2,432 results on '"Loke, P."'
Search Results
52. Virtual Planning and Patient-Specific Graft Design for Aortic Repairs
- Author
-
Aslan, Seda, Liu, Xiaolong, Wu, Qiyuan, Mass, Paige, Loke, Yue-Hin, Johnson, Jed, Huddle, Joey, Olivieri, Laura, Hibino, Narutoshi, and Krieger, Axel
- Published
- 2024
- Full Text
- View/download PDF
53. Effect of coupling dewaxing and chemical pretreatment on valorization of waxy fruit wastes
- Author
-
Cheenkachorn, Kraipat, Panakkal, Elizabeth Jayex, Chatkaew, Chaichana, Chuetor, Santi, Show, Pau-Loke, El Bari, Hassan, Venkatachalam, Ponnusami, and Sriariyanun, Malinee
- Published
- 2024
- Full Text
- View/download PDF
54. Advancement of Carotenogenesis of Astaxanthin from Haematococcus pluvialis: Recent Insight and Way Forward
- Author
-
Wilawan, Busakorn, Chan, Sook Sin, Ling, Tau Chuan, Show, Pau Loke, Ng, Eng-Poh, Jonglertjunya, Woranart, Phadungbut, Poomiwat, and Khoo, Kuan Shiong
- Published
- 2024
- Full Text
- View/download PDF
55. Valorization of Salmo salar Skin Waste for the Synthesis of Angiotensin Converting Enzyme-1 (ACE1) Inhibitory Peptides
- Author
-
Munawaroh, Heli Siti Halimatul, Gumilar, Gun Gun, Khoiriah, Selmi Fiqhi, Nindya, Faradhina Salfa, Berliana, Nur’aini, Aisyah, Siti, Nuraini, Vidia Afina, Ningrum, Andriati, Susanto, Eko, Martha, Larasati, Kurniawan, Isman, Hidayati, Nur Akmalia, Chew, Kit Wayne, and Show, Pau-Loke
- Published
- 2024
- Full Text
- View/download PDF
56. Deakin RF-Sensing: Experiments on Correlated Knowledge Distillation for Monitoring Human Postures with Radios
- Author
-
Pokhrel, Shiva Raj, Kua, Jonathan, Satish, Deol, Williams, Philip, Zaslavsky, Arkady, Loke, Seng W., and Choi, Jinho
- Subjects
Computer Science - Computer Vision and Pattern Recognition ,Electrical Engineering and Systems Science - Signal Processing - Abstract
In this work, we propose and develop a simple experimental testbed to study the feasibility of a novel idea by coupling radio frequency (RF) sensing technology with Correlated Knowledge Distillation (CKD) theory towards designing lightweight, near real-time and precise human pose monitoring systems. The proposed CKD framework transfers and fuses pose knowledge from a robust "Teacher" model to a parameterized "Student" model, which can be a promising technique for obtaining accurate yet lightweight pose estimates. To assure its efficacy, we implemented CKD for distilling logits in our integrated Software Defined Radio (SDR)-based experimental setup and investigated the RF-visual signal correlation. Our CKD-RF sensing technique is characterized by two modes - a camera-fed Teacher Class Network (e.g., images, videos) with an SDR-fed Student Class Network (e.g., RF signals). Specifically, our CKD model trains a dual multi-branch teacher and student network by distilling and fusing knowledge bases. The resulting CKD models are then subsequently used to identify the multimodal correlation and teach the student branch in reverse. Instead of simply aggregating their learnings, CKD training comprised multiple parallel transformations with the two domains, i.e., visual images and RF signals. Once trained, our CKD model can efficiently preserve privacy and utilize the multimodal correlated logits from the two different neural networks for estimating poses without using visual signals/video frames (by using only the RF signals).
- Published
- 2023
57. A Cauchy--Harish-Chandra integral for a dual pair over a p-adic field, the definition and a conjecture
- Author
-
Loke, Hung Yean and Przebinda, Tomasz
- Subjects
Mathematics - Representation Theory - Abstract
For a real irreducible dual pair there is an integral kernel operator which maps the distribution character of an irreducible admissible representation of the group with the smaller or equal rank to an invariant eigendistribution on the group with the larger or equal rank. The purpose of this article is to transfer this construction to the p-adic case. We provide the precise definition of the integral kernel operator and formulate a conjecture.
- Published
- 2023
58. Unfolding the Moving-In Experiences of International Students at a Malaysian Private Tertiary Institution
- Author
-
Syed Ahmad, Shariffah Bahyah Binti and Heng Loke, Siow
- Abstract
This paper focuses on the experience of international undergraduate students as they move into a university environment. Utilising a phenomenological approach with Schlossberg's Theory of Transition as the framework, data was collected through semi-structured interviews with 19 undergraduate students, all enrolled in one private university. The study found that their moving-in experiences were influenced by their aspirations, feelings and expectations. Conflicting emotions accompanied their departure from their home country: sorrow and anxiety versus excitement for their new life. Aided by a relatively smooth immigration process, the students moved on to experience memorable moments where friendships were formed and exploration of the surrounding areas was acculturated. Challenges faced include those of physical nature (weather and food), academic, and perhaps the most serious of which, psychosocial: in the form of homesickness and feeling of foreignness.
- Published
- 2022
59. The myelin water imaging transcriptome: myelin water fraction regionally varies with oligodendrocyte-specific gene expression
- Author
-
Jaimie J. Lee, Paulina S. Scheuren, Hanwen Liu, Ryan W. J. Loke, Cornelia Laule, Catrina M. Loucks, and John L.K. Kramer
- Subjects
Myelin ,Neuroimaging transcriptomics ,Transcriptome ,Myelin water fraction ,Myelin water imaging ,Gene expression ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Abstract Identifying sensitive and specific measures that can quantify myelin are instrumental in characterizing microstructural changes in neurological conditions. Neuroimaging transcriptomics is emerging as a valuable technique in this regard, offering insights into the molecular basis of promising candidates for myelin quantification, such as myelin water fraction (MWF). We aimed to demonstrate the utility of neuroimaging transcriptomics by validating MWF as a myelin measure. We utilized data from a normative MWF brain atlas, comprised of 50 healthy subjects (mean age = 25 years, range = 17–42 years) scanned at 3 Tesla. Magnetic resonance imaging data included myelin water imaging to extract MWF and T1 anatomical scans for image registration and segmentation. We investigated the inter-regional distributions of gene expression data from the Allen Human Brain Atlas in conjunction with inter-regional MWF distribution patterns. Pearson correlations were used to identify genes with expression profiles mirroring MWF. The Single Cell Type Atlas from the Human Protein Atlas was leveraged to classify genes into gene sets with high cell type specificity, and a control gene set with low cell type specificity. Then, we compared the Pearson correlation coefficients for each gene set to determine if cell type-specific gene expression signatures correlate with MWF. Pearson correlation coefficients between MWF and gene expression for oligodendrocytes and adipocytes were significantly higher than for the control gene set, whereas correlations between MWF and inhibitory/excitatory neurons were significantly lower. Our approach in integrating transcriptomics with neuroimaging measures supports an emerging technique for understanding and validating MRI-derived markers such as MWF.
- Published
- 2024
- Full Text
- View/download PDF
60. Impacts of bleaching on host sea anemones and associated anemonefish in Southeast Asian coral reefs
- Author
-
Taira, Daisuke, Ng, Chin Soon Lionel, Toh, Tai Chong, Afiq-Rosli, Lutfi, Sim, Wan Ting, and Chou, Loke Ming
- Published
- 2024
- Full Text
- View/download PDF
61. Correction: Development and validation of a circulating microRNA panel for the early detection of breast cancer
- Author
-
Zou, Ruiyang, Loke, Sau Yeen, Tang, Yew Chung, Too, Heng-Phon, Zhou, Lihan, Lee, Ann S. G., and Hartman, Mikael
- Published
- 2024
- Full Text
- View/download PDF
62. Glossophobia among Engineering Learners: A Case Study at a Technical University
- Author
-
Balakrishnan, Subatira, Abdullah, Norlisa Loke, and Khoo Mei Sui, Linda
- Abstract
Glossophobia or fear of public speaking is commonly experienced by tertiary learners during classroom presentations. This study intends to examine the speech anxiety level experienced by engineering learners and the relationship between the learners' English language proficiency and their speech anxiety. The study will also identify the causes of public speaking anxiety among these engineering learners. The samples were 65 Engineering Diploma students who responded to McCroskey's Personal Report of Public Speaking Anxiety (PRPSA) questionnaire. The students' English language grades at SPM level were used as the measurement of their English language proficiency. The findings showed the students' speech anxiety is at moderate level (M= 105.9) and there was a weak negative relationship between total PRPSA scores and SPM English language grades (r = -0.149, n = 65, p > 0.05). Mere thoughts of presenting a speech with undue worries of being asked questions were the causes of their speech anxiety. Therefore, it is proposed engineering learners be given ample public speaking trainings through planned programmes and engineering curriculum planners include elements of public speaking in engineering subjects. Public speaking skills will be an added value and increase engineering graduate employability in future.
- Published
- 2022
63. Context Query Simulation for Smart Carparking Scenarios in the Melbourne CDB
- Author
-
Weerasinghe, Shakthi, Zaslavsky, Arkaday, Hassani, Alireza, Loke, Seng W., Medvedev, Alexey, and Abken, Amin
- Subjects
Computer Science - Databases ,Computer Science - Software Engineering ,Electrical Engineering and Systems Science - Signal Processing ,D.0 - Abstract
The rapid growth in Internet of Things (IoT) has ushered in the way for better context-awareness enabling more smarter applications. Although for the growth in the number of IoT devices, Context Management Platforms (CMPs) that integrate different domains of IoT to produce context information lacks scalability to cater to a high volume of context queries. Research in scalability and adaptation in CMPs are of significant importance due to this reason. However, there is limited methods to benchmarks and validate research in this area due to the lack of sizable sets of context queries that could simulate real-world situations, scenarios, and scenes. Commercially collected context query logs are not publicly accessible and deploying IoT devices, and context consumers in the real-world at scale is expensive and consumes a significant effort and time. Therefore, there is a need to develop a method to reliably generate and simulate context query loads that resembles real-world scenarios to test CMPs for scale. In this paper, we propose a context query simulator for the context-aware smart car parking scenario in Melbourne Central Business District in Australia. We present the process of generating context queries using multiple real-world datasets and publicly accessible reports, followed by the context query execution process. The context query generator matches the popularity of places with the different profiles of commuters, preferences, and traffic variations to produce a dataset of context query templates containing 898,050 records. The simulator is executable over a seven-day profile which far exceeds the simulation time of any IoT system simulator. The context query generation process is also generic and context query language independent.
- Published
- 2023
64. Towards Human-Centred Crowd Computing: Software for Better Use of Computational Resources
- Author
-
Fernando, Niroshinie, Arora, Chetan, Loke, Seng W., Alam, Lubna, La Macchia, Stephen, and Graesser, Helen
- Subjects
Computer Science - Software Engineering - Abstract
Internet-connected smart devices are increasing at an exponential rate. These powerful devices have created a yet-untapped pool of idle resources that can be utilised, among others, for processing data in resource-depleted environments. The idea of bringing together a pool of smart devices for ``crowd computing'' (CC) has been studied in the recent past from an infrastructural feasibility perspective. However, for the CC paradigm to be successful, numerous socio-technical and software engineering (SE), specifically the requirements engineering (RE)-related factors are at play and have not been investigated in the literature. In this paper, we motivate the SE-related aspects of CC and the ideas for implementing mobile apps required for CC scenarios. We present the results of a preliminary study on understanding the human aspects, incentives that motivate users, and CC app requirements, and present our future development plan in this relatively new field of research for SE applications.
- Published
- 2023
65. A family of Spin(8) dual pairs: the case of real groups
- Author
-
Gan, Wee Teck, Loke, Hung Yean, Paul, Annegret, and Savin, Gordan
- Subjects
Mathematics - Representation Theory ,22E46 - Abstract
Exceptional groups of type $E_6$ contain dual pairs where one member is $\mathrm{Spin}(8)$, and the other is $T\rtimes \mathbb Z/2\mathbb Z$, where $T$ is a two-dimensional torus and the non-trivial element in $\mathbb Z/2\mathbb Z$ acts on $T$ by the inverse involution. We describe the correspondence of representations arising by restricting the minimal representation.
- Published
- 2023
66. Poisoning Attacks and Defenses in Federated Learning: A Survey
- Author
-
Sagar, Subhash, Li, Chang-Sun, Loke, Seng W., and Choi, Jinho
- Subjects
Computer Science - Cryptography and Security ,Computer Science - Machine Learning - Abstract
Federated learning (FL) enables the training of models among distributed clients without compromising the privacy of training datasets, while the invisibility of clients datasets and the training process poses a variety of security threats. This survey provides the taxonomy of poisoning attacks and experimental evaluation to discuss the need for robust FL.
- Published
- 2023
67. Reinforcement Learning Based Approaches to Adaptive Context Caching in Distributed Context Management Systems
- Author
-
Weerasinghe, Shakthi, Zaslavsky, Arkady, Loke, Seng W., Abken, Amin, and Hassani, Alireza
- Subjects
Electrical Engineering and Systems Science - Systems and Control ,Computer Science - Information Retrieval ,Computer Science - Machine Learning ,Computer Science - Performance ,H.3.2 ,H.3.3 ,H.3.4 ,C.4 - Abstract
Performance metrics-driven context caching has a profound impact on throughput and response time in distributed context management systems for real-time context queries. This paper proposes a reinforcement learning based approach to adaptively cache context with the objective of minimizing the cost incurred by context management systems in responding to context queries. Our novel algorithms enable context queries and sub-queries to reuse and repurpose cached context in an efficient manner. This approach is distinctive to traditional data caching approaches by three main features. First, we make selective context cache admissions using no prior knowledge of the context, or the context query load. Secondly, we develop and incorporate innovative heuristic models to calculate expected performance of caching an item when making the decisions. Thirdly, our strategy defines a time-aware continuous cache action space. We present two reinforcement learning agents, a value function estimating actor-critic agent and a policy search agent using deep deterministic policy gradient method. The paper also proposes adaptive policies such as eviction and cache memory scaling to complement our objective. Our method is evaluated using a synthetically generated load of context sub-queries and a synthetic data set inspired from real world data and query samples. We further investigate optimal adaptive caching configurations under different settings. This paper presents, compares, and discusses our findings that the proposed selective caching methods reach short- and long-term cost- and performance-efficiency. The paper demonstrates that the proposed methods outperform other modes of context management such as redirector mode, and database mode, and cache all policy by up to 60% in cost efficiency., Comment: This is a pre-print version of the journal paper submitted to ACM Transactions in Internet of Things, which is currently under review
- Published
- 2022
68. Fragile electronic superconductivity in Bi Single crystal
- Author
-
Kumar, Anil, Loke, Rajendra, Pramanik, Arindam, Sensarma, Rajdeep, Ramakrishnan, Sitaram, Prakash, Om, Bag, Biplab, Thamizhavel, Arumugam, and Ramakrishnan, Srinivasan
- Subjects
Condensed Matter - Superconductivity ,Quantum Physics - Abstract
It was presumed that semimetal Bismuth (Bi) would not show superconductivity (SC) even at ultra-low temperatures ($<$10 mK) due to its very low carrier density ($\approx 3\times10^{17}$cm$^{-3}$). Recently, we have established bulk superconductivity in ultra-pure (99.9999\%) Bi single crystal at $\mathrm{T_C = 0.53}$ mK with an extrapolated upper critical field $\mathrm{H_C(0) = 5.2\mu}$T measured along the [$0001$] (trigonal) -crystallographic direction. At very low concentrations of the charge carriers, we are dealing with fragile Cooper pairs with an estimated large coherence length $\mathrm{\xi_{GL}(0)\approx 96 \mu}$m. We also stated that one needs to go beyond the conventional electron-phonon coupling (BCS-like) mechanism to understand the SC state in Bi. Bi is a compensated semi-metal with electrons and holes as charge carriers. In order to find the charge carriers responsible for the SC, we report the temperature dependence of the anisotropic critical field along the [$01\bar 10$] (bisectrix)-crystallographic direction and compared it with the earlier data from measurements along the trigonal. Our theoretical analysis of the anisotropy of critical fields suggests that the light electrons in the three pockets of Bi bands are responsible for the SC and indicates that Bi is an extremely weak type-II (close to type-I) superconductor. Finally, we review the current theories proposed to explain the SC in Bi., Comment: 12 pages, 3 figures
- Published
- 2022
69. Longitudinal Assessment of T1 Mapping Trends Disease in Pediatric Patients With Heart Transplant
- Author
-
Nicolle M. Ceneri, Ravi Vegulla, Nicholas Mouzakis, Karin Hamann, Devika Richmann, Joshua Kanter, John Berger, Tacy Downing, Yue‐Hin Loke, Steven J. Staffa, David Zurakowski, Russell Cross, and Laura J. Olivieri
- Subjects
cardiac magnetic resonance ,heart transplant ,parametric mapping ,pediatrics ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 - Abstract
Background Surveillance for heart transplant rejection by endomyocardial biopsy is invasive and may yield false negatives. T1 and T2 mapping from cardiac magnetic resonance can demonstrate elevations with rejection. We sought to evaluate longitudinal changes in T1 and T2 mapping in pediatric patients with heart transplant. Methods and Results A cohort study was performed of pediatric patients with heart transplant who underwent concurrent endomyocardial biopsy and cardiac magnetic resonance with T1 and T2 mapping from December 2019 to July 2024. Segmental values were measured and subsegmental elevations (ie, hotspots) were identified. Subjects were categorized as either treated rejection or no rejection. Peak and mean T1 and T2 values and number of hotspots at/between each time point for patient dyads were compared between the groups. A total of 21 subjects (7 treated rejection, 14 no rejection) with 68 total encounters met inclusion criteria. Peak and mean T1 values were higher in treated rejection patients during the rejection period and decreased with treatment (peak, 1086 versus 1052; mean, 1028 versus 1021), such that at last follow‐up when their rejection had resolved, there was no significant difference in values when compared with no rejection patients (peak, 1066; mean, 1016). The number of T1 hotspots decreased after rejection treatment (2 versus 1). There were no changes in peak or mean T2 values in the treated rejection group despite treatment, and peak and mean T2 values were similar to patients with no rejection through last follow‐up. Conclusions Elevated T1 values and hotspots observed during cardiac allograft rejection decline in response to treatment. Cardiac magnetic resonance may serve as a noninvasive monitoring tool for the development and resolution of rejection, as well as the effectiveness of rejection therapy.
- Published
- 2024
- Full Text
- View/download PDF
70. Composition and temperature dependent remanent polarization and coercive field in wurtzite AlScN ferroelectric memory materials
- Author
-
J. C. Martinez, Subhranu Samanta, Chen Liu, Yao Zhu, and Desmond K. Loke
- Subjects
Physics ,QC1-999 - Abstract
We investigate the Sc dependence and thermal sensitivity of Al1−xScxN with the aid of Landau–Devonshire free energy recently proposed for its wurtzite ferroelectric phase. In particular, we calculate compositional and temperature dependences of the remanent polarization and the coercive field. Because the polarization is strong, surface fluctuations of the polarization are expected; we examine the nature of these fluctuations. Strong correlation is expected as the ferroelectric phase gives way to the paraelectric phase.
- Published
- 2024
- Full Text
- View/download PDF
71. Ability of Heart Rate Recovery and Gait Kinetics in a Single Wearable to Predict Frailty: Quasiexperimental Pilot Study
- Author
-
Reshma Aziz Merchant, Bernard Loke, and Yiong Huak Chan
- Subjects
Medicine - Abstract
BackgroundAging is a risk factor for falls, frailty, and disability. The utility of wearables to screen for physical performance and frailty at the population level is an emerging research area. To date, there is a limited number of devices that can measure frailty and physical performance simultaneously. ObjectiveThe aim of this study is to evaluate the accuracy and validity of a continuous digital monitoring wearable device incorporating gait mechanics and heart rate recovery measurements for detecting frailty, poor physical performance, and falls risk in older adults at risk of falls. MethodsThis is a substudy of 156 community-dwelling older adults ≥60 years old with falls or near falls in the past 12 months who were recruited for a fall prevention intervention study. Of the original participants, 22 participants agreed to wear wearables on their ankles. An interview questionnaire involving demographics, cognition, frailty (FRAIL), and physical function questions as well as the Falls Risk for Older People in the Community (FROP-Com) was administered. Physical performance comprised gait speed, timed up and go (TUG), and the Short Physical Performance Battery (SPPB) test. A gait analyzer was used to measure gait mechanics and steps (FRAIL-functional: fatigue, resistance, and aerobic), and a heart rate analyzer was used to measure heart rate recovery (FRAIL-nonfunctional: weight loss and chronic illness). ResultsThe participants’ mean age was 74.6 years. Of the 22 participants, 9 (41%) were robust, 10 (46%) were prefrail, and 3 (14%) were frail. In addition, 8 of 22 (36%) had at least one fall in the past year. Participants had a mean gait speed of 0.8 m/s, a mean SPPB score of 8.9, and mean TUG time of 13.8 seconds. The sensitivity, specificity, and area under the curve (AUC) for the gait analyzer against the functional domains were 1.00, 0.84, and 0.92, respectively, for SPPB (balance and gait); 0.38, 0.89, and 0.64, respectively, for FRAIL-functional; 0.45, 0.91, and 0.68, respectively, for FROP-Com; 0.60, 1.00, and 0.80, respectively, for gait speed; and 1.00, 0.94, and 0.97, respectively, for TUG. The heart rate analyzer demonstrated superior validity for the nonfunctional components of frailty, with a sensitivity of 1.00, specificity of 0.73, and AUC of 0.83. ConclusionsAgreement between the gait and heart rate analyzers and the functional components of the FRAIL scale, gait speed, and FROP-Com was significant. In addition, there was significant agreement between the heart rate analyzer and the nonfunctional components of the FRAIL scale. The gait and heart rate analyzers could be used in a screening test for frailty and falls in community-dwelling older adults but require further improvement and validation at the population level.
- Published
- 2024
- Full Text
- View/download PDF
72. Microwave-assisted hydrothermal synthesis of carbonated apatite with calcium and phosphate resources derived from green mussel shell and bovine bone wastes
- Author
-
Mochamad A. Irfa'i, Stefanus Muryanto, Antonius Prihanto, Yustina M. Pusparizkita, Rifky Ismail, J. Jamari, Athanasius P. Bayuseno, and Pau Loke Show
- Subjects
Microwave-irradiated synthesis ,Carbonate-rich apatite ,Hydroxyapatite ,Calcination ,Chemical dissolution ,Environmental sciences ,GE1-350 - Abstract
Resources recovery of calcium and phosphates from respective green mussel shells and bovine bones by calcination and chemically extracting are viable precursors for carbonate-rich apatite biomedical material applications. Because of their high osteoconductivity, carbonate-rich apatite bioceramics are being studied intensively for synthetic bone transplants. In the study, powder processing routes of calcination and following chemical dissolution in MgCl2 and H2SO4 were each for recovering calcium of mussel shells and phosphate of bovine bones yielding a crystal-forming solution feedstock for use in microwave-irradiated synthesis. FTIR spectra and XRD patterns validated the crystallinity and phase identification for as-synthesized powders. As a result, the presence of CO3, PO43-, and OH- bands in carbonate-calcium phosphate complexes were present in FTIR spectra. According to the XRD Rietveld method, the as-synthesized powder product contained brushite, carbonated hydroxyapatite (CHA), calcite, and gypsum. The recoverable CHA crystallites' size was 40 nm. This present study demonstrated that microwave irradiation synthesis of CHA powder with calcium and phosphates derived from mussel shells and bovine bones is the potential to yield a large amount of CHA for bioceramics and would aid in the design of a powder processing step for preparing the CHA powder precursor in biomedical applications.
- Published
- 2024
- Full Text
- View/download PDF
73. One becomes three: An integrative morphological and molecular analysis of the windowpane oyster Placuna (Bivalvia: Pectinida) reveals new species
- Author
-
Yi‐Tao Lin, Yi‐Xuan Li, Hai‐Xin Loke, Xiao Han, and Jian‐Wen Qiu
- Subjects
Bivalvia ,capiz shell ,phylogeny ,Placunidae ,windowpane oyster ,Ecology ,QH540-549.5 - Abstract
Abstract For decades, many marine animals have been considered to exhibit cosmopolitan or transoceanic distribution. This situation is prevalent in Asia, where many species were collected and named by American or European experts in the 1700s to early 1900s. Using the windowpane oysters Placuna—a small genus of bivalves with five recognized species—we show that careful analysis is required to reassess the validity of these species. Currently, only two species of Placuna (P. placenta and P. ephippium) widely reported in the Indo‐Pacific region have been recorded from Chinese coastal waters. Here, we described two new species of Placuna from China. Placuna vitream sp. nov. can be distinguished from P. placenta by its larger ridge angle. Phylogenetic analysis using five gene fragments fully supported that P. vitream sp. nov. is a sister to the specimen from Singapore identified as P. placenta and more distant from other Placuna species with available molecular data. Besides, based on subfossil shells, we describe Placuna aestuaria sp. nov. that differs from its congeneric species by its broad hinge, medium ridge angle, and nearly straight ridges. Finally, we suggest a combination of hinge structure and ridge angle that can be used for identifying Placuna species and preparing a key to this genus. Our findings of two new species expand the diversity of Placuna and prompt reassessment of the many presumably widely distributed marine species in Asia.
- Published
- 2024
- Full Text
- View/download PDF
74. From Traditional Adaptive Data Caching to Adaptive Context Caching: A Survey
- Author
-
Weerasinghe, Shakthi, Zaslavsky, Arkady, Loke, Seng W., Hassani, Alireza, Abken, Amin, and Medvedev, Alexey
- Subjects
Computer Science - Human-Computer Interaction ,Computer Science - Distributed, Parallel, and Cluster Computing ,Computer Science - Machine Learning ,H.3.2 ,C.4 - Abstract
Context information is in demand more than ever with the rapid increase in the number of context-aware Internet of Things applications developed worldwide. Research in context and context-awareness is being conducted to broaden its applicability in light of many practical and technical challenges. One of the challenges is improving performance when responding to a large number of context queries. Context Management Platforms that infer and deliver context to applications measure this problem using Quality of Service (QoS) parameters. Although caching is a proven way to improve QoS, transiency of context and features such as variability and heterogeneity of context queries pose an additional real-time cost management problem. This paper presents a critical survey of the state-of-the-art in adaptive data caching with the objective of developing a body of knowledge in cost- and performance-efficient adaptive caching strategies. We comprehensively survey a large number of research publications and evaluate, compare, and contrast different techniques, policies, approaches, and schemes in adaptive caching. Our critical analysis is motivated by the focus on adaptively caching context as a core research problem. A formal definition for adaptive context caching is then proposed, followed by identified features and requirements of a well-designed, objective optimal adaptive context caching strategy., Comment: This is a preprint of an article submitted to the Journal of Systems of Software
- Published
- 2022
75. The Law of Non-contradiction and Global Philosophy of Religion
- Author
-
Loke, Andrew Ter Ern
- Published
- 2024
- Full Text
- View/download PDF
76. Upgrading recalcitrant lignocellulosic biomass hydrolysis by immobilized cellulolytic enzyme–based nanobiocatalytic systems: a review
- Author
-
Gan, JianSong, Iqbal, Hafiz M. N., Show, Pau Loke, Rahdar, Abbas, and Bilal, Muhammad
- Published
- 2024
- Full Text
- View/download PDF
77. The epoxy resin system: function and role of curing agents
- Author
-
Aziz, Tariq, Haq, Fazal, Farid, Arshad, Cheng, Li, Chuah, Lai Fatt, Bokhari, Awais, Mubashir, Muhammad, Tang, Doris Ying Ying, and Show, Pau Loke
- Published
- 2024
- Full Text
- View/download PDF
78. Rheological Characteristics and Environmental Remediation Using Fe3O4–SiC Hybrid Nanomaterials in Heat Transfer Oil: Experimental Evaluation and Modeling
- Author
-
Alsaady, Mustafa, Ilyas, Suhaib Umer, Ali, Abulhassan, Maqsood, Khuram, Yan, Yuying, and Show, Pau Loke
- Published
- 2024
- Full Text
- View/download PDF
79. Recent Progress in Oxidative Dehydrogenation of Alkane (C2–C4) to Alkenes in a Fluidized Bed Reactor Under Mixed Metallic Oxide Catalyst
- Author
-
Ullah, Zahid, Khan, Muzammil, Khan, Imran, Jamil, Asif, Sikandar, Umair, Mehran, Muhammad Taqi, Mubashir, Muhammad, Tham, Pei En, Khoo, Kuan Shiong, and Show, Pau Loke
- Published
- 2024
- Full Text
- View/download PDF
80. Three intelligent computational models to predict the high-performance concrete mixture
- Author
-
Moayedi, Hossein, Foong, Loke Kok, and Le, Binh Nguyen
- Published
- 2023
- Full Text
- View/download PDF
81. Green catalyst derived from zero-valent iron onto porous biochar for removal of Rhodamine B from aqueous solution in a Fenton-like process
- Author
-
Wang, Chongqing, Show, Pau Loke, Zhang, Xiuxiu, Cao, Yijun, and Vasseghian, Yasser
- Published
- 2023
- Full Text
- View/download PDF
82. Determinants of financial resilience: insights from an emerging economy
- Author
-
Hamid, Fazelina Sahul, Loke, Yiing Jia, and Chin, Phaik Nie
- Published
- 2023
- Full Text
- View/download PDF
83. Enhanced anti-tumor efficacy with multi-transgene armed mesenchymal stem cells for treating peritoneal carcinomatosis
- Author
-
Yoon Khei Ho, Jun Yung Woo, Kin Man Loke, Lih-Wen Deng, and Heng-Phon Too
- Subjects
Mesenchymal stem cells ,Non-viral gene modification ,Peritoneal carcinomatosis ,Medicine - Abstract
Abstract Background Mesenchymal stem cells (MSCs) have garnered significant interest for their tumor-tropic property, making them potential therapeutic delivery vehicles for cancer treatment. We have previously shown the significant anti-tumour activity in mice preclinical models and companion animals with naturally occurring cancers using non-virally engineered MSCs with a therapeutic transgene encoding cytosine deaminase and uracil phosphoribosyl transferase (CDUPRT) and green fluorescent protein (GFP). Clinical studies have shown improved response rate with combinatorial treatment of 5-fluorouracil and Interferon-beta (IFNb) in peritoneal carcinomatosis (PC). However, high systemic toxicities have limited the clinical use of such a regime. Methods In this study, we evaluated the feasibility of intraperitoneal administration of non-virally engineered MSCs to co-deliver CDUPRT/5-Flucytosine prodrug system and IFNb to potentially enhance the cGAS-STING signalling axis. Here, MSCs were engineered to express CDUPRT or CDUPRT-IFNb. Expression of CDUPRT and IFNb was confirmed by flow cytometry and ELISA, respectively. The anti-cancer efficacy of the engineered MSCs was evaluated in both in vitro and in vivo model. ES2, HT-29 and Colo-205 were cocultured with engineered MSCs at various ratio. The cell viability with or without 5-flucytosine was measured with MTS assay. To further compare the anti-cancer efficacy of the engineered MSCs, peritoneal carcinomatosis mouse model was established by intraperitoneal injection of luciferase expressing ES2 stable cells. The tumour burden was measured through bioluminescence tracking. Results Firstly, there was no changes in phenotypes of MSCs despite high expression of the transgene encoding CDUPRT and IFNb (CDUPRT-IFNb). Transwell migration assays and in-vivo tracking suggested the co-expression of multiple transgenes did not impact migratory capability of the MSCs. The superiority of CDUPRT-IFNb over CDUPRT expressing MSCs was demonstrated in ES2, HT-29 and Colo-205 in-vitro. Similar observations were observed in an intraperitoneal ES2 ovarian cancer xenograft model. The growth of tumor mass was inhibited by ~ 90% and 46% in the mice treated with MSCs expressing CDUPRT-IFNb or CDUPRT, respectively. Conclusions Taken together, these results established the effectiveness of MSCs co-expressing CDUPRT and IFNb in controlling and targeting PC growth. This study lay the foundation for the development of clinical trial using multigene-armed MSCs for PC.
- Published
- 2024
- Full Text
- View/download PDF
84. Functional characterization of helminth-associated Clostridiales reveals covariates of Treg differentiation
- Author
-
Shushan Sargsian, Octavio Mondragón-Palomino, Alannah Lejeune, Defne Ercelen, Wen-Bing Jin, Alan Varghese, Yvonne A. L. Lim, Chun-Jun Guo, P’ng Loke, and Ken Cadwell
- Subjects
Clostridia ,Helminth ,Trichuris ,Microbiome ,Immune modulation ,Regulatory T cells ,Microbial ecology ,QR100-130 - Abstract
Abstract Background Parasitic helminths influence the composition of the gut microbiome. However, the microbiomes of individuals living in helminth-endemic regions are understudied. The Orang Asli, an indigenous population in Malaysia with high burdens of the helminth Trichuris trichiura, display microbiotas enriched in Clostridiales, an order of spore-forming obligate anaerobes with immunogenic properties. We previously isolated novel Clostridiales that were enriched in these individuals and found that a subset promoted the Trichuris life cycle. In this study, we aimed to further characterize the functional properties of these bacteria. Results Clostridiales isolates were profiled for their ability to perform 57 enzymatic reactions and produce short-chain fatty acids (SCFAs) and hydrogen sulfide, revealing that these bacteria were capable of a range of activities associated with metabolism and host response. Consistent with this finding, monocolonization of mice with individual isolates identified bacteria that were potent inducers of regulatory T-cell (Treg) differentiation in the colon. Comparisons between variables revealed by these studies identified enzymatic properties correlated with Treg induction and Trichuris egg hatching. Conclusion We identified Clostridiales species that are sufficient to induce high levels of Tregs. We also identified a set of metabolic activities linked with Treg differentiation and Trichuris egg hatching mediated by these newly isolated bacteria. Altogether, this study provides functional insights into the microbiotas of individuals residing in a helminth-endemic region. Video Abstract
- Published
- 2024
- Full Text
- View/download PDF
85. Crystal structure of human peptidylarginine deiminase type VI (PAD6) provides insights into its inactivity
- Author
-
Fanomezana M. Ranaivoson, Rieke Bande, Isabell Cardaun, Antonio De Riso, Annette Gärtner, Pui Loke, Christina Reinisch, Prasuna Vogirala, and Edward Beaumont
- Subjects
mammalian fertilization ,cytoplasmic lattices ,human peptidylarginine deiminase vi ,protein structures ,pad6 ,Crystallography ,QD901-999 - Abstract
Human peptidylarginine deiminase isoform VI (PAD6), which is predominantly limited to cytoplasmic lattices in the mammalian oocytes in ovarian tissue, is essential for female fertility. It belongs to the peptidylarginine deiminase (PAD) enzyme family that catalyzes the conversion of arginine residues to citrulline in proteins. In contrast to other members of the family, recombinant PAD6 was previously found to be catalytically inactive. We sought to provide structural insight into the human homologue to shed light on this observation. We report here the first crystal structure of PAD6, determined at 1.7 Å resolution. PAD6 follows the same domain organization as other structurally known PAD isoenzymes. Further structural analysis and size-exclusion chromatography show that PAD6 behaves as a homodimer similar to PAD4. Differential scanning fluorimetry suggests that PAD6 does not coordinate Ca2+ which agrees with acidic residues found to coordinate Ca2+ in other PAD homologs not being conserved in PAD6. The crystal structure of PAD6 shows similarities with the inactive state of apo PAD2, in which the active site conformation is unsuitable for catalytic citrullination. The putative active site of PAD6 adopts a non-productive conformation that would not allow protein–substrate binding due to steric hindrance with rigid secondary structure elements. This observation is further supported by the lack of activity on the histone H3 and cytokeratin 5 substrates. These findings suggest a different mechanism for enzymatic activation compared with other PADs; alternatively, PAD6 may exert a non-enzymatic function in the cytoplasmic lattice of oocytes and early embryos.
- Published
- 2024
- Full Text
- View/download PDF
86. Teaching Greek mythology through a scenario-based game
- Author
-
Gina Salapata, Jonathan Tracy, and Kevan Loke
- Subjects
Trojan War ,Homer ,Geometric style ,scenario-based game ,active learning ,Theory and practice of education ,LB5-3640 ,Ancient history ,D51-90 ,Greek language and literature. Latin language and literature ,PA - Abstract
In this article, we showcase the pilot scenario of The Trojan War, an educational self-directed game that combines text inspired by ancient Greek (as well as Roman) literature with graphics based on the ‘Geometric style’, an authentic Greek style of painting contemporary with the composition of the Homeric epics. Our game uses interactive scenarios to support active learning strategies of students interested in Classical Studies in both tertiary and secondary education. Players can take on the role of key characters, making choices that can prevent, start, or stop the Trojan War, as well as determine their own personal outcomes. The learners are thus presented with the opportunity to explore alternative pathways to rewrite the history of the War. In the process, they can apply their subject knowledge and develop their intellectual and critical skills. They also become familiar with a distinctive and expressive early Greek artistic style, the so-called Geometric. Rather than focusing on winning, the game aims to give students the opportunity to engage with important ideas and values of ancient Greek culture by exploring multiple perspectives on the topic. It also provides a valuable lesson on the potentially wide-ranging consequences of individual choices, which is a core element of responsible citizenship.
- Published
- 2024
- Full Text
- View/download PDF
87. PDADMAC/Alginate-Coated Gold Nanorod For Eradication of Staphylococcus Aureus Biofilms
- Author
-
Manimaran M, Teo YY, Kah JCY, Beishenaliev A, Loke YL, Foo YY, Ng SF, Chee CF, Chin SP, Faruqu FN, Chang CY, Misran M, Chung LY, Leo BF, Chiou SH, Chang CC, Tay ST, and Kiew LV
- Subjects
biofilm ,gold nanorod ,s. aureus ,pdadmac ,mrsa ,mssa ,Medicine (General) ,R5-920 - Abstract
Malarmugila Manimaran,1,* Yin Yin Teo,2 James Chen Yong Kah,3 Adilet Beishenaliev,1 Yean Leng Loke,2 Yiing Yee Foo,1 Shiow-Fern Ng,4 Chin Fei Chee,5 Sek Peng Chin,6 Farid Nazer Faruqu,1 Chia-Yu Chang,7 Misni Misran,2 Lip Yong Chung,6 Bey Fen Leo,8,* Shih-Hwa Chiou,9,10 Chia-Ching Chang,7,11– 13 Sun Tee Tay,14 Lik Voon Kiew1,7 1Department of Pharmacology, Faculty of Medicine, Universiti Malaya, Kuala Lumpur, Malaysia; 2Department of Chemistry, Faculty of Science, Universiti Malaya, Kuala Lumpur, Malaysia; 3Department of Biomedical Engineering, College of Design and Engineering, National University of Singapore, Singapore, Singapore; 4Centre for Drug Delivery Technology and Vaccine, Faculty of Pharmacy, Universiti Kebangsaan Malaysia, Kuala Lumpur, Malaysia; 5Nanotechnology Catalysis Research Centre, Universiti Malaya, Kuala Lumpur, Malaysia; 6Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Universiti Malaya, Kuala Lumpur, Malaysia; 7Department of Biological Science and Technology, National Yang Ming Chiao Tung University, Hsinchu, Taiwan, Republic of China; 8Department of Molecular Medicine, Faculty of Medicine, Universiti Malaya, Kuala Lumpur, Malaysia; 9Department of Medical Research, Taipei Veterans General Hospital, Taipei, Taiwan, Republic of China; 10Institute of Pharmacology, National Yang Ming Chiao Tung University, Taipei, Taiwan, Republic of China; 11Department of Electrophysics, National Yang Ming Chiao Tung University, Hsinchu, Taiwan, Republic of China; 12Center for Intelligent Drug Systems and Smart Bio-devices, National Yang Ming Chiao Tung University, Hsinchu, Taiwan, Republic of China; 13Institute of Physics, Academia Sinica, Nankang, Taipei, Taiwan, Republic of China; 14Department of Medical Microbiology, Faculty of Medicine, Universiti Malaya, Kuala Lumpur, Malaysia*These authors contributed equally to this workCorrespondence: Chia-Ching Chang; Lik Voon Kiew, Email ccchang01@nycu.edu.tw; lvkiew@um.edu.myIntroduction: Over 75% of clinical microbiological infections are caused by bacterial biofilms that grow on wounds or implantable medical devices. This work describes the development of a new poly(diallyldimethylammonium chloride) (PDADMAC)/alginate-coated gold nanorod (GNR/Alg/PDADMAC) that effectively disintegrates the biofilms of Staphylococcus aureus (S. aureus), a prominent pathogen responsible for hospital-acquired infections.Methods: GNR was synthesised via seed-mediated growth method, and the resulting nanoparticles were coated first with Alg and then PDADMAC. FTIR, zeta potential, transmission electron microscopy, and UV–Vis spectrophotometry analysis were performed to characterise the nanoparticles. The efficacy and speed of the non-coated GNR and GNR/Alg/PDADMAC in disintegrating S. aureus-preformed biofilms, as well as their in vitro biocompatibility (L929 murine fibroblast) were then studied.Results: The synthesised GNR/Alg/PDADMAC (mean length: 55.71 ± 1.15 nm, mean width: 23.70 ± 1.13 nm, aspect ratio: 2.35) was biocompatible and potent in eradicating preformed biofilms of methicillin-resistant (MRSA) and methicillin-susceptible S. aureus (MSSA) when compared to triclosan, an antiseptic used for disinfecting S. aureus colonisation on abiotic surfaces in the hospital. The minimum biofilm eradication concentrations of GNR/Alg/PDADMAC (MBEC50 for MRSA biofilm = 0.029 nM; MBEC50 for MSSA biofilm = 0.032 nM) were significantly lower than those of triclosan (MBEC50 for MRSA biofilm = 10,784 nM; MBEC50 for MRSA biofilm 5967 nM). Moreover, GNR/Alg/PDADMAC was effective in eradicating 50% of MRSA and MSSA biofilms within 17 min when used at a low concentration (0.15 nM), similar to triclosan at a much higher concentration (50 μM). Disintegration of MRSA and MSSA biofilms was confirmed by field emission scanning electron microscopy and confocal laser scanning microscopy.Conclusion: These findings support the potential application of GNR/Alg/PDADMAC as an alternative agent to conventional antiseptics and antibiotics for the eradication of medically important MRSA and MSSA biofilms.Keywords: biofilm, gold nanorod, S. aureus, PDADMAC, MRSA, MSSA
- Published
- 2024
88. Patient-specific tissue engineered vascular graft for aortic arch reconstructionCentral MessagePerspective
- Author
-
Hidenori Hayashi, MD, Jacqueline Contento, BSE, Hiroshi Matsushita, MD, Paige Mass, MS, Vincent Cleveland, MS, Seda Aslan, MS, Amartya Dave, BS, Raquel dos Santos, Angie Zhu, Emmett Reid, Tatsuya Watanabe, MD, PhD, Nora Lee, MPAP, PA-C, Tyler Dunn, BS, Umar Siddiqi, Katherine Nurminsky, BS, Vivian Nguyen, BA, Keigo Kawaji, PhD, Joey Huddle, MS, Luka Pocivavsek, MD, PhD, Jed Johnson, PhD, Mark Fuge, PhD, Yue-Hin Loke, MD, Axel Krieger, PhD, Laura Olivieri, MD, and Narutoshi Hibino, MD, PhD
- Subjects
congenital heart disease ,tissue engineered vascular grafts ,aortic arch reconstruction ,wall shear stress ,computational fluid dynamics ,hemodynamics ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 ,Surgery ,RD1-811 - Abstract
Objective(s): The complexity of aortic arch reconstruction due to diverse 3-dimensional geometrical abnormalities is a major challenge. This study introduces 3-dimensional printed tissue-engineered vascular grafts, which can fit patient-specific dimensions, optimize hemodynamics, exhibit antithrombotic and anti-infective properties, and accommodate growth. Methods: We procured cardiac magnetic resonance imaging with 4-dimensional flow for native porcine anatomy (n = 10), from which we designed tissue-engineered vascular grafts for the distal aortic arch, 4 weeks before surgery. An optimal shape of the curved vascular graft was designed using computer-aided design informed by computational fluid dynamics analysis. Grafts were manufactured and implanted into the distal aortic arch of porcine models, and postoperative cardiac magnetic resonance imaging data were collected. Pre- and postimplant hemodynamic data and histology were analyzed. Results: Postoperative magnetic resonance imaging of all pigs with 1:1 ratio of polycaprolactone and poly-L-lactide-co-ε-caprolactone demonstrated no specific dilatation or stenosis of the graft, revealing a positive growth trend in the graft area from the day after surgery to 3 months later, with maintaining a similar shape. The peak wall shear stress of the polycaprolactone/poly-L-lactide-co-ε-caprolactone graft portion did not change significantly between the day after surgery and 3 months later. Immunohistochemistry showed endothelization and smooth muscle layer formation without calcification of the polycaprolactone/poly-L-lactide-co-ε-caprolactone graft. Conclusions: Our patient-specific polycaprolactone/poly-L-lactide-co-ε-caprolactone tissue-engineered vascular grafts demonstrated optimal anatomical fit maintaining ideal hemodynamics and neotissue formation in a porcine model. This study provides a proof of concept of patient-specific tissue-engineered vascular grafts for aortic arch reconstruction.
- Published
- 2024
- Full Text
- View/download PDF
89. Strategies to improve implementation of cascade testing in hereditary cancer syndromes: a systematic review
- Author
-
Jianbang Chiang, Ziyang Chua, Jia Ying Chan, Ashita Ashish Sule, Wan Hsein Loke, Elaine Lum, Marcus Eng Hock Ong, Nicholas Graves, and Joanne Ngeow
- Subjects
Medicine ,Genetics ,QH426-470 - Abstract
Abstract Hereditary cancer syndromes constitute approximately 10% of all cancers. Cascade testing involves testing of at-risk relatives to determine if they carry the familial pathogenic variant. Despite growing efforts targeted at improving cascade testing uptake, current literature continues to reflect poor rates of uptake, typically below 30%. This study aims to systematically review current literature on intervention strategies to improve cascade testing, assess the quality of intervention descriptions and evaluate the implementation outcomes of listed interventions. We searched major databases using keywords and subject heading of “cascade testing”. Interventions proposed in each study were classified according to the Effective Practice and Organization of Care (EPOC) taxonomy. Quality of intervention description was assessed using the TIDieR checklist, and evaluation of implementation outcomes was performed using Proctor’s Implementation Outcomes Framework. Improvements in rates of genetic testing uptake was seen in interventions across the different EPOC taxonomy strategies. The average TIDieR score was 7.3 out of 12. Items least reported include modifications (18.5%), plans to assess fidelity/adherence (7.4%) and actual assessment of fidelity/adherence (7.4%). An average of 2.9 out of 8 aspects of implementation outcomes were examined. The most poorly reported outcomes were cost, fidelity and sustainability, with only 3.7% of studies reporting them. Most interventions have demonstrated success in improving cascade testing uptake. Uptake of cascade testing was highest with delivery arrangement (68%). However, the quality of description of interventions and assessment of implementation outcomes are often suboptimal, hindering their replication and implementation downstream. Therefore, further adoption of standardized guidelines in reporting of interventions and formal assessment of implementation outcomes may help promote translation of these interventions into routine practice.
- Published
- 2024
- Full Text
- View/download PDF
90. Foundations of Emergency Medicine: Impact of a Standardized, Open-access, Core Content Curriculum on In-Training Exam Scores
- Author
-
Jaime Jordan, Natasha Wheaton, Nicholas D. Hartman, Dana Loke, Nathaniel Shekem, Anwar Osborne, P. Logan Weygandt, and Kristen Grabow Moore
- Subjects
Medicine ,Medical emergencies. Critical care. Intensive care. First aid ,RC86-88.9 - Abstract
Introduction: Learners frequently benefit from modalities such as small-group, case-based teaching and interactive didactic experiences rather than passive learning methods. These contemporary techniques are features of Foundations of Emergency Medicine (FoEM) curricula, and particularly the Foundations I (F1) course, which targets first-year resident (PGY-1) learners. The American Board of Emergency Medicine administers the in-training exam (ITE) that provides an annual assessment of EM-specific medical knowledge. We sought to assess the effect of F1 implementation on ITE scores. Methods: We retrospectively analyzed data from interns at four EM residency programs accredited by the Accreditation Council for Graduate Medical Education. We collected data in 2021. Participating sites were geographically diverse and included three- and four-year training formats. We collected data from interns two years before (control group) and two years after (intervention group) implementation of F1 at each site. Year of F1 implementation ranged from 2015–2018 at participating sites. We abstracted data using a standard form including program, ITE raw score, year of ITE administration, US Medical Licensing Exam Step 1 score, Step 2 Clinical Knowledge (CK) score, and gender. We performed univariable and multivariable linear regression to explore differences between intervention and control groups. Results: We collected data for 180 PGY-1s. Step 1 and Step 2 CK scores were significant predictors of ITE in univariable analyses (both with P
- Published
- 2024
- Full Text
- View/download PDF
91. Pioneering Arterial Hypertension Phenotyping on Nationally Aggregated Electronic Health Records
- Author
-
Jing Wei Neo, Qihuang Xie, Pei San Ang, Hui Xing Tan, Belinda Foo, Yen Ling Koon, Amelia Ng, Siew Har Tan, Desmond Teo, Mun Yee Tham, Aaron Yap, Nicholas Ng, Celine Wei Ping Loke, Li Fung Peck, Huilin Huang, and Sreemanee Raaj Dorajoo
- Subjects
hypertension ,misclassification bias ,clinical phenotyping ,electronic health record ,rule-based algorithm ,Therapeutics. Pharmacology ,RM1-950 ,Other systems of medicine ,RZ201-999 ,Public aspects of medicine ,RA1-1270 - Abstract
Background: Hypertension is frequently studied in epidemiological studies that have been conducted using retrospective observational data, either as an outcome or a variable. However, there are few validation studies investigating the accuracy of hypertension phenotyping algorithms in aggregated electronic health record (EHR) data. Methods: Utilizing a centralized repository of inpatient EHR data from Singapore for the period of 2019–2020, a new algorithm that incorporates both diagnostic codes and medication details (Diag+Med) was devised. This algorithm was intended to supplement and improve the diagnostic code-only model (Diag-Only) for the classification of hypertension. We computed various metrics (sensitivity, specificity, positive predictive value (PPV), and negative predictive value (NPV)) to assess the algorithm’s effectiveness in identifying hypertension on 2813 chart-reviewed records. This pool was composed of two patient cohorts: a random sampling of all inpatient admissions (Random Cohort) and a targeted group with atrial fibrillation diagnoses (AF Cohort). Results: The Diag+Med algorithm was more sensitive at detecting hypertension patients in both cohorts compared to the Diag-Only algorithm (83.8 and 87.6% vs. 68.2 and 66.5% in the Random and AF Cohorts, respectively). These improvements in sensitivity came at minimal costs in terms of PPV reductions (88.2 and 90.3% vs. 91.4 and 94.2%, respectively). Conclusion: The combined use of diagnosis codes and specific antihypertension medication exposure patterns facilitates a more accurate capture of patients with hypertension in a database of aggregated EHRs from diverse healthcare institutions in Singapore. The results presented here allow for the bias correction of risk estimates derived from observational studies involving hypertension.
- Published
- 2024
- Full Text
- View/download PDF
92. Influence of lack of blinding on the estimation of medication-related harms: a retrospective cohort study of randomized controlled trials
- Author
-
Chang Xu, Fengying Zhang, Suhail A. R. Doi, Luis Furuya-Kanamori, Lifeng Lin, Haitao Chu, Xi Yang, Sheyu Li, Liliane Zorzela, Su Golder, Yoon Loke, and Sunita Vohra
- Subjects
Randomized controlled trials ,Blinding ,Harms ,Adverse effects ,Medicine - Abstract
Abstract Background Empirical evidence suggests that lack of blinding may be associated with biased estimates of treatment benefit in randomized controlled trials, but the influence on medication-related harms is not well-recognized. We aimed to investigate the association between blinding and clinical trial estimates of medication-related harms. Methods We searched PubMed from January 1, 2015, till January 1, 2020, for systematic reviews with meta-analyses of medication-related harms. Eligible meta-analyses must have contained trials both with and without blinding. Potential covariates that may confound effect estimates were addressed by restricting trials within the comparison or by hierarchical analysis of harmonized groups of meta-analyses (therefore harmonizing drug type, control, dosage, and registration status) across eligible meta-analyses. The weighted hierarchical linear regression was then used to estimate the differences in harm estimates (odds ratio, OR) between trials that lacked blinding and those that were blinded. The results were reported as the ratio of OR (ROR) with its 95% confidence interval (CI). Results We identified 629 meta-analyses of harms with 10,069 trials. We estimated a weighted average ROR of 0.68 (95% CI: 0.53 to 0.88, P
- Published
- 2024
- Full Text
- View/download PDF
93. From Distributed Quantum Computing to Quantum Internet Computing: an Overview
- Author
-
Loke, Seng W.
- Subjects
Computer Science - Distributed, Parallel, and Cluster Computing ,Computer Science - Emerging Technologies - Abstract
The possibility of quantum computing has been proposed decades ago, at least as far back as the 1980s, and distributed quantum computing has been studied around two decades ago. Recent times have seen experimental successes and advances in quantum computer hardware and in quantum networking, leading towards the quantum Internet. We provide in this paper an overview of concepts and ideas in distributed quantum computing since over two decades ago as well as look at recent efforts in the area, and consider how, with the development of the quantum Internet, distributed quantum computing is evolving into quantum Internet computing.
- Published
- 2022
94. The Rise of Quantum Internet Computing
- Author
-
Loke, Seng W.
- Subjects
Computer Science - Emerging Technologies ,Computer Science - Distributed, Parallel, and Cluster Computing - Abstract
This article highlights quantum Internet computing as referring to distributed quantum computing over the quantum Internet, analogous to (classical) Internet computing involving (classical) distributed computing over the (classical) Internet. Relevant to quantum Internet computing would be areas of study such as quantum protocols for distributed nodes using quantum information for computations, quantum cloud computing, delegated verifiable blind or private computing, non-local gates, and distributed quantum applications, over Internet-scale distances.
- Published
- 2022
95. The character correspondence in the stable range over a p-adic field
- Author
-
Loke, Hung Yean and Przebinda, Tomasz
- Subjects
Mathematics - Representation Theory ,22E46, 22E47 - Abstract
Given a real irreducible dual pair there is an integral kernel operator which maps the distribution character of an irreducible admissible representation of the group with the smaller or equal rank to an invariant eigendistribution on the group with the larger or equal rank. If the pair is in the stable range and if the representation is unitary, then the resulting distribution is the character of the representation obtained via Howe's correspondence. This construction was transferred to the p-adic case and a conjecture was formulated. In this note we verify a weaker version of this conjecture for dual pairs in the stable range over a p-adic field., Comment: arXiv admin note: text overlap with arXiv:1602.08401
- Published
- 2022
96. Improve carbon dioxide emission prediction in the Asia and Oceania (OECD): nature-inspired optimisation algorithms versus conventional machine learning
- Author
-
Loke Kok Foong, Vojtech Blazek, Lukas Prokop, Stanislav Misak, Farruh Atamurotov, and Nima Khalilpoor
- Subjects
CO2 emission ,environmental policy ,metaheuristic algorithm ,OECD ,Engineering (General). Civil engineering (General) ,TA1-2040 - Abstract
This paper investigates the application of three nature-inspired optimisation algorithms – SHO, MFO, and GOA – combined with four machine learning methods – Gaussian Processes, Linear Regression, MLP, and Random Forest – to enhance carbon dioxide emission prediction in the OECD – Asia and Oceania region. The study uses historical carbon dioxide emissions data, socioeconomic indicators such as GDP, population density, energy consumption, and urbanisation rates, and environmental indicators such as temperature, precipitation, and forest cover. Through comprehensive experimentation, the study evaluates the performance of each combination, revealing varying effectiveness levels. The MFO-MLP combination achieved the highest accuracy with R2 values of 0.9996 and 0.9995 and RMSE values of 11.7065 and 12.8890 for the training and testing datasets, respectively. The GOA-MLP configuration achieved R2 values of 0.9994 and 0.99934 and RMSE values of 15.01306 and 14.59333. The SHO-MLP combination, while effective, showed lower performance with R2 values of 0.9915 and 0.9946 and RMSE values of 55.4516 and 41.575. The findings suggest hybrid techniques can significantly enhance prediction accuracy compared to conventional methods. This research provides valuable insights for policymakers and stakeholders, indicating that optimised machine learning models can support more informed and effective environmental policy-making and sustainability efforts in the OECD – Asia and Oceania region. Future research should explore additional optimisation algorithms and ensemble techniques to improve prediction robustness and accuracy. These findings offer a robust tool for policymakers to forecast emissions more accurately, aiding in developing targeted strategies to reduce carbon footprints and achieve climate goals.
- Published
- 2024
- Full Text
- View/download PDF
97. Cohort profile: migraine exposures and cardiovascular health in Hong Kong Chinese women (MECH-HK)
- Author
-
Lin Yang, Qi Sun, Jing Qin, Harry Haoxiang Wang, Yao Jie Xie, Chun Hao, Qingling Yang, and Alice Yuen Loke
- Subjects
Medicine - Abstract
Purpose Evidence about the associations of migraine features with cardiovascular risk profiles in Chinese population is lacking. The Migraine Exposures and Cardiovascular Health in Hong Kong Chinese Women (MECH-HK) cohort was constructed to investigate longitudinal migraine features and their cardiovascular implications in Hong Kong Chinese women.Participants We enrolled 4221 Hong Kong Chinese women aged 30 years or above from October 2019 to December 2020. Demographics, reproductive information, lifestyle factors, disease history, blood lipids and glucose, anthropometrics and body compositions were measured during baseline and follow-up. Migraine diagnosis followed the International Classification of Headache Disorders-3 criteria. Migraine features were longitudinally tracked using a migraine diary and summarised by a wide range of epidemiological metrics. Cardiovascular health was assessed using the Framingham risk score (FRS).Findings to date From October 2021 to June 2023, 3455 women completed the first follow-up measurement. The retention rate was 81.9%. The average age at baseline was 54.40 years. The mean blood glucose, high-density lipoprotein cholesterol and low-density lipoprotein cholesterol levels were 6.44 mmol/L, 65.06 mg/dL and 102.40 mg/dL, respectively. The average FRS was 0.06. Participants had a 10.3% prevalence of migraine or probable migraine. After 1.27 years of follow-up, the median migraine attack frequency was 0.99 attacks/month, with an incidence rate of 2.55 attacks/person-month and a median duration of 7.70 hours/attack. Sleep problems (64.7%) and stress (54.0%) were the top triggers, while prevalent accompanying symptoms were nausea (67.4%), photophobia (39.9%), phonophobia (30.0%) and vomiting (26.2%). Migraine auras included blurred visions (59.6%), flashing lights (41.3%), blind spots (33.0%), pins and needles (6.4%) and halo (1.8%).Future plans The follow-up for the cohort will be implemented every 2 years. MECH-HK will provide unique longitudinal data on migraine features in Hong Kong women. The linkage between migraine features and cardiovascular disease risk progression will be identified by a long-term observation.
- Published
- 2024
- Full Text
- View/download PDF
98. Proton conductivity of the protein-based velvet worm slime
- Author
-
Rinku Saran, Maciej Klein, Bhargy Sharma, Jun Jie Loke, Quentin Moana Perrin, and Ali Miserez
- Subjects
Engineering ,Materials application ,Science - Abstract
Summary: The properties of complex bodily fluids are linked to their biological functions through natural selection. Velvet worms capture their prey by ensnaring them with a proteinaceous fluid (slime). We examined the electrical conductivity of slime and found that dry slime is an insulator. However, its conductivity can increase by up to 106 times in its hydrated state, which can be further increased by an order in magnitude under acidic hydration (pH ≈ 2.3). The transient current measured using ion-blocking electrodes showed a continuous decay for up to 7 h, revealing slime’s nature as a proton conducting material. Slime undergoes a spontaneous fibrilization process producing high aspect ratio ≈ 105 fibers that exhibit an average conductivity ≈2.4 ± 1.1 mS cm−1. These findings enhance our understanding of slime as a natural biopolymer and provide molecular-level guidelines to rationally design biomaterials that may be employed as hygroscopic conductors.
- Published
- 2024
- Full Text
- View/download PDF
99. Decadal decline of functional diversity despite increasing taxonomic and phylogenetic diversity of coral reefs under chronic urbanisation stress
- Author
-
Y.K. Samuel Chan, C.S. Lionel Ng, Karenne P.P. Tun, Loke Ming Chou, and Danwei Huang
- Subjects
Biodiversity loss ,Ecosystem functioning ,Evolutionary history ,Marine ecosystems ,Reef degradation ,Resilience ,Ecology ,QH540-549.5 - Abstract
Coral reefs provide a multitude of ecosystem functions owing to the high levels of biodiversity they host. Coral species, as the foundation of shallow-water reefs, differ in their contributions toward the functioning of the ecosystem due in part to the disparate phylogenetic histories of scleractinian lineages. Understanding the spatial patterns and temporal trajectories of these biodiversity facets, as well as their interrelationships, is critical for more targeted conservation strategies in the face of widespread habitat degradation and climate change. Here, we analyse long-term benthic data spanning 1986 through 2020 on coral reefs in Singapore, which have been impacted by decades of urbanisation-related and thermal stressors, to test for differences between coral biodiversity facets—specifically, taxonomic, phylogenetic (evolutionary relatedness between species), and functional (occupancy of functional trait space) richness and diversity. Analyses show that taxonomic and phylogenetic richness and diversity measures increased over the 35-year period despite declines during major bleaching events. Yet, while taxonomic and phylogenetic diversity increased, functional richness and diversity declined over the same period. Community-weighted trait measures indicate a shift towards dominance of more stress-tolerant traits such as slower growth rates, smaller corallite sizes, and massive colony forms. Together, these trends highlight the effects of chronic urban stressors alongside major bleaching events impacting reef assemblages. Critically, such assemblage shifts and functional diversity declines were masked by increasing taxonomic diversity, which is most commonly assessed, and could erode ecosystem resilience. The temporal decoupling of the biodiversity facets examined here underscore the need for more comprehensive monitoring of reefs through a combination of trait-based approaches alongside traditional field surveys at finer taxonomic resolution.
- Published
- 2024
- Full Text
- View/download PDF
100. Impact of patient support programmes among patients with severe asthma treated with biological therapies: a systematic literature review and indirect treatment comparison
- Author
-
Azeem Majeed, Liam G Heaney, Zhiyi Lan, Tamsin Morris, Olivia Fulton, Adrian P J Rabe, Wei J Loke, Danuta Kielar, Vivian H Shih, Lynda Olinger, Mihaela G Musat, and Sharada Harricharan
- Subjects
Medicine ,Diseases of the respiratory system ,RC705-779 - Abstract
Introduction Effective treatment of severe asthma requires patient adherence to inhaled and biological medications. Previous work has shown that patient support programmes (PSP) can improve adherence in patients with chronic diseases, but the impact of PSPs in patients with severe asthma treated with biologics has not been thoroughly investigated.Methods We conducted a systematic literature review to understand the impact of PSPs on treatment adherence, asthma control and health-related quality of life (HRQoL) in patients with severe asthma. Embase, MEDLINE and EconLit databases were searched for studies published from 2003 (the year of the first biological approval for severe asthma) to June 2023 that described PSP participation among patients with severe asthma on biological treatment. Direct pooling of outcomes was not possible due to the heterogeneity across studies, so an indirect treatment comparison (ITC) was performed to determine the effect of PSP participation on treatment discontinuation. The ITC used patient-level data from patients treated with benralizumab either enrolled in a PSP (VOICE study, Connect 360 PSP) or not enrolled in a PSP (Benralizumab Patient Access Programme study) in the UK.Findings 25 records of 21 studies were selected. Six studies investigated the impact of PSPs on treatment adherence, asthma control or HRQoL. All six studies reported positive outcomes for patients enrolled in PSPs; the benefits of each PSP were closely linked to the services provided. The ITC showed that patients in the Connect 360 PSP group were less likely to discontinue treatment compared with the non-PSP group (OR 0.26, 95% CI 0.11 to 0.57, p
- Published
- 2024
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.