There are three major secretion pathways in gram-negative bacteria (57). The majority of the exoproteins are secreted via a two-step mechanism including a stopover in the periplasm (23). These proteins are translocated across the inner membrane in a signal sequence-dependent general export pathway (45). The subsequent translocation across the outer membrane requires 12 to 14 helper proteins (4, 23, 46). The second pathway used by several bacterial pathogens involves a transporter consisting of more than 20 secretion proteins (41). The protein is secreted through the inner and outer membranes simultaneously, bypassing the periplasm, and the secretion signals are located within 50 to 100 N-terminal residues (43). The last is an ATP-binding cassette (ABC) pathway, which also bypasses the periplasm (19). The protein is synthesized without an N-terminal signal sequence, and its secretion across two membranes involves three specific envelope proteins, ABC protein, membrane fusion protein and outer membrane protein. The secreted protein contains a C-terminal targeting signal containing several repeats of the consensus sequence GGXGXD (17, 22, 56) and an amphipathic α-helix (35, 50, 56). Lipases of the Pseudomonas species are secreted by at least two different pathways (31). The two-step pathway, which requires at least 12 xcp gene products, is used by the signal sequence-containing lipases of P. aeruginosa (55) and P. glumae (25). These lipases also need molecular chaperones, which are located immediately downstream of the lipase structural genes of P. cepacia (33), P. glumae (24), and P. aeruginosa (13, 29, 30, 59). The lipase of P. fluorescens B52 was reported to be secreted by the ABC pathway mediated by the ABC transporter of P. aeruginosa alkaline protease (18), although the structural gene of the ABC transporter in P. fluorescens was not identified. P. fluorescens SIK W1, a psychrotrophic bacterium, was found to secrete a thermostable lipase (7). We cloned this thermostable lipase (14) and expressed it in Escherichia coli, but it accumulated as inactive inclusion bodies in the cell (15). Sequence analysis showed that the lipase contained a C-terminal targeting signal sequence instead of an N-terminal signal sequence. Accordingly, the ABC transporter was assumed to be present in P. fluorescens SIK W1 because there is a specific ABC transporter for each protein secreted by the ABC pathway. Therefore, we searched for the ABC transporter gene in P. fluorescens SIK W1 and identified three components of the ABC transporter upstream of the lipase gene. In addition, the protease and protease inhibitor were located upstream of the three components. The ABC transporter of P. fluorescens was found to show temperature dependency in its secretory function when expressed in E. coli, and this suggested why P. fluorescens produces the lipase optimally at low temperature. There has been no report on the ABC transporter specific to lipase except in the Serratia marcescens Lip system (3), which is located separately from the lipase gene on the chromosome and secretes protease, lipase, and S-layer protein (34). In this paper, we report a new ABC transporter which is not only functionally specific for lipase but also structurally organized with the lipase gene as an operon on the chromosome.