1,465 results on '"M. Gatti"'
Search Results
52. Magnetic Resonance-based fibrosis markers in patients with Non-Alcoholic Fatty Liver Disease: Exploratory data from the Turin cohort
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D. D'Amato, D. Tore, C. Rosso, A. Armandi, G. Castelnuovo, A. Abdulle, K. Gjni, N. Perez Diaz del Campo, M. Guariglia, G.P. Caviglia, M. Gatti, and E. Bugianesi
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Hepatology ,Gastroenterology - Published
- 2023
53. Latitudes and attitudes: A multinational study of laparoscopic pyeloplasty in children
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Pilar Echeverria, Francisco Reed L, John M. Gatti, Luis H. Braga, Abraham Cherian, Luis Garcia-Aparicio, Peter Metcalfe, Javier Ruiz, Juan I. Bortagaray, Oriol Martin-Sole, Marc David Leclair, Anna Bujons, Francisco de Badiola, Robert Coleman, Nathalie R. Webb, Juan Pablo Corbetta, Juan Manuel Moldes, Imran Mushtaq, and Pedro-Jose Lopez
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Urology ,Pediatrics, Perinatology and Child Health - Abstract
The Anderson-Hynes technique has been the treatment of choice for primary ureteropelvic junction obstruction in children. Laparoscopic approach has shown similar outcomes to open, with advantages of shorter hospital stay and less pain. We reviewed the experience of 11 geographically diverse, tertiary pediatric urology institutions focusing on the outcomes and complications of laparoscopic pyeloplasty.A descriptive, retrospective study was conducted evaluating patients undergoing Anderson-Hynes dismembered laparoscopic pyeloplasty. Centers from four different continents participated. Demographic data, perioperative management, results, and complications are described.Over a 9-year period, 744 laparoscopic pyeloplasties were performed in 743 patients. Mean follow-up was 31 months (6-120m). Mean age at surgery was 82 months (1 w-19 y). Median operative time was 177 min. An internal stent was placed in 648 patients (87%). A catheter was placed for bladder drainage in 702 patients (94%). Conversion to open pyeloplasty was necessary in seven patients. Average length of hospital stay was 2.8 days. Mean time of analgesic requirement was 3.2 days. Complications, according to Clavien-Dindo classification, were observed in 56 patients (7.5%); 10 (1%) were Clavien-Dindo IIIb. Treatment failure occurred in 35 cases with 30 requiring redo pyeloplasty (4%) and 5 cases requiring nephrectomy (0.6%).We have described the laparoscopic pyeloplasty experience of institutions with diverse cultural and economic backgrounds. They had very similar outcomes, in agreement with previously published data. Based on these findings, we conclude that laparoscopic pyeloplasty is safe and successful in diverse geographics areas of the world.
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- 2023
54. Dark Energy Survey year 3 results: point spread function modelling
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Alex Drlica-Wagner, A. Hernandez, David J. James, Pablo Fosalba, Michael Schubnell, V. Scarpine, M. March, Sarah Bridle, Santiago Avila, Chihway Chang, A. Navarro-Alsina, S. Kent, S. Desai, R. D. Wilkinson, C. Davis, Samuel Hinton, Erin Sheldon, Josh Frieman, M. Costanzi, J. Meyers, G. Gutierrez, Gary Bernstein, Enrique Gaztanaga, B. Flaugher, Ofer Lahav, Ramon Miquel, Eli S. Rykoff, M. A. G. Maia, J. Carretero, G. Tarle, A. R. Walker, Ian Harrison, M. E. C. Swanson, P. F. Léget, S. Everett, S. Pandey, E. Suchyta, I. Sevilla-Noarbe, M. Smith, Peter Melchior, T. M. C. Abbott, Keith Bechtol, Juan Garcia-Bellido, J. De Vicente, N. Kuropatkin, D. L. Hollowood, M. Carrasco Kind, Michael Troxel, Daniel Gruen, M. Gatti, S. Serrano, A. Choi, W. C. Wester, A. Roodman, Matt J. Jarvis, E. J. Sanchez, David J. Brooks, T. N. Varga, K. Honscheid, Peter Doel, A. Carnero Rosell, R. L. C. Ogando, Joe Zuntz, H. T. Diehl, L. N. da Costa, Niall MacCrann, Alexandra Amon, Felipe Menanteau, D. W. Gerdes, A. A. Plazas, S. Vorperian, Kyler Kuehn, L. F. Secco, Sunayana Bhargava, Jennifer L. Marshall, K. Wei, S. Allam, Robert A. Gruendl, R. Chen, Michel Aguena, F. Paz-Chinchón, UAM. Departamento de Física Teórica, Laboratoire de Physique Nucléaire et de Hautes Énergies (LPNHE (UMR_7585)), Institut National de Physique Nucléaire et de Physique des Particules du CNRS (IN2P3)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Université de Paris (UP), DES, Jarvis, M., Bernstein, G. M., Amon, A., Davis, C., Léget, P. F., Bechtol, K., Harrison, I., Gatti, M., Roodman, A., Chang, C., Chen, R., Choi, A., Desai, S., Drlica-Wagner, A., Gruen, D., Gruendl, R. A., Hernandez, A., Maccrann, N., Meyers, J., Navarro-Alsina, A., Pandey, S., Plazas, A. A., Secco, L. F., Sheldon, E., Troxel, M. A., Vorperian, S., Wei, K., Zuntz, J., Abbott, T. M. C., Aguena, M., Allam, S., Avila, S., Bhargava, S., Bridle, S. L., Brooks, D., Carnero Rosell, A., Carrasco Kind, M., Carretero, J., Costanzi, M., da Costa, L. N., De Vicente, J., Diehl, H. T., Doel, P., Everett, S., Flaugher, B., Fosalba, P., Frieman, J., García-Bellido, J., Gaztanaga, E., Gerdes, D. W., Gutierrez, G., Hinton, S. R., Hollowood, D. L., Honscheid, K., James, D. J., Kent, S., Kuehn, K., Kuropatkin, N., Lahav, O., Maia, M. A. G., March, M., Marshall, J. L., Melchior, P., Menanteau, F., Miquel, R., Ogando, R. L. C., Paz-Chinchón, F., Rykoff, E. S., Sanchez, E., Scarpine, V., Schubnell, M., Serrano, S., Sevilla-Noarbe, I., Smith, M., Suchyta, E., Swanson, M. E. C., Tarle, G., Varga, T. N., Walker, A. R., Wester, W., and Wilkinson, R. D. (DES Collaboration)
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Point spread function ,Systematic error ,Cosmology and Nongalactic Astrophysics (astro-ph.CO) ,Sextractor ,FOS: Physical sciences ,Image Processing [Techniques] ,Field of view ,Surveys ,Cosmology: Observations ,01 natural sciences ,data analysi [software] ,Observations [Cosmology] ,Techniques: Image Processing ,0103 physical sciences ,Range (statistics) ,survey ,[PHYS.PHYS.PHYS-INS-DET]Physics [physics]/Physics [physics]/Instrumentation and Detectors [physics.ins-det] ,2mass ,Instrumentation and Methods for Astrophysics (astro-ph.IM) ,010303 astronomy & astrophysics ,Software: Data Analysis ,Weak gravitational lensing ,Physics ,Gravitational Lensing: Weak ,010308 nuclear & particles physics ,Física ,Astronomy and Astrophysics ,Mass ,Catalogues ,Software package ,Galaxy ,gravitational lensing: weak ,techniques: image processing ,catalogues ,surveys ,software: data analysis ,cosmology: observations ,Astrophysics - Instrumentation and Methods for Astrophysics ,Astrophysics - Cosmology and Nongalactic Astrophysics ,Space and Planetary Science ,Weak [Gravitational Lensing] ,Dark energy ,Data Analysis [Software] ,Catalog ,catalogue ,Astrophysics - Instrumentation and Methods for Astrophysic ,[PHYS.ASTR]Physics [physics]/Astrophysics [astro-ph] ,Algorithm ,[PHYS.PHYS.PHYS-DATA-AN]Physics [physics]/Physics [physics]/Data Analysis, Statistics and Probability [physics.data-an] ,observation [cosmology] - Abstract
We introduce a new software package for modeling the point-spread function (PSF) of astronomical images, called Piff (PSFs In the Full FOV), which we apply to the first three years (known as Y3) of the Dark Energy Survey (DES) data. We describe the relevant details about the algorithms used by Piff to model the PSF, including how the PSF model varies across the field of view (FOV). Diagnostic results show that the systematic errors from the PSF modeling are very small over the range of scales that are important for the DES Y3 weak lensing analysis. In particular, the systematic errors from the PSF modeling are significantly smaller than the corresponding results from the DES year one (Y1) analysis. We also briefly describe some planned improvements to Piff that we expect to further reduce the modeling errors in future analyses., Comment: 19 pages, accepted/published by MNRAS. See https://www.darkenergysurvey.org/des-year-3-cosmology-results-papers/ for the full DES Y3 cosmology release
- Published
- 2020
55. Testing and validation of the <scp>CIC‐cgQ</scp> and <scp>CIC‐childQ</scp> in paediatric patients and their caregivers
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Paul R. Bowlin, Joel F Koenig, Azadeh Wickham, John M. Gatti, Alonso Carrasco, and Susan F. McElroy
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Pediatrics ,medicine.medical_specialty ,Nursing (miscellaneous) ,Urinary bladder ,Spinal dysraphism ,business.industry ,Urology ,Urinary catheterisation ,medicine.anatomical_structure ,Quality of life ,Nephrology ,Medicine ,business ,Paediatric patients - Published
- 2020
56. 4CPS-110 Initial experience of the use of cefiderocol for multidrug resistant infections in a university hospital
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E Lamura, E Cocci, P Benedetti, A Pompilio, M Gatti, and R Polo
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- 2022
57. Techno-economic optimization and off-design analysis of CO2 purification units for cement plants with oxyfuel-based CO2 capture
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F. Magli and M. Gatti
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CO2 purification unit, CO2 capture, Oxyfuel, Calcium looping, Cement decarbonization - Abstract
This paper evaluates the technical and economic performance, as well as the direct/indirect CO2 emissions of the CO2 Purification Unit (CPU) for cement plants equipped with oxyfuel-based CO2 capture. Two configurations, targeting two different outlet CO2 specifications (‘moderate’ 95% purity and ‘high’ 99.9% purity) are designed, modelled and optimized in order to minimize the incremental clinker production cost for different values of the carbon tax. Mass and energy balances are simulated with Aspen Plus, while the operating conditions are numerically optimized with Matlab. Results show that moderate purity can be achieved with an increased cost of clinker of 16.3 €/tclk (CO2 recovery 99.3%), while the base high purity configuration leads to a 19.3 €/tclk increase (CO2 recovery 96.1%). Sensitivity analyses are carried out on design parameters (fuel and air infiltrations in the oxyfuel calciner line) and exogenous factors (carbon tax, CO2 intensity of electricity). Air infiltration rate has the highest impact on the incremental cost of clinker (increased by 25% when air leakage grows from 0 to 10%) and on the selection of optimal operational conditions. Off-design analyses aimed at assessing the impact of air infiltration changing over time highlight the relevance of designing the CPU for the scenario with air infiltrations, while selecting reasonable temperature differences (e.g. 5K) to avoid operability issues in the cold box heat exchanger. For the base case CPU, the cost of clinker increases by 3 €/tclk when moving from zero to 10% air infiltration
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- 2022
58. Novel chemical-physical autopsy investigation in sudden infant death and sudden intrauterine unexplained death syndromes
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Antonietta M Gatti, Marko Ristic, Stefano Stanzani, and Anna M Lavezzi
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Biomedical Engineering ,Medicine (miscellaneous) ,Brain ,Humans ,General Materials Science ,Bioengineering ,Autopsy ,Syndrome ,Development ,Fetal Death ,Sudden Infant Death - Abstract
Aim: Verify the presence of inorganic nanoparticle entities in brain tissue samples from sudden infant death syndrome (SIDS)/sudden intrauterine unexplained death syndrome (SIUDS) cases. The presence of inorganic debris could be a cofactor that compromises proper brain tissue functionality. Materials & methods: A novel autopsy approach that consists of neuropathological analysis procedures combined with energy dispersive spectroscopy/field emission gun environmental scanning electron microscopy investigations was implemented on 10 SIDS/SIUDS cases, whereas control samples were obtained from 10 cases of fetal/infant death from known cause. Results: Developmental abnormalities of the brain were associated with the presence of foreign bodies. Although nanoparticles were present as well in control samples, they were not associated with histological brain anomalies, as was the case in SIDS/SIUDS. Conclusion: Inorganic particles present in brain tissues demonstrate their ability to cross the hemato–encephalic barrier and to interact with tissues and cells in an unknown yet pathological fashion. This gives a rationale to consider them as cofactors of lethality.
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- 2022
59. Cross-correlation of DES Y3 lensing and ACT/Planck thermal Sunyaev Zel'dovich Effect II: Modeling and constraints on halo pressure profiles
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S. Pandey, M. Gatti, E. Baxter, J. C. Hill, X. Fang, C. Doux, G. Giannini, M. Raveri, J. DeRose, H. Huang, E. Moser, N. Battaglia, A. Alarcon, A. Amon, M. Becker, A. Campos, C. Chang, R. Chen, A. Choi, K. Eckert, J. Elvin-Poole, S. Everett, A. Ferte, I. Harrison, N. Maccrann, J. Mccullough, J. Myles, A. Navarro Alsina, J. Prat, R.P. Rollins, C. Sanchez, T. Shin, M. Troxel, I. Tutusaus, B. Yin, M.
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- 2022
- Full Text
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60. Dark Energy Survey Y3 results: blending shear and redshift biases in image simulations
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Matthew R. Becker, J. Carretero, F. Paz-Chinchón, F. Tarsitano, Brian Yanny, Josh Frieman, David J. Brooks, M. March, Erin Sheldon, Martin Crocce, R. D. Wilkinson, Antonella Palmese, Carlos Solans Sanchez, M. Smith, M Rodriguez-Monroy, Peter Doel, R. L. C. Ogando, M. A. G. Maia, W. G. Hartley, Adriano Pieres, Daniel Gruen, J. Myles, D. L. Burke, V. Scarpine, B. Flaugher, H. T. Diehl, J. P. Dietrich, Juan Garcia-Bellido, D. W. Gerdes, David J. James, David Bacon, Alexandra Amon, G. Tarle, I. Harrison, Pablo Fosalba, Niall MacCrann, Agnès Ferté, J. Annis, E. Suchyta, I. Sevilla-Noarbe, S. Allam, Robert A. Gruendl, M. Soares-Santos, Peter Melchior, Maria E. S. Pereira, J. McCullough, K. D. Eckert, Daniel Thomas, K. Herner, T. N. Varga, Felipe Menanteau, M. Costanzi, E. Bertin, M. Gatti, M. Carrasco Kind, T. M. C. Abbott, Ramon Miquel, Michael Troxel, Paul Martini, Jennifer L. Marshall, J. Muir, Enrique Gaztanaga, J. Gschwend, A. Choi, D. L. Hollowood, A. Alarcon, Gary Bernstein, M. E. C. Swanson, Ofer Lahav, E. M. Huff, Chun-Hao To, K. Honscheid, A. Roodman, Tommaso Giannantonio, Samuel Hinton, E. J. Sanchez, Michel Aguena, S. Serrano, Robert Morgan, G. Gutierrez, Joe Zuntz, R. P. Rollins, A. Carnero Rosell, I. Ferrero, Matt J. Jarvis, Marcos Lima, Sarah Bridle, Scott Dodelson, Tim Eifler, S. Desai, Joseph J. Mohr, S. Everett, S. Samuroff, A. A. Plazas, L. F. Secco, J. de Vicente, Maccrann, N, Becker, M R, Mccullough, J, Amon, A, Gruen, D, Jarvis, M, Choi, A, Troxel, M A, Sheldon, E, Yanny, B, Herner, K, Dodelson, S, Zuntz, J, Eckert, K, Rollins, R P, Varga, T N, Bernstein, G M, Gruendl, R A, Harrison, I, Hartley, W G, Sevilla-Noarbe, I, Pieres, A, Bridle, S L, Myles, J, Alarcon, A, Everett, S, Sánchez, C, Huff, E M, Tarsitano, F, Gatti, M, Secco, L F, Abbott, T M C, Aguena, M, Allam, S, Annis, J, Bacon, D, Bertin, E, Brooks, D, Burke, D L, Carnero , Rosell, A, Carrasco , Kind, M, Carretero, J, Costanzi, M, Crocce, M, Pereira, M E S, De , Vicente, J, Desai, S, Diehl, H , T, Dietrich, J P, Doel, P, Eifler, T F, Ferrero, I, Ferté, A, Flaugher, B, Fosalba, P, Frieman, J, García-Bellido, J, Gaztanaga, E, Gerdes, D W, Giannantonio, T, Gschwend, J, Gutierrez, G, Hinton, S R, Hollowood, D L, Honscheid, K, James, D J, Lahav, O, Lima, M, Maia, M A G, March, M, Marshall, J L, Martini, P, Melchior, P, Menanteau, F, Miquel, R, Mohr, J J, Morgan, R, Muir, J, Ogando, R L C, Palmese, A, Paz-Chinchón, F, Plazas, A A, Rodriguez-Monroy, M, Roodman, A, Samuroff, S, Sanchez, E, Scarpine, V, Serrano, S, Smith, M, Soares-Santos, M, Suchyta, E, Swanson, M E C, Tarle, G, Thomas, D, To, C, Wilkinson, R D, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), European Commission, Generalitat de Catalunya, Ministerio de Economía y Competitividad (España), European Research Council, Department of Energy (US), National Aeronautics and Space Administration (US), and Fondo Nacional de Desarrollo Científico y Tecnológico (Chile)
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Physics ,Large-scale structure of Universe ,010308 nuclear & particles physics ,Astronomy and Astrophysics ,Astrophysics ,Astrophysics::Cosmology and Extragalactic Astrophysics ,01 natural sciences ,Redshift ,Image (mathematics) ,gravitational lensing: weak ,large-scale structure of Universe ,Astrophysics - Cosmology and Nongalactic Astrophysics ,Shear (sheet metal) ,Space and Planetary Science ,Gravitational lensing: weak ,weak [gravitational lensing] ,0103 physical sciences ,Dark energy ,010303 astronomy & astrophysics - Abstract
DES Collaboration: N. MacCrann et al., As the statistical power of galaxy weak lensing reaches per cent level precision, large, realistic, and robust simulations are required to calibrate observational systematics, especially given the increased importance of object blending as survey depths increase. To capture the coupled effects of blending in both shear and photometric redshift calibration, we define the effective redshift distribution for lensing, nγ(z), and describe how to estimate it using image simulations. We use an extensive suite of tailored image simulations to characterize the performance of the shear estimation pipeline applied to the Dark Energy Survey (DES) Year 3 data set. We describe the multiband, multi-epoch simulations, and demonstrate their high level of realism through comparisons to the real DES data. We isolate the effects that generate shear calibration biases by running variations on our fiducial simulation, and find that blending-related effects are the dominant contribution to the mean multiplicative bias of approximately −2 per cent . By generating simulations with input shear signals that vary with redshift, we calibrate biases in our estimation of the effective redshift distribution, and demonstrate the importance of this approach when blending is present. We provide corrected effective redshift distributions that incorporate statistical and systematic uncertainties, ready for use in DES Year 3 weak lensing analyses., Funding for the DES Projects has been provided by the U.S. Department of Energy, the U.S. National Science Foundation, the Ministry of Science and Education of Spain, the Science and Technology Facilities Council of the United Kingdom, the Higher Education Funding Council for England, the National Center for Supercomputing Applications at the University of Illinois at Urbana-Champaign, the Kavli Institute of Cosmological Physics at the University of Chicago, the Center for Cosmology and Astro-Particle Physics at the Ohio State University, the Mitchell Institute for Fundamental Physics and Astronomy at Texas A&M University, Financiadora de Estudos e Projetos, Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de Janeiro, Conselho Nacional de Desenvolvimento Científico e Tecnológico and the Ministério da Ciência, Tecnologia e Inovação, the Deutsche Forschungsgemeinschaft and the Collaborating Institutions in the Dark Energy Survey. The Collaborating Institutions are Argonne National Laboratory, the University of California at Santa Cruz, the University of Cambridge, Centro de Investigaciones Energéticas, Medioambientales y Tecnológicas-Madrid, the University of Chicago, University College London, the DES-Brazil Consortium, the University of Edinburgh, the Eidgenössische Technische Hochschule (ETH) Zürich, Fermi National Accelerator Laboratory, the University of Illinois at Urbana-Champaign, the Institut de Ciències de l’Espai (IEEC/CSIC), the Institut de Física d’Altes Energies, Lawrence Berkeley National Laboratory, the Ludwig-Maximilians Universität München and the associated Excellence Cluster Universe, the University of Michigan, NFS’s NOIRLab, the University of Nottingham, The Ohio State University, the University of Pennsylvania, the University of Portsmouth, SLAC National Accelerator Laboratory, Stanford University, the University of Sussex, Texas A&M University, and the OzDES Membership Consortium. Based in part on observations at Cerro Tololo Inter-American Observatory at NSF’s NOIRLab (NOIRLab Prop. ID 2012B-0001; PI: J. Frieman), which is managed by the Association of Universities for Research in Astronomy (AURA) under a cooperative agreement with the National Science Foundation. The DES data management system is supported by the National Science Foundation under Grant Numbers AST-1138766 and AST-1536171. The DES participants from Spanish institutions are partially supported by MICINN under grants ESP2017-89838, PGC2018-094773, PGC2018-102021, SEV-2016-0588, SEV-2016-0597, and MDM-2015-0509, some of which include ERDF funds from the European Union. IFAE is partially funded by the CERCA program of the Generalitat de Catalunya. Research leading to these results has received funding from the European Research Council under the European Union’s Seventh Framework Program (FP7/2007-2013) including ERC grant agreements 240672, 291329, and 306478. We acknowledge support from the Brazilian Instituto Nacional de Ciência e Tecnologia (INCT) do e-Universo (CNPq grant 465376/2014-2). This manuscript has been authored by Fermi Research Alliance, LLC under Contract No. DE-AC02-07CH11359 with the U.S. Department of Energy, Office of Science, Office of High Energy Physics. NM acknowledges support from a European Research Council (ERC) Starting Grant under the European Union’s Horizon 2020 research and innovation programme (grant agreement no. 851274). MRB is supported by DOE grant DE-AC02-06CH11357. This work was supported by the Department of Energy, Laboratory Directed Research and Development program at SLAC National Accelerator Laboratory, under contract DE-AC02-76SF00515 and as part of the Panofsky Fellowship awarded to DG. MJ is partially supported by the U.S. Department of Energy grant DE-SC0007901 and funds from the University of Pennsylvania. AC acknowledges support from NASA grant 15-WFIRST15-0008. RR, IH, and SB acknowledge support from the European Research Council in the form of a Consolidator Grant with number 681431. IH also acknowledges support from the Beecroft Trust. We gratefully acknowledge the computing resources provided on Bebop, a high-performance computing cluster operated by the Laboratory Computing Resource Center at Argonne National Laboratory, and the RHIC Atlas Computing Facility, operated by Brookhaven National Laboratory. This research used resources of the National Energy Research Scientific Computing Center (NERSC), a U.S. Department of Energy Office of Science User Facility operated under Contract No. DE-AC02-05CH11231.
- Published
- 2022
61. Inter-row floor management is a powerful factor for optimising vine balance in a non-irrigated organic Barbera vineyard in northern Italy
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M. Gatti, A. Garavani, C. Squeri, C. Capri, I. Diti, R. D’Ambrosio, T. Frioni, C. Scotti, and S. Poni
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Leaf gas exchange ,Yield ,Cover crops ,Vine balance ,Soil Science ,Settore AGR/03 - ARBORICOLTURA GENERALE E COLTIVAZIONI ARBOREE ,Plant Science ,Agronomy and Crop Science ,Grape composition ,Tillage - Published
- 2022
62. Cross-correlation of DES Y3 lensing and ACT/Planck thermal Sunyaev Zel’dovich Effect I:Measurements, systematics tests, and feedback model constraints
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M. Gatti, S. Pandey, E. Baxter, J. C. Hill, E. Moser, M. Raveri, X. Fang, J. DeRose, G. Giannini, C. Doux, H. Huang, N. Battaglia, A. Alarcon, A. Amon, M. Becker, A. Campos, C. Chang, R. Chen, A. Choi, K. Eckert, J. Elvin-Poole, S. Everett, A. Ferte, I. Harrison, N. Maccrann, J. Mccullough, J. Myles, A. Navarro Alsina, J. Prat, R.P. Rollins, C. Sanchez, T. Shin, M. Troxel, I. Tutusaus, B. Yin, T.
- Published
- 2022
- Full Text
- View/download PDF
63. Cosmic shear in harmonic space from the Dark Energy Survey Year 1 Data: compatibility with configuration space results
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H Camacho, F Andrade-Oliveira, A Troja, R Rosenfeld, L Faga, R Gomes, C Doux, X Fang, M Lima, V Miranda, T F Eifler, O Friedrich, M Gatti, G M Bernstein, J Blazek, S L Bridle, A Choi, C Davis, J DeRose, E Gaztanaga, D Gruen, W G Hartley, B Hoyle, M Jarvis, N MacCrann, J Prat, M M Rau, S Samuroff, C Sánchez, E Sheldon, M A Troxel, P Vielzeuf, J Zuntz, T M C Abbott, M Aguena, S Allam, J Annis, D Bacon, E Bertin, D Brooks, D L Burke, A Carnero Rosell, M Carrasco Kind, J Carretero, F J Castander, R Cawthon, M Costanzi, L N da Costa, M E S Pereira, J De Vicente, S Desai, H T Diehl, P Doel, S Everett, A E Evrard, I Ferrero, B Flaugher, P Fosalba, D Friedel, J Frieman, J García-Bellido, D W Gerdes, R A Gruendl, J Gschwend, G Gutierrez, S R Hinton, D L Hollowood, K Honscheid, D Huterer, D J James, K Kuehn, N Kuropatkin, O Lahav, M A G Maia, J L Marshall, P Melchior, F Menanteau, R Miquel, R Morgan, F Paz-Chinchón, D Petravick, A Pieres, A A Plazas Malagón, K Reil, M Rodriguez-Monroy, E Sanchez, V Scarpine, M Schubnell, S Serrano, I Sevilla-Noarbe, M Smith, M Soares-Santos, E Suchyta, G Tarle, D Thomas, C To, T N Varga, J Weller, R D Wilkinson, (D E S Collaboration), Camacho, H., Andrade-Oliveira, F., Troja, A., Rosenfeld, R., Faga, L., Gomes, R., Doux, C., Fang, X., Lima, M., Miranda, V., Eifler, T. F., Friedrich, O., Gatti, M., Bernstein, G. M., Blazek, J., Bridle, S. L., Choi, A., Davis, C., Derose, J., Gaztanaga, E., Gruen, D., Hartley, W. G., Hoyle, B., Jarvis, M., Maccrann, N., Prat, J., Rau, M. M., Samuroff, S., Sánchez, C., Sheldon, E., Troxel, M. A., Vielzeuf, P., Zuntz, J., Abbott, T. M. C., Aguena, M., Allam, S., Annis, J., Bacon, D., Bertin, E., Brooks, D., Burke, D. L., Carnero Rosell, A., Carrasco Kind, M., Carretero, J., Castander, F. J., Cawthon, R., Costanzi, M., da Costa, L. N., Pereira, M. E. S., De Vicente, J., Desai, S., Diehl, H. T., Doel, P., Everett, S., Evrard, A. E., Ferrero, I., Flaugher, B., Fosalba, P., Friedel, D., Frieman, J., García-Bellido, J., Gerdes, D. W., Gruendl, R. A., Gschwend, J., Gutierrez, G., Hinton, S. R., Hollowood, D. L., Honscheid, K., Huterer, D., James, D. J., Kuehn, K., Kuropatkin, N., Lahav, O., Maia, M. A. G., Marshall, J. L., Melchior, P., Menanteau, F., Miquel, R., Morgan, R., Paz-Chinchón, F., Petravick, D., Pieres, A., Malagón, A. A. Plaza, Reil, K., Rodriguez-Monroy, M., Sanchez, E., Scarpine, V., Schubnell, M., Serrano, S., Sevilla-Noarbe, I., Smith, M., Soares-Santos, M., Suchyta, E., Tarle, G., Thomas, D., To, C., Varga, T. N., Weller, J., Wilkinson, R. D., and Des, Collaboration
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observation ,model ,Cosmology and Nongalactic Astrophysics (astro-ph.CO) ,consistency ,FOS: Physical sciences ,Astronomy and Astrophysics ,Astrophysics::Cosmology and Extragalactic Astrophysics ,power spectrum ,gravitational lensing: weak ,weak [gravitational lensing] ,Space and Planetary Science ,cosmology: observations ,impact ,astro-ph.CO ,precision ,LENTES GRAVITACIONAIS ,(cosmology:) large-scale structure of Universe ,large-scale structure of Universe ,cosmology ,physics ,Astrophysics - Cosmology and Nongalactic Astrophysics - Abstract
We perform a cosmic shear analysis in harmonic space using the first year of data collected by the Dark Energy Survey (DES-Y1). We measure the cosmic weak lensing shear power spectra using the Metacalibration catalogue and perform a likelihood analysis within the framework of CosmoSIS. We set scale cuts based on baryonic effects contamination and model redshift and shear calibration uncertainties as well as intrinsic alignments. We adopt as fiducial covariance matrix an analytical computation accounting for the mask geometry in the Gaussian term, including non-Gaussian contributions. A suite of 1200 lognormal simulations is used to validate the harmonic space pipeline and the covariance matrix. We perform a series of stress tests to gauge the robustness of the harmonic space analysis. Finally, we use the DES-Y1 pipeline in configuration space to perform a similar likelihood analysis and compare both results, demonstrating their compatibility in estimating the cosmological parameters $S_8$, $\sigma_8$ and $\Omega_m$. The methods implemented and validated in this paper will allow us to perform a consistent harmonic space analysis in the upcoming DES data., Comment: 16 pages, 11 figures. This version matches the published one
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- 2022
64. Galaxy–galaxy lensing with the DES-CMASS catalogue: measurement and constraints on the galaxy-matter cross-correlation
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J. De Vicente, A. A. Plazas Malagón, M. March, W. G. Hartley, J. P. Dietrich, David J. Brooks, Juan Garcia-Bellido, Christopher M. Hirata, Dragan Huterer, Joseph J. Mohr, Jochen Weller, J. Carretero, F. J. Castander, G. Tarle, Carlos Solans Sanchez, E. Bertin, Adriano Pieres, Jack Elvin-Poole, B. Flaugher, M. Carrasco Kind, A. Roodman, F. Andrade-Oliveira, Tommaso Giannantonio, Samuel Hinton, V. Scarpine, Peter Doel, Chun-Hao To, David J. James, G. Gutierrez, Jennifer L. Marshall, E. J. Sanchez, M Gatti, J. DeRose, Ramon Miquel, Josh Frieman, Pablo Fosalba, Joe Zuntz, Maria E. S. Pereira, S. Lee, E. Suchyta, August E. Evrard, Enrique Gaztanaga, Erin Sheldon, Daniel Thomas, H. T. Diehl, Ofer Lahav, Y. Omori, M. Costanzi, A. Carnero Rosell, R. Cawthon, Robert Morgan, Ashley J. Ross, I. Ferrero, P. Vielzeuf, Michael Schubnell, Tim Eifler, Chihway Chang, Niall MacCrann, S. Desai, E. M. Huff, C. Davis, Michel Aguena, D. L. Burke, J. Gschwend, Gary Bernstein, S. Allam, Robert A. Gruendl, S. Samuroff, Ami Choi, Ben Hoyle, Antonella Palmese, M. A. G. Maia, I. Sevilla-Noarbe, N. Kuropatkin, T. N. Varga, L. N. da Costa, J. Prat, M. E. C. Swanson, Alexandra Amon, Felipe Menanteau, K. Honscheid, Michael Troxel, Marcos Lima, S. Everett, Kyler Kuehn, M. Smith, D. L. Hollowood, S. Serrano, Daniel Gruen, D. W. Gerdes, Christopher J. Conselice, Markus Rau, F. Paz-Chinchón, Lee, S., Troxel, M. A., Choi, A., Elvin-Poole, J., Hirata, C., Honscheid, K., Huff, E. M., Maccrann, N., Ross, A. J., Eifler, T. F., Chang, C., Miquel, R., Omori, Y., Prat, J., Bernstein, G. M., Davis, C., Derose, J., Gatti, M., Rau, M. M., Samuroff, S., Sanchez, C., Vielzeuf, P., Zuntz, J., Aguena, M., Allam, S., Amon, A., Andrade-Oliveira, F., Bertin, E., Brooks, D., Burke, D. L., Rosell, A. C., Kind, M. C., Carretero, J., Castander, F. J., Cawthon, R., Conselice, C., Costanzi, M., da Costa, L. N., Pereira, M. E. S., de Vicente, J., Desai, S., Diehl, H. T., Dietrich, J. P., Doel, P., Everett, S., Evrard, A. E., Ferrero, I., Flaugher, B., Fosalba, P., Frieman, J., Garcia-Bellido, J., Gaztanaga, E., Gerdes, D. W., Giannantonio, T., Gruen, D., Gruendl, R. A., Gschwend, J., Gutierrez, G., Hartley, W. G., Hinton, S. R., Hollowood, D. L., Hoyle, B., Huterer, D., James, D. J., Kuehn, K., Kuropatkin, N., Lahav, O., Lima, M., Maia, M. A. G., March, M., Marshall, J. L., Menanteau, F., Mohr, J. J., Morgan, R., Palmese, A., Paz-Chinchon, F., Pieres, A., Malagon, A. A. P., Roodman, A., Sanchez, E., Scarpine, V., Schubnell, M., Serrano, S., Sevilla-Noarbe, I., Sheldon, E., Smith, M., Suchyta, E., Swanson, M. E. C., Tarle, G., Thomas, D., To, C., Varga, T. N., Weller, J., Duke University, Ohio State University, California Institute of Technology, University of Cambridge, University of Arizona, University of Chicago, Institució Catalana de Recerca i Estudis Avançats, Barcelona Institute of Science and Technology, Stanford University, University of Pennsylvania, 501 Campbell Hall, Santa Cruz Institute for Particle Physics, Carnegie Mellon University, University of Edinburgh, Universidade de São Paulo (USP), Laboratório Interinstitucional de e-Astronomia - LIneA, Fermi National Accelerator Laboratory, Universidade Estadual Paulista (UNESP), Institut d’Astrophysique de Paris, University College London, SLAC National Accelerator Laboratory, Instituto de Astrofisica de Canarias, Dpto. Astrofisica, National Center for Supercomputing Applications, University of Illinois at Urbana-Champaign, Institut d’Estudis Espacials de Catalunya (IEEC), CSIC), University of Wisconsin-Madison, University of Manchester, School of Physics and Astronomy, University of Trieste, INAF-Osservatorio Astronomico di Trieste, Institute for Fundamental Physics of the Universe, Observatório Nacional, University of Michigan, Medioambientales y Tecnológicas (CIEMAT), IIT Hyderabad, Ludwig-Maximilians-Universität, University of Oslo, Universidad Autonoma de Madrid, University of Geneva, University of Queensland, Max Planck Institute for Extraterrestrial Physics, Harvard & Smithsonian, Macquarie University, Lowell Observatory, Texas A&M University, Peyton Hall, Brookhaven National Laboratory, University of Southampton, Oak Ridge National Laboratory, University of Portsmouth, Ludwig-Maximilians Universität München, Institut d'Astrophysique de Paris (IAP), Institut national des sciences de l'Univers (INSU - CNRS)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), DES, UAM. Departamento de Física Teórica, Department of Energy (US), National Science Foundation (US), National Aeronautics and Space Administration (US), Simons Foundation, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Ministerio de Economía y Competitividad (España), European Commission, Generalitat de Catalunya, European Space Agency, and European Research Council
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Physics ,Cosmology and Nongalactic Astrophysics (astro-ph.CO) ,Cross-correlation ,Gravitational lensing ,Large-scale structure of universe ,Física ,FOS: Physical sciences ,Astronomy and Astrophysics ,Astrophysics ,Astrophysics::Cosmology and Extragalactic Astrophysics ,01 natural sciences ,Galaxy ,Space and Planetary Science ,0103 physical sciences ,Large-scale structure of the Universe ,010306 general physics ,[PHYS.ASTR]Physics [physics]/Astrophysics [astro-ph] ,010303 astronomy & astrophysics ,Astrophysics::Galaxy Astrophysics ,Astrophysics - Cosmology and Nongalactic Astrophysics - Abstract
DES collaboration: et al., The DMASS sample is a photometric sample from the DES Year 1 data set designed to replicate the properties of the CMASS sample from BOSS, in support of a joint analysis of DES and BOSS beyond the small overlapping area. In this paper, we present the measurement of galaxy–galaxy lensing using the DMASS sample as gravitational lenses in the DES Y1 imaging data. We test a number of potential systematics that can bias the galaxy–galaxy lensing signal, including those from shear estimation, photometric redshifts, and observing conditions. After careful systematic tests, we obtain a highly significant detection of the galaxy–galaxy lensing signal, with total S/N = 25.7. With the measured signal, we assess the feasibility of using DMASS as gravitational lenses equivalent to CMASS, by estimating the galaxy-matter cross-correlation coefficient rcc. By jointly fitting the galaxy–galaxy lensing measurement with the galaxy clustering measurement from CMASS, we obtain rcc=1.09+0.12−0.11 for the scale cut of 4h−1Mpc and rcc=1.06+0.13−0.12 for 12h−1Mpc in fixed cosmology. By adding the angular galaxy clustering of DMASS, we obtain rcc = 1.06 ± 0.10 for the scale cut of 4h−1Mpc and rcc = 1.03 ± 0.11 for 12h−1Mpc. The resulting values of rcc indicate that the lensing signal of DMASS is statistically consistent with the one that would have been measured if CMASS had populated the DES region within the given statistical uncertainty. The measurement of galaxy–galaxy lensing presented in this paper will serve as part of the data vector for the forthcoming cosmology analysis in preparation., AC acknowledges support from NASA grant 15-WFIRST15-0008. During the preparation of this paper, C.H. was supported by the Simons Foundation, NASA, and the U.S. Department of Energy. Funding for the DES Projects has been provided by the U.S. Department of Energy, the U.S. National Science Foundation, the Ministry of Science and Education of Spain, the Science and Technology Facilities Council of the United Kingdom, the Higher Education Funding Council for England, the National Center for Supercomputing Applications at the University of Illinois at Urbana-Champaign, the Kavli Institute of Cosmological Physics at the University of Chicago, the Center for Cosmology and Astro-Particle Physics at the Ohio State University, the Mitchell Institute for Fundamental Physics and Astronomy at Texas A&M University, Financiadora de Estudos e Projetos, Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de Janeiro, Conselho Nacional de Desenvolvimento Científico e Tecnológico and the Ministério da Ciência, Tecnologia e Inovação, the Deutsche Forschungsgemeinschaft and the Collaborating Institutions in the Dark Energy Survey. The Collaborating Institutions are Argonne National Laboratory, the University of California at Santa Cruz, the University of Cambridge, Centro de Investigaciones Energéticas, Medioambientales y Tecnológicas-Madrid, the University of Chicago, University College London, the DES-Brazil Consortium, the University of Edinburgh, the Eidgenössische Technische Hochschule (ETH) Zürich, Fermi National Accelerator Laboratory, the University of Illinois at Urbana-Champaign, the Institut de Ciències de l’Espai (IEEC/CSIC), the Institut de Física d’Altes Energies, Lawrence Berkeley National Laboratory, the Ludwig-Maximilians Universität München and the associated Excellence Cluster Universe, the University of Michigan, NFS’s NOIRLab, the University of Nottingham, The Ohio State University, the University of Pennsylvania, the University of Portsmouth, SLAC National Accelerator Laboratory, Stanford University, the University of Sussex, Texas A&M University, and the OzDES Membership Consortium. Based in part on observations at Cerro Tololo Inter-American Observatory at NSF’s NOIRLab (NOIRLab Prop. ID 2012B-0001; PI: J. Frieman), which is managed by the Association of Universities for Research in Astronomy (AURA) under a cooperative agreement with the National Science Foundation. The DES data management system is supported by the National Science Foundation under Grant Numbers AST-1138766 and AST-1536171. The DES participants from Spanish institutions are partially supported by MICINN under grants ESP2017-89838, PGC2018-094773, PGC2018-102021, SEV-2016-0588, SEV-2016-0597, and MDM-2015-0509, some of which include ERDF funds from the European Union. IFAE is partially funded by the CERCA programme of the Generalitat de Catalunya. Research leading to these results has received funding from the European Research Council under the European Union’s Seventh Framework Program (FP7/2007-2013) including ERC grant agreements 240672, 291329, and 306478. We acknowledge support from the Brazilian Instituto Nacional de Ciência e Tecnologia (INCT) do e-Universo (CNPq grant 465376/2014-2). This manuscript has been authored by Fermi Research Alliance, LLC under Contract No. DE-AC02-07CH11359 with the U.S. Department of Energy, Office of Science, Office of High Energy Physics. Funding for SDSS-III has been provided by the Alfred P. Sloan Foundation, the Participating Institutions, the National Science Foundation, and the U.S. Department of Energy Office of Science. The SDSS-III web site is http://www.sdss3.org/. SDSS-III is managed by the Astrophysical Research Consortium for the Participating Institutions of the SDSS-III Collaboration including the University of Arizona, the Brazilian Participation Group, Brookhaven National Laboratory, Carnegie Mellon University, University of Florida, the French Participation Group, the German Participation Group, Harvard University, the Instituto de Astrofisica de Canarias, the Michigan State/Notre Dame/JINA Participation Group, Johns Hopkins University, Lawrence Berkeley National Laboratory, Max Planck Institute for Astrophysics, Max Planck Institute for Extraterrestrial Physics, New Mexico State University, New York University, Ohio State University, Pennsylvania State University, University of Portsmouth, Princeton University, the Spanish Participation Group, University of Tokyo, University of Utah, Vanderbilt University, University of Virginia, University of Washington, and Yale University. This work used resources at the Owens Cluster at the Ohio Supercomputer Center (OSC 1987) and the Duke Compute Cluster (DCC) at Duke University.
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- 2022
65. FastMap: Fast eQTL mapping in homozygous populations.
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Daniel M. Gatti, Andrey A. Shabalin, Tieu-Chong Lam, Fred A. Wright, Ivan Rusyn, and Andrew B. Nobel
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- 2009
- Full Text
- View/download PDF
66. A large-scale genome-lipid association map guides lipid identification
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Jason D. Russell, Joshua J. Coon, Paul D. Hutchins, Donald S. Stapleton, Alan D. Attie, Mary E. Rabaglia, Katherine A. Overmyer, Thiru R. Reddy, Gregory R. Keele, Gary A. Churchill, Kathryn L. Schueler, Mark P. Keller, Duy Pham, Vanessa Linke, Karl W. Broman, Daniel M. Gatti, Edna A. Trujillo, Emily M. Cushing, Dain R. Brademan, and Ian J. Miller
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Genotype ,Hydrolases ,Endocrinology, Diabetes and Metabolism ,Genome-wide association study ,Locus (genetics) ,Computational biology ,Biology ,Quantitative trait locus ,Genome ,Article ,Mice ,Physiology (medical) ,Gangliosides ,Lipidomics ,Internal Medicine ,Animals ,Humans ,Sex Characteristics ,Extramural ,Chromosome Mapping ,Cell Biology ,Lipid Metabolism ,Lipids ,Mice, Inbred C57BL ,Phospholipases A2 ,Phosphatidylcholines ,Human genome ,Genome-Wide Association Study ,Plasmids - Abstract
Despite the crucial roles of lipids in metabolism, we are still at the early stages of comprehensively annotating lipid species and their genetic basis. Mass spectrometry-based discovery lipidomics offers the potential to globally survey lipids and their relative abundances in various biological samples. To discover the genetics of lipid features obtained through high-resolution liquid chromatography-tandem mass spectrometry, we analysed liver and plasma from 384 diversity outbred mice, and quantified 3,283 molecular features. These features were mapped to 5,622 lipid quantitative trait loci and compiled into a public web resource termed LipidGenie. The data are cross-referenced to the human genome and offer a bridge between genetic associations in humans and mice. Harnessing this resource, we used genome-lipid association data as an additional aid to identify a number of lipids, for example gangliosides through their association with B4galnt1, and found evidence for a group of sex-specific phosphatidylcholines through their shared locus. Finally, LipidGenie's ability to query either mass or gene-centric terms suggests acyl-chain-specific functions for proteins of the ABHD family.
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- 2020
67. Dark Energy Survey Year 3 results: cosmology with moments of weak lensing mass maps – validation on simulations
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M. Smith, Daniel Gruen, D. W. Gerdes, F. Paz-Chinchón, D. J. James, J. Carretero, G. Tarle, Ian Harrison, J. Gschwend, Shantanu Desai, Marcos Lima, Kyler Kuehn, M. Carrasco Kind, Ramon Miquel, E. Suchyta, Juan Garcia-Bellido, August E. Evrard, Felipe Menanteau, Daniel Thomas, E. Buckley-Geer, Jennifer L. Marshall, L. Whiteway, Peter Doel, Juan Estrada, M. March, J. DeRose, L. F. Secco, Josh Frieman, V. Scarpine, Oliver Friedrich, Michael Schubnell, H. T. Diehl, Enrique Gaztanaga, Michael Troxel, T. M. C. Abbott, David Bacon, Martin Crocce, Pablo Fosalba, A. Carnero Rosell, Marcelle Soares-Santos, Niall MacCrann, S. Everett, Peter Melchior, David J. Brooks, R. Cawthon, Elisabeth Krause, E. J. Sanchez, Antonella Palmese, M. A. G. Maia, M. E. C. Swanson, A. A. Plazas, D. L. Burke, S. Santiago, J. Annis, I. Sevilla-Noarbe, T. McClintock, S. Allam, Robert A. Gruendl, J. De Vicente, L. N. da Costa, Santiago Avila, Carlos Solans Sanchez, Chihway Chang, Bhuvnesh Jain, M. D. Johnson, Joe Zuntz, Niall Jeffrey, I. Ferrero, Tim Eifler, G. Gutierrez, M. Gatti, Henry Luce Foundation, Department of Energy (US), National Science Foundation (US), Ministerio de Ciencia, Innovación y Universidades (España), Science and Technology Facilities Council (UK), University of Illinois, Kavli Institute for Theoretical Physics, University of Chicago, The Ohio State University, Texas A&M University, Financiadora de Estudos e Projetos (Brasil), Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de Janeiro, Conselho Nacional de Desenvolvimento Científico e Tecnológico (Brasil), Ministério da Ciência, Tecnologia e Inovação (Brasil), German Research Foundation, European Commission, Generalitat de Catalunya, and Fermilab
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Cosmology and Nongalactic Astrophysics (astro-ph.CO) ,Large-scale structure of Universe ,Higher education ,FOS: Physical sciences ,Library science ,Astrophysics::Cosmology and Extragalactic Astrophysics ,7. Clean energy ,01 natural sciences ,Gravitational lensing: weak ,Observatory ,0103 physical sciences ,media_common.cataloged_instance ,MECÂNICA ESTATÍSTICA ,European union ,Astronomy observatory ,010303 astronomy & astrophysics ,media_common ,Physics ,010308 nuclear & particles physics ,business.industry ,European research ,Cosmology: observations ,Astronomy and Astrophysics ,13. Climate action ,Space and Planetary Science ,Fundamental physics ,Christian ministry ,business ,National laboratory ,Astrophysics - Cosmology and Nongalactic Astrophysics - Abstract
We present a simulated cosmology analysis using the second and third moments of the weak lensing mass (convergence) maps. The second moment, or variances, of the convergence as a function of smoothing scale contains information similar to standard shear two-point statistics. The third moment, or the skewness, contains additional non-Gaussian information. The analysis is geared towards the third year (Y3) data from the Dark Energy Survey (DES), but the methodology can be applied to other weak lensing data sets. We present the formalism for obtaining the convergence maps from the measured shear and for obtaining the second and third moments of these maps given partial sky coverage. We estimate the covariance matrix from a large suite of numerical simulations. We test our pipeline through a simulated likelihood analyses varying 5 cosmological parameters and 10 nuisance parameters and identify the scales where systematic or modelling uncertainties are not expected to affect the cosmological analysis. Our simulated likelihood analysis shows that the combination of second and third moments provides a 1.5 per cent constraint on S8 σ8(ωm/0.3)0.5 for DES Year 3 data. This is 20 per cent better than an analysis using a simulated DES Y3 shear two-point statistics, owing to the non-Gaussian information captured by the inclusion of higher order statistics. This paper validates our methodology for constraining cosmology with DES Year 3 data, which will be presented in a subsequent paper., Funding for the DES Projects has been provided by the U.S. Department of Energy, the U.S. National Science Foundation, the Ministry of Science and Education of Spain, the Science and Technology Facilities Council of the United Kingdom, the Higher Education Funding Council for England, the National Center for Supercomputing Applications at the University of Illinois at Urbana-Champaign, the Kavli Institute of Cosmological Physics at the University of Chicago, the Center for Cosmology and Astro-Particle Physics at the Ohio State University, the Mitchell Institute for Fundamental Physics and Astronomy at Texas A&M University, Financiadora de Estudos e Projetos, Fundac¸ao Carlos Chagas Filho de Amparo ˜ a Pesquisa do ` Estado do Rio de Janeiro, Conselho Nacional de Desenvolvimento Cient´ıfico e Tecnologico and the Minist ´ erio da Ci ´ encia, Tecnologia ˆ e Inovac¸ao, the Deutsche Forschungsgemeinschaft and the Collabo- ˜ rating Institutions in the Dark Energy Survey. The Collaborating Institutions are Argonne National Laboratory, the University of California, Santa Cruz, the University of Cambridge, Centro de Investigaciones Energeticas, Medioambientales y ´ Tecnologicas-Madrid, the University of Chicago, University College ´ London, the DES-Brazil Consortium, the University of Edinburgh, the Eidgenossische Technische Hochschule (ETH) Z ¨ urich, Fermi ¨ National Accelerator Laboratory, the University of Illinois at UrbanaChampaign, the Institut de Ciencies de l’Espai (IEEC/CSIC), the ` Institut de F´ısica d’Altes Energies, Lawrence Berkeley National Laboratory, the Ludwig-Maximilians Universitat M¨ unchen, and the ¨ associated Excellence Cluster Universe, the University of Michigan, the National Optical Astronomy Observatory, the University of Nottingham, the Ohio State University, the University of Pennsylvania, the University of Portsmouth, SLAC National Accelerator Laboratory, Stanford University, the University of Sussex, Texas A&M University, and the OzDES Membership Consortium. Based in part on observations at Cerro Tololo Inter-American Observatory, National Optical Astronomy Observatory, which is operated by the Association of Universities for Research in Astronomy (AURA) under a cooperative agreement with the National Science Foundation. The DES data management system is supported by the National Science Foundation under Grant Numbers AST-1138766 and AST-1536171. The DES participants from Spanish institutions are partially supported by MINECO under grants AYA2015- 71825, ESP2015-66861, FPA2015-68048, SEV-2016-0588, SEV2016-0597, and MDM-2015-0509, some of which include ERDF funds from the European Union. IFAE is partially funded by the CERCA program of the Generalitat de Catalunya. Research leading to these results has received funding from the European Research Council under the European Union 7th Framework Program (FP7/2007-2013) including ERC grant agreements 240672, 291329, and 306478. We acknowledge support from the Brazilian Instituto Nacional de Ciencia e Tecnologia (INCT) e-Universe (CNPq grant ˆ 465376/2014-2). This manuscript has been authored by Fermi Research Alliance, LLC under Contract No. DE-AC02-07CH11359 with the U.S. Department of Energy, Office of Science, Office of High Energy Physics.
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- 2020
68. Effects of calibrated delayed winter pruning on Vitis vinifera L. ‘Pinot Noir’ grapevines in relation to different training systems
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M. Gatti, Alessandra Garavani, S. Poni, Tommaso Frioni, and F. J. Pirez
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Horticulture ,pruning ,Settore AGR/03 - ARBORICOLTURA GENERALE E COLTIVAZIONI ARBOREE ,Vitis vinifera ,Pruning ,Mathematics - Published
- 2020
69. Systems genetics uncovers microbe-lipid-host connections in the murine gut
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Qijun Zhang, Kazuyuki Kasahara, Julia H. Kemis, Helen E. Blackwell, Kathryn L. Schueler, Marcus M. Seldin, Gregory R. Keele, Joshua J. Coon, Gary A. Churchill, Thiru R. Reddy, Jason D. Russell, Thomas J Polaske, Donald S. Stapleton, Vanessa Linke, Mary E. Rabaglia, Alan D. Attie, Mark P. Keller, Daniel E Manson, Ian J. Miller, Edna A. Trujillo, Katherine A. Overmyer, Daniel M. Gatti, Robert L. Kerby, Lindsay L. Traeger, Aldons J. Lusis, Duy Pham, Federico E. Rey, Karl W. Broman, Eugenio I. Vivas, and Joseph P. Gerdt
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Genetics ,education.field_of_study ,Lipopolysaccharide ,Host (biology) ,Population ,Biology ,Quantitative trait locus ,Ornithine ,biology.organism_classification ,Phenotype ,chemistry.chemical_compound ,chemistry ,Genetic variation ,education ,Akkermansia muciniphila - Abstract
The molecular bases of how host genetic variation impact gut microbiome remain largely unknown. Here, we used a genetically diverse mouse population and systems genetics strategies to identify interactions between molecular phenotypes, including microbial functions, intestinal transcripts and cecal lipids that influence microbe-host dynamics. Quantitative trait loci (QTL) analysis identified genomic regions associated with variations in bacterial taxa, bacterial functions, including motility, sporulation and lipopolysaccharide production, and levels of bacterial- and host-derived lipids. We found overlapping QTL for the abundance of Akkermansia muciniphila and cecal levels of ornithine lipids (OL). Follow-up studies revealed that A. muciniphila is a major source of these lipids in the gut, provided evidence that OL have immunomodulatory effects and identified intestinal transcripts co-regulated with these traits. Collectively, these results suggest that OL are key players in A. muciniphila-host interactions and support the role of host genetics as a determinant of responses to gut microbes.
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- 2021
70. Estimated direct costs of renal cancer by stage and care phase: a whole disease modeljuj
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A Buja, G De Luca, M Gatti, F Bonaldi, M Gardi, A Bortolami, M Sepulcri, V Baldo, M Scioni, and U Basso
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Public Health, Environmental and Occupational Health - Abstract
Background Renal cell carcinoma (RCC) is the seventh most common neoplasm in high-income countries. New clinical pathways have been developed to deal with this tumor, which include costly drugs that pose an economic threat to the sustainability of healthcare services. This study provides an estimate of the direct costs of care for patients with RCC by stage of disease (early vs advanced) at diagnosis, and disease management phase along the pathway recommended by local and international guidelines. Methods Considering the clinical pathway for RCC adopted in the Veneto region (north-east Italy) and the latest guidelines, we developed a very detailed “whole-disease” model that covers the probabilities of all potentially necessary diagnostic and therapeutic action involved in the management of RCC. Based on the cost of each procedure according to the Veneto Regional Authority's official reimbursement tariffs, we estimated the total and average per-patient costs by stage of disease (early or advanced) and phase of its management. Results In the first year after diagnosis, the mean expected cost of a patient with RCC is €12,991 if it is localized or locally-advanced, and reaches €40,586 if it is advanced. For early disease, the main cost is incurred by surgery, whereas medical therapy (first and second line) and supportive care become increasingly important for metastatic disease. Conclusions It is crucially important to examine the direct costs of care for RCC, and to predict the burden on healthcare services of new oncological therapies and treatments, as the findings could be useful for policy-makers planning the allocation of resources. Key messages An estimation of the direct costs of renal cell carcinoma, and in general for cancer, appears fundamental to predict the burden of new oncological therapies and treatments on healthcare services. Our model could represent a useful tool for policy-makers in the optimization of resources allocation, especially in a time of budget constraints.
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- 2021
71. Process Design and Techno-Economic Assessment of biogenic CO2 Hydrogenation-to-Methanol with innovative catalyst
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G Lombardelli, S Consonni, A Conversano, M Mureddu, A Pettinau, and M Gatti
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History ,Computer Science Applications ,Education - Abstract
A small-scale 10 ton per day methanol (MeOH) synthesis plant, from CO2 and hydrogen, is designed and simulated with Aspen Plus and a techno-economic analysis is conducted. The e-fuel (MeOH) is produced in a conventional fixed bed reactor featuring an innovative Cu/Zn/Al/Zr catalyst, converting biogenic CO2 from a biogas upgrading plant with H2 produced by a grid powered PEM electrolyzer. The process is thermally autonomous as a result of heat integration and combustion of purged unconverted reactants. A sensitivity analysis is carried out in order to evaluate and compare the impact of the different technical (purge fraction, Gas Hourly Space Velocity and Pressure of the methanol synthesis) and economic parameters (Capital Charge Factor, electricity and H2 cost) on the Levelized Cost Of Methanol (LCOM). Results show that, although the energy efficiency is greater (47.4 % electricity to methanol conversion) in the scenario with “self-sufficiency” in which all the net heat required by the process is provided by off-gas streams, the case with the highest profitability is the one with maximum methanol yield and, therefore, minimum purge and non-zero thermal energy import (provided by a biogas boiler). The best case scenario features a LCOM equal to 1,361 €/tonMeOH, with a GHSV of 7,500 h−1 and synthesis reactor operating at 70 bar, 250 °C. H2 production cost is the key variable and shall be reduced from the base case value of 5.8 €/kgH2 to 1.6 €/kgH2 in order to make the CO2 to methanol plant competitive with a MeOH market price of 550 €/tonMeOH; synthesis reactor operating conditions have more limited impact from a cost perspective, except for the purge fraction that shall be optimized to maximize the amount of MeOH produced.
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- 2022
72. New Experimental Vapor-Liquid Equilibria Data and Thermodynamic Modelling for R1234yf/propane/R32 as low-GWP Mixtures in Heat Pump Applications
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A Panzeri, D Di Bona, S Signorini, L Molinaroli, and M Gatti
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History ,Computer Science Applications ,Education - Abstract
This paper presents new experimental results for the Vapor – Liquid Equilibria of binary mixtures of R1234yf and propane at 277 and 313 K. The newly collected data are then used, in combination with other existing data retrieved from the literature, to calibrate the Peng-Robinson Equation of State with suitable accuracy for domestic vapour compression heat pump cycles simulations. After calibration, the Equation of State is applied to numerical simulations, in Aspen Plus, aimed at finding the optimal refrigerant composition, among ternary mixtures containing R1234yf, propane and R32. Results identify a Pareto curve where the optimal mixtures (with flammability lower or equal to A2L and GWP < 500) are represented in terms of two contrasting objectives: COP and the volumetric heating effect. Ternary mixtures containing propane and R1234yf respectively in the range 0÷12%mass and 18÷30%mass are Pareto optimal: the mixture with the best COP (2.7% lower than R410A one) is the binary pair R32 = 70% + R1234yf = 30%, a composition very close to the one of the commercial refrigerant R454B. On the other hand, the mixture with the largest volumetric effect (6.5% higher than R410A one) is the ternary blend R32 = 70% + R1234yf = 18% + propane = 12%. This study confirms that is quite challenging to find R410A replacements featuring at the same time reasonable heating capacity and a COP not lower than R410A one.
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- 2022
73. Une qualité d’IRM insuffisante (PI-QUAL < 3) sous-estime le stade T et est associée à une progression sur la pièce de prostatectomie radicale
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O. Windisch, D. Benamran, M. Martins Favre, R. Diamand, M. Djouhri, M. Chevallier, B. Guillaume, M. Oderda, M. Gatti, R. Faletti, Y. Lefebvre, S. Bodard, C. Dariane, and G. Fiard
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Urology - Published
- 2022
74. Quali e quanti sono i batteri lattici nel latte per produrre formaggi a latte crudo? Una revisione critica della letteratura scientifica
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M. Gatti, L. Bettera, A. Levante, E. Bancalari, B. Bottari, and E. Neviani
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General Medicine - Published
- 2022
75. AB1018 RELATIONSHIP BETWEEN AORTIC CALCIFICATIONS AND DXA AND RADIOFREQUENCY ECHOGRAPHIC MULTI-SPECTROMETRY (REMS) ACQUISITIONS
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A. Fassio, S. Andreola, D. Gatti, M. Gatti, G. Gambaro, O. Viapiana, V. Messina, G. Zanetti, F. Pistillo, M. Rossini, and G. Adami
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Rheumatology ,Immunology ,Immunology and Allergy ,General Biochemistry, Genetics and Molecular Biology - Abstract
BackgroundData on the relationship between peritoneal dialysis (PD), BMD and aortic calcifications (AOC) are lacking.Objectivesto study the relationship between the degree of AOC and DXA and Radiofrequency Echographic Multi-Spectrometry (REMS) acquisitions.MethodsConsecutive patients referring to the PD our clinic were enrolled. Lumbar spine (LS) and proximal femur REMS scans were performed, and LS (anteroposterior and laterolateral) and proximal femur DXA scans were performed as well. The degree of AOC was assessed through the semiquantitative score described by Kauppila et al, and applied to the laterolateral LS DXA scans. To test for correlations between different variables, we used the Pearson’s correlation for continuous variables and Spearman’s rho for discrete variables. Multiple regression analysis was performed to adjust for age and body mass index (BMI) the correlation between BMD and the CKD duration. Written informed consent was obtained from all participants (protocol 1483CESC).Results41 total patients were enrolled (29 males, 19 females). Median disease duration of CKD [IQR]: 132 months [48-140]. 15% had vertebral fractures at the DXA Vertebral Fracture Assessment (VFA). The median calcification score [IQR] was 2 [0-6] (min-max 0-20).We found a statistically significant positive correlation of moderate strength between the total calcification score and the difference between the DXA AP T-score and the DXA LL T-score at the LS (pFigure 1.scatter plot reporting the relationship between the difference between the AP and LL T-scores and the aortic calcifications score.After adjustment for confounders, we found a significant negative between the LS and femoral neck BMD measured through REMS and CKD duration (Table 1). The same correlation was not significant then BMD was assessed with DXA.Table 1.multiple linear regression analysis for REMS T-score at each site after adjustment for age and BMI. BMI, body mass index; β, standardised coefficient.REMS lumbar spine T-scoreβpCKD duration (months)-0.2280.035Age (years)-0.511BMI (kg/m2)0.566REMS femoral neck T-scoreβpCKD duration (months)-0.2100.04Age (years)-0.612BMI (kg/m2)0.484REMS total hip T-scoreβpCKD duration (months)-0.1530.219Age (years)-0.523BMI (kg/m2)0.560ConclusionOur study confirmed that the overestimation of DXA BMD assessed with the anteroposterior scan is indeed influenced by AOC. Furthermore, our data suggest that REMS might be an interesting tool for the investigation of bone changes in CKD.Disclosure of InterestsAngelo Fassio: None declared, Stefano Andreola: None declared, Davide Gatti Speakers bureau: Amgen, Celgene Eli-Lilly, MSD-Italia, Organon, UCB, Paid instructor for: Amgen, Celgene Eli-Lilly, MSD-Italia, Organon, UCB, Matteo Gatti: None declared, Giovanni Gambaro Speakers bureau: Vitor Pharma, Ombretta Viapiana: None declared, Valeri Messina: None declared, Giulia Zanetti: None declared, Francesca Pistillo: None declared, Maurizio Rossini Speakers bureau: Abiogen, Amgen, Abbvie, BMS, Celgene, Eli-Lilly, Galapagos, Grunenthal, MSD, Novartis, Pfizer, Sanofi, Sandoz, Theramex, UCB., Giovanni Adami: None declared
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- 2022
76. PD-0414 Trend over time of patient-reported QoL domains after pelvic nodal irradiation for prostate cancer
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A. Faiella, A. Gebbia, E. Villa, J.M. Waskiewicz, A. Magli, B. Avuzzi, E. Garibaldi, D. Cante, G. Girelli, M. Gatti, L. Ferella, B. Noris Chiorda, L. Rago, P. Ferrari, A. Bresolin, C. Piva, F. Badenchini, T. Rancati, R. Valdagni, V. Vavassori, F. Munoz, G. Sanguineti, N. Di Muzio, C. Fiorino, and C. Cozzarini
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Oncology ,Radiology, Nuclear Medicine and imaging ,Hematology - Published
- 2022
77. Genome-wide association mapping of ethanol sensitivity in the Diversity Outbred mouse population
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Kayvon Sharif, Walter M. Taylor, Mary Thomas, Sophie Masneuf, Daniel M. Gatti, Erica Sluys, Abraham A. Palmer, Steven William Kasparek, Oksana Polesskaya, Andrew M. Kreuzman, Vivek M. Philip, Lauren Kuffler, Andrew Holmes, Clarissa C. Parker, Dominik Taterra, Elissa J. Chesler, and Benjamin Mansky
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Collaborative Cross Mice ,Male ,Genetics ,education.field_of_study ,Ethanol ,Quantitative Trait Loci ,Population ,Chromosome Mapping ,Medicine (miscellaneous) ,Genome-wide association study ,Single-nucleotide polymorphism ,Quantitative trait locus ,Biology ,Toxicology ,Article ,DNA sequencing ,Alcoholism ,Mice ,Psychiatry and Mental health ,Genotype ,Animals ,Allele ,education ,Gene ,Genome-Wide Association Study - Abstract
BackgroundA strong predictor for the development of alcohol use disorders (AUDs) is altered sensitivity to the intoxicating effects of alcohol. Individual differences in the initial sensitivity to alcohol are controlled in part by genetic factors. Mice offer a powerful tool for elucidating the genetic basis of behavioral and physiological traits relevant to AUDs; but conventional experimental crosses have only been able to identify large chromosomal regions rather than specific genes. Genetically diverse, highly recombinant mouse populations allow for the opportunity to observe a wider range of phenotypic variation, offer greater mapping precision, and thus increase the potential for efficient gene identification.MethodsWe have taken advantage of the Diversity Outbred (DO) mouse population to identify and precisely map quantitative trait loci (QTL) associated with ethanol sensitivity. We phenotyped 798 male J:DO mice for three measures of ethanol sensitivity: ataxia, hypothermia, and loss of the righting response. We used high density MEGAMuga and GIGAMuga arrays to obtain genotypes ranging from 77,808 – 143,259 SNPs. In addition, we performed RNA sequencing in striatum to map expression QTLs and to identify gene expression-trait correlations.ResultsWe then applied a systems genetic strategy to identify narrow QTLs and construct the network of correlations that exist between DNA sequence, gene expression values and ethanol-related phenotypes to prioritize our list of positional candidate genes.ConclusionsOur results can be used to identify alleles that contribute to AUDs in humans, elucidate causative biological mechanisms, or assist in the development of novel therapeutic interventions.
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- 2021
78. Single institution review of Mini-ACE® low-profile appendicostomy button for antegrade continence enema administration
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Joseph J. Lopez, Wendy J. Svetanoff, Nicholas Bruns, Wendy E. Lewis, Christine N. Warner, James A. Fraser, Kayla B. Briggs, Alonso Carrasco, John M. Gatti, John M. Rosen, and Rebecca M. Rentea
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Adult ,Male ,Adolescent ,Enema ,General Medicine ,Young Adult ,Treatment Outcome ,Child, Preschool ,Pediatrics, Perinatology and Child Health ,Colostomy ,Quality of Life ,Humans ,Surgery ,Female ,Child ,Constipation ,Fecal Incontinence ,Retrospective Studies - Abstract
Malone antegrade continence enemas (MACE) provide a conduit in which the patient can achieve improved continence, be clean of stool, and gain independence in maintaining bowel function. The Mini-ACE® is a low-profile balloon button that is used to facilitate the administration of antegrade enemas. We sought to describe our practice and short-term outcomes.This work is a retrospective review of the Mini-ACE® appendicostomy button from April 2019 to March 2021, with follow-up concluding in October 2021. Patient demographics, colorectal diagnoses, and outcomes were examined.Forty-three patients underwent Mini-ACE® placement; 22 (51%) were male. The average age at Mini-ACE® insertion was 9.2 years (range 3-20 years). The most common diagnoses were functional constipation in 19 (44%), anorectal malformation in 15 (35%), and Hirschsprung disease in 3 (7%), spinal differences 3 (7%). There were no intra-operative complications, but 5 (12%) required prolapse resection. The median length of stay was two days (IQR 1, 4). Patients achieved self-catheterization at 4.5 [3,7] months from MACE creation, with 38 children (88%) reporting excellent success in remaining clean of stool.The Mini-ACE® appears to be a safe and low-profile option for antegrade continence enema access. Further research is needed directly comparing complications and patient satisfaction rates between different MACE devices and overall quality of life.Level IV.
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- 2021
79. Adolescent Varicocelectomy: Success at What Cost? Clinical Outcome and Cost Comparison of Surgical Ligation and Percutaneous Embolization
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Ahmad M. El-Arabi, Azadeh Wickham, Dan Vu, and John M. Gatti
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Male ,medicine.medical_specialty ,Percutaneous ,Adolescent ,medicine.medical_treatment ,Varicocele ,Outcome (game theory) ,Recurrence ,medicine ,Humans ,Embolization ,Laparoscopy ,Ligation ,Retrospective Studies ,Cost comparison ,medicine.diagnostic_test ,Testicular Hydrocele ,business.industry ,medicine.disease ,Surgery ,Treatment Outcome ,Costs and Cost Analysis ,business - Abstract
Objectives: Evaluate clinical outcome, recurrence, morbidity, and cost associated with laparoscopic surgical ligation versus percutaneous embolization of adolescent varicocele. We hypothesize that ...
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- 2021
80. 399P Role of geriatric assessment and oncological multidimensional prognostic index in elderly patients with metastatic colorectal cancer in a real-world setting
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F. Bergamo, A. Brunello, L. Procaccio, G. Sergi, M. Gatti, E. Bergo, A. Galiano, G. Tierno, B. Chiusole, A. Feltrin, F. Daniel, A.A. Prete, M.C. De Grandis, V.M. Piva, G. Barsotti, C. Rasola, G. Maddalena, K. Cerma, S. Lonardi, and V. Zagonel
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Oncology ,Hematology - Published
- 2022
81. Assessing tension metrics with dark energy survey and Planck data
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Martin Crocce, Antonella Palmese, G. Tarle, I. Ferrero, Matt J. Jarvis, Samuel Hinton, J. Myles, David J. James, G. Gutierrez, Tim Eifler, M. A. G. Maia, M. Rodriguez-Monroy, A. Roodman, Tommaso Giannantonio, R. P. Rollins, Pablo Fosalba, D. L. Burke, J. De Vicente, J. DeRose, E. Suchyta, M Gatti, Josh Frieman, Elisabeth Krause, M. Costanzi, M. E. C. Swanson, W. G. Hartley, Joseph J. Mohr, Ben Hoyle, August E. Evrard, Juan Garcia-Bellido, Daniel Thomas, S. Samuroff, Jack Elvin-Poole, Enrique Gaztanaga, I. Harrison, M. March, Markus Rau, S. Pandey, J. Muir, S. Allam, Robert A. Gruendl, Peter Melchior, Ofer Lahav, A. A. Plazas Malagón, J. Carretero, Tamara M. Davis, E. Bertin, Michael Schubnell, B. Flaugher, V. Scarpine, Maria E. S. Pereira, Felipe Menanteau, E. M. Huff, P. Lemos, Michel Aguena, M. Carrasco Kind, W. C. Wester, Michael Troxel, A. Choi, Robert Morgan, Youngsoo Park, J. Gschwend, K. Honscheid, Gary Bernstein, I. Sevilla-Noarbe, R. L. C. Ogando, R. Cawthon, M. Soares-Santos, Ramon Miquel, A. Carnero Rosell, Christopher J. Conselice, D. L. Hollowood, N. Weaverdyck, Peter Doel, Marco Raveri, K. D. Eckert, T. N. Varga, H. T. Diehl, David Bacon, Niall MacCrann, S. Serrano, Paul Martini, A. Campos, Agnès Ferté, David J. Brooks, J. Prat, S. Everett, Marcos Lima, M. Smith, Daniel Gruen, Jennifer L. Marshall, Dragan Huterer, D. W. Gerdes, J. Annis, Joe Zuntz, F. Paz-Chinchón, Andrew R. Liddle, Jochen Weller, F. J. Castander, C. Doux, Chun-Hao To, E. J. Sanchez, Jonathan Blazek, L. F. Secco, Scott Dodelson, Santiago Avila, Chihway Chang, S. Desai, UAM. Departamento de Física Teórica, Lemos, P., Raveri, M., Campos, A., Park, Y., Chang, C., Weaverdyck, N., Huterer, D., Liddle, A. R., Blazek, J., Cawthon, R., Choi, A., Derose, J., Dodelson, S., Doux, C., Gatti, M., Gruen, D., Harrison, I., Krause, E., Lahav, O., Maccrann, N., Muir, J., Prat, J., Rau, M. M., Rollins, R. P., Samuroff, S., Zuntz, J., Aguena, M., Allam, S., Annis, J., Avila, S., Bacon, D., Bernstein, G. M., Bertin, E., Brooks, D., Burke, D. L., Carnero Rosell, A., Carrasco Kind, M., Carretero, J., Castander, F. J., Conselice, C., Costanzi, M., Crocce, M., Pereira, M. E. S., Davis, T. M., De Vicente, J., Desai, S., Diehl, H. T., Doel, P., Eckert, K., Eifler, T. F., Elvin-Poole, J., Everett, S., Evrard, A. E., Ferrero, I., Ferté, A., Flaugher, B., Fosalba, P., Frieman, J., García-Bellido, J., Gaztanaga, E., Gerdes, D. W., Giannantonio, T., Gruendl, R. A., Gschwend, J., Gutierrez, G., Hartley, W. G., Hinton, S. R., Hollowood, D. L., Honscheid, K., Hoyle, B., Huff, E. M., James, D. J., Jarvis, M., Lima, M., Maia, M. A. G., March, M., Marshall, J. L., Martini, P., Melchior, P., Menanteau, F., Miquel, R., Mohr, J. J., Morgan, R., Myles, J., Ogando, R. L. C., Palmese, A., Pandey, S., Paz-Chinchón, F., Plazas Malagón, A. A., Rodriguez-Monroy, M., Roodman, A., Sanchez, E., Scarpine, V., Schubnell, M., Secco, L. F., Serrano, S., Sevilla-Noarbe, I., Smith, M., Soares-Santos, M., Suchyta, E., Swanson, M. E. C., Tarle, G., Thomas, D., To, C., Troxel, M. A., Varga, T. N., Weller, J., Wester, W., Des, Collaboration, National Science Foundation (US), Ministerio de Ciencia, Innovación y Universidades (España), European Commission, Generalitat de Catalunya, Fermilab, Institut d'Astrophysique de Paris (IAP), Institut national des sciences de l'Univers (INSU - CNRS)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), and DES
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Cosmology and Nongalactic Astrophysics (astro-ph.CO) ,Statistical [Methods] ,Physics beyond the Standard Model ,Cosmic microwave background ,FOS: Physical sciences ,Lambda-CDM model ,robustness ,Astrophysics::Cosmology and Extragalactic Astrophysics ,01 natural sciences ,Cosmology: Observations ,Observations [Cosmology] ,Cosmological parameters ,Cosmology: observations ,Methods: statistical ,Methods: Statistical ,Bayes' theorem ,symbols.namesake ,statistical, cosmological parameters, cosmology: observations [methods] ,0103 physical sciences ,ST/T000473/1 ,Statistical physics ,[PHYS.PHYS.PHYS-INS-DET]Physics [physics]/Physics [physics]/Instrumentation and Detectors [physics.ins-det] ,Planck ,Instrumentation and Methods for Astrophysics (astro-ph.IM) ,010303 astronomy & astrophysics ,STFC ,Physics ,inference ,cosmological constant ,010308 nuclear & particles physics ,Tension (physics) ,methods: statistical, cosmological parameters, cosmology: observations ,Estimator ,RCUK ,Física ,Astronomy and Astrophysics ,ST/R000476/1 ,universe ,Astronomía ,Space and Planetary Science ,symbols ,Dark energy ,Cosmological Parameters ,[PHYS.ASTR]Physics [physics]/Astrophysics [astro-ph] ,Astrophysics - Instrumentation and Methods for Astrophysics ,Astrophysics - Cosmology and Nongalactic Astrophysics - Abstract
Lemos, P. et al., Quantifying tensions – inconsistencies amongst measurements of cosmological parameters by different experiments – has emerged as a crucial part of modern cosmological data analysis. Statistically significant tensions between two experiments or cosmological probes may indicate new physics extending beyond the standard cosmological model and need to be promptly identified. We apply several tension estimators proposed in the literature to the dark energy survey (DES) large-scale structure measurement and Planck cosmic microwave background data. We first evaluate the responsiveness of these metrics to an input tension artificially introduced between the two, using synthetic DES data. We then apply the metrics to the comparison of Planck and actual DES Year 1 data. We find that the parameter differences, Eigentension, and Suspiciousness metrics all yield similar results on both simulated and real data, while the Bayes ratio is inconsistent with the rest due to its dependence on the prior volume. Using these metrics, we calculate the tension between DES Year 1 3 × 2pt and Planck, finding the surveys to be in ∼2.3σ tension under the ΔCDM paradigm. This suite of metrics provides a toolset for robustly testing tensions in the DES Year 3 data and beyond., The DES data management system is supported by the National Science Foundation under grant numbers AST-1138766 and AST-1536171. The DES participants from Spanish institutions are partially supported by Ministerio de Ciencia e Innovación (MICINN) under grants ESP2017-89838, PGC2018-094773, PGC2018-102021, SEV-2016-0588, SEV-2016-0597, and MDM-2015-0509, some of which include ERDF funds from the European Union. IFAE is partially funded by the Centres de Recerca de Catalunya (CERCA) program of the Generalitat de Catalunya. Research leading to these results has received funding from the European Research Council under the European Union’s Seventh Framework Program (FP7/2007-2013) including ERC grant agreements 240672, 291329, and 306478. We acknowledge support from the Brazilian Instituto Nacional de Ciência e Tecnologia (INCT) do e-Universo (CNPq grant 465376/2014-2). This manuscript has been authored by Fermi Research Alliance, LLC under Contract No. DE-AC02-07CH11359 with the U.S. Department of Energy, Office of Science, Office of High Energy Physics.
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- 2021
82. Dark Energy Survey Year 1 Results: Cosmological Constraints from Cluster Abundances, Weak Lensing, and Galaxy Correlations
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G. Gutierrez, David J. Brooks, Robert Morgan, Erin Sheldon, J. Prat, Joe Zuntz, S. Samuroff, Jack Elvin-Poole, Matthew R. Becker, M. Carrasco Kind, M. E. C. Swanson, Alex Drlica-Wagner, J. Carretero, Dragan Huterer, V. Scarpine, Ashley J. Ross, Tamara M. Davis, E. Bertin, Xiao Fang, Douglas L. Tucker, Kyler Kuehn, Basilio X. Santiago, T. N. Varga, M. Gatti, J. Annis, A. Carnero Rosell, Youngsoo Park, D. L. Burke, W. C. Wester, Robert A. Gruendl, R. Cawthon, Marcos Lima, I. Ferrero, Matt J. Jarvis, P. Vielzeuf, Yanxi Zhang, Tim Eifler, M. Costanzi, W. G. Hartley, Arya Farahi, Josh Frieman, J. P. Dietrich, Juan Garcia-Bellido, Eduardo Rozo, Oliver Friedrich, I. Sevilla-Noarbe, T. McClintock, J. Muir, N. Kuropatkin, J. DeRose, E. Suchyta, August E. Evrard, Martin Crocce, R. D. Wilkinson, Ben Hoyle, Jochen Weller, L. N. da Costa, Tesla E. Jeltema, G. Tarle, Antonella Palmese, M. A. G. Maia, Michael Troxel, T. M. C. Abbott, Chun-Hao To, E. J. Sanchez, J. Myles, David J. James, Enrique Gaztanaga, Jonathan Blazek, Christopher J. Conselice, Markus Rau, Sarah Bridle, Santiago Avila, Chihway Chang, P. Fosalba, Carlos Solans Sanchez, Michel Aguena, Sunayana Bhargava, A. K. Romer, S. Desai, B. Flaugher, Sebastian Bocquet, Daniel Thomas, H. T. Diehl, Ramon Miquel, D. L. Hollowood, Niall MacCrann, S. Serrano, C. Davis, M. Smith, A. A. Plazas, Gary Bernstein, Hao-Yi Wu, Daniel Gruen, A. Porredon, V. Miranda, Maria E. S. Pereira, Elisabeth Krause, S. Everett, F. Paz-Chinchón, Jennifer L. Marshall, Eli S. Rykoff, Risa H. Wechsler, Richard G. Kron, A. Roodman, Tommaso Giannantonio, A. Choi, K. Honscheid, Alexandra Amon, Felipe Menanteau, Samuel Hinton, Department of Energy (US), Ministerio de Economía y Competitividad (España), Ministerio de Ciencia, Innovación y Universidades (España), German Research Foundation, European Commission, To, C., Krause, E., Rozo, E., Wu, H., Gruen, D., Wechsler, R. H., Eifler, T. F., Rykoff, E. S., Costanzi, M., Becker, M. R., Bernstein, G. M., Blazek, J., Bocquet, S., Bridle, S. L., Cawthon, R., Choi, A., Crocce, M., Davis, C., Derose, J., Drlica-Wagner, A., Elvin-Poole, J., Fang, X., Farahi, A., Friedrich, O., Gatti, M., Gaztanaga, E., Giannantonio, T., Hartley, W. G., Hoyle, B., Jarvis, M., Maccrann, N., Mcclintock, T., Miranda, V., Pereira, M. E. S., Park, Y., Porredon, A., Prat, J., Rau, M. M., Ross, A. J., Samuroff, S., Sánchez, C., Sevilla-Noarbe, I., Sheldon, E., Troxel, M. A., Varga, T. N., Vielzeuf, P., Zhang, Y., Zuntz, J., Abbott, T. M. C., Aguena, M., Annis, J., Avila, S., Bertin, E., Bhargava, S., Brooks, D., Burke, D. L., Carnero Rosell, A., Carrasco Kind, M., Carretero, J., Chang, C., Conselice, C., da Costa, L. N., Davis, T. M., Desai, S., Diehl, H. T., Dietrich, J. P., Everett, S., Evrard, A. E., Ferrero, I., Flaugher, B., Fosalba, P., Frieman, J., García-Bellido, J., Gruendl, R. A., Gutierrez, G., Hinton, S. R., Hollowood, D. L., Huterer, D., James, D. J., Jeltema, T., Kron, R., Kuehn, K., Kuropatkin, N., Lima, M., Maia, M. A. G., Marshall, J. L., Menanteau, F., Miquel, R., Morgan, R., Muir, J., Myles, J., Palmese, A., Paz-Chinchón, F., Plazas, A. A., Romer, A. K., Roodman, A., Sanchez, E., Santiago, B., Scarpine, V., Serrano, S., Smith, M., Suchyta, E., Swanson, M. E. C., Tarle, G., Thomas, D., Tucker, D. L., Weller, J., Wester, W., Institut d'Astrophysique de Paris (IAP), Institut national des sciences de l'Univers (INSU - CNRS)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), DES, and UAM. Departamento de Física Teórica
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SDSS ,Software_OPERATINGSYSTEMS ,ComputingMethodologies_SIMULATIONANDMODELING ,Cosmological parameters ,General Physics and Astronomy ,Astrophysics ,SPT ,Astrophysics::Cosmology and Extragalactic Astrophysics ,Data_CODINGANDINFORMATIONTHEORY ,des ,Gravitation and Astrophysics ,01 natural sciences ,7. Clean energy ,Cosmology ,scale ,TRACER ,evolution ,0103 physical sciences ,Dark energy ,Hardware_INTEGRATEDCIRCUITS ,Dark matter ,010306 general physics ,Cluster analysis ,Scaling ,Weak gravitational lensing ,STFC ,Physics ,model ,COSMIC cancer database ,RCUK ,Física ,spt ,Mass Calibration ,ComputerSystemsOrganization_PROCESSORARCHITECTURES ,Galaxy ,Scale ,red galaxies ,13. Climate action ,Cosmic Shear ,mass calibration ,[PHYS.ASTR]Physics [physics]/Astrophysics [astro-ph] ,sdss ,cosmic shear ,Astrophysics - Cosmology and Nongalactic Astrophysics - Abstract
To, C. et al. (DES Collaboration), We present the first joint analysis of cluster abundances and auto or cross-correlations of three cosmic tracer fields: galaxy density, weak gravitational lensing shear, and cluster density split by optical richness. From a joint analysis (4×2pt+N) of cluster abundances, three cluster cross-correlations, and the auto correlations of the galaxy density measured from the first year data of the Dark Energy Survey, we obtain ωm=0.305-0.038+0.055 and σ8=0.783-0.054+0.064. This result is consistent with constraints from the DES-Y1 galaxy clustering and weak lensing two-point correlation functions for the flat νΛCDM model. Consequently, we combine cluster abundances and all two-point correlations from across all three cosmic tracer fields (6×2pt+N) and find improved constraints on cosmological parameters as well as on the cluster observable-mass scaling relation. This analysis is an important advance in both optical cluster cosmology and multiprobe analyses of upcoming wide imaging surveys., This Letter has gone through internal review by the DES Collaboration. This work was supported in part by the U.S. Department of Energy contract to SLAC National Accelerator Laboratory, under Contract No. DE-AC02- 76SF00515 (C. H., D. G., R. W.) including a Panofsky Fellowship awarded to D. G. E. K. is supported by the Department of Energy Grant No. DE-SC0020247. E. R. is supported by DOE Grants No. DE-SC0015975 and No. DE-SC0009913, and by NSF Grant No. 2009401. E. R. also acknowledges funding from the Cottrell Scholar program of the Research Corporation for Science Advancement. H. W. is supported by NSF Grant No. AST-1516997. Some of the computing for this project was performed on the Sherlock cluster at Stanford. We would like to thank KIPAC, Stanford University, and the Stanford Research Computing Center for providing computational resources and support that contributed to these research results. Funding for the DES Projects has been provided by the DOE and NSF(USA), MEC/MICINN/ MINECO(Spain), STFC(UK), HEFCE(UK). NCSA (UIUC), KICP(U. Chicago), CCAPP(Ohio State), MIFPA(Texas A&M), CNPQ, FAPERJ, FINEP (Brazil), DFG(Germany), and the Collaborating Institutions in the Dark Energy Survey. The Collaborating Institutions are Argonne Lab, UC Santa Cruz, University of Cambridge, CIEMAT-Madrid, University of Chicago, University College London, DES-Brazil Consortium, University of Edinburgh, ETH Zürich, Fermilab, University of Illinois, ICE (IEEC-CSIC), IFAE Barcelona, Lawrence Berkeley Lab, LMU München and the associated Excellence Cluster Universe, University of Michigan, NFS’s NOIRLab, University of Nottingham, Ohio State University, University of Pennsylvania, University of Portsmouth, SLAC National Lab, Stanford University, University of Sussex, Texas A&M University, and the OzDES Membership Consortium. Based in part on observations at Cerro Tololo Inter-American Observatory at NSFs NOIRLab (NOIRLab Prop. ID 2012B-0001; PI: J. Frieman), which is managed by the Association of Universities for Research in Astronomy (AURA) under a cooperative agreement with the National Science Foundation. The DES Data Management System is supported by the NSF under Grants No. AST-1138766 and No. AST-1536171. The DES participants from Spanish institutions are partially supported by MICINN under Grants ESP2017-89838, PGC2018-094773, PGC2018- 102021, SEV-2016-0588, SEV-2016-0597, and MDM2015-0509, some of which include ERDF funds from the European Union. I. F. A. E. is partially funded by the CERCA program of the Generalitat de Catalunya. Research leading to these results has received funding from the European Research Council under the European Union’s Seventh Framework Program (FP7/2007-2013) including ERC Grant Agreements 240672, 291329, and 306478. We acknowledge support from the Brazilian Instituto Nacional de Ciência e Tecnologia (INCT) do e-Universo (CNPq Grant No. 465376/2014-2). This manuscript has been authored by Fermi Research Alliance, LLC under Contract No. DE-AC02-07CH11359 with the U.S. Department of Energy, Office of Science, Office of High Energy Physics.
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- 2021
83. Gene loci associated with insulin secretion in islets from nondiabetic mice
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Daniel M. Gatti, Rahul Das, Brian S. Yandell, Kelly A. Mitok, Ziyue Wang, Mark P. Keller, Donnie S. Stapleton, Matthew Vincent, Karl W. Broman, Kathryn L. Schueler, Shane P Simonett, Takanao Ishimura, Alan D. Attie, Mary E. Rabaglia, Gary A. Churchill, Christopher H. Emfinger, Tim Beck, and Christina Kendziorski
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0301 basic medicine ,Genetically modified mouse ,medicine.medical_specialty ,endocrine system diseases ,medicine.medical_treatment ,Mice, Inbred Strains ,Mice, Transgenic ,Type 2 diabetes ,Protein Serine-Threonine Kinases ,Biology ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,Diabetes mellitus ,Insulin Secretion ,Genetic variation ,medicine ,Genetic predisposition ,Animals ,Humans ,Genetic Predisposition to Disease ,Insulin ,nutritional and metabolic diseases ,General Medicine ,Protein Tyrosine Phosphatases, Non-Receptor ,medicine.disease ,DNA-Binding Proteins ,030104 developmental biology ,Endocrinology ,Diabetes Mellitus, Type 2 ,Genetic Loci ,030220 oncology & carcinogenesis ,Commentary ,Secretagogue ,Research Article ,Genome-Wide Association Study ,Transcription Factors ,Genetic screen - Abstract
Genetic susceptibility to type 2 diabetes is primarily due to β cell dysfunction. However, a genetic study to directly interrogate β cell function ex vivo has never been previously performed. We isolated 233,447 islets from 483 Diversity Outbred (DO) mice maintained on a Western-style diet, and measured insulin secretion in response to a variety of secretagogues. Insulin secretion from DO islets ranged greater than 1000-fold even though none of the mice were diabetic. The insulin secretory response to each secretagogue had a unique genetic architecture; some of the loci were specific for one condition, whereas others overlapped. Human loci that are syntenic to many of the insulin secretion quantitative trait loci (QTL) from mice are associated with diabetes-related SNPs in human genome-wide association studies. We report on 3 genes, Ptpn18, Hunk, and Zfp148, where the phenotype predictions from the genetic screen were fulfilled in our studies of transgenic mouse models. These 3 genes encode a nonreceptor type protein tyrosine phosphatase, a serine/threonine protein kinase, and a Krϋppel-type zinc-finger transcription factor, respectively. Our results demonstrate that genetic variation in insulin secretion that can lead to type 2 diabetes is discoverable in nondiabetic individuals.
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- 2019
84. Author Correction: Defining the consequences of genetic variation on a proteome-wide scale
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Joel M. Chick, Steven C. Munger, Petr Simecek, Edward L. Huttlin, Kwangbom Choi, Daniel M. Gatti, Narayanan Raghupathy, Karen L. Svenson, Gary A. Churchill, and Steven P. Gygi
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Multidisciplinary - Published
- 2022
85. P-133 Clinical responses in pancreaticobiliary cancer patients who received bintrafusp alfa (BA) or BA plus CXCR1/2 inhibitor (SX-682) plus CEA/MUC1-targted vaccine (CV301)
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J. Redman, A. Spira, M. Javle, K. Kelly, N. Pavlakis, G. Jehl, M. Gatti-Mays, L. Cordes, C. Alewine, C. Pico-Navarro, J. Zebala, R. Ito, J. Marte, J. Strauss, C. Floudas, D. Pastor, D. Francis, E. Redmond, J. Gulley, and J. Schlom
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Oncology ,Hematology - Published
- 2022
86. Comparison of a finite volume and two Lattice Boltzmann solvers for swirled confined flows
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A. Aniello, D. Schuster, P. Werner, J.F. Boussuge, M. Gatti, C. Mirat, L. Selle, T. Schuller, T. Poinsot, and U. Rüde
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General Computer Science ,General Engineering - Published
- 2022
87. AB1017 RADIOFREQUENCY ECHOGRAPHIC MULTI-SPECTROMETRY (REMS) AND DUAL-ENERGY X-RAYS ABSORPTIOMETRY FOR THE EVALUATION OF BONE MINERAL DENSITY IN A PERITONEAL DIALYSIS SETTING
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A. Fassio, S. Andreola, D. Gatti, M. Gatti, G. Gambaro, M. Rossini, O. Viapiana, G. Zanetti, F. Pistillo, V. Messina, and G. Adami
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Rheumatology ,Immunology ,Immunology and Allergy ,General Biochemistry, Genetics and Molecular Biology - Abstract
BackgroundRadiofrequency echographic multi-spectrometry (REMS) is a novel ultrasound-based technique that has shown good reliability in the assessment of bone mineral density (BMD).ObjectivesThe aim of this study was to compare the performance of the REMS BMD assessment with dual-energy X-rays absorptiometry (DXA) in a cohort of patients affected by end-stage renal disease undergoing peritoneal dialysis (PD).MethodsConsecutive patients referring to the PD clinic of our hospital were enrolled. Lumbar spine and proximal femur REMS scans were performed, and lumbar spine (anteroposterior and laterolateral) and proximal femur DXA scans were performed as well. Clinical data were extracted from medical records. The risk assessment outputs of two fracture risk algorithms (FRAX and DeFRA), calculated upon the worst BMD obtained from either technique were compared as well. Analysis of variance (ANOVA) with post hoc analysis (Bonferroni) and a two-sided Student’s t-test were used to estimate the absolute differences between groups.Written informed consent was obtained from all participants included (protocol 1483 CESC).Results41 total patients were enrolled (Table 1). No significant differences were documented between the BMD T-scores measured through DXA or REMS at the proximal femur. At the lumbar spine, the DXA laterolateral T-score was not significantly different from that of REMS, while the DXA anteroposterior T-score was significantly higher than both the anteroposterior DXA and the REMS measurements (Figure 1, panel A and B). When either DXA or REMS was adopted, no significant difference in the fracture risk estimate was found for both algorithms (Figure 1, panel C and D).Table 1.anthropometrics, clinical and biochemical characteristics of the enrolled sample. CKD, chronic kidney disease; PTH, parathyroid hormone; ALP, alkaline phosphatase; IQR, interquartile range; VFA, vertebral fracture assessment.Sample size (M)41 (29)Age (y)Median [IQR]62 [52-73]Height (cm)Median [IQR]170 [165-176]Body weight (Kg)Median [IQR]74 [61-83]Body mass index (Kg/m2)Median [IQR]25 [22-27.8]Disease duration – CKD (months)Median [IQR]132 [48-140]Dialysis duration (months)Median [IQR]10 [3-24]S-calcium (mg/dL)Median [IQR]9.1 [8.6-9.4]S-phosphorous (mg/dL)Median [IQR]5.4 [4.6-6.4]PTH (pg/mL)Median [IQR]31.4 [22.8-46.8]25OH Vitamin D (nmol/L)Median [IQR]53 [36-72]Patients with morphometric fractures (VFA)15%Patients with femoral fractures2.4%Total n° of morphometric fractures12Figure 1.comparison of the mean T-scores (error bars represent 95%CI) measured with DXA and REMS at the lumbar spine (panel A), and at the femur (panel B). Comparison between the DeFRA DXA and REMS-derived outputs (panel C) and FRAX DXA and REMS-derived outputs (panel D) raw and after correction for TBS. DeFRA, FRAX-derived risk assessment tool; FRAX, Fracture Risk Assessment tool; AP, anteroposterior; LL, latero-lateral; TH, total hip; FN, femoral neck; TBS, trabecular bone score.ConclusionOur data showed a good agreement, in a real-life PD setting, between the DXA and REMS-derived BMDs and in the consequent fracture risk assessment obtained with the FRAX or DeFRA tools.Disclosure of InterestsAngelo Fassio: None declared, Stefano Andreola: None declared, Davide Gatti Paid instructor for: Amgen, Celgene Eli-Lilly, MSD-Italia, Organon, UCB., Consultant of: Amgen, Celgene Eli-Lilly, MSD-Italia, Organon, UCB., Matteo Gatti: None declared, Giovanni Gambaro Speakers bureau: Vifor Pharma, Maurizio Rossini Speakers bureau: Abiogen, Amgen, Abbvie, BMS, Celgene, Eli-Lilly, Galapagos, Grunenthal, MSD, Novartis, Pfizer, Sanofi, Sandoz, Theramex, UCB., Ombretta Viapiana: None declared, Giulia Zanetti: None declared, Francesca Pistillo: None declared, Valeri Messina: None declared, Giovanni Adami: None declared
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- 2022
88. AB1019 THE EFFECTS OF THREE DIFFERENT VITAMIN D3 SUPPLEMENTATION REGIMENS IN DEFICIENT SUBJECTS ON INFLAMMATORY CYTOKINES – A RANDOMISED OPEN-LABEL PARALLEL GROUPS STUDY
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A. Fassio, D. Gatti, M. Gatti, M. Rossini, E. Bertoldo, and G. Adami
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Rheumatology ,Immunology ,Immunology and Allergy ,General Biochemistry, Genetics and Molecular Biology - Abstract
BackgroundThe effects of cholecalciferol supplementation on the regulation of inflammatory cytokines are still unclear.ObjectivesThis is a preliminary analysis on exploratory outcomes the DIBA/11 RCT [1,2] and aimed to compare the effects on serum inflammatory cytokines of three different regimes of cholecalciferol supplementation in vitamin D-deficient subjects.MethodsWe evaluated, in healthy subjects affected by vitamin D deficiency (defined as 25OHDSerum TNFα, interleukin-6 (IL6), interleukin-17 (IL17) and interleukin-10 (IL10) were dosed at baseline, Day 28, 53, 84 and 112. This study was approved by the institutional research committee (protocol identification: DIBA/11,EudraCT Number:2017-000194-36). Supported by Abiogen Pharma, Italy).ResultsA total of 75 subjects were randomized to receive one supplementation regimen. The descriptive of the sample at baseline and relative cytokines levels at the various observation points are reported in Table 1. The absolute changes of IL6, IL17 and IL10 are depicted in Figure 1. No significant differences were found among the three groups. TNFα was undetectable at baseline and at any time point.Table 1.anthropometrics and laboratory parameters at baseline (mean values ± standard deviation)ParameterAll patients (N=75)Daily 10.000 Ui(N = 25)Weekly 50.000 Ui(n = 25)Biweekly 100.000 Ui(N = 25)p-value (ANOVA)M:F31:4412:137:1812:13NSAge (years)34.1 ± 10.230.2 ± 9.936.7 ± 8.735.4 ± 11.00.059Body Weight (kg)66.7 ± 12.465.8 ± 13.267.8 ± 10.866.6 ± 13.7NSBMI23.1 ± 2.622.55 ± 2.723.8 ± 2.222.8 ± 2.7NSBaseline 25OHD (ng/mL)13.5 ± 3.714.6 ± 3.912.8 ± 313.5 ± 4.1NSBaseline IL-6 (pg/mL)1.3 ± 1.20.9 ± 0.61.4 ± 1.61.6 ± 1.3NSBaseline IL-17 (pg/mL)0.4 ± 1.80.7 ± 30.2 ± 1.10.2 ± 0.7NSBaseline IL-10 (pg/mL)0.9 ± 0.90.8 ± 0.71.2 ± 1.20.8 ± 0.7NSFigure 1.absolute changes of IL17, IL6 and IL10. *pConclusionIn the overall cohort we found slight decreases in serum IL6 and IL17 serum levels. No differences were found among groups.References[1]Fassio A, Adami G, Rossini M, et al. Pharmacokinetics of Oral Cholecalciferol in Healthy Subjects with Vitamin D Deficiency: A Randomized Open-Label Study. Nutrients. 2020;12(6).[2]Fassio A, Gatti D, Rossini M, et al. Pharmacodynamics of Oral Cholecalciferol in Healthy Individuals with Vitamin D Deficiency: A Randomized Open-Label Study. Nutrients. 2021;13(7):2293.Disclosure of InterestsAngelo Fassio: None declared, Davide Gatti Speakers bureau: Amgen, Celgene Eli-Lilly, MSD-Italia, Organon, UCB., Paid instructor for: Amgen, Celgene Eli-Lilly, MSD-Italia, Organon, UCB., Matteo Gatti: None declared, Maurizio Rossini Speakers bureau: Abiogen, Amgen, Abbvie, BMS, Celgene, Eli-Lilly, Galapagos, Grunenthal, MSD, Novartis, Pfizer, Sanofi, Sandoz, Theramex, UCB., Eugenia Bertoldo: None declared, Giovanni Adami: None declared
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- 2022
89. Tuberculosis biomarkers discovered using Diversity Outbred mice
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Daniel M. Gatti, Melanie Ginese, Claudia Abeijon, Deniz Koyuncu, Thomas E. Tavolara, Bülent Yener, M. Khalid Khan Niazi, Gillian Beamer, Carolyn Mark, Metin N. Gurcan, Igor Kramnik, Adam C. Gower, and Yanghui Liao
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education.field_of_study ,Tuberculosis ,biology ,business.industry ,Population ,biology.organism_classification ,medicine.disease ,MMP8 ,Phenotype ,Mycobacterium tuberculosis ,Genotype ,Immunology ,medicine ,Biomarker (medicine) ,Biomarker discovery ,education ,business - Abstract
BackgroundBiomarker discovery for pulmonary tuberculosis (TB) may be accelerated by modeling human genotypic diversity and phenotypic responses toMycobacterium tuberculosis(Mtb). To meet these objectives, we use the Diversity Outbred (DO) mouse population and apply novel classifiers to identify informative biomarkers from multidimensional data sets.MethodTo identify biomarkers, we infected DO mice with aerosolizedMtbconfirmed a human-like spectrum of phenotypes, examined gene expression, and inflammatory and immune mediators in the lungs. We measured 11 proteins in 453Mtb-infected and 29 non-infected mice. We have searched all combinations of six classification algorithms and 239 biomarker subsets and independently validated the selected classifiers. Finally, we selected two mouse lung biomarkers to test as candidate biomarkers of active TB, measuring their diagnostic performance in human sera acquired from the Foundation for Innovative New Diagnostics.FindingsDO mice discovered two translationally relevant biomarkers, CXCL1 and MMP8 that accurately diagnosed active TB in humans with > 90% sensitivity and specificity compared to controls. We identified them through the two classifiers that accurately diagnosed supersusceptible DO mice with early-onset TB: Logistic Regression using MMP8 as a single biomarker, and Gradient Tree Boosting using a panel of 4 biomarkers (CXCL1, CXCL2, TNF, IL-10).InterpretationThis work confirms that the DO population models human responses and can accelerate discovery of translationally relevant TB biomarkers.FundingSupport was provided by NIH R21 AI115038; NIH R01 HL145411; NIH UL1-TR001430; and the American Lung Association Biomedical Research Grant RG-349504.
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- 2021
90. The mass and galaxy distribution around SZ-selected clusters
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Edward J. Wollack, S. Goldstein, Erin S. Sheldon, Jochen Weller, L. N. da Costa, J. Elvin-Poole, Suzanne T. Staggs, Simone Ferraro, Marco Raveri, Mark J. Devlin, J. P. Dietrich, Sahar S. Allam, T. N. Varga, David Brooks, S. Pandey, M. Lokken, Brian Yanny, Maria E. S. Pereira, A. Amsellem, J. DeRose, Maria Salatino, J. McCullough, M. E. C. Swanson, M. Costanzi, C. Doux, Chun-Hao To, Cristóbal Sifón, E. J. Sanchez, Joseph J. Mohr, I. Tutusaus, I. Sevilla-Noarbe, Gary Bernstein, B. Partridge, John P. Hughes, Carlos Solans Sanchez, G. Tarle, Scott Dodelson, Chihway Chang, V. Scarpine, Keith Bechtol, Ian Harrison, Enrique Gaztanaga, B. Flaugher, Peter Doel, Nick Battaglia, Alex Drlica-Wagner, J. Myles, David J. James, N. P. Kuropatkin, H. T. Diehl, David Bacon, Kavilan Moodley, Niall MacCrann, T. M. C. Abbott, David H. Weinberg, Kyler Kuehn, M. Gatti, J. Prat, Adriano Pieres, Samuel Hinton, Bhuvnesh Jain, K. Eckert, J. De Vicente, T. Dacunha, Marcelle Soares-Santos, E. Suchyta, E. J. Baxter, D. Gruen, A. Carnero Rosell, J. Carretero, Matt Hilton, M. Belyakov, Michael Troxel, J. C. Hill, F. Paz-Chinchón, A. Alarcon, Richard P. Rollins, Antonio Campos, Ramon Miquel, S. Desai, Federico Nati, Michael D. Niemack, Sebastian Bocquet, M. Smith, M. Aguena, A. K. Romer, Daniel Thomas, E. Buckley-Geer, L. A. Page, Emmanuel Bertin, Antonella Palmese, Andrés N. Salcedo, Jeff McMahon, Agnès Ferté, Blake D. Sherwin, M. A. G. Maia, D. W. Gerdes, Ofer Lahav, I. Ferrero, Mathew S. Madhavacheril, Robert Morgan, M. Rodriguez-Monroy, Yanxi Zhang, A. A. Plazas Malagón, Andrey V. Kravtsov, S. Everett, Marco A. P. Lima, S. Adhikari, Patricio A. Gallardo, Matthew R. Becker, Basilio X. Santiago, D. L. Burke, J. Frieman, J. R. Bond, Robert A. Gruendl, M. Carrasco Kind, F. Andrade-Oliveira, Tesla E. Jeltema, Ricardo L. C. Ogando, M. Jarvis, R. Chen, Ami Choi, Elisabeth Krause, Peter Melchior, Eli S. Rykoff, Eve M. Vavagiakis, G. Gutierrez, A. Navarro-Alsina, Santiago Serrano, B. Yin, Alexandra Amon, Felipe Menanteau, James Annis, Brian J. Koopman, L. F. Secco, W. G. Hartley, Alessandro Schillaci, Devon L. Hollowood, T. Shin, University of Pennsylvania, University of Chicago, University of Hawaii, The Ohio State University, Cornell University, Max Planck Institute for Extraterrestrial Physics, Ludwig-Maximilians-Universität, NSF’s National Optical-Infrared Astronomy Research Laboratory, Universidade de São Paulo (USP), Laboratório Interinstitucional de e-Astronomia – LIneA, Argonne National Laboratory, Fermi National Accelerator Laboratory, Stanford University, Universidade Estadual Paulista (UNESP), University of Portsmouth, University of Wisconsin-Madison, Institut d’Astrophysique de Paris, University of Toronto, University College London, Carnegie Mellon University, Duke University, Instituto de Astrofisica de Canarias, Dpto. Astrofísica, National Center for Supercomputing Applications, University of Illinois at Urbana-Champaign, The Barcelona Institute of Science and Technology, Lawrence Berkeley National Laboratory, University of Trieste, INAF-Osservatorio Astronomico di Trieste, Institute for Fundamental Physics of the Universe, Observatório Nacional, IIT Hyderabad, Medioambientales y Tecnológicas (CIEMAT), Santa Cruz Institute for Particle Physics, University of Oslo, California Institute of Technology, Institut d’Estudis Espacials de Catalunya (IEEC), CSIC), University of Michigan, SLAC National Accelerator Laboratory, Denys Wilkinson Building, University of Manchester, University of Geneva, Columbia University, Flatiron Institute, Westville Campus, University of Queensland, The State University of New Jersey, Center for Astrophysics | Harvard & Smithsonian, Yale University, University of Arizona, Macquarie University, Lowell Observatory, Dunlap Institute of Astronomy & Astrophysics, University of Cambridge, Perimeter Institute for Theoretical Physics, Peyton Hall, Institució Catalana de Recerca i Estudis Avançats, University of Milano-Bicocca, Universidade Estadual de Campinas (UNICAMP), Princeton University, Haverford College, University of Sussex, UFRGS, Brookhaven National Laboratory, Pontificia Universidad Católica de Valparaíso, University of Southampton, Oak Ridge National Laboratory, NASA/Goddard Space Flight Center, Shin, T, Jain, B, Adhikari, S, Baxter, E, Chang, C, Pandey, S, Salcedo, A, Weinberg, D, Amsellem, A, Battaglia, N, Belyakov, M, Dacunha, T, Goldstein, S, Kravtsov, A, Varga, T, Abbott, T, Aguena, M, Alarcon, A, Allam, S, Amon, A, Andrade-Oliveira, F, Annis, J, Bacon, D, Bechtol, K, Becker, M, Bernstein, G, Bertin, E, Bocquet, S, Bond, J, Brooks, D, Buckley-Geer, E, Burke, D, Campos, A, Carnero Rosell, A, Carrasco Kind, M, Carretero, J, Chen, R, Choi, A, Costanzi, M, da Costa, L, Derose, J, Desai, S, de Vicente, J, Devlin, M, Diehl, H, Dietrich, J, Dodelson, S, Doel, P, Doux, C, Drlica-Wagner, A, Eckert, K, Elvin-Poole, J, Everett, S, Ferraro, S, Ferrero, I, Ferte, A, Flaugher, B, Frieman, J, Gallardo, P, Gatti, M, Gaztanaga, E, Gerdes, D, Gruen, D, Gruendl, R, Gutierrez, G, Harrison, I, Hartley, W, Hill, J, Hilton, M, Hinton, S, Hollowood, D, Hughes, J, James, D, Jarvis, M, Jeltema, T, Koopman, B, Krause, E, Kuehn, K, Kuropatkin, N, Lahav, O, Lima, M, Lokken, M, Maccrann, N, Madhavacheril, M, Maia, M, Mccullough, J, Mcmahon, J, Melchior, P, Menanteau, F, Miquel, R, Mohr, J, Moodley, K, Morgan, R, Myles, J, Nati, F, Navarro-Alsina, A, Niemack, M, Ogando, R, Page, L, Palmese, A, Partridge, B, Paz-Chinchon, F, Pereira, M, Pieres, A, Plazas Malagon, A, Prat, J, Raveri, M, Rodriguez-Monroy, M, Rollins, R, Romer, A, Rykoff, E, Salatino, M, Sanchez, C, Sanchez, E, Santiago, B, Scarpine, V, Schillaci, A, Secco, L, Serrano, S, Sevilla-Noarbe, I, Sheldon, E, Sherwin, B, Sifon, C, Smith, M, Soares-Santos, M, Staggs, S, Suchyta, E, Swanson, M, Tarle, G, Thomas, D, To, C, Troxel, M, Tutusaus, I, Vavagiakis, E, Weller, J, Wollack, E, Yanny, B, Yin, B, Zhang, Y, National Science Foundation (US), Ministerio de Ciencia, Innovación y Universidades (España), Generalitat de Catalunya, European Commission, Instituto Nacional de Ciência e Tecnologia (Brasil), Univ Penn, Univ Chicago, Univ Hawaii, Ohio State Univ, Cornell Univ, Max Planck Inst Extraterr Phys, Ludwig Maximilians Univ Munchen, NSFs Natl Opt Infrared Astron Res Lab, Lab Interinst E Astron LIneA, Argonne Natl Lab, Fermilab Natl Accelerator Lab, Stanford Univ, Univ Portsmouth, Univ Wisconsin, Inst Astrophys Paris, Sorbonne Univ, Univ Toronto, UCL, Carnegie Mellon Univ, Duke Univ, Inst Astrofis Canarias, Univ La Laguna, Natl Ctr Supercomp Applicat, Univ Illinois, Barcelona Inst Sci & Technol, Lawrence Berkeley Natl Lab, Univ Trieste, INAF Osservatorio Astron Trieste, Inst Fundamental Phys Universe, Observ Nacl, Ctr Invest Energet Medioambientales & Tecnol CIEM, Santa Cruz Inst Particle Phys, Univ Oslo, CALTECH, Inst Estudis Espacials Catalunya IEEC, CSIC, Univ Michigan, SLAC Natl Accelerator Lab, Univ Oxford, Univ Manchester, Univ Geneva, Columbia Univ, Flatiron Inst, Univ KwaZulu Natal, Univ Queensland, Rutgers State Univ, Ctr Astrophys Harvard & Smithsonian, Yale Univ, Univ Arizona, Macquarie Univ, Lowell Observ, Dunlap Inst Astron & Astrophys, Univ Cambridge, Perimeter Inst Theoret Phys, Princeton Univ, Inst Catalana Recerca & Estudis Avancats, Univ Milano Bicocca, Haverford Coll, Univ Sussex, Univ Fed Rio Grande do Sul, Brookhaven Natl Lab, Pontificia Univ Catolica Valparaiso, Univ Southampton, Oak Ridge Natl Lab, NASA, Shin, T., Jain, B., Adhikari, S., Baxter, E. J., Chang, C., Pandey, S., Salcedo, A., Weinberg, D. H., Amsellem, A., Battaglia, N., Belyakov, M., Dacunha, T., Goldstein, S., Kravtsov, A. V., Varga, T. N., Abbott, T. M. C., Aguena, M., Alarcon, A., Allam, S., Amon, A., Andrade-Oliveira, F., Annis, J., Bacon, D., Bechtol, K., Becker, M. R., Bernstein, G. M., Bertin, E., Bocquet, S., Bond, J. R., Brooks, D., Buckley-Geer, E., Burke, D. L., Campos, A., Carnero Rosell, A., Carrasco Kind, M., Carretero, J., Chen, R., Choi, A., Costanzi, M., da Costa, L. N., Derose, J., Desai, S., de Vicente, J., Devlin, M. J., Diehl, H. T., Dietrich, J. P., Dodelson, S., Doel, P., Doux, C., Drlica-Wagner, A., Eckert, K., Elvin-Poole, J., Everett, S., Ferraro, S., Ferrero, I., Ferte, A., Flaugher, B., Frieman, J., Gallardo, P. A., Gatti, M., Gaztanaga, E., Gerdes, D. W., Gruen, D., Gruendl, R. A., Gutierrez, G., Harrison, I., Hartley, W. G., Hill, J. C., Hilton, M., Hinton, S. R., Hollowood, D. L., Hughes, J. P., James, D. J., Jarvis, M., Jeltema, T., Koopman, B. J., Krause, E., Kuehn, K., Kuropatkin, N., Lahav, O., Lima, M., Lokken, M., Maccrann, N., Madhavacheril, M. S., Maia, M. A. G., Mccullough, J., Mcmahon, J., Melchior, P., Menanteau, F., Miquel, R., Mohr, J. J., Moodley, K., Morgan, R., Myles, J., Nati, F., Navarro-Alsina, A., Niemack, M. D., Ogando, R. L. C., Page, L. A., Palmese, A., Partridge, B., Paz-Chinchon, F., Pereira, M. E. S., Pieres, A., Plazas Malagon, A. A., Prat, J., Raveri, M., Rodriguez-Monroy, M., Rollins, R. P., Romer, A. K., Rykoff, E. S., Salatino, M., Sanchez, C., Sanchez, E., Santiago, B., Scarpine, V., Schillaci, A., Secco, L. F., Serrano, S., Sevilla-Noarbe, I., Sheldon, E., Sherwin, B. D., Sifon, C., Smith, M., Soares-Santos, M., Staggs, S. T., Suchyta, E., Swanson, M. E. C., Tarle, G., Thomas, D., To, C., Troxel, M. A., Tutusaus, I., Vavagiakis, E. M., Weller, J., Wollack, E. J., Yanny, B., Yin, B., and Zhang, Y.
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Cold dark matter ,Cosmology and Nongalactic Astrophysics (astro-ph.CO) ,FOS: Physical sciences ,Astrophysics ,Astrophysics::Cosmology and Extragalactic Astrophysics ,clusters: general [Galaxies] ,Cosmology: observation ,Cosmology ,Galaxies clusters general ,observations [Cosmology] ,Weak gravitational lensing ,Astrophysics::Galaxy Astrophysics ,Cosmology observation ,Physics ,Cosmology: observations ,Galaxies: evolution ,Astronomy and Astrophysics ,evolution [Galaxies] ,Cosmology observations ,Galaxies evolution ,Galaxy ,Redshift ,Galaxies: clusters: general ,Space and Planetary Science ,Atacama Cosmology Telescope ,Dark energy ,Halo ,Astrophysics - Cosmology and Nongalactic Astrophysics - Abstract
Shin, T., et al., We present measurements of the radial profiles of the mass and galaxy number density around Sunyaev–Zel’dovich (SZ)-selected clusters using both weak lensing and galaxy counts. The clusters are selected from the Atacama Cosmology Telescope Data Release 5 and the galaxies from the Dark Energy Survey Year 3 data set. With signal-to-noise ratio of 62 (45) for galaxy (weak lensing) profiles over scales of about 0.2–20 h Mpc, these are the highest precision measurements for SZ-selected clusters to date. Because SZ selection closely approximates mass selection, these measurements enable several tests of theoretical models of the mass and light distribution around clusters. Our main findings are: (1) The splashback feature is detected at a consistent location in both the mass and galaxy profiles and its location is consistent with predictions of cold dark matter N-body simulations. (2) The full mass profile is also consistent with the simulations. (3) The shapes of the galaxy and lensing profiles are remarkably similar for our sample over the entire range of scales, from well inside the cluster halo to the quasilinear regime. We measure the dependence of the profile shapes on the galaxy sample, redshift, and cluster mass. We extend the Diemer & Kravtsov model for the cluster profiles to the linear regime using perturbation theory and show that it provides a good match to the measured profiles. We also compare the measured profiles to predictions of the standard halo model and simulations that include hydrodynamics. Applications of these results to cluster mass estimation, cosmology, and astrophysics are discussed., The DES data management system is supported by the National Science Foundation under Grant Numbers AST-1138766 and AST-1536171. The DES participants from Spanish institutions are partially supported by MICINN under grants ESP2017-89838, PGC2018-094773, PGC2018-102021, SEV-2016-0588, SEV-2016-0597, and MDM-2015-0509, some of which include ERDF funds from the European Union. IFAE is partially funded by the CERCA program of the Generalitat de Catalunya. Research leading to these results has received funding from the European Research Council under the European Union’s Seventh Framework Program (FP7/2007-2013) including ERC grant agreements 240672, 291329, and 306478. We acknowledge support from the Brazilian Instituto Nacional de Ciência e Tecnologia (INCT) do e-Universo (CNPq grant no. 465376/2014-2).
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- 2021
91. Consistency of cosmic shear analyses in harmonic and real space
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David Bacon, Niall MacCrann, J. Carretero, Tamara M. Davis, Xiao Fang, Ramon Miquel, Joe Zuntz, F. Paz-Chinchón, Agnès Ferté, Dragan Huterer, Ami Choi, W. G. Hartley, A. A. Plazas, Martin Crocce, R. D. Wilkinson, J. P. Dietrich, Juan Garcia-Bellido, Antonella Palmese, S. Samuroff, I. Ferrero, M. A. G. Maia, E. Bertin, David J. James, Pablo Fosalba, Michael Schubnell, J. Gschwend, Jennifer L. Marshall, Jonathan Blazek, A. Roodman, Bhuvnesh Jain, Elisabeth Krause, Maria E. S. Pereira, Santiago Avila, Chihway Chang, G. Tarle, H. Camacho, L. F. Secco, Robert Morgan, A. Carnero Rosell, M. Costanzi, Jochen Weller, C. Doux, Chun-Hao To, E. J. Sanchez, D. L. Burke, Enrique Gaztanaga, S. Allam, Robert A. Gruendl, M. Carrasco Kind, Alexandra Amon, I. Sevilla-Noarbe, M. Soares-Santos, N. Kuropatkin, T. N. Varga, Felipe Menanteau, L. N. da Costa, M. Smith, Daniel Gruen, D. W. Gerdes, Kyler Kuehn, Michel Aguena, E. Suchyta, Michael Troxel, D. L. Hollowood, S. Serrano, David J. Brooks, Samuel Hinton, G. Gutierrez, M. Gatti, Peter Doel, UAM. Departamento de Física Teórica, Doux, C., Chang, C., Jain, B., Blazek, J., Camacho, H., Fang, X., Gatti, M., Krause, E., Maccrann, N., Samuroff, S., Secco, L. F., Troxel, M. A., Zuntz, J., Aguena, M., Allam, S., Amon, A., Avila, S., Bacon, D., Bertin, E., Brooks, D., Burke, D. L., Carnero Rosell, A., Carrasco Kind, M., Carretero, J., Choi, A., Costanzi, M., Crocce, M., da Costa, L. N., Pereira, M. E. S., Davis, T. M., Dietrich, J. P., Doel, P., Ferrero, I., Ferté, A., Fosalba, P., García-Bellido, J., Gaztanaga, E., Gerdes, D. W., Gruen, D., Gruendl, R. A., Gschwend, J., Gutierrez, G., Hartley, W. G., Hinton, S. R., Hollowood, D. L., Huterer, D., James, D. J., Kuehn, K., Kuropatkin, N., Maia, M. A. G., Marshall, J. L., Menanteau, F., Miquel, R., Morgan, R., Palmese, A., Paz-Chinchón, F., Plazas, A. A., Roodman, A., Sanchez, E., Schubnell, M., Serrano, S., Sevilla-Noarbe, I., Smith, M., Suchyta, E., Tarle, G., To, C., Varga, T. N., Weller, J., Wilkinson, R. D., Des, Collaboration, Institut d'Astrophysique de Paris (IAP), Institut national des sciences de l'Univers (INSU - CNRS)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), DES, Univ Penn, Univ Chicago, Ohio State Univ, Ecole Polytech Fed Lausanne EPFL, Universidade Estadual Paulista (Unesp), Lab Interinst E Astron LIneA, Univ Arizona, Barcelona Inst Sci & Technol, Univ Cambridge, Carnegie Mellon Univ, Duke Univ, Univ Edinburgh, Universidade de São Paulo (USP), Fermilab Natl Accelerator Lab, Stanford Univ, Univ Autonoma Madrid, Univ Portsmouth, CNRS, Sorbonne Univ, UCL, SLAC Natl Accelerator Lab, Inst Astrofis Canarias, Univ La Laguna, Natl Ctr Supercomp Applicat, Univ Illinois, Univ Trieste, INAF Osservatorio Astron Trieste, Inst Fundamental Phys Universe, Inst Estudis Espacials Catalunya IEEC, CSIC, Observ Nacl, Univ Michigan, Univ Queensland, Ludwig Maximilians Univ Munchen, Univ Oslo, CALTECH, Univ Geneva, Santa Cruz Inst Particle Phys, Ctr Astrophys Harvard & Smithsonian, Macquarie Univ, Lowell Observ, Texas A&M Univ, Inst Catalana Recerca & Estudis Avancats, Univ Wisconsin, Princeton Univ, Ctr Invest Energet Medioambientales & Tecnol CIEM, Univ Southampton, Oak Ridge Natl Lab, Max Planck Inst Extraterr Phys, and Univ Sussex
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Cosmology and Nongalactic Astrophysics (astro-ph.CO) ,Gaussian ,design ,FOS: Physical sciences ,gravitational lensing: weak ,cosmological parameters ,large-scale structure of Universe ,Astrophysics - Cosmology and Nongalactic Astrophysics ,Astrophysics::Cosmology and Extragalactic Astrophysics ,Statistical fluctuations ,01 natural sciences ,symbols.namesake ,weak [gravitational lensing] ,0103 physical sciences ,Statistical physics ,Weak ,010303 astronomy & astrophysics ,Physics ,large-scale structure of universe ,Gravitational Lensing ,COSMIC cancer database ,model ,010308 nuclear & particles physics ,Sigma ,Spectral density ,Física ,Astronomy and Astrophysics ,Dark Energy ,Redshift ,Space and Planetary Science ,symbols ,Dark energy ,cosmological parameter ,[PHYS.ASTR]Physics [physics]/Astrophysics [astro-ph] ,constraints ,Importance sampling ,intrinsic alignments - Abstract
Recent cosmic shear studies have reported discrepancies of up to $1\sigma$ on the parameter ${S_{8}=\sigma_{8}\sqrt{\Omega_{\rm m}/0.3}}$ between the analysis of shear power spectra and two-point correlation functions, derived from the same shear catalogs. It is not a priori clear whether the measured discrepancies are consistent with statistical fluctuations. In this paper, we investigate this issue in the context of the forthcoming analyses from the third year data of the Dark Energy Survey (DES-Y3). We analyze DES-Y3 mock catalogs from Gaussian simulations with a fast and accurate importance sampling pipeline. We show that the methodology for determining matching scale cuts in harmonic and real space is the key factor that contributes to the scatter between constraints derived from the two statistics. We compare the published scales cuts of the KiDS, Subaru-HSC and DES surveys, and find that the correlation coefficients of posterior means range from over 80% for our proposed cuts, down to 10% for cuts used in the literature. We then study the interaction between scale cuts and systematic uncertainties arising from multiple sources: non-linear power spectrum, baryonic feedback, intrinsic alignments, uncertainties in the point-spread function, and redshift distributions. We find that, given DES-Y3 characteristics and proposed cuts, these uncertainties affect the two statistics similarly; the differential biases are below a third of the statistical uncertainty, with the largest biases arising from intrinsic alignment and baryonic feedback. While this work is aimed at DES-Y3, the tools developed can be applied to Stage-IV surveys where statistical errors will be much smaller., Comment: Matches version accepted in MNRAS. 22 pages, 15 figures. Comments welcome!
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- 2021
92. Dark energy survey internal consistency tests of the joint cosmological probes analysis with posterior predictive distributions
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R. L. C. Ogando, J. DeRose, E. Suchyta, M. Smith, G. Tarle, Daniel Gruen, Youngsoo Park, D. W. Gerdes, S. Samuroff, T. N. Varga, R. Cawthon, David J. Brooks, J. Gschwend, Sunayana Bhargava, Michael Schubnell, K. Honscheid, Samuel Hinton, W. G. Hartley, Marcos Lima, J. P. Dietrich, G. Gutierrez, Ofer Lahav, Juan Garcia-Bellido, C. Lidman, Alexandra Amon, J. Carretero, Ramon Miquel, Peter Doel, M. Costanzi, Dragan Huterer, M. Carrasco Kind, Robert Morgan, J. Frieman, H. T. Diehl, David Bacon, Felipe Menanteau, E. Baxter, F. Paz-Chinchón, I. Ferrero, Matt J. Jarvis, J. Annis, Marco Raveri, Elisabeth Krause, M. Gatti, David J. James, Niall MacCrann, J. Muir, Tommaso Giannantonio, D. L. Burke, Pablo Fosalba, Ami Choi, Ben Hoyle, E. Bertin, A. A. Plazas, I. Sevilla-Noarbe, Bhuvnesh Jain, S. Allam, Robert A. Gruendl, V. Scarpine, Antonella Palmese, N. Kuropatkin, D. L. Hollowood, M. A. G. Maia, S. Serrano, A. Alarcon, A. Campos, E. M. Huff, L. N. da Costa, P. Lemos, Michel Aguena, R. D. Wilkinson, S. Everett, Maria E. S. Pereira, J. Prat, M. E. C. Swanson, Jochen Weller, T. M. C. Abbott, C. Doux, Chun-Hao To, Markus Rau, E. J. Sanchez, Santiago Avila, Chihway Chang, Michael Troxel, S. Desai, Joe Zuntz, Douglas L. Tucker, Kyler Kuehn, National Science Foundation (US), Ministerio de Economía y Competitividad (España), Ministerio de Ciencia, Innovación y Universidades (España), European Commission, Generalitat de Catalunya, Instituto Nacional de Ciência e Tecnologia (Brasil), Fermilab, Doux, C., Baxter, E., Lemos, P., Chang, C., Alarcon, A., Amon, A., Campos, A., Choi, A., Gatti, M., Gruen, D., Jarvis, M., Maccrann, N., Park, Y., Prat, J., Rau, M. M., Raveri, M., Samuroff, S., Derose, J., Hartley, W. G., Hoyle, B., Troxel, M. A., Zuntz, J., Abbott, T. M. C., Aguena, M., Allam, S., Annis, J., Avila, S., Bacon, D., Bertin, E., Bhargava, S., Brooks, D., Burke, D. L., Carrasco Kind, M., Carretero, J., Cawthon, R., Costanzi, M., da Costa, L. N., Pereira, M. E. S., Desai, S., Diehl, H. T., Dietrich, J. P., Doel, P., Everett, S., Ferrero, I., Fosalba, P., Frieman, J., García-Bellido, J., Gerdes, D. W., Giannantonio, T., Gruendl, R. A., Gschwend, J., Gutierrez, G., Hinton, S. R., Hollowood, D. L., Honscheid, K., Huff, E. M., Huterer, D., Jain, B., James, D. J., Krause, E., Kuehn, K., Kuropatkin, N., Lahav, O., Lidman, C., Lima, M., Maia, M. A. G., Menanteau, F., Miquel, R., Morgan, R., Muir, J., Ogando, R. L. C., Palmese, A., Paz-Chinchón, F., Plazas, A. A., Sanchez, E., Scarpine, V., Schubnell, M., Serrano, S., Sevilla-Noarbe, I., Smith, M., Suchyta, E., Swanson, M. E. C., Tarle, G., To, C., Tucker, D. L., Varga, T. N., Weller, J., Wilkinson, R. D., Institut d'Astrophysique de Paris (IAP), Institut national des sciences de l'Univers (INSU - CNRS)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), and DES
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statistical [Methods] ,Cosmology and Nongalactic Astrophysics (astro-ph.CO) ,Large-scale structure of Universe ,FOS: Physical sciences ,Dark energy ,Gravitational lensing: weak ,Methods: statistical ,gravitational lensing: weak ,methods: statistical ,dark energy ,large-scale structure of Universe ,Astrophysics - Cosmology and Nongalactic Astrophysics ,Astrophysics - Instrumentation and Methods for Astrophysics ,01 natural sciences ,Data vector ,Goodness of fit ,Consistency (statistics) ,Internal consistency ,0103 physical sciences ,Statistics ,Astrophysics - Cosmology and Nongalactic Astrophysic ,[PHYS.PHYS.PHYS-INS-DET]Physics [physics]/Physics [physics]/Instrumentation and Detectors [physics.ins-det] ,010303 astronomy & astrophysics ,Joint (geology) ,Instrumentation and Methods for Astrophysics (astro-ph.IM) ,Physics ,010308 nuclear & particles physics ,Astronomy and Astrophysics ,Data set ,Posterior predictive distribution ,Space and Planetary Science ,[PHYS.ASTR]Physics [physics]/Astrophysics [astro-ph] ,weak [Gravitational lensing] - Abstract
Doux, C., et al. DES Collaboration, Beyond ΛCDM, physics or systematic errors may cause subsets of a cosmological data set to appear inconsistent when analysed assuming ΛCDM. We present an application of internal consistency tests to measurements from the Dark Energy Survey Year 1 (DES Y1) joint probes analysis. Our analysis relies on computing the posterior predictive distribution (PPD) for these data under the assumption of ΛCDM. We find that the DES Y1 data have an acceptable goodness of fit to ΛCDM, with a probability of finding a worse fit by random chance of p = 0.046. Using numerical PPD tests, supplemented by graphical checks, we show that most of the data vector appears completely consistent with expectations, although we observe a small tension between large- and small-scale measurements. A small part (roughly 1.5 per cent) of the data vector shows an unusually large departure from expectations; excluding this part of the data has negligible impact on cosmological constraints, but does significantly improve the p-value to 0.10. The methodology developed here will be applied to test the consistency of DES Year 3 joint probes data sets., Based, in part, on observations at Cerro Tololo Inter-American Observatory at NSF’s NOIRLab (NOIRLab Prop. ID 2012B-0001; PI: J. Frieman), which is managed by the Association of Universities for Research in Astronomy (AURA) under a cooperative agreement with the National Science Foundation. The DES data management system is supported by the National Science Foundation under grant numbers AST-1138766 and AST-1536171. The DES participants from Spanish institutions are partially supported by MICINN under grants ESP2017-89838, PGC2018-094773, PGC2018-102021, SEV-2016-0588, SEV-2016-0597, and MDM-2015-0509, some of which include ERDF funds from the European Union. IFAE is partially funded by the CERCA program of the Generalitat de Catalunya. Research leading to these results has received funding from the European Research Council under the European Union’s Seventh Framework Program (FP7/2007-2013) including ERC grant agreements 240672, 291329, and 306478. We acknowledge support from the Brazilian Instituto Nacional de Ciência e Tecnologia (INCT) do e-Universo (CNPq grant 465376/2014-2). This manuscript has been authored by Fermi Research Alliance, LLC under contract no. DE-AC02-07CH11359 with the U.S. Department of Energy, Office of Science, Office of High Energy Physics.
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- 2021
93. Probing gravity with the DES-CMASS sample and BOSS spectroscopy
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Carlos Solans Sanchez, Alexandra Amon, Jack Elvin-Poole, Felipe Menanteau, Michael Schubnell, Dragan Huterer, S. Lee, Antonella Palmese, S. Everett, David J. Brooks, M. A. G. Maia, V. Scarpine, Daniel Thomas, Joseph J. Mohr, Erin Sheldon, Adriano Pieres, M. March, David J. James, M. Costanzi, F. Paz-Chinchón, Josh Frieman, Samuel Hinton, Vivian Miranda, Pablo Fosalba, J. DeRose, E. Suchyta, G. Gutierrez, M. Smith, Jennifer L. Marshall, August E. Evrard, Ashley J. Ross, Daniel Gruen, G. Tarle, E. M. Huff, P. Lemos, K. Honscheid, Ami Choi, Ben Hoyle, Ramon Miquel, Michel Aguena, J. Muir, D. W. Gerdes, J. De Vicente, I. Sevilla-Noarbe, Enrique Gaztanaga, L. F. Secco, N. Weaverdyck, A. Chen, Christopher J. Conselice, Maria E. S. Pereira, S. Samuroff, W. G. Hartley, J. Carretero, Marco Raveri, Hui Kong, J. P. Dietrich, Juan Garcia-Bellido, R. Cawthon, Christopher M. Hirata, I. Ferrero, N. Kuropatkin, P. Vielzeuf, Tim Eifler, C. D. Leonard, M. Carrasco Kind, F. Andrade-Oliveira, D. L. Burke, A. A. Plazas Malagón, T. N. Varga, Adam Amara, S. Allam, Robert A. Gruendl, M Gatti, L. N. da Costa, Ofer Lahav, Robert Morgan, M. E. C. Swanson, J. Prat, Marcos Lima, D. L. Hollowood, S. Serrano, A. Campos, C. Davis, J. Gschwend, A. Roodman, Tommaso Giannantonio, Gary Bernstein, Peter Doel, A. Carnero Rosell, H. T. Diehl, Kyler Kuehn, Niall MacCrann, Agnès Ferté, E. Bertin, Joe Zuntz, Markus Rau, Jonathan Blazek, Sarah Bridle, Scott Dodelson, S. Desai, Michael Troxel, Jochen Weller, F. J. Castander, Chun-Hao To, E. J. Sanchez, Institut d'Astrophysique de Paris (IAP), Institut national des sciences de l'Univers (INSU - CNRS)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), DES, Department of Energy (US), National Science Foundation (US), Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Generalitat de Catalunya, European Commission, Alfred P. Sloan Foundation, Ministerio de Economía y Competitividad (España), Lee, S, Huff, E M, Choi, A, Elvin-Poole, J, Hirata, C, Honscheid, K, Maccrann, N, Ross, A J, Troxel, M A, Eifler, T F, Kong, H, Ferté, A, Blazek, J, Huterer, D, Amara, A, Campos, A, Chen, A, Dodelson, S, Lemos, P, Leonard, C D, Miranda, V, Muir, J, Raveri, M, Secco, L F, Weaverdyck, N, Zuntz, J, Bridle, S L, Davis, C, Derose, J, Gatti, M, Prat, J, Rau, M M, Samuroff, S, Sánchez, C, Vielzeuf, P, Aguena, M, Allam, S, Amon, A, Andrade-Oliveira, F, Bernstein, G M, Bertin, E, Brooks, D, Burke, D L, Rosell, A Carnero, Carrasco , Kind, M, Carretero, J, Castander, F J, Cawthon, R, Conselice, C, Costanzi, M, da , Costa, L N, Pereira, M E S, De , Vicente, J, Desai, S, Diehl, H T, Dietrich, J P, Doel, P, Everett, S, Evrard, A E, Ferrero, I, Fosalba, P, Frieman, J, García-Bellido, J, Gaztanaga, E, Gerdes, D W, Giannantonio, T, Gruen, D, Gruendl, R A, Gschwend, J, Gutierrez, G, Hartley, W G, Hinton, S R, Hollowood, D L, Hoyle, B, James, D J, Kuehn, K, Kuropatkin, N, Lahav, O, Lima, M, Maia, M A G, March, M, Marshall, J L, Menanteau, F, Miquel, R, Mohr, J J, Morgan, R, Palmese, A, Paz-Chinchón, F, Pieres, A, Malagón, A A Plaza, Roodman, A, Sanchez, E, Scarpine, V, Schubnell, M, Serrano, S, Sevilla-Noarbe, I, Sheldon, E, Smith, M, Suchyta, E, Swanson, M E C, Tarle, G, Thomas, D, To, C, Varga, T N, and Weller, J
- Subjects
gravitation: model ,Astrophysics ,baryon: oscillation: acoustic ,01 natural sciences ,DESI ,large scales ,cosmological model: parameter space ,general relativity ,LENTES GRAVITACIONAIS ,cluster ,dark energy ,010303 astronomy & astrophysics ,Weak gravitational lensing ,Physics ,cosmological parameters ,gravitational lensing ,large-scale structure of the Universe ,Astrophysics - Cosmology and Nongalactic Astrophysics ,symbols ,cfhtlens ,cosmological parameter ,satellite: Planck ,Cosmology and Nongalactic Astrophysics (astro-ph.CO) ,General relativity ,FOS: Physical sciences ,Astrophysics::Cosmology and Extragalactic Astrophysics ,tomography ,efficient ,symbols.namesake ,redshift-space distortions ,statistical analysis ,gravitation: lens ,0103 physical sciences ,overlap ,structure ,Planck ,dark energy survey ,Astrophysics::Galaxy Astrophysics ,010308 nuclear & particles physics ,Astronomy and Astrophysics ,cross-correlation ,redshift ,Redshift ,Galaxy ,testing gravity ,Baryon ,Boss ,Space and Planetary Science ,Dark energy ,galaxy ,[PHYS.ASTR]Physics [physics]/Astrophysics [astro-ph] ,cosmology - Abstract
DES Collaboration: et al., The DES-CMASS sample (DMASS) is designed to optimally combine the weak lensing measurements from the Dark Energy Survey (DES) and redshift-space distortions (RSD) probed by the CMASS galaxy sample from the Baryonic Oscillation Spectroscopic Survey. In this paper, we demonstrate the feasibility of adopting DMASS as the equivalent of CMASS for a joint analysis of DES and BOSS in the framework of modified gravity. We utilize the angular clustering of the DMASS galaxies, cosmic shear of the DES METACALIBRATION sources, and cross-correlation of the two as data vectors. By jointly fitting the combination of the data with the RSD measurements from the CMASS sample and Planck data, we obtain the constraints on modified gravity parameters μ0=−0.37+0.47−0.45 and Σ0=0.078+0.078−0.082. Our constraints of modified gravity with DMASS are tighter than those with the DES Year 1 REDMAGIC sample with the same external data sets by 29 per cent for μ0 and 21 per cent for Σ0, and comparable to the published results of the DES Year 1 modified gravity analysis despite this work using fewer external data sets. This improvement is mainly because the galaxy bias parameter is shared and more tightly constrained by both CMASS and DMASS, effectively breaking the degeneracy between the galaxy bias and other cosmological parameters. Such an approach to optimally combine photometric and spectroscopic surveys using a photometric sample equivalent to a spectroscopic sample can be applied to combining future surveys having a limited overlap such as DESI and LSST., AC acknowledges support from NASA grant no. 15-WFIRST15-0008. During the preparation of this paper, C.H. was supported by the Simons Foundation, NASA, and the U.S. Department of Energy. The DES data management system is supported by the National Science Foundation under Grant Numbers AST-1138766 and AST-1536171. The DES participants from Spanish institutions are partially supported by MICINN under grants ESP2017-89838, PGC2018-094773, PGC2018-102021, SEV-2016-0588, SEV-2016-0597, and MDM-2015-0509, some of which include ERDF funds from the European Union. IFAE is partially funded by the CERCA program of the Generalitat de Catalunya. Research leading to these results has received funding from the European Research Council under the European Union’s Seventh Framework Program (FP7/2007-2013) including ERC grant agreements 240672, 291329, and 306478. We acknowledge support from the Brazilian Instituto Nacional de Ciência e Tecnologia (INCT) do e-Universo (CNPq grant no. 465376/2014-2). This manuscript has been authored by Fermi Research Alliance, LLC under Contract No. DE-AC02-07CH11359 with the U.S. Department of Energy, Office of Science, Office of High Energy Physics. Funding for SDSS-III has been provided by the Alfred P. Sloan Foundation, the Participating Institutions, the National Science Foundation, and the U.S. Department of Energy Office of Science.
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- 2021
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94. Dark Energy Survey Year 3 results: Curved-sky weak lensing mass map reconstruction
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Sunayana Bhargava, Jennifer L. Marshall, David J. Brooks, Carlos Solans Sanchez, G. Tarle, Samuel Hinton, G. Gutierrez, Alexandra Amon, Peter Doel, Ami Choi, Ben Hoyle, Marco Raveri, B. Flaugher, F. Andrade-Oliveira, Jochen Weller, R. P. Rollins, H. T. Diehl, D. L. Burke, Felipe Menanteau, Alex Drlica-Wagner, J. DeRose, F. J. Castander, David Bacon, E. Suchyta, Dragan Huterer, Christopher J. Conselice, Brian Yanny, Jack Elvin-Poole, U. Demirbozan, Maria E. S. Pereira, Niall MacCrann, Keith Bechtol, Erin Sheldon, Martin Crocce, V. Scarpine, T. M. C. Abbott, Peter Melchior, D. L. Hollowood, S. Serrano, Agnès Ferté, J. De Vicente, J. Cordero, P. F. Leget, A. Campos, Eli S. Rykoff, C. Doux, Chun-Hao To, E. J. Sanchez, K. Herner, F. Paz-Chinchón, J. Carretero, Antonella Palmese, Marcos Lima, J. Myles, I. Harrison, G. Pollina, A. Roodman, David J. James, Tommaso Giannantonio, D. Zeurcher, M. A. G. Maia, M. Rodriguez-Monroy, Joe Zuntz, A. Alarcon, B. Yin, S. Allam, Robert A. Gruendl, A. Kovács, Matthew R. Becker, Pablo Fosalba, B. Mawdsley, Ashley J. Ross, S. Pandey, J. Muir, Joseph J. Mohr, Michael Troxel, I. Ferrero, Matt J. Jarvis, A. Carnero Rosell, J. McCullough, P. Vielzeuf, Yanxi Zhang, Seshadri Nadathur, M. Carrasco Kind, M. March, S. Everett, M. Smith, M. Costanzi, Jean-Luc Starck, Daniel Gruen, I. Tutusaus, Francois Lanusse, Chihway Chang, Daniel Thomas, J. Prat, L. Whiteway, F. Elsner, S. Desai, I. Sevilla-Noarbe, M. Soares-Santos, G. Giannini, W. G. Hartley, D. W. Gerdes, R. Cawthon, N. Kuropatkin, Ramon Miquel, K. D. Eckert, T. N. Varga, L. N. da Costa, J. P. Dietrich, Juan Garcia-Bellido, E. Bertin, E. M. Huff, R. Chen, Michel Aguena, Enrique Gaztanaga, R. L. C. Ogando, Bhuvnesh Jain, M Gatti, Ofer Lahav, Niall Jeffrey, Robert Morgan, L. F. Secco, Nico Hamaus, A. A. Plazas, A. Navarro-Alsina, T. Shin, T. Kacprzak, C. Davis, J. Gschwend, Gary Bernstein, National Science Foundation (US), Ministerio de Ciencia, Innovación y Universidades (España), Ministerio de Economía y Competitividad (España), Generalitat de Catalunya, European Commission, Instituto Nacional de Ciência e Tecnologia (Brasil), University of Portsmouth, Laboratoire de physique de l'ENS - ENS Paris (LPENS), Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Cité (UPCité)-Département de Physique de l'ENS-PSL, École normale supérieure - Paris (ENS-PSL), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-École normale supérieure - Paris (ENS-PSL), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL), Astrophysique Interprétation Modélisation (AIM (UMR7158 / UMR_E_9005 / UM_112)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Institut national des sciences de l'Univers (INSU - CNRS)-Université Paris Diderot - Paris 7 (UPD7)-Centre National de la Recherche Scientifique (CNRS), Institut d'Astrophysique de Paris (IAP), Institut national des sciences de l'Univers (INSU - CNRS)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), DES, Laboratoire de physique de l'ENS - ENS Paris (LPENS (UMR_8023)), École normale supérieure - Paris (ENS Paris), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Université de Paris (UP), Astrophysique Interprétation Modélisation (AIM (UMR_7158 / UMR_E_9005 / UM_112)), Centre National de la Recherche Scientifique (CNRS)-Institut national des sciences de l'Univers (INSU - CNRS)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris Diderot - Paris 7 (UPD7), Jeffrey, N., Gatti, M., Chang, C., Whiteway, L., Demirbozan, U., Kovacs, A., Pollina, G., Bacon, D., Hamaus, N., Kacprzak, T., Lahav, O., Lanusse, F., Mawdsley, B., Nadathur, S., Starck, J. L., Vielzeuf, P., Zeurcher, D., Alarcon, A., Amon, A., Bechtol, K., Bernstein, G. M., Campos, A., Rosell, A. C., Kind, M. C., Cawthon, R., Chen, R., Choi, A., Cordero, J., Davis, C., Derose, J., Doux, C., Drlica-Wagner, A., Eckert, K., Elsner, F., Elvin-Poole, J., Everett, S., Ferte, A., Giannini, G., Gruen, D., Gruendl, R. A., Harrison, I., Hartley, W. G., Herner, K., Huff, E. M., Huterer, D., Kuropatkin, N., Jarvis, M., Leget, P. F., Maccrann, N., Mccullough, J., Muir, J., Myles, J., Navarro-Alsina, A., Pandey, S., Prat, J., Raveri, M., Rollins, R. P., Ross, A. J., Rykoff, E. S., Sanchez, C., Secco, L. F., Sevilla-Noarbe, I., Sheldon, E., Shin, T., Troxel, M. A., Tutusaus, I., Varga, T. N., Yanny, B., Yin, B., Zhang, Y., Zuntz, J., Abbott, T. M. C., Aguena, M., Allam, S., Andrade-Oliveira, F., Becker, M. R., Bertin, E., Bhargava, S., Brooks, D., Burke, D. L., Carretero, J., Castander, F. J., Conselice, C., Costanzi, M., Crocce, M., Da Costa, L. N., Pereira, M. E. S., De Vicente, J., Desai, S., Diehl, H. T., Dietrich, J. P., Doel, P., Ferrero, I., Flaugher, B., Fosalba, P., Garcia-Bellido, J., Gaztanaga, E., Gerdes, D. W., Giannantonio, T., Gschwend, J., Gutierrez, G., Hinton, S. R., Hollowood, D. L., Hoyle, B., Jain, B., James, D. J., Lima, M., Maia, M. A. G., March, M., Marshall, J. L., Melchior, P., Menanteau, F., Miquel, R., Mohr, J. J., Morgan, R., Ogando, R. L. C., Palmese, A., Paz-Chinchon, F., Plazas, A. A., Rodriguez-Monroy, M., Roodman, A., Sanchez, E., Scarpine, V., Serrano, S., Smith, M., Soares-Santos, M., Suchyta, E., Tarle, G., Thomas, D., To, C., Weller, J., Université de Paris, University College London, Barcelona Institute of Science and Technology, University of Pennsylvania, University of Chicago, Calle Viá Láctea, Universidad de La Laguna (ULL), Ludwig-Maximilians Universität München, ETH Zurich, Argonne National Laboratory, Stanford University, University of Wisconsin-Madison, CarnegieMellon University, Instituto de Astrofisica de Canarias, Laboratorio Interinstitucional de e-Astronomia-LIneA, Dpto. Astrofisica, National Center for Supercomputing Applications, University of Illinois at Urbana-Champaign, Duke University, Ohio State University, University of Manchester, University of California,Berkeley, Santa Cruz Institute for Particle Physics, Fermi National Accelerator Laboratory, California Institute of Technology, SLAC National Accelerator Laboratory, Denys Wilkinson Building, University of Geneva, University of Michigan, University of Cambridge, Universidade Estadual de Campinas (UNICAMP), Medioambientales y Tecnologicas (CIEMAT), Brookhaven National Laboratory, Institut d'Estudis Espacials de Catalunya (IEEC), CSIC), Max Planck Institute for Extraterrestrial Physics, University of Edinburgh, NSF's National Optical-Infrared Astronomy Research Laboratory, Universidade de Saõ Paul, Universidade Estadual Paulista (UNESP), Institut d'Astrophysique deParis, Institut d'Astrophysique de Paris, University of Sussex, School of Physics and Astronomy, University of Trieste, INAF-Osservatorio Astronomico di Trieste, Institute for Fundamental Physics of the Universe, Observatório Nacional, IIT Hyderabad, Ludwig-Maximilians-Universitat, University of Oslo, Universidad Autonoma de Madrid, University of Queensland, Center for Astrophysics | Harvard and Smithsonian, Texas A and M University, Princeton University, Institucio Catalana de Recerca i Estudis Avancats, University of Southampton, Oak Ridge National Laboratory, and Centre National de la Recherche Scientifique (CNRS)-Université de Paris (UP)-Sorbonne Université (SU)-École normale supérieure - Paris (ENS Paris)
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statistical [Methods] ,Cosmology and Nongalactic Astrophysics (astro-ph.CO) ,media_common.quotation_subject ,Dark matter ,FOS: Physical sciences ,Astrophysics ,Astrophysics::Cosmology and Extragalactic Astrophysics ,7. Clean energy ,01 natural sciences ,Gravitational lensing: weak ,0103 physical sciences ,Prior probability ,Maximum a posteriori estimation ,010303 astronomy & astrophysics ,STFC ,Weak gravitational lensing ,Methods: statistical ,media_common ,Physics ,ST/M001334/1 ,010308 nuclear & particles physics ,RCUK ,Astronomy and Astrophysics ,Celestial sphere ,gravitational lensing: Weak ,large-scale structure of Universe ,methods: Statistical ,ST/R000476/1 ,Galaxy ,Space and Planetary Science ,Sky ,astro-ph.CO ,Dark energy ,[PHYS.ASTR]Physics [physics]/Astrophysics [astro-ph] ,weak [Gravitational lensing] ,Astrophysics - Cosmology and Nongalactic Astrophysics - Abstract
Jeffrey, N., et al. DES Collaboration, We present reconstructed convergence maps, mass maps, from the Dark Energy Survey (DES) third year (Y3) weak gravitational lensing data set. The mass maps are weighted projections of the density field (primarily dark matter) in the foreground of the observed galaxies. We use four reconstruction methods, each is a maximum a posteriori estimate with a different model for the prior probability of the map: Kaiser–Squires, null B-mode prior, Gaussian prior, and a sparsity prior. All methods are implemented on the celestial sphere to accommodate the large sky coverage of the DES Y3 data. We compare the methods using realistic ΛCDM simulations with mock data that are closely matched to the DES Y3 data. We quantify the performance of the methods at the map level and then apply the reconstruction methods to the DES Y3 data, performing tests for systematic error effects. The maps are compared with optical foreground cosmic-web structures and are used to evaluate the lensing signal from cosmic-void profiles. The recovered dark matter map covers the largest sky fraction of any galaxy weak lensing map to date., The DES data management system is supported by the National Science Foundation under Grant Numbers AST-1138766 and AST-1536171. The DES participants from Spanish institutions are partially supported by MICINN under grants ESP2017-89838, PGC2018-094773, PGC2018-102021, SEV-2016-0588, SEV-2016-0597, and MDM-2015-0509, some of which include ERDF funds from the European Union. IFAE is partially funded by the CERCA program of the Generalitat de Catalunya. Research leading to these results has received funding from the European Research Council under the European Union’s Seventh Framework Program (FP7/2007-2013) including ERC grant agreements 240672, 291329, and 306478. We acknowledge support from the Brazilian Instituto Nacional de Ciência e Tecnologia (INCT) do e-Universo (CNPq grant 465376/2014-2). This paper has been authored by Fermi Research Alliance, LLC under Contract No. DE-AC02-07CH11359 with the U.S. Department of Energy, Office of Science, Office of High Energy Physics. NJ has been supported by funding from l’Ecole Normale Supérieure, Paris. OL and NJ acknowledge support from a European Research Council Advanced Grant TESTDE (FP7/291329) and STFC Consolidated Grants ST/M001334/1 and ST/R000476/1. AK has been supported by a Juan de la Cierva fellowship from MINECO with project number IJC2018-037730-I, and funding for this project was also available in part through SEV-2015-0548 and AYA2017-89891-P. Cosmic voids computational work has been performed on the UK SCIAMA High Performance Computing cluster supported by the ICG, SEPNet, and the University of Portsmouth.
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- 2021
95. Lensing Without Borders. I. A Blind Comparison of the Amplitude of Galaxy-Galaxy Lensing Between Independent Imaging Surveys
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A Leauthaud, A Amon, S Singh, D Gruen, J U Lange, S Huang, N C Robertson, T N Varga, Y Luo, C Heymans, H Hildebrandt, C Blake, M Aguena, S Allam, F Andrade-Oliveira, J Annis, E Bertin, S Bhargava, J Blazek, S L Bridle, D Brooks, D L Burke, A Carnero Rosell, M Carrasco Kind, J Carretero, F J Castander, R Cawthon, A Choi, M Costanzi, L N da Costa, M E S Pereira, C Davis, J De Vicente, J DeRose, H T Diehl, J P Dietrich, P Doel, K Eckert, S Everett, A E Evrard, I Ferrero, B Flaugher, P Fosalba, J García-Bellido, M Gatti, E Gaztanaga, R A Gruendl, J Gschwend, W G Hartley, D L Hollowood, K Honscheid, B Jain, D J James, M Jarvis, B Joachimi, A Kannawadi, A G Kim, E Krause, K Kuehn, K Kuijken, N Kuropatkin, M Lima, N MacCrann, M A G Maia, M Makler, M March, J L Marshall, P Melchior, F Menanteau, R Miquel, H Miyatake, J J Mohr, B Moraes, S More, M Surhud, R Morgan, J Myles, R L C Ogando, A Palmese, F Paz-Chinchón, A A Plazas Malagón, J Prat, M M Rau, J Rhodes, M Rodriguez-Monroy, A Roodman, A J Ross, S Samuroff, C Sánchez, E Sanchez, V Scarpine, D J Schlegel, M Schubnell, S Serrano, I Sevilla-Noarbe, C Sifón, M Smith, J S Speagle, E Suchyta, G Tarle, D Thomas, J Tinker, C To, M A Troxel, L Van Waerbeke, P Vielzeuf, A H Wright, Santa Cruz, Stanford University, Carnegie Mellon University, Berkeley, Ludwig-Maximilians Universität München, Princeton University, University of Cambridge, Max Planck Institute for Extraterrestrial Physics, Royal Observatory, German Centre for Cosmolo gical Lensing, Swinburne University of Technology, Laboratoire d'Annecy De Physique Des Particules (LAPP), Laboratório Interinstitucional de e-Astronomia LIneA, Fermi National Accelerator Laboratory, Universidade Estadual Paulista (UNESP), Institut d'Astrophysique de Paris, CNRS, Northeastern University, Observatoire de Sauverny, University of Manchester, University College London, SLAC National Accelerator Laboratory, Instituto de Astrofisica de Canarias, Dpto. Astrofísica, National Center for Supercomputing Applications, University of Illinois at Urbana-Champaign, The Barcelona Institute of Science and Technology, Institut d'Estudis Espacials de Catalunya (IEEC), CSIC), University of Wisconsin Madison, The Ohio State University, University of Trieste, INAF-Osservatorio Astronomico di Trieste, Institute for Fundamental Physics of the Universe, Observatório Nacional, Univer sität Hamburg, Medioambientales y Tecnológicas (CIEMAT), Lawrence Berkeley National Laboratory, Santa Cruz Institute for Particle Physics, Ludwig-Maximilians-Universität, University of Pennsylvania, University of Michigan, University of Oslo, Universidad Autonoma de Madrid, University of Geneva, ASTRAVEO LLC, University of Arizona, Macquarie University, Lowell Observatory, Leiden University, Universidade de São Paulo (USP), ECyT UNSAM, Centro Brasileiro de Pesquisas Físicas, Texas A&M University, Institució Catalana de Recerca i Estudis Avancats, Nagoya University, University of Tokyo, Universidade Federal do Rio de Janeiro (UFRJ), The Inter-University Centre for Astronomy and Astrophysics, University of Chicago, University of British Columbia, California Institute of Technology, Pontificia Universidad Católica de Valparaíso, University of Southampton, University of Toronto, Oak Ridge National Laboratory, University of Portsmouth, New York University, Duke University, Leauthaud, A, Amon, A, Singh, S, Gruen, D, Lange, J U, Huang, S, Robertson, N C, Varga, T N, Luo, Y, Heymans, C, Hildebrandt, H, Blake, C, Aguena, M, Allam, S, Andrade-Oliveira, F, Annis, J, Bertin, E, Bhargava, S, Blazek, J, Bridle, S L, Brooks, D, Burke, D L, Rosell, A Carnero, Kind, M Carrasco, Carretero, J, Castander, F J, Cawthon, R, Choi, A, Costanzi, M, da Costa, L N, Pereira, M E S, Davis, C, De Vicente, J, Derose, J, Diehl, H T, Dietrich, J P, Doel, P, Eckert, K, Everett, S, Evrard, A E, Ferrero, I, Flaugher, B, Fosalba, P, García-Bellido, J, Gatti, M, Gaztanaga, E, Gruendl, R A, Gschwend, J, Hartley, W G, Hollowood, D L, Honscheid, K, Jain, B, James, D J, Jarvis, M, Joachimi, B, Kannawadi, A, Kim, A G, Krause, E, Kuehn, K, Kuijken, K, Kuropatkin, N, Lima, M, Maccrann, N, Maia, M A G, Makler, M, March, M, Marshall, J L, Melchior, P, Menanteau, F, Miquel, R, Miyatake, H, Mohr, J J, Moraes, B, More, S, Surhud, M, Morgan, R, Myles, J, Ogando, R L C, Palmese, A, Paz-Chinchón, F, Malagón, A A Plaza, Prat, J, Rau, M M, Rhodes, J, Rodriguez-Monroy, M, Roodman, A, Ross, A J, Samuroff, S, Sánchez, C, Sanchez, E, Scarpine, V, Schlegel, D J, Schubnell, M, Serrano, S, Sevilla-Noarbe, I, Sifón, C, Smith, M, Speagle, J S, Suchyta, E, Tarle, G, Thomas, D, Tinker, J, To, C, Troxel, M A, Van Waerbeke, L, Vielzeuf, P, Wright, A H, UAM. Departamento de Física Teórica, National Science Foundation (US), Department of Energy (US), European Commission, European Research Council, Ministerio de Educación y Ciencia (España), Agencia Estatal de Investigación (España), Ministerio de Ciencia, Innovación y Universidades (España), Ministerio de Economía y Competitividad (España), Generalitat de Catalunya, Laboratoire d'Annecy de Physique des Particules (LAPP), Institut National de Physique Nucléaire et de Physique des Particules du CNRS (IN2P3)-Université Savoie Mont Blanc (USMB [Université de Savoie] [Université de Chambéry])-Centre National de la Recherche Scientifique (CNRS), Institut d'Astrophysique de Paris (IAP), Institut national des sciences de l'Univers (INSU - CNRS)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), Institut de Recherches sur les lois Fondamentales de l'Univers (IRFU), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay, and DES
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photometric redshifts ,Cosmology and Nongalactic Astrophysics (astro-ph.CO) ,gravitational lensing ,FOS: Physical sciences ,Astrophysics::Cosmology and Extragalactic Astrophysics ,Astrophysics ,bonn deep survey ,1st data ,redshift distributions ,shear calibration ,Astrophysics::Galaxy Astrophysics ,Observations ,data release ,Física ,Astronomy and Astrophysics ,observations [cosmology] ,Cosmology ,Space and Planetary Science ,cosmology: observations ,cosmological constraints ,cross-correlations ,digital sky survey ,iii. application ,large-scale structure of Universe ,[PHYS.ASTR]Physics [physics]/Astrophysics [astro-ph] ,Cosmology and Nongalactic Astrophysics ,observation [cosmology] ,Astrophysics - Cosmology and Nongalactic Astrophysics - Abstract
A. Leauthaud et al., Lensing without borders is a cross-survey collaboration created to assess the consistency of galaxy–galaxy lensing signals (ΔΣ) across different data sets and to carry out end-to-end tests of systematic errors. We perform a blind comparison of the amplitude of ΔΣ using lens samples from BOSS and six independent lensing surveys. We find good agreement between empirically estimated and reported systematic errors which agree to better than 2.3σ in four lens bins and three radial ranges. For lenses with zL > 0.43 and considering statistical errors, we detect a 3–4σ correlation between lensing amplitude and survey depth. This correlation could arise from the increasing impact at higher redshift of unrecognized galaxy blends on shear calibration and imperfections in photometric redshift calibration. At zL > 0.54, amplitudes may additionally correlate with foreground stellar density. The amplitude of these trends is within survey-defined systematic error budgets that are designed to include known shear and redshift calibration uncertainty. Using a fully empirical and conservative method, we do not find evidence for large unknown systematics. Systematic errors greater than 15 per cent (25 per cent) ruled out in three lens bins at 68 per cent (95 per cent) confidence at z < 0.54. Differences with respect to predictions based on clustering are observed to be at the 20–30 per cent level. Our results therefore suggest that lensing systematics alone are unlikely to fully explain the ‘lensing is low’ effect at z < 0.54. This analysis demonstrates the power of cross-survey comparisons and provides a promising path for identifying and reducing systematics in future lensing analyses., We acknowledge use of the lux supercomputer at UC Santa Cruz, funded by NSF MRI grant AST 1828315. This material is based on work supported by the U.D Department of Energy, Office of Science, Office of High Energy Physics under Award Number DE-SC0019301. AL acknowledges support from the David and Lucille Packard foundation, and from the Alfred.P Sloan foundation. CH acknowledges support from the European Research Council under grant number 647112, and support from the Max Planck Society and the Alexander von Humboldt Foundation in the framework of the Max Planck-Humboldt Research Award endowed by the Federal Ministry of Education and Research. KK acknowledges support from the Royal Society and Imperial College. HH is supported by a Heisenberg grant of the Deutsche Forschungsgemeinschaft (Hi 1495/5-1), as well as an ERC Consolidator Grant (no. 770935). AHW is supported by an European Research Council Consolidator Grant (no. 770935). Funding for the DES Projects has been provided by the U.S. Department of Energy; the U.S. National Science Foundation; the Ministry of Science and Education of Spain; the Science and Technology Facilities Council of the United Kingdom; the Higher Education Funding Council for England; the National Center for Supercomputing Applications at the University of Illinois at Urbana-Champaign; the Kavli Institute of Cosmological Physics at the University of Chicago; the Center for Cosmology and Astro-Particle Physics at the Ohio State University; the Mitchell Institute for Fundamental Physics and Astronomy at Texas A&M University; Financiadora de Estudos e Projetos; Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de Janeiro; Conselho Nacional de Desenvolvimento Científico e Tecnológico and the Ministério da Ciência; Tecnologia e Inovação; the Deutsche Forschungsgemeinschaft; and the Collaborating Institutions in the Dark Energy Survey. The Collaborating Institutions are Argonne National Laboratory; the University of California at Santa Cruz; the University of Cambridge; Centro de Investigaciones Energéticas; Medioambientales y Tecnológicas-Madrid; the University of Chicago; University College London; the DES-Brazil Consortium; the University of Edinburgh; the Eidgenössische Technische Hochschule (ETH) Zürich; Fermi National Accelerator Laboratory; the University of Illinois at Urbana-Champaign; the Institut de Ciències de l’Espai (IEEC/CSIC); the Institut de Física d’Altes Energies; Lawrence Berkeley National Laboratory; the Ludwig-Maximilians Universität München and the associated Excellence Cluster Universe; the University of Michigan; NFS’s NOIRLab; the University of Nottingham; The Ohio State University; the University of Pennsylvania; the University of Portsmouth; SLAC National Accelerator Laboratory; Stanford University; the University of Sussex; Texas A&M University; and the OzDES Membership Consortium. Based in part on observations at Cerro Tololo Inter-American Observatory at NSF’s NOIRLab (NOIRLab Prop. ID 2012B-0001; PI: J. Frieman), which is managed by the Association of Universities for Research in Astronomy (AURA) under a cooperative agreement with the National Science Foundation. The DES data management system is supported by the National Science Foundation under grant numbers AST-1138766 and AST-1536171. The DES participants from Spanish institutions are partially supported by MICINN under grants ESP2017-89838, PGC2018-094773, PGC2018-102021, SEV-2016-0588, SEV-2016-0597, and MDM-2015-0509, some of which include ERDF funds from the European Union. IFAE is partially funded by the CERCA program of the Generalitat de Catalunya. Research leading to these results has received funding from the European Research Council under the European Union’s Seventh Framework Program (FP7/2007-2013) including ERC grant agreements 240672, 291329, and 306478. We acknowledge support from the Brazilian Instituto Nacional de Ciência e Tecnologia (INCT) do e-Universo (CNPq grant 465376/2014-2). This manuscript has been authored by Fermi Research Alliance, LLC under Contract No. DE-AC02-07CH11359 with the U.S. Department of Energy, Office of Science, Office of High Energy Physics. The Hyper Suprime-Cam (HSC) collaboration includes the astronomical communities of Japan and Taiwan, and Princeton University. The HSC instrumentation and software were developed by the National Astronomical Observatory of Japan (NAOJ), the Kavli Institute for the Physics and Mathematics of the Universe (Kavli IPMU), the University of Tokyo, the High Energy Accelerator Research Organisation (KEK), the Academia Sinica Institute for Astronomy and Astrophysics in Taiwan (ASIAA), and Princeton University. Funding was contributed by the FIRST program from the Japanese Cabinet Office, the Ministry of Education, Culture, Sports, Science, and Technology (MEXT), the Japan Society for the Promotion of Science (JSPS), Japan Science and Technology Agency (JST), the Toray Science Foundation, NAOJ, Kavli IPMU, KEK, ASIAA, and Princeton University. This paper makes use of software developed for the Large Synoptic Survey Telescope. We thank the LSST Project for making their code available as free software at http://dm.lsst.org This paper is based [in part] on data collected at the Subaru Telescope and retrieved from the HSC data archive system, which is operated by Subaru Telescope and Astronomy Data Center (ADC) at NAOJ. Data analysis was in part carried out with the cooperation of Center for Computational Astrophysics (CfCA), NAOJ. The Pan-STARRS1 Surveys (PS1) and the PS1 public science archive have been made possible through contributions by the Institute for Astronomy, the University of Hawaii, the Pan-STARRS Project Office, the Max Planck Society and its participating institutes, the Max Planck Institute for Astronomy, Heidelberg, and the Max Planck Institute for Extraterrestrial Physics, Garching, The Johns Hopkins University, Durham University, the University of Edinburgh, the Queen’s University Belfast, the Harvard-Smithsonian Center for Astrophysics, the Las Cumbres Observatory Global Telescope Network Incorporated, the National Central University of Taiwan, the Space Telescope Science Institute, the National Aeronautics and Space Administration under grant No. NNX08AR22G issued through the Planetary Science Division of the NASA Science Mission Directorate, the National Science Foundation grant no. AST-1238877, the University of Maryland, Eotvos Lorand University (ELTE), the Los Alamos National Laboratory, and the Gordon and Betty Moore Foundation. Based on observations made with ESO Telescopes at the La Silla Paranal Observatory under programme IDs 177.A-3016, 177.A-3017, 177.A-3018, and 179.A-2004, and on data products produced by the KiDS consortium. The KiDS production team acknowledges support from: Deutsche Forschungsgemeinschaft, ERC, NOVA, and NWO-M grants; Target; the University of Padova, and the University Federico II (Naples). This work was supported by the Department of Energy, Laboratory Directed Research and Development program at SLAC National Accelerator Laboratory, under contract DE-AC02-76SF00515 and as a part of the Panofsky Fellowship awarded to DG. MM is partially funded by FAPERJ, CNPq, and CONICET. BM acknowledges support from the Brazilian funding agency FAPERJ.
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- 2021
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96. Natural genetic variation alters Alzheimer’s‐related gene expression modules in mice
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Gregory W. Carter, Michael A. Langston, Narayanan Raghupathy, Gary A. Churchill, Charles A. Phillips, Raymond F. Robledo, Matthew A. Hibbs, Daniel M. Gatti, Joel H. Graber, Troy Wilcox, Elissa J. Chesler, Ann E. Wells, Steven C. Munger, and Juliet Ndukum
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Genetics ,Psychiatry and Mental health ,Cellular and Molecular Neuroscience ,Developmental Neuroscience ,Expression (architecture) ,Epidemiology ,Health Policy ,Genetic variation ,Neurology (clinical) ,Geriatrics and Gerontology ,Related gene ,Biology - Published
- 2020
97. Genotype-free individual genome reconstruction of Multiparental Population Models by RNA sequencing data
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Gary A. Churchill, Narayanan Raghupathy, Elissa J. Chesler, Hao He, Daniel M. Gatti, Kwangbom Choi, Vivek M. Philip, Isabela Gerdes Gyuricza, and Steven C. Munger
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Gene expression profiling ,Regulation of gene expression ,Candidate gene ,Strain (biology) ,Haplotype ,Expression quantitative trait loci ,Computational biology ,Biology ,Genotyping ,Genome - Abstract
Multi-parent populations (MPPs), genetically segregating model systems derived from two or more inbred founder strains, are widely used in biomedical and agricultural research. Gene expression profiling by direct RNA sequencing (RNA-Seq) is commonly applied to MPPs to investigate gene expression regulation and to identify candidate genes. In genetically diverse populations, including most MPPs, quantification of gene expression is improved when the RNA-Seq reads are aligned to individualized transcriptomes that incorporate known polymorphic loci. However, the process of constructing and analyzing individual genomes can be computationally demanding and error prone. We propose a new approach, genome reconstruction by RNA-Seq (GBRS), that relies on simultaneous alignment of RNA-Seq reads to the founder strain transcriptomes. GBRS can reconstruct the diploid genome of each individual and quantify both total and allele-specific gene expression. We demonstrate that GBRS performs as well as methods that rely on high-density genotyping arrays to reconstruct the founder haplotype mosaic of MPP individuals. Using GBRS in addition to other genotyping methods provides quality control for detecting sample mix-ups and improves power to detect expression quantitative trait loci.GBRSsoftware is freely available athttps://github.com/churchill-lab/gbrs.
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- 2020
98. Targeted microwaves ablation of prostate cancer with 3D MRI/US fusion imaging (NCT04627896)
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M. Oderda, G. Calleris, R. Faletti, M. Gatti, A. Greco, A. Marquis, A. Zitella, and P. Gontero
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Urology - Published
- 2022
99. Life safety applied in full face excavation
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P. Lunardi, M. Gatti, G. Cassani, A. Bellocchio, and C. L. Zenti
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Engineering ,business.industry ,Forensic engineering ,Face (sociological concept) ,Excavation ,business - Published
- 2020
100. Resilient city: The case of Bisagno diversion tunnel
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M. Gatti, C. L. Zenti, G. Lunardi, B. Spigarelli, and G. Cassani
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Environmental science - Published
- 2020
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