ,Clinical Research ,Cancer ,Bioengineering ,volumetric modulated arc therapy ,non-greedy ,non-heuristic ,direct aperture optimization ,Other Physical Sciences ,Biomedical Engineering ,Oncology and Carcinogenesis ,Nuclear Medicine & Medical Imaging - Abstract
PurposeVolumetric modulated arc therapy (VMAT) is a widely employed radiation therapy technique, showing comparable dosimetry to static beam intensity modulated radiation therapy (IMRT) with reduced monitor units and treatment time. However, the current VMAT optimization has various greedy heuristics employed for an empirical solution, which jeopardizes plan consistency and quality. The authors introduce a novel direct aperture optimization method for VMAT to overcome these limitations.MethodsThe comprehensive VMAT (comVMAT) planning was formulated as an optimization problem with an L2-norm fidelity term to penalize the difference between the optimized dose and the prescribed dose, as well as an anisotropic total variation term to promote piecewise continuity in the fluence maps, preparing it for direct aperture optimization. A level set function was used to describe the aperture shapes and the difference between aperture shapes at adjacent angles was penalized to control MLC motion range. A proximal-class optimization solver was adopted to solve the large scale optimization problem, and an alternating optimization strategy was implemented to solve the fluence intensity and aperture shapes simultaneously. Single arc comVMAT plans, utilizing 180 beams with 2° angular resolution, were generated for a glioblastoma multiforme case, a lung (LNG) case, and two head and neck cases-one with three PTVs (H&N3PTV) and one with foue PTVs (H&N4PTV)-to test the efficacy. The plans were optimized using an alternating optimization strategy. The plans were compared against the clinical VMAT (clnVMAT) plans utilizing two overlapping coplanar arcs for treatment.ResultsThe optimization of the comVMAT plans had converged within 600 iterations of the block minimization algorithm. comVMAT plans were able to consistently reduce the dose to all organs-at-risk (OARs) as compared to the clnVMAT plans. On average, comVMAT plans reduced the max and mean OAR dose by 6.59% and 7.45%, respectively, of the prescription dose. Reductions in max dose and mean dose were as high as 14.5 Gy in the LNG case and 15.3 Gy in the H&N3PTV case. PTV coverages measured by D95, D98, and D99 were within 0.25% of the prescription dose. By comprehensively optimizing all beams, the comVMAT optimizer gained the freedom to allow some selected beams to deliver higher intensities, yielding a dose distribution that resembles a static beam IMRT plan with beam orientation optimization.ConclusionsThe novel nongreedy VMAT approach simultaneously optimizes all beams in an arc and then directly generates deliverable apertures. The single arc VMAT approach thus fully utilizes the digital Linac's capability in dose rate and gantry rotation speed modulation. In practice, the new single VMAT algorithm generates plans superior to existing VMAT algorithms utilizing two arcs.
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- 2016
76. A novel software and conceptual design of the hardware platform for intensity modulated radiation therapy.
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Nguyen, Dan, Ruan, Dan, O'Connor, Daniel, Woods, Kaley, Low, Daniel A, Boucher, Salime, and Sheng, Ke
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Humans ,Neoplasms ,Radiotherapy Planning ,Computer-Assisted ,Equipment Design ,Algorithms ,Software ,Radiotherapy ,Intensity-Modulated ,Cancer ,Bioengineering ,sparse orthogonal collimator ,rectangular representation ,direct aperture optimization ,IMRT ,Other Physical Sciences ,Biomedical Engineering ,Oncology and Carcinogenesis ,Nuclear Medicine & Medical Imaging - Abstract
PurposeTo deliver high quality intensity modulated radiotherapy (IMRT) using a novel generalized sparse orthogonal collimators (SOCs), the authors introduce a novel direct aperture optimization (DAO) approach based on discrete rectangular representation.MethodsA total of seven patients-two glioblastoma multiforme, three head & neck (including one with three prescription doses), and two lung-were included. 20 noncoplanar beams were selected using a column generation and pricing optimization method. The SOC is a generalized conventional orthogonal collimators with N leaves in each collimator bank, where N = 1, 2, or 4. SOC degenerates to conventional jaws when N = 1. For SOC-based IMRT, rectangular aperture optimization (RAO) was performed to optimize the fluence maps using rectangular representation, producing fluence maps that can be directly converted into a set of deliverable rectangular apertures. In order to optimize the dose distribution and minimize the number of apertures used, the overall objective was formulated to incorporate an L2 penalty reflecting the difference between the prescription and the projected doses, and an L1 sparsity regularization term to encourage a low number of nonzero rectangular basis coefficients. The optimization problem was solved using the Chambolle-Pock algorithm, a first-order primal-dual algorithm. Performance of RAO was compared to conventional two-step IMRT optimization including fluence map optimization and direct stratification for multileaf collimator (MLC) segmentation (DMS) using the same number of segments. For the RAO plans, segment travel time for SOC delivery was evaluated for the N = 1, N = 2, and N = 4 SOC designs to characterize the improvement in delivery efficiency as a function of N.ResultsComparable PTV dose homogeneity and coverage were observed between the RAO and the DMS plans. The RAO plans were slightly superior to the DMS plans in sparing critical structures. On average, the maximum and mean critical organ doses were reduced by 1.94% and 1.44% of the prescription dose. The average number of delivery segments was 12.68 segments per beam for both the RAO and DMS plans. The N = 2 and N = 4 SOC designs were, on average, 1.56 and 1.80 times more efficient than the N = 1 SOC design to deliver. The mean aperture size produced by the RAO plans was 3.9 times larger than that of the DMS plans.ConclusionsThe DAO and dose domain optimization approach enabled high quality IMRT plans using a low-complexity collimator setup. The dosimetric quality is comparable or slightly superior to conventional MLC-based IMRT plans using the same number of delivery segments. The SOC IMRT delivery efficiency can be significantly improved by increasing the leaf numbers, but the number is still significantly lower than the number of leaves in a typical MLC.
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- 2016
77. Origins of choice-related activity in mouse somatosensory cortex
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Yang, Hongdian, Kwon, Sung E, Severson, Kyle S, and O'Connor, Daniel H
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Biomedical and Clinical Sciences ,Neurosciences ,Pain Research ,Behavioral and Social Science ,Basic Behavioral and Social Science ,Underpinning research ,1.1 Normal biological development and functioning ,Neurological ,Animals ,Behavior ,Animal ,Choice Behavior ,Electrophysiological Phenomena ,Female ,Male ,Mechanoreceptors ,Mice ,Mice ,Inbred C57BL ,Neurons ,Optogenetics ,Patch-Clamp Techniques ,Psychomotor Performance ,Signal Detection ,Psychological ,Somatosensory Cortex ,Touch Perception ,Ventral Thalamic Nuclei ,Vibrissae ,Psychology ,Cognitive Sciences ,Neurology & Neurosurgery ,Biological psychology - Abstract
During perceptual decisions about faint or ambiguous sensory stimuli, even identical stimuli can produce different choices. Spike trains from sensory cortex neurons can predict trial-to-trial variability in choice. Choice-related spiking is widely studied as a way to link cortical activity to perception, but its origins remain unclear. Using imaging and electrophysiology, we found that mouse primary somatosensory cortex neurons showed robust choice-related activity during a tactile detection task. Spike trains from primary mechanoreceptive neurons did not predict choices about identical stimuli. Spike trains from thalamic relay neurons showed highly transient, weak choice-related activity. Intracellular recordings in cortex revealed a prolonged choice-related depolarization in most neurons that was not accounted for by feed-forward thalamic input. Top-down axons projecting from secondary to primary somatosensory cortex signaled choice. An intracellular measure of stimulus sensitivity determined which neurons converted choice-related depolarization into spiking. Our results reveal how choice-related spiking emerges across neural circuits and within single neurons.
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- 2016
78. The effects of β1 and β1+2 adrenergic receptor blockade on the exercise-induced mobilization and ex vivo expansion of virus-specific T cells: implications for cellular therapy and the anti-viral immune effects of exercise
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Kunz, Hawley E., Agha, Nadia H., Hussain, Maryam, LaVoy, Emily C., Smith, Kyle A., Mylabathula, Preteesh, Diak, Douglass, Baker, Forrest L., O’Connor, Daniel P., Bond, Richard A., Katsanis, Emmanuel, Bollard, Catherine M., and Simpson, Richard J.
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- 2020
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79. On the equivalence of the primal-dual hybrid gradient method and Douglas–Rachford splitting
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O’Connor, Daniel and Vandenberghe, Lieven
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- 2020
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80. Genomic predictors of combat stress vulnerability and resilience in U.S. Marines: A genome-wide association study across multiple ancestries implicates PRTFDC1 as a potential PTSD gene
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Nievergelt, Caroline M, Maihofer, Adam X, Mustapic, Maja, Yurgil, Kate A, Schork, Nicholas J, Miller, Mark W, Logue, Mark W, Geyer, Mark A, Risbrough, Victoria B, O’Connor, Daniel T, and Baker, Dewleen G
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Genetics ,Post-Traumatic Stress Disorder (PTSD) ,Prevention ,Mental Health ,Clinical Research ,Human Genome ,Brain Disorders ,Anxiety Disorders ,Serious Mental Illness ,Aetiology ,2.1 Biological and endogenous factors ,Mental health ,Adolescent ,Adult ,Combat Disorders ,Genetic Predisposition to Disease ,Genome-Wide Association Study ,Genotype ,Humans ,Hypoxanthine Phosphoribosyltransferase ,Male ,Middle Aged ,Military Personnel ,Polymorphism ,Single Nucleotide ,Resilience ,Psychological ,Stress Disorders ,Post-Traumatic ,Young Adult ,GWAS ,Meta-analysis ,PTSD ,Ancestry ,Polygenic risk score ,Trauma ,GxE ,Bipolar disorder ,Pleiotropy ,Medical and Health Sciences ,Psychology and Cognitive Sciences ,Psychiatry - Abstract
BackgroundResearch on the etiology of post-traumatic stress disorder (PTSD) has rapidly matured, moving from candidate gene studies to interrogation of the entire human genome in genome-wide association studies (GWAS). Here we present the results of a GWAS performed on samples from combat-exposed U.S. Marines and Sailors from the Marine Resiliency Study (MRS) scheduled for deployment to Iraq and/or Afghanistan. The MRS is a large, prospective study with longitudinal follow-up designed to identify risk and resiliency factors for combat-induced stress-related symptoms. Previously implicated PTSD risk loci from the literature and polygenic risk scores across psychiatric disorders were also evaluated in the MRS cohort.MethodsParticipants (N=3494) were assessed using the Clinician-Administered PTSD Scale and diagnosed using the DSM-IV diagnostic criterion. Subjects with partial and/or full PTSD diagnosis were called cases, all other subjects were designated controls, and study-wide maximum CAPS scores were used for longitudinal assessments. Genomic DNA was genotyped on the Illumina HumanOmniExpressExome array. Individual genetic ancestry was determined by supervised cluster analysis for subjects of European, African, Hispanic/Native American, and other descent. To test for association of SNPs with PTSD, logistic regressions were performed within each ancestry group and results were combined in meta-analyses. Measures of childhood and adult trauma were included to test for gene-by-environment (GxE) interactions. Polygenic risk scores from the Psychiatric Genomic Consortium were used for major depressive disorder (MDD), bipolar disorder (BPD), and schizophrenia (SCZ).ResultsThe array produced >800K directly genotyped and >21M imputed markers in 3494 unrelated, trauma-exposed males, of which 940 were diagnosed with partial or full PTSD. The GWAS meta-analysis identified the phosphoribosyl transferase domain containing 1 gene (PRTFDC1) as a genome-wide significant PTSD locus (rs6482463; OR=1.47, SE=0.06, p=2.04×10(-9)), with a similar effect across ancestry groups. Association of PRTFDC1 with PTSD in an independent military cohort showed some evidence for replication. Loci with suggestive evidence of association (n=25 genes, p
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- 2015
81. Regarding the 'Comments on 'Near-field interference for the unidirectional excitation of electromagnetic guided modes' ' by Lee et al
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Rodríguez-Fortuño, Francisco J., Marino, Giuseppe, Ginzburg, Pavel, O'Connor, Daniel, Martínez, Alejandro, Wurtz, Gregory A., and Zayats, Anatoly V.
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Physics - Optics - Abstract
We would like to clarify the misunderstanding caused by comment [arXiv:1306.5068 (2013)] on our article [Science 340, 328 (2013)]. The vectorial near-field interference effect described in our article is a fundamental physical process valid for all kinds of waves, both photonic and plasmonic, and the discovery of this effect is the main topic of the paper. The experiment using a slit in a metal film was one possible practical realization, but the effect has recently been experimentally validated in several other structures, as described in this reply., Comment: 1 page
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- 2013
82. Teaching Parents about Responsive Feeding through a Vicarious Learning Video: A Pilot Randomized Controlled Trial
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Ledoux, Tracey, Robinson, Jessica, Baranowski, Tom, and O'Connor, Daniel P.
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The American Academy of Pediatrics and World Health Organization recommend responsive feeding (RF) to promote healthy eating behaviors in early childhood. This project developed and tested a vicarious learning video to teach parents RF practices. A RF vicarious learning video was developed using community-based participatory research methods. Fifty parents of preschoolers were randomly assigned to watch Happier Meals or a control video about education. Knowledge and beliefs about RF practices were measured 1 week before and immediately after intervention. Experimental group participants also completed measures of narrative engagement and video acceptability. Seventy-four percent of the sample was White, 90% had at least a college degree, 96% were married, and 88% made >$50,000/year. RF knowledge increased (p = 0.03) and positive beliefs about some unresponsive feeding practices decreased (ps < 0.05) more among experimental than control parents. Knowledge and belief changes were associated with video engagement (ps < 0.05). Parents perceived Happier Meals as highly relevant, applicable, and informative. Community-based participatory research methods were instrumental in developing this vicarious learning video, with preliminary evidence of effectiveness in teaching parents about RF. Happier Meals is freely available for parents or community health workers to use when working with families to promote healthy eating behaviors in early childhood.
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- 2018
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83. Research on rare diseases: ten years of progress and challenges at IRDiRC
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Monaco, Lucia, Zanello, Galliano, Baynam, Gareth, Jonker, Anneliene H., Julkowska, Daria, Hartman, Adam L., O’Connor, Daniel, Wang, Chiuhui Mary, Wong-Rieger, Durhane, and Pearce, David A.
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- 2022
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84. Distinct patterns of within-host virus populations between two subgroups of human respiratory syncytial virus
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Lin, Gu-Lung, Drysdale, Simon B., Snape, Matthew D., O’Connor, Daniel, Brown, Anthony, MacIntyre-Cockett, George, Mellado-Gomez, Esther, de Cesare, Mariateresa, Bonsall, David, Ansari, M. Azim, Öner, Deniz, Aerssens, Jeroen, Butler, Christopher, Bont, Louis, Openshaw, Peter, Martinón-Torres, Federico, Nair, Harish, Bowden, Rory, Golubchik, Tanya, and Pollard, Andrew J.
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- 2021
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85. BEFRIENding for Depression, Anxiety and Social support in older adults living in Australian residential aged care facilities (BEFRIENDAS): randomised controlled trial protocol
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Doyle, Colleen, Bhar, Sunil, Bryant, Christina, Dow, Briony, Dunt, David, Mnatzaganian, George, O’Connor, Daniel, Ratcliffe, Julie, You, Emily, Bagnall, Anne-Marie, Major, Georgia, Harper, Robin, and Fearn, Marcia
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- 2021
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86. Changes in epigenetic profiles throughout early childhood and their relationship to the response to pneumococcal vaccination
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Pischedda, Sara, O’Connor, Daniel, Fairfax, Benjamin P., Salas, Antonio, Martinon-Torres, Federico, Pollard, Andrew J., and Trück, Johannes
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- 2021
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87. The catecholamine biosynthetic enzyme dopamine β-hydroxylase (DBH): first genome-wide search positions trait-determining variants acting additively in the proximal promoter
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Mustapic, Maja, Maihofer, Adam X, Mahata, Manjula, Chen, Yuqing, Baker, Dewleen G, O'Connor, Daniel T, and Nievergelt, Caroline M
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Neurosciences ,Human Genome ,Genetics ,Aetiology ,2.1 Biological and endogenous factors ,American Indian or Alaska Native ,Catecholamines ,Dopamine beta-Hydroxylase ,Genome-Wide Association Study ,Humans ,Male ,Mendelian Randomization Analysis ,Polymorphism ,Single Nucleotide ,Promoter Regions ,Genetic ,Protein Isoforms ,White People ,Biological Sciences ,Medical and Health Sciences ,Genetics & Heredity - Abstract
Dopamine beta-hydroxylase (DBH) is the biosynthetic enzyme catalyzing formation of norepinephrine. Changes in DBH expression or activity have been implicated in the pathogenesis of cardiovascular and neuropsychiatric disorders. Genetic determination of DBH enzymatic activity and its secretion are only incompletely understood. We began with a genome-wide association search for loci contributing to DBH activity in human plasma. Initially, in a population sample of European ancestry, we identified the proximal DBH promoter as a region harboring three common trait-determining variants (top hit rs1611115, P = 7.2 × 10(-51)). We confirmed their effects on transcription and showed that the three variants each acted additively on gene expression. Results were replicated in a population sample of Native American descent (top hit rs1611115, P = 4.1 × 10(-15)). Jointly, DBH variants accounted for 57% of DBH trait variation. We further identified a genome-wide significant SNP at the LOC338797 locus on chromosome 12 as trans-quantitative trait locus (QTL) (rs4255618, P = 4.62 × 10(-8)). Conditional analyses on DBH identified a third genomic region contributing to DBH variation: a likely cis-QTL adjacent to DBH in SARDH (rs7040170, P = 1.31 × 10(-14)) on chromosome 9q. We conclude that three common SNPs in the DBH promoter act additively to control phenotypic variation in DBH levels, and that two additional novel loci (SARDH and LOC338797) may also contribute to the expression of this catecholamine biosynthetic trait. Identification of DBH variants with strong effects makes it possible to take advantage of Mendelian randomization approaches to test causal effects of this intermediate trait on disease.
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- 2014
88. Loss of oncogenic Notch1 with resistance to a PI3K inhibitor in T-cell leukaemia
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Dail, Monique, Wong, Jason, Lawrence, Jessica, O’Connor, Daniel, Nakitandwe, Joy, Chen, Shann-Ching, Xu, Jin, Lee, Leslie B, Akagi, Keiko, Li, Qing, Aster, Jon C, Pear, Warren S, Downing, James R, Sampath, Deepak, and Shannon, Kevin
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Pediatric ,Cancer ,Rare Diseases ,Pediatric Cancer ,Childhood Leukemia ,Hematology ,5.1 Pharmaceuticals ,Development of treatments and therapeutic interventions ,Animals ,Benzamides ,Clone Cells ,Diphenylamine ,Down-Regulation ,Drug Resistance ,Neoplasm ,Drug Synergism ,Genes ,ras ,Indazoles ,Male ,Mice ,Mice ,Inbred C57BL ,Mitogen-Activated Protein Kinase Kinases ,Phosphoinositide-3 Kinase Inhibitors ,Precursor T-Cell Lymphoblastic Leukemia-Lymphoma ,Protein Kinase Inhibitors ,Protein Structure ,Tertiary ,Proto-Oncogene Proteins c-akt ,Receptor ,Notch1 ,Signal Transduction ,Sulfonamides ,General Science & Technology - Abstract
Mutations that deregulate Notch1 and Ras/phosphoinositide 3 kinase (PI3K)/Akt signalling are prevalent in T-cell acute lymphoblastic leukaemia (T-ALL), and often coexist. Here we show that the PI3K inhibitor GDC-0941 is active against primary T-ALLs from wild-type and Kras(G12D) mice, and addition of the MEK inhibitor PD0325901 increases its efficacy. Mice invariably relapsed after treatment with drug-resistant clones, most of which unexpectedly had reduced levels of activated Notch1 protein, downregulated many Notch1 target genes, and exhibited cross-resistance to γ-secretase inhibitors. Multiple resistant primary T-ALLs that emerged in vivo did not contain somatic Notch1 mutations present in the parental leukaemia. Importantly, resistant clones upregulated PI3K signalling. Consistent with these data, inhibiting Notch1 activated the PI3K pathway, providing a likely mechanism for selection against oncogenic Notch1 signalling. These studies validate PI3K as a therapeutic target in T-ALL and raise the unexpected possibility that dual inhibition of PI3K and Notch1 signalling could promote drug resistance in T-ALL.
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- 2014
89. Heart rate variability characteristics in a large group of active-duty marines and relationship to posttraumatic stress.
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Minassian, Arpi, Geyer, Mark A, Baker, Dewleen G, Nievergelt, Caroline M, O'Connor, Daniel T, Risbrough, Victoria B, and Marine Resiliency Study Team
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Marine Resiliency Study Team ,Autonomic Nervous System ,Humans ,Brain Injuries ,Nicotine ,Caffeine ,Photoplethysmography ,Severity of Illness Index ,Analysis of Variance ,Regression Analysis ,Cross-Sectional Studies ,Stress Disorders ,Post-Traumatic ,Depressive Disorder ,Psychiatric Status Rating Scales ,Heart Rate ,Military Personnel ,Male ,Young Adult ,Confounding Factors ,Epidemiologic ,sympathetic nervous system ,PTSD ,vagal tone ,combat ,depression ,parasympathetic ,Psychiatry ,Medical and Health Sciences ,Psychology and Cognitive Sciences - Abstract
ObjectiveHeart rate variability (HRV), thought to reflect autonomic nervous system function, is lowered under conditions such as posttraumatic stress disorder (PTSD). The potential confounding effects of traumatic brain injury (TBI) and depression in the relationship between HRV and PTSD have not been elucidated in a large cohort of military service members. Here we describe HRV associations with stress disorder symptoms in a large study of Marines while accounting for well-known covariates of HRV and PTSD including TBI and depression.MethodsFour battalions of male active-duty Marines (n = 2430) were assessed 1 to 2 months before a combat deployment. HRV was measured during a 5-minute rest. Depression and PTSD were assessed using the Beck Depression Inventory and Clinician-Administered PTSD Scale, respectively.ResultsWhen adjusting for covariates, including TBI, regression analyses showed that lower levels of high-frequency HRV were associated with a diagnosis of PTSD (β = -0.20, p = .035). Depression and PTSD severity were correlated (r = 0.49, p < .001); however, participants with PTSD but relatively low depression scores exhibited reduced high frequency compared with controls (p = .012). Marines with deployment experience (n = 1254) had lower HRV than did those with no experience (p = .033).ConclusionsThis cross-sectional analysis of a large cohort supports associations between PTSD and reduced HRV when accounting for TBI and depression symptoms. Future postdeployment assessments will be used to determine whether predeployment HRV can predict vulnerability and resilience to the serious psychological and physiological consequences of combat exposure.
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- 2014
90. Genetic Implication of a Novel Thiamine Transporter in Human Hypertension
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Zhang, Kuixing, Huentelman, Matthew J, Rao, Fangwen, Sun, Eric I, Corneveaux, Jason J, Schork, Andrew J, Wei, Zhiyun, Waalen, Jill, Miramontes-Gonzalez, Jose Pablo, Hightower, C Makena, Maihofer, Adam X, Mahata, Manjula, Pastinen, Tomi, Ehret, Georg B, Studies, International Consortium for Blood Pressure Genome-Wide Association, Schork, Nicholas J, Eskin, Eleazar, Nievergelt, Caroline M, Saier, Milton H, and O'Connor, Daniel T
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Biomedical and Clinical Sciences ,Cardiovascular Medicine and Haematology ,Women's Health ,Cardiovascular ,Hypertension ,Human Genome ,Biotechnology ,Clinical Research ,Genetics ,Heart Disease ,Aetiology ,2.1 Biological and endogenous factors ,Adult ,Alleles ,Blood Pressure ,DNA ,Female ,Genetic Predisposition to Disease ,Genome-Wide Association Study ,Genotype ,Humans ,Male ,Membrane Transport Proteins ,Phenotype ,Polymorphism ,Genetic ,Thiamine ,hypertension ,SLC35F3 ,thiamine ,transporter ,International Consortium for Blood Pressure Genome-Wide Association Studies ,Cardiorespiratory Medicine and Haematology ,Public Health and Health Services ,Cardiovascular System & Hematology ,Cardiovascular medicine and haematology - Abstract
ObjectivesThis study coupled 2 strategies-trait extremes and genome-wide pooling-to discover a novel blood pressure (BP) locus that encodes a previously uncharacterized thiamine transporter.BackgroundHypertension is a heritable trait that remains the most potent and widespread cardiovascular risk factor, although details of its genetic determination are poorly understood.MethodsRepresentative genomic deoxyribonucleic acid (DNA) pools were created from male and female subjects in the highest- and lowest-fifth percentiles of BP in a primary care population of >50,000 patients. The peak associated single-nucleotide polymorphisms were typed in individual DNA samples, as well as in twins/siblings phenotyped for cardiovascular and autonomic traits. Biochemical properties of the associated transporter were evaluated in cellular assays.ResultsAfter chip hybridization and calculation of relative allele scores, the peak associations were typed in individual samples, revealing an association between hypertension, systolic BP, and diastolic BP and the previously uncharacterized solute carrier SLC35F3. The BP genetic association at SLC35F3 was validated by meta-analysis in an independent sample from the original source population, as well as the International Consortium for Blood Pressure Genome-Wide Association Studies (across North America and western Europe). Sequence homology to a putative yeast thiamine (vitamin B1) transporter prompted us to express human SLC35F3 in Escherichia coli, which catalyzed [(3)H]-thiamine uptake. SLC35F3 risk-allele homozygotes (T/T) displayed decreased erythrocyte thiamine content on microbiological assay. In twin pairs, the SLC35F3 risk allele predicted heritable cardiovascular traits previously associated with thiamine deficiency, including elevated cardiac stroke volume with decreased vascular resistance, and elevated pressor responses to environmental (cold) stress. Allelic expression imbalance confirmed that cis variation at the human SLC35F3 locus influenced expression of that gene, and the allelic expression imbalance peak coincided with the hypertension peak.ConclusionsNovel strategies were coupled to position a new hypertension-susceptibility locus, uncovering a previously unsuspected thiamine transporter whose genetic variants predicted several disturbances in cardiac and autonomic function. The results have implications for the pathogenesis and treatment of systemic hypertension.
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- 2014
91. Assessment of plasma C-reactive protein as a biomarker of posttraumatic stress disorder risk.
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Eraly, Satish A, Nievergelt, Caroline M, Maihofer, Adam X, Barkauskas, Donald A, Biswas, Nilima, Agorastos, Agorastos, O'Connor, Daniel T, Baker, Dewleen G, and Marine Resiliency Study Team
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Marine Resiliency Study Team ,Humans ,Inflammation ,C-Reactive Protein ,Risk Assessment ,Longitudinal Studies ,Prospective Studies ,Predictive Value of Tests ,Combat Disorders ,Stress Disorders ,Post-Traumatic ,Neuropsychological Tests ,Adult ,Military Personnel ,Male ,Resilience ,Psychological ,Biomarkers ,Stress Disorders ,Post-Traumatic ,Resilience ,Psychological ,Other Medical and Health Sciences ,Psychology ,Cognitive Sciences - Abstract
ImportancePosttraumatic stress disorder (PTSD) has been associated in cross-sectional studies with peripheral inflammation. It is not known whether this observed association is the result of PTSD predisposing to inflammation (as sometimes postulated) or to inflammation predisposing to PTSD.ObjectiveTo determine whether plasma concentration of the inflammatory marker C-reactive protein (CRP) helps predict PTSD symptoms.Design, setting, and participantsThe Marine Resiliency Study, a prospective study of approximately 2600 war zone-deployed Marines, evaluated PTSD symptoms and various physiological and psychological parameters before deployment and at approximately 3 and 6 months following a 7-month deployment. Participants were recruited from 4 all-male infantry battalions imminently deploying to a war zone. Participation was requested of 2978 individuals; 2610 people (87.6%) consented and 2555 (85.8%) were included in the present analysis. Postdeployment data on combat-related trauma were included for 2208 participants (86.4% of the 2555 included) and on PTSD symptoms at 3 and 6 months after deployment for 1861 (72.8%) and 1617 (63.3%) participants, respectively.Main outcomes and measuresSeverity of PTSD symptoms 3 months after deployment assessed by the Clinician-Administered PTSD Scale (CAPS).ResultsWe determined the effects of baseline plasma CRP concentration on postdeployment CAPS using zero-inflated negative binomial regression (ZINBR), a procedure designed for distributions, such as CAPS in this study, that have an excess of zeroes in addition to being positively skewed. Adjusting for the baseline CAPS score, trauma exposure, and other relevant covariates, we found baseline plasma CRP concentration to be a highly significant overall predictor of postdeployment CAPS scores (P = .002): each 10-fold increment in CRP concentration was associated with an odds ratio of nonzero outcome (presence vs absence of any PTSD symptoms) of 1.51 (95% CI, 1.15-1.97; P = .003) and a fold increase in outcome with a nonzero value (extent of symptoms when present) of 1.06 (95% CI, 0.99-1.14; P = .09).ConclusionsAND RELEVANCE A marker of peripheral inflammation, plasma CRP may be prospectively associated with PTSD symptom emergence, suggesting that inflammation may predispose to PTSD.
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- 2014
92. Procedures for behavioral experiments in head-fixed mice.
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Guo, Zengcai V, Hires, S Andrew, Li, Nuo, O'Connor, Daniel H, Komiyama, Takaki, Ophir, Eran, Huber, Daniel, Bonardi, Claudia, Morandell, Karin, Gutnisky, Diego, Peron, Simon, Xu, Ning-long, Cox, James, and Svoboda, Karel
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Head ,Animals ,Mice ,Inbred C57BL ,Humans ,Mice ,Body Weight ,Water ,Sucrose ,Behavior ,Animal ,Water Deprivation ,Reward ,Discrimination (Psychology) ,Task Performance and Analysis ,Ethology ,Male ,Discrimination ,Psychological ,Behavior ,Animal ,Discrimination ,Psychological ,Inbred C57BL ,General Science & Technology - Abstract
The mouse is an increasingly prominent model for the analysis of mammalian neuronal circuits. Neural circuits ultimately have to be probed during behaviors that engage the circuits. Linking circuit dynamics to behavior requires precise control of sensory stimuli and measurement of body movements. Head-fixation has been used for behavioral research, particularly in non-human primates, to facilitate precise stimulus control, behavioral monitoring and neural recording. However, choice-based, perceptual decision tasks by head-fixed mice have only recently been introduced. Training mice relies on motivating mice using water restriction. Here we describe procedures for head-fixation, water restriction and behavioral training for head-fixed mice, with a focus on active, whisker-based tactile behaviors. In these experiments mice had restricted access to water (typically 1 ml/day). After ten days of water restriction, body weight stabilized at approximately 80% of initial weight. At that point mice were trained to discriminate sensory stimuli using operant conditioning. Head-fixed mice reported stimuli by licking in go/no-go tasks and also using a forced choice paradigm using a dual lickport. In some cases mice learned to discriminate sensory stimuli in a few trials within the first behavioral session. Delay epochs lasting a second or more were used to separate sensation (e.g. tactile exploration) and action (i.e. licking). Mice performed a variety of perceptual decision tasks with high performance for hundreds of trials per behavioral session. Up to four months of continuous water restriction showed no adverse health effects. Behavioral performance correlated with the degree of water restriction, supporting the importance of controlling access to water. These behavioral paradigms can be combined with cellular resolution imaging, random access photostimulation, and whole cell recordings.
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- 2014
93. Association of mobile health (mHealth) use with health status and COVID-19-related concerns by people with mobility impairments.
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Lee, Rebecca E., Suh, Bin C., O'Neal, Alicia, Cameron, Chelsea, O'Connor, Daniel P., Ohri-Vachaspati, Punam, Todd, Michael, and Hughes, Rosemary B.
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HEALTH status indicators ,SMARTPHONES ,RESEARCH funding ,QUESTIONNAIRES ,LOGISTIC regression analysis ,MOVEMENT disorders ,MULTIVARIATE analysis ,CHI-squared test ,TELEMEDICINE ,HEALTH behavior ,STATISTICS ,HEALTH promotion ,PHYSICAL mobility ,PEOPLE with disabilities ,COVID-19 pandemic - Abstract
Mobile health (mHealth) technology has increased dramatically in the wake of the pandemic. Less research has focused on people with mobility impairing (PMI) disabilities. This study determined the prevalence of mHealth use among PMI adults during the COVID-19 escalation and examines demographic, health and COVID-19 concerns correlates. PMI adults (N = 304) completed an online survey investigating mHealth use and COVID-19 concerns related to food access in June of 2020. Smartphone and mHealth use were measured with an adapted version of the survey used in the Pew Internet & American Life project. Descriptive and multivariable analyses were conducted to determine associations of demographics, health status, and COVID-19 concerns with mHealth use. About two-thirds (N = 201) of the sample were mHealth users (owned a smartphone and engaged in health-promoting behaviors with the smartphone; e.g., sought online information, tracked health behaviors, used patient portals). Having hypertension was associated with higher mHealth use, and having higher COVID-19 concerns about food access was associated with higher mHealth use. Those who used mHealth were also more engaged with smartphone apps for communication, services, and entertainment. Only the association between educational attainment and mHealth use remained significant after adjusting for other covariates in multivariable logistic regression models. PMIs continue to need support in the use of mHealth technology to help maximize access to potentially important tools for rehabilitation and health management. There is a need to continue to investigate mHealth and its applications for people with disabilities. Many people with mobility impairing disabilities may be missing opportunities for mHealth rehabilitation and healthcare. COVID-19 has widened existing gaps in access and use of mHealth technology among people with mobility impairing disabilities. Focused education is needed to help people with disabilities exploit the full range of services of their smartphones to increase access to care, social connectivity, and other important goods and services to enhance rehabilitation and health management. [ABSTRACT FROM AUTHOR]
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- 2024
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94. Efficacy of PRECICE nail in treatment of adult patients with post-traumatic femoral leg length discrepancy
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Brinker, Mark R., Amirian, Aslan, O’Connor, Daniel P., and Laughlin, Mitzi S.
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- 2021
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95. Response of Women with Mobility Impairments to a Group Weight Management Intervention in the Virtual World of SecondLife©
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Nosek, Margaret A., primary, Robinson-Whelen, Susan, additional, Hughes, Rosemary B., additional, Silveira, Stephanie L., additional, Markley, Rachel, additional, Ledoux, Tracey A., additional, O'Connor, Daniel P., additional, Lee, Rebecca E., additional, and Nosek, Thomas M., additional
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- 2020
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96. A single exercise bout augments adenovirus-specific T-cell mobilization and function
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Kunz, Hawley E., Spielmann, Guillaume, Agha, Nadia H., O'Connor, Daniel P., Bollard, Catherine M., and Simpson, Richard J.
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- 2018
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97. Radiographic comparison of finned, cementless central pegged glenoid component and conventional cemented pegged glenoid component in total shoulder arthroplasty: a prospective randomized study
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Kilian, Christopher M., Morris, Brent J., Sochacki, Kyle R., Gombera, Mufaddal M., Haigler, Richard E., O'Connor, Daniel P., and Edwards, T. Bradley
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- 2018
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98. Energy Intake Derived from an Energy Balance Equation, Validated Activity Monitors, and Dual X-Ray Absorptiometry Can Provide Acceptable Caloric Intake Data among Young Adults
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Shook, Robin P, Hand, Gregory A, O'Connor, Daniel P, Thomas, Diana M, Hurley, Thomas G, Hébert, James R, Drenowatz, Clemens, Welk, Gregory J, Carriquiry, Alicia L, and Blair, Steven N
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- 2018
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99. Physical activity and exercise during preoperative pancreatic cancer treatment
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Parker, Nathan H., Ngo-Huang, An, Lee, Rebecca E., O’Connor, Daniel P., Basen-Engquist, Karen M., Petzel, Maria Q.B., Wang, Xuemei, Xiao, Lianchun, Fogelman, David R., Schadler, Keri L., Simpson, Richard J., Fleming, Jason B., Lee, Jeffrey E., Varadhachary, Gauri R., Sahai, Sunil K., and Katz, Matthew H.G.
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- 2019
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100. Integrated Computational and Experimental Analysis of the Neuroendocrine Transcriptome in Genetic Hypertension Identifies Novel Control Points for the Cardiometabolic Syndrome
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Friese, Ryan S, Ye, Chun, Nievergelt, Caroline M, Schork, Andrew J, Mahapatra, Nitish R, Rao, Fangwen, Napolitan, Philip S, Waalen, Jill, Ehret, Georg B, Munroe, Patricia B, Schmid-Schönbein, Geert W, Eskin, Eleazar, and O’Connor, Daniel T
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Biomedical and Clinical Sciences ,Cardiovascular Medicine and Haematology ,Biotechnology ,Nutrition ,Human Genome ,Hypertension ,Obesity ,Genetics ,Cardiovascular ,2.1 Biological and endogenous factors ,Detection ,screening and diagnosis ,4.1 Discovery and preclinical testing of markers and technologies ,Aetiology ,Metabolic and endocrine ,Adrenal Glands ,Animals ,Base Sequence ,Blood Pressure ,Computational Biology ,Enhancer Elements ,Genetic ,Genetic Predisposition to Disease ,Humans ,Luciferases ,Male ,Meta-Analysis as Topic ,Metabolic Syndrome ,Mice ,Molecular Sequence Data ,Myocardium ,Neurosecretory Systems ,Nucleotide Motifs ,Oligonucleotide Array Sequence Analysis ,Promoter Regions ,Genetic ,Protein Binding ,RNA ,Messenger ,Transcription Factors ,Transcription ,Genetic ,Transcriptional Activation ,Transcriptome ,BPH mouse strain ,complex trait ,essential (genetic) hypertension ,human genetics ,metabolic syndrome ,Medical Biotechnology ,Cardiorespiratory Medicine and Haematology ,Cardiovascular System & Hematology ,Cardiovascular medicine and haematology - Abstract
BackgroundEssential hypertension, a common complex disease, displays substantial genetic influence. Contemporary methods to dissect the genetic basis of complex diseases such as the genomewide association study are powerful, yet a large gap exists between the fraction of population trait variance explained by such associations and total disease heritability.Methods and resultsWe developed a novel, integrative method (combining animal models, transcriptomics, bioinformatics, molecular biology, and trait-extreme phenotypes) to identify candidate genes for essential hypertension and the metabolic syndrome. We first undertook transcriptome profiling on adrenal glands from blood pressure extreme mouse strains: the hypertensive BPH (blood pressure high) and hypotensive BPL (blood pressure low). Microarray data clustering revealed a striking pattern of global underexpression of intermediary metabolism transcripts in BPH. The MITRA algorithm identified a conserved motif in the transcriptional regulatory regions of the underexpressed metabolic genes, and we then hypothesized that regulation through this motif contributed to the global underexpression. Luciferase reporter assays demonstrated transcriptional activity of the motif through transcription factors HOXA3, SRY, and YY1. We finally hypothesized that genetic variation at HOXA3, SRY, and YY1 might predict blood pressure and other metabolic syndrome traits in humans. Tagging variants for each locus were associated with blood pressure in a human population blood pressure extreme sample with the most extensive associations for YY1 tagging single nucleotide polymorphism rs11625658 on systolic blood pressure, diastolic blood pressure, body mass index, and fasting glucose. Meta-analysis extended the YY1 results into 2 additional large population samples with significant effects preserved on diastolic blood pressure, body mass index, and fasting glucose.ConclusionsThe results outline an innovative, systematic approach to the genetic pathogenesis of complex cardiovascular disease traits and point to transcription factor YY1 as a potential candidate gene involved in essential hypertension and the cardiometabolic syndrome.
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- 2012
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