98 results on '"Joakim Andréasson"'
Search Results
52. A Caged Ret Kinase Inhibitor and its Effect on Motoneuron Development in Zebrafish Embryos
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Jesper R. Nilsson, David Bliman, Joakim Andréasson, Petronella Kettunen, and Morten Grøtli
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Embryo, Nonmammalian ,Light ,Biology ,010402 general chemistry ,Proto-Oncogene Mas ,01 natural sciences ,Article ,Pyrazolopyrimidine ,03 medical and health sciences ,chemistry.chemical_compound ,Adenosine Triphosphate ,In vivo ,Animals ,Humans ,Binding site ,Receptor ,Protein Kinase Inhibitors ,Zebrafish ,030304 developmental biology ,Motor Neurons ,0303 health sciences ,Binding Sites ,Photolysis ,Multidisciplinary ,Kinase ,Proto-Oncogene Proteins c-ret ,Biological Sciences ,biology.organism_classification ,3. Good health ,0104 chemical sciences ,Cell biology ,chemistry ,Biochemistry ,Drug Design ,Chemical Sciences ,Adenosine triphosphate - Abstract
Proto-oncogene tyrosine-protein kinase receptor RET is implicated in the development and maintenance of neurons of the central and peripheral nervous systems. Attaching activity-compromising photocleavable groups (caging) to inhibitors could allow for external spatiotemporally controlled inhibition using light, potentially providing novel information on how these kinase receptors are involved in cellular processes. Here, caged RET inhibitors were obtained from 3-substituted pyrazolopyrimidine-based compounds by attaching photolabile groups to the exocyclic amino function. The most promising compound displayed excellent inhibitory effect in cell-free, as well as live-cell assays upon decaging. Furthermore, inhibition could be efficiently activated with light in vivo in zebrafish embryos and was shown to effect motoneuron development.
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- 2015
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53. Design, Synthesis and Inhibitory Activity of Photoswitchable RET Kinase Inhibitors
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Rubén Ferreira, Joakim Andréasson, Morten Grøtli, Carlos Solano, and Jesper R. Nilsson
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endocrine system ,Light ,endocrine system diseases ,Photochemistry ,Plasma protein binding ,Inhibitory postsynaptic potential ,Bioinformatics ,Article ,Receptor tyrosine kinase ,Medicine ,Binding site ,Protein Kinase Inhibitors ,Binding Sites ,Multidisciplinary ,biology ,Kinase ,Effector ,business.industry ,Receptor Protein-Tyrosine Kinases ,Transmembrane protein ,Cell biology ,Delayed-Action Preparations ,Drug Design ,Chemical Sciences ,biology.protein ,Signal transduction ,business ,Protein Binding - Abstract
REarranged during Transfection (RET) is a transmembrane receptor tyrosine kinase required for normal development and maintenance of neurons of the central and peripheral nervous systems. Deregulation of RET and hyperactivity of the RET kinase is intimately connected to several types of human cancers, most notably thyroid cancers, making it an attractive therapeutic target for small-molecule kinase inhibitors. Novel approaches, allowing external control of the activity of RET, would be key additions to the signal transduction toolbox. In this work, photoswitchable RET kinase inhibitors based on azo-functionalized pyrazolopyrimidines were developed, enabling photonic control of RET activity. The most promising compound displays excellent switching properties and stability with good inhibitory effect towards RET in cell-free as well as live-cell assays and a significant difference in inhibitory activity between its two photoisomeric forms. As the first reported photoswitchable small-molecule kinase inhibitor, we consider the herein presented effector to be a significant step forward in the development of tools for kinase signal transduction studies with spatiotemporal control over inhibitor concentration in situ.
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- 2015
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54. 8-Triazolylpurines: Towards Fluorescent Inhibitors of the MDM2/p53 Interaction
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Jesper R. Nilsson, Joakim Andréasson, Jaeki Min, Jimmy Jacobsson, Richard W. Kriwacki, Morten Grøtli, Mariell Pettersson, David Bliman, Luigi I. Iconaru, and R. Kiplin Guy
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Models, Molecular ,Multidisciplinary ,Molecular Structure ,lcsh:R ,Molecular Conformation ,lcsh:Medicine ,Biological activity ,Proto-Oncogene Proteins c-mdm2 ,Nuclear magnetic resonance spectroscopy ,Plasma protein binding ,Fluorescence ,Small molecule ,Biochemistry ,Docking (molecular) ,Purines ,Biophysics ,Molecule ,lcsh:Q ,Tumor Suppressor Protein p53 ,lcsh:Science ,Fluorescence anisotropy ,Research Article ,Protein Binding - Abstract
Small molecule nonpeptidic mimics of α-helices are widely recognised as protein-protein interaction (PPIs) inhibitors. Protein-protein interactions mediate virtually all important regulatory pathways in a cell, and the ability to control and modulate PPIs is therefore of great significance to basic biology, where controlled disruption of protein networks is key to understanding network connectivity and function. We have designed and synthesised two series of 2,6,9-substituted 8-triazolylpurines as α-helix mimetics. The first series was designed based on low energy conformations but did not display any biological activity in a biochemical fluorescence polarisation assay targeting MDM2/p53. Although solution NMR conformation studies demonstrated that such molecules could mimic the topography of an α-helix, docking studies indicated that the same compounds were not optimal as inhibitors for the MDM2/p53 interaction. A new series of 8-triazolylpurines was designed based on a combination of docking studies and analysis of recently published inhibitors. The best compound displayed low micromolar inhibitory activity towards MDM2/p53 in a biochemical fluorescence polarisation assay. In order to evaluate the applicability of these compounds as biologically active and intrinsically fluorescent probes, their absorption/emission properties were measured. The compounds display fluorescent properties with quantum yields up to 50%.
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- 2015
55. Energy and Photoinduced Electron Transfer in a Wheel-Shaped Artificial Photosynthetic Antenna-Reaction Center Complex
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Gerdenis Kodis, Devens Gust, Vikas Garg, A. L. Moore, Paul A. Liddell, Joakim Andréasson, Yuichi Terazono, Thomas A. Moore, and Michael Hambourger
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Anthracenes ,Photosynthetic reaction centre ,Physics::Biological Physics ,Porphyrins ,Photochemistry ,Photosynthetic Reaction Center Complex Proteins ,Quantum yield ,Electrons ,General Chemistry ,Electron ,Chromophore ,Biochemistry ,Porphyrin ,Catalysis ,Photoinduced electron transfer ,Kinetics ,chemistry.chemical_compound ,Electron transfer ,Colloid and Surface Chemistry ,chemistry ,Biomimetic Materials ,Spectrophotometry, Ultraviolet ,Hexaphenylbenzene - Abstract
Functional mimics of a photosynthetic antenna-reaction center complex comprising five bis(phenylethynyl)anthracene antenna moieties and a porphyrin-fullerene dyad organized by a central hexaphenylbenzene core have been prepared and studied spectroscopically. The molecules successfully integrate singlet-singlet energy transfer and photoinduced electron transfer. Energy transfer from the five antennas to the porphyrin occurs on the picosecond time scale with a quantum yield of 1.0. Comparisons with model compounds and theory suggest that the Förster mechanism plays a major role in the extremely rapid energy transfer, which occurs at rates comparable to those seen in some photosynthetic antenna systems. A through-bond, electron exchange mechanism also contributes. The porphyrin first excited singlet state donates an electron to the attached fullerene to yield a P(*+)-C(60)(*-) charge-separated state, which has a lifetime of several nanoseconds. The quantum yield of charge separation based on light absorbed by the antenna chromophores is 80% for the free base molecule and 96% for the zinc analogue.
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- 2006
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56. Molecular AND and INHIBIT Gates Based on Control of Porphyrin Fluorescence by Photochromes
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Devens Gust, Joakim Andréasson, Stephen D. Straight, Ana L. Moore, Reginald H. Mitchell, Thomas A. Moore, Gerdenis Kodis, and Subhajit Bandyopadhyay
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Chemistry ,Molecular electronics ,Quantum yield ,General Chemistry ,Photochemistry ,Biochemistry ,Fluorescence ,Porphyrin ,Catalysis ,Fluorescence spectroscopy ,Photoinduced electron transfer ,chemistry.chemical_compound ,Colloid and Surface Chemistry ,Covalent bond ,Isomerization - Abstract
A molecular triad consisting of a porphyrin (P) covalently linked to two photochromes-one from the dihydroindolizine family (DHI) and one from the dihydropyrene family (DHP)-has been synthesized and found to act as either a molecular AND logic gate or an INHIBIT gate, depending on the inputs and initial state of the photochromes. The basis of these functions is quenching of porphyrin fluorescence (output of the gates) by the photochromes. The spiro form of DHI does not quench porphyrin fluorescence, whereas its betaine isomer strongly quenches by photoinduced electron transfer. DHP also quenches porphyrin fluorescence, but its cyclophanediene isomer does not. The triad has been designed using suitable energetics and electronic interactions, so that although these quenching phenomena may be observed, independent isomerization of the attached photochromes still occurs. This makes it possible to switch porphyrin fluorescence on or off by isomerization of the photochromes using various combinations of inputs such as UV light, red light, and heat.
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- 2005
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57. Switching of a photochromic molecule on gold electrodes: single-molecule measurements
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Stuart Lindsay, Paul A. Liddell, Stephen D. Straight, Jun Li, Jin He, Devens Gust, Ana L. Moore, Otto F. Sankey, Fan Chen, Thomas A. Moore, and Joakim Andréasson
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Materials science ,Photoisomerization ,Mechanical Engineering ,Analytical chemistry ,Dithiol ,Bioengineering ,General Chemistry ,Molecular physics ,chemistry.chemical_compound ,Photochromism ,chemistry ,Mechanics of Materials ,Ab initio quantum chemistry methods ,Molecule ,General Materials Science ,Electrical and Electronic Engineering ,Break junction ,Spectroscopy ,Isomerization - Abstract
We have studied the electronic changes caused by light-induced isomerization of a photochromic molecule between an open state (that absorbs in the UV to become closed) and a closed state (that absorbs in the visible to become open). Data obtained using a newly developed repetitive break junction method are interpreted in terms of single-molecule resistances of 526 +/- 90 M Omega in the open form and 4 +/- 1 M Omega in the closed form when the molecule is bound between two gold contacts via dithiol linkages. The corresponding ratio of open to closed resistance is in close agreement with the results of ab initio calculations, though the measured resistances are about half of the calculated values. Optical spectroscopy indicates that the photoisomerization occurs in both directions on small gold particles, evaporated thin gold films, and in the break junction experiments.
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- 2005
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58. Triplet Photophysics of Gold(III) Porphyrins
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Jerker Mårtensson, Thomas Ljungdahl, Mattias P. Eng, Bo Albinsson, and Joakim Andréasson
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Porphyrins ,Light ,Molecular Structure ,Metalloporphyrins ,Photochemistry ,Chemistry ,Temperature ,Chromophore ,Photoinduced electron transfer ,Dark state ,Singlet fission ,Quantum Theory ,Singlet state ,Emission spectrum ,Physical and Theoretical Chemistry ,Triplet state ,Ground state ,Organogold Compounds - Abstract
Gold porphyrins are often used as electron-accepting chromophores in donor-acceptor complexes for the study of photoinduced electron transfer, and they can also be involved in triplet-triplet energy-transfer interactions with other chromophores. Since the lowest excited singlet state is very short-lived (240 fs), the triplet state is usually the starting point for the transfer reactions, and it is therefore crucial to understand its photophysics. The triplet state of various gold porphyrins has been reported to have a lifetime of around 1.5 ns at room temperature and to have a biexponential decay both in emission and in transient absorption with decay times of around 10 and 100 micros at 80 K. In this paper, the triplet photophysics of two gold porphyrins (Au(III) 5,15-bis(3,5-di-tert-butylphenyl)-2,8,12,18-tetraethyl-3,7,13,17-tetramethylporphyrin and Au(III) 5,10,15,20-tetra(3,5-di-tert-butylphenyl)porphyrin) are studied by steady-state and time-resolved absorption and emission spectroscopy over a wide temperature range (4-300 K). The study reveals the existence of a dark state with an approximate lifetime of 50 ns, which was not previously observed. This state acts as an intermediate between the short-lived singlet and the triplet state manifold. In addition, we present DFT calculations, in which the core electrons of the central metal were replaced by a pseudopotential to account for the relativistic effects, which suggest that the lowest excited singlet state is an optically forbidden ligand-to-metal charge-transfer (LMCT) state. This LMCT state is an obvious candidate for the experimentally observed dark state, and it is shown to dictate the photophysical properties of gold porphyrins by acting as a gate for triplet state formation versus direct return to the ground state.
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- 2005
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59. Photonic Switching of Photoinduced Electron Transfer in a Dihydropyrene−Porphyrin−Fullerene Molecular Triad
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Paul A. Liddell, Subhajit Bandyopadhyay, Linda de la Garza, Gerdenis Kodis, Devens Gust, Reginald H. Mitchell, Thomas A. Moore, Joakim Andréasson, and Ana L. Moore
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Fullerene ,Photoisomerization ,Fluorescence spectrometry ,Triad (anatomy) ,General Chemistry ,Photochemistry ,Biochemistry ,Porphyrin ,Catalysis ,Photoinduced electron transfer ,Electron transfer ,chemistry.chemical_compound ,Colloid and Surface Chemistry ,medicine.anatomical_structure ,chemistry ,medicine ,Moiety - Abstract
Photonic control of photoinduced electron transfer has been demonstrated in a dimethyldihydropyrene (DHP) porphyrin (P) fullerene (C(60)) molecular triad. In the DHP-P-C(60) form of the triad, excitation of the porphyrin moiety is followed by photoinduced electron transfer to give a DHP-P(*)(+)-C(60)(*)(-) charge-separated state, which evolves by a charge shift reaction to DHP(*)(+)-P-C(60)(*)(-). This final state has a lifetime of 2 micros and is formed in an overall yield of 94%. Visible (or=300 nm) irradiation of the triad leads to photoisomerization of the DHP moiety to the cyclophanediene (CPD). Excitation of the porphyrin moiety of CPD-P-C(60) produces a short-lived (10 ns) CPD-P(*)(+)-C(60)(*)(-) state, but charge shift to the CPD moiety does not occur, due to the relatively high oxidation potential of the CPD group. Long-lived charge separation is not observed. Irradiation of CPD-P-C(60) with UV (254 nm) light converts the triad back to the DHP form. Thermal interconversion of the DHP and CPD forms is very slow, photochemical cycling is facile, and in the absence of oxygen, many cycles may be performed without substantial degradation. Thus, light is used to switch long-lived photoinduced charge separation on or off. The principles demonstrated by the triad may be useful for the design of molecule-based optoelectronic systems.
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- 2004
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60. Photoinduced electron transfer in a symmetrical diporphyrin–fullerene triad
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Darius Kuciauskas, Gerdenis Kodis, Paul A. Liddell, Ana L. Moore, Joakim Andréasson, Devens Gust, and Thomas A. Moore
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chemistry.chemical_compound ,Electron transfer ,Fullerene ,Chemistry ,Excited state ,General Physics and Astronomy ,Quantum yield ,Electron donor ,Singlet state ,Physical and Theoretical Chemistry ,Photochemistry ,Porphyrin ,Photoinduced electron transfer - Abstract
Two triad molecules consisting of either two zinc, or two free-base porphyrins symmetrically joined to a fullerene via phenyleneethynylene-containing linkages have been synthesized, and their photochemistry investigated. In the zinc form of the triad, PZn–C60–PZn, excitation of a zinc porphyrin in 2-methyltetrahydrofuran solution is followed by photoinduced electron transfer to the fullerene with a time constant of 20 ps. The resulting PZn˙+–C60˙−–PZn charge-separated state is formed with a quantum yield of 98% and has a lifetime of 820 ps. The first excited singlet state of the free-base analog gives the P2H˙+–C60˙−–P2H charge-separated state with a time constant of 200 ps and a yield of 98%. The charge-separated state decays with a lifetime of 2.8 ns. The difference in the rates of photoinduced electron transfer is consistent with reaction in the normal region of the Marcus–Hush relationship of transfer rate and driving force, and charge recombination is consistent with Marcus–Hush inverted behavior. The presence of the two porphyrin electron donors in these triads enhances the absorption cross section for light collection, and the molecular framework employed could be used to prepare molecules with enhanced energy conversion or optoelectronic properties.
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- 2004
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61. Photoinduced Hole Transfer from the Triplet State in a Porphyrin-Based Donor−Bridge−Acceptor System
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Thomas Ljungdahl, Ana L. Moore, Joakim Andréasson, Bo Albinsson, Devens Gust, Thomas A. Moore, Gerdenis Kodis, and Jerker Mårtensson
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chemistry.chemical_compound ,chemistry ,Electron hole ,Electron ,Physical and Theoretical Chemistry ,Chromophore ,Conjugated system ,Triplet state ,Photochemistry ,Porphyrin ,Acceptor ,Excitation - Abstract
The triplet excited-state deactivation of a gold porphyrin (AuP) in porphyrin-based donor−bridge−acceptor (D−B−A) systems has been studied. The results from room temperature and 80 K measurements are presented. The primary objectives have been to investigate whether electrons/electron holes or excitation energy could be transferred from 3AuP to the appended zinc porphyrin (ZnP) in the dimers. As the bridging chromophores in our D−B−A systems separate the ZnP and AuP moieties by 19 A edge-to-edge, we do not expect a significant contribution to either electron or energy transfer from a direct (through space) exchange mechanism. This gives us the opportunity to scrutinize how the bridging chromophores influence the transfer reactions. The results show that quenching of 3AuP occurs with high efficiency in the dimers that are connected by fully conjugated bridging chromophores, whereas no quenching is observed when the conjugation of the bridge is broken. We also observed that the decay of 3AuP is complex at t...
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- 2003
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62. Reversible Energy-Transfer Switching on a DNA Scaffold
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Magnus Å. Bälter, Nittaya Gale, Joakim Andréasson, Martin Hammarson, Shiming Li, Patricia Remón, and Tom Brown
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Models, Molecular ,02 engineering and technology ,010402 general chemistry ,Photochemistry ,01 natural sciences ,Biochemistry ,Catalysis ,chemistry.chemical_compound ,Photochromism ,Colloid and Surface Chemistry ,Fluorescence Resonance Energy Transfer ,Merocyanine ,A-DNA ,Fluorescent Dyes ,Spiropyran ,Quenching (fluorescence) ,Base Sequence ,Communication ,General Chemistry ,DNA ,021001 nanoscience & nanotechnology ,0104 chemical sciences ,Förster resonance energy transfer ,chemistry ,Excited state ,Chemical Sciences ,Nucleic Acid Conformation ,0210 nano-technology ,Isomerization - Abstract
We show that FRET between Pacific Blue (PB) and Alexa488 (A488) covalently attached to a DNA scaffold can be reversibly controlled by photochromic switching of a spiropyran derivative. With the spiropyran in the closed spiro isomeric form, FRET occurs freely between PB and A488. UV-induced isomerization to the open merocyanine form shuts down the FRET process by efficient quenching of the PB excited state. The process is reversed by exposure to visible light, triggering the isomerization to the spiro isomer.
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- 2015
63. Sterically Induced Conformational Relaxation and Structure of meso-Diaryloctaalkyl Porphyrins in the Excited Triplet State: Experimental and DFT Studies
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Jerker Mårtensson, Alexander Kyrychenko, Joakim Andréasson, and Bo Albinsson
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Steric effects ,Chemistry ,Relaxation (NMR) ,Photochemistry ,Surfaces, Coatings and Films ,Crystallography ,Excited state ,Potential energy surface ,Materials Chemistry ,Density functional theory ,Physical and Theoretical Chemistry ,Triplet state ,Ground state ,Conformational isomerism - Abstract
The excited triplet state conformations of zinc and free base 5,15-diaryloctaalkylporhyrins are studied by experimental and computational (density functional theory, DFT) methods. From the observations of an unusual triplet state dynamics, i.e., fast nonradiative and biexponential decay, it has been suggested that these porphyrins exist in two distinguishable conformers in the lowest excited triplet state. X-ray crystallography and DFT (B3LYP/6-31G(d)) optimization of the ground state show that the porphyrins are planar prior to excitation. However, in the excited triplet state, the planar structure relaxes to an out-of-plane distorted saddle-shaped conformer. This distorted conformer and the lowest triplet potential energy surface are characterized by DFT calculations. It is suggested that the conformational relaxation explains the unusual triplet dynamics of this class of porphyrins.
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- 2002
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64. Molecules with a sense of logic: a progress report
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Uwe Pischel and Joakim Andréasson
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Sequential logic ,Record locking ,Computer architecture ,Computer science ,Concatenation ,Information processing ,Keypad ,Nanotechnology ,Toffoli gate ,General Chemistry ,Realization (systems) ,Field (computer science) ,Hardware_LOGICDESIGN - Abstract
In this tutorial review, the most recent developments in the field of molecular logic and information processing are discussed. Special emphasis is given to the report of progress in the concatenation of molecular logic devices and switches, the design of memory systems working according to the principles of sequential logic, the mimicking of transistors, and the research on photochromic platforms with an unprecedented degree of functional integration. Furthermore, a series of achievements that add up to the conceptual diversity of molecular logic is introduced, such as the realization of highly complex and logically reversible Toffoli and Fredkin gates by the action of DNAzymes or the use of a multifluorophoric platform as a viable approach towards keypad lock functions.
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- 2014
65. An all-photonic molecule-based parity generator/checker for error detection in data transmission
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Joakim Andréasson, Uwe Pischel, Jesper R. Nilsson, Shiming Li, and Magnus Å. Bälter
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business.industry ,Chemistry ,Photochemistry ,Radiation Chemistry ,Communication ,Parity (physics) ,02 engineering and technology ,General Chemistry ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Topology ,01 natural sciences ,Biochemistry ,Physical Chemistry ,Catalysis ,3. Good health ,0104 chemical sciences ,Colloid and Surface Chemistry ,Molecule ,Photonics ,0210 nano-technology ,business ,Error detection and correction ,Fluorescence response ,Data transmission - Abstract
The function of a parity generator/checker, which is an essential operation for detecting errors in data transmission, has been realized with multiphotochromic switches by taking advantage of a neuron-like fluorescence response and reversible light-induced transformations between the implicated isomers.
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- 2013
66. Interactions of a photochromic spiropyran with liposome model membranes
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Joakim Andréasson, Fabian Jonsson, Tamás Beke-Somfai, and Bengt Nordén
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Indoles ,02 engineering and technology ,010402 general chemistry ,Linear dichroism ,Photochemistry ,01 natural sciences ,chemistry.chemical_compound ,Photochromism ,Electrochemistry ,General Materials Science ,Benzopyrans ,Spectroscopy ,Spiropyran ,Liposome ,Photoswitch ,Spectrum Analysis ,Membranes, Artificial ,Surfaces and Interfaces ,Models, Theoretical ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,Nitro Compounds ,0104 chemical sciences ,Membrane ,chemistry ,Liposomes ,Absorption (chemistry) ,0210 nano-technology ,Isomerization - Abstract
The interactions between anionic or zwitterionic liposomes and a water-soluble, DNA-binding photochromic spiropyran are studied using UV/vis absorption and linear dichroism (LD) spectroscopy. The spectral characteristics as well as the kinetics of the thermal isomerization process in the absence and presence of the two different liposome types provide information about the environment and whether or not the spiropyran resides in the liposome membrane. By measuring LD on liposomes deformed and aligned by shear flow, further insight is obtained about interaction and binding geometry of the spiropyran at the lipid membranes. We show that the membrane interactions differ between the two types of liposomes used as well as the isomeric forms of the spiropyran photoswitch.
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- 2013
67. Enantioselective Cyclization of Photochromic Dithienylethenes Bound to DNA
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Vilhelm Müller, Shiming Li, Tamara C. S. Pace, Joakim Andréasson, and Per Lincoln
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Supramolecular chemistry ,Stereoisomerism ,010402 general chemistry ,Photochemistry ,01 natural sciences ,Catalysis ,supramolecular chemistry ,Photochromism ,chemistry.chemical_compound ,enantioselectivity ,Molecule ,heterocycles ,Molecular Structure ,010405 organic chemistry ,Enantioselective synthesis ,General Medicine ,General Chemistry ,DNA ,Ethylenes ,Photochemical Processes ,photochromism ,Combinatorial chemistry ,0104 chemical sciences ,chemistry ,Cyclization ,Chemical Sciences ,Isomerization - Abstract
Guiding light: Enantioselectivity is obtained for the photocyclization of a photochromic dithienylethene when isomerization is carried out in the presence of DNA (see scheme). Copyright © 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.
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- 2013
68. Switching properties of a spiropyran-cucurbit[7]uril supramolecular assembly: Usefulness of the anchor approach
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Joakim Andréasson, José Paulo da Silva, Cátia Parente Carvalho, Uwe Pischel, Jesper R. Nilsson, and Shiming Li
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Bridged-Ring Compounds ,aqueous-solution ,Indoles ,Light ,Electrospray ionization ,shifts ,pk(a) ,010402 general chemistry ,Photochemistry ,01 natural sciences ,Supramolecular assembly ,chemistry.chemical_compound ,Photochromism ,energy-transfer ,Isomerism ,Cucurbituril ,host-guest chemistry ,Benzopyrans ,Merocyanine ,Physical and Theoretical Chemistry ,Coloring Agents ,Host–guest chemistry ,molecular switches ,Spiropyran ,Molecular switch ,complexes ,010405 organic chemistry ,cucurbiturils ,Hydrolysis ,lock-in detection ,Imidazoles ,photoswitchable nanoparticles ,Nitro Compounds ,photochromism ,Atomic and Molecular Physics, and Optics ,0104 chemical sciences ,drug-delivery ,chemistry ,hydrolysis ,acidochromism ,Chemical Sciences ,fluorescent dye - Abstract
A nitrospiropyran, which was modified with a cadaverine-derived anchor, was investigated with respect to its thermally induced isomerizations, hydrolytic stability of the merocyanine form, and photochromic ring closure. The host-guest complexation of the anchor by the cucurbit[7]uril macrocycle, evidenced by absorption titration, NMR spectroscopy, and electrospray ionization mass spectrometry, produced significant improvements of the switching properties of the photochrome: 1) appearance of the merocyanine form about 70 times faster, 2) practically unlimited hydrolytic stability of the merocyanine (two and a half days without any measureable decay), and 3) fast, clean, and fatigue-resistant photoinduced ring closure back to the spiro form. The importance of an adequate molecular design of the anchor was demonstrated by including control experiments with spiropyrans with a shorter linker or without such structural asset.
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- 2012
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69. ChemInform Abstract: Data and Signal Processing Using Photochromic Molecules
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Devens Gust, Uwe Pischel, Thomas A. Moore, Joakim Andréasson, and Ana L. Moore
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Bistability ,business.industry ,Chemistry ,Amplifier ,Transistor ,General Medicine ,Chromophore ,law.invention ,Photochromism ,Analog signal ,law ,Modulation ,Optoelectronics ,Physics::Chemical Physics ,Photonics ,business - Abstract
Photochromes are chromophores that are reversibly isomerized between two metastable forms using light, or light and heat. When photochromes are covalently linked to other chromophores, they can act as molecular photonic analogues of electronic transistors. As bistable switches, they can be incorporated into the design of molecules capable of binary arithmetic and both combinatorial and sequential digital logic operations. Small ensembles of such molecules can perform analogue signal modulation similar to that carried out by transistor amplifiers. Examples of molecules that perform multiple logic functions, act as control elements for fluorescent reporters, and mimic natural photoregulatory functions are presented.
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- 2012
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70. Molecular Logic Based on Optical Signaling
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Uwe Pischel and Joakim Andréasson
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- 2012
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71. Light-induced cytotoxicity of a photochromic spiropyran
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Björn Önfelt, Jesper R. Nilsson, Shiming Li, and Joakim Andréasson
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Indoles ,Light ,Color ,010402 general chemistry ,Photochemistry ,01 natural sciences ,Catalysis ,Photochromism ,chemistry.chemical_compound ,photocontrol ,Materials Chemistry ,Humans ,Benzopyrans ,Cytotoxicity ,Spiropyran ,Photosensitizing Agents ,Photoswitch ,010405 organic chemistry ,Chemistry ,lock-in detection ,Cell Membrane ,Metals and Alloys ,apoptosis ,Biological Transport ,General Chemistry ,Nitro Compounds ,Fluorescence ,proteins ,switch ,3. Good health ,0104 chemical sciences ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,Water soluble ,HEK293 Cells ,Chemical Sciences ,Ceramics and Composites ,Light induced ,nanoparticles ,fluorescence ,living cells - Abstract
In this work we present a novel water soluble spiropyran photoswitch that can be photonically activated inside live cells from a form that has no significant effect on the cellular survival to a form that induces a dramatic toxic response.
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- 2011
72. Molecular implementation of sequential and reversible logic through photochromic energy transfer switching
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Joakim Andréasson, Uwe Pischel, Shiming Li, Axel Kahnt, Patricia Remón, and Martin Hammarson
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spiro compounds ,010402 general chemistry ,Photochemistry ,01 natural sciences ,Physical Chemistry ,Catalysis ,Photochromism ,chemistry.chemical_compound ,Merocyanine ,Spiropyran ,energy transfer ,Sequential logic ,010405 organic chemistry ,business.industry ,Chemistry ,Organic Chemistry ,General Chemistry ,photochromism ,Acceptor ,0104 chemical sciences ,switches ,Logic gate ,logic gates ,Optoelectronics ,Photonics ,business ,Perylene - Abstract
Photochromic spiropyrans modified with fluorophores were investigated as molecular platforms for the achievement of fluorescence switching through modulation of energy transfer. The dyads were designed in such a way that energy transfer is only observed for the open forms of the photochrome (merocyanine and protonated merocyanine), whereas the closed spiropyran is inactive as an energy acceptor. This was made possible through a deliberate choice of fluorophores (4-amino-1,8-naphthalimide, dansyl, and perylene) that produce zero spectral overlap with the spiro form and considerable overlap for the merocyanine forms. From the Forster theory, energy transfer is predicted to be highly efficient and in some cases of 100 % efficiency. The combined switching by photonic (light of λ>530 nm) and chemical (base) inputs enabled the creation of a sequential logic device, which is the basic element of a keypad lock. Furthermore, in combination with an anthracene-based acidochromic fluorescence switch, a reversible logic device was designed. This enables the unambiguous coding of different input combinations through multicolour fluorescence signalling. All devices can be conveniently reset to their initial states and repeatedly cycled.
- Published
- 2011
73. All-Photonic Multifunctional Molecular Logic Device
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Uwe Pischel, Stephen D. Straight, Ana L. Moore, Devens Gust, Thomas A. Moore, and Joakim Andréasson
- Subjects
Demultiplexer ,Bistability ,Nanotechnology ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Multiplexer ,Catalysis ,Article ,operations ,memory ,Colloid and Surface Chemistry ,platform ,subtractor ,Subtractor ,gates ,fluorescent-switch ,complexes ,010405 organic chemistry ,business.industry ,Chemistry ,communication ,encoder-decoder ,General Chemistry ,0104 chemical sciences ,Logic gate ,Chemical Sciences ,keypad lock ,Optoelectronics ,State (computer science) ,business ,Encoder ,AND gate ,Hardware_LOGICDESIGN - Abstract
Photochromes are photoswitchable, bistable chromophores which, like transistors, can implement binary logic operations. When several photochromes are combined in one molecule, interactions between them such as energy and electron transfer allow design of simple Boolean logic gates and more complex logic devices with all-photonic inputs and outputs. Selective isomerization of individual photochromes can be achieved using light of different wavelengths, and logic outputs can employ absorption and emission properties at different wavelengths, thus allowing a single molecular species to perform several different functions, even simultaneously. Here, we report a molecule consisting of three linked photochromes that can be configured as AND, XOR, INH, half-adder, half-subtractor, multiplexer, demultiplexer, encoder, decoder, keypad lock, and logically reversible transfer gate logic devices, all with a common initial state. The system demonstrates the advantages of light-responsive molecules as multifunctional, reconfigurable nanoscale logic devices that represent an approach to true molecular information processing units.
- Published
- 2011
74. OFF-ON-OFF Fluorescence Switch with T-Latch Function
- Author
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Patricia Remón, Ezequiel Perez-Inestrosa, Uwe Pischel, Joakim Andréasson, Vânia F. Pais, and Daniel Collado
- Subjects
Letter ,ComputingMethodologies_SIMULATIONANDMODELING ,ComputingMethodologies_IMAGEPROCESSINGANDCOMPUTERVISION ,Nanotechnology ,system ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Photoinduced electron transfer ,operations ,photoinduced electron-transfer ,memory ,subtractor ,Subtractor ,Physical and Theoretical Chemistry ,implementation ,010405 organic chemistry ,business.industry ,Chemistry ,Organic Chemistry ,Function (mathematics) ,Fluorescence ,0104 chemical sciences ,elements ,ComputingMethodologies_PATTERNRECOGNITION ,Chemical Sciences ,molecular keypad lock ,Optoelectronics ,activation ,reversible logic ,business - Abstract
A novel molecular system with characteristics of an OFF-ON-OFF fluorescence switch was designed to integrate the function of a T-latch. In detail, a receptor(1)-fluorophore-receptor(2) architecture was adopted to achieve fluorescence switching upon addition of protons.
- Published
- 2011
75. Molecular AND-logic for dually controlled activation of a DNA-binding spiropyran
- Author
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Per Lincoln, Joakim Andréasson, Shiming Li, Martin Hammarson, and Johanna Andersson
- Subjects
Models, Molecular ,Indoles ,Ultraviolet Rays ,Intercalation (chemistry) ,light-activation ,Antineoplastic Agents ,010402 general chemistry ,Photochemistry ,01 natural sciences ,Physical Chemistry ,Catalysis ,Photochromism ,chemistry.chemical_compound ,DNA-binding ,Materials Chemistry ,molecular logic ,A-DNA ,Benzopyrans ,Binding site ,Spiropyran ,DNA recognition ,Binding Sites ,Photoswitch ,010405 organic chemistry ,Metals and Alloys ,General Chemistry ,DNA ,photochromism ,Nitro Compounds ,Combinatorial chemistry ,Intercalating Agents ,0104 chemical sciences ,3. Good health ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,chemistry ,Ceramics and Composites ,AND gate - Abstract
A spiropyran photoswitch is activated using UV light and protons from a form that shows no interaction with DNA to a form that binds to DNA by intercalation. This scheme is interpreted as a biologically relevant logic AND gate with potential applications as a dually controlled anticancer drug.
- Published
- 2010
76. ChemInform Abstract: Smart Molecules at Work - Mimicking Advanced Logic Operations
- Author
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Joakim Andréasson and Uwe Pischel
- Subjects
symbols.namesake ,Adder ,Sequential logic ,Computer architecture ,Chemistry ,symbols ,Keypad ,General Medicine ,Basis (universal algebra) ,Multiplexer ,Encoder ,Field (computer science) ,Boolean algebra - Abstract
Molecular logic is an interdisciplinary research field, which has captured worldwide interest. This tutorial review gives a brief introduction into molecular logic and Boolean algebra. This serves as the basis for a discussion of the state-of-the-art and future challenges in the field. Representative examples from the most recent literature including adders/subtractors, multiplexers/demultiplexers, encoders/decoders, and sequential logic devices (keypad locks) are highlighted. Other horizons, such as the utility of molecular logic in bio-related applications, are discussed as well.
- Published
- 2010
- Full Text
- View/download PDF
77. Photochromic supramolecular memory with nondestructive readout
- Author
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Shiming Li, Martin Hammarson, Bo Albinsson, Harry L. Anderson, Joakim Kärnbratt, and Joakim Andréasson
- Subjects
optical readout ,010405 organic chemistry ,business.industry ,Dimer ,Supramolecular chemistry ,porphyrinoids ,Nanotechnology ,General Medicine ,General Chemistry ,photochromism ,010402 general chemistry ,Physical Chemistry ,01 natural sciences ,Porphyrin ,supramolecular chemistry ,Catalysis ,0104 chemical sciences ,Photochromism ,chemistry.chemical_compound ,molecular devices ,chemistry ,Optoelectronics ,business ,Absorption (electromagnetic radiation) ,Isomerization - Abstract
Looking without touching: The light-controlled isomerization of a complex containing a pyridine-appended dithienylethene (DTE; green) and a porphyrin dimer induces dramatic structural and spectral changes (see picture). These changes are monitored In a region outside the photochromically active absorption bands of DTE, therefore allowing a nondestructive readout so that the process functions as a molecular optically controlled memory. (Figure Presented) © 2010 Wiley-VCH Verlag GmbH and Co. KGaA www.angewandte.org.
- Published
- 2010
78. Smart molecules at work--mimicking advanced logic operations
- Author
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Joakim Andréasson and Uwe Pischel
- Subjects
Computer science ,fluorescent switch ,Nanotechnology ,010402 general chemistry ,01 natural sciences ,Multiplexer ,Boolean algebra ,adder ,symbols.namesake ,subtractor ,gates ,Combinational logic ,Sequential logic ,010405 organic chemistry ,Logic family ,General Chemistry ,states ,0104 chemical sciences ,elements ,Logic synthesis ,Computer architecture ,Logic gate ,Chemical Sciences ,keypad lock ,symbols ,systems ,Keypad ,single-molecule - Abstract
Molecular logic is an interdisciplinary research field, which has captured worldwide interest. This tutorial review gives a brief introduction into molecular logic and Boolean algebra. This serves as the basis for a discussion of the state-of-the-art and future challenges in the field. Representative examples from the most recent literature including adders/subtractors, multiplexers/demultiplexers, encoders/decoders, and sequential logic devices (keypad locks) are highlighted. Other horizons, such as the utility of molecular logic in bio-related applications, are discussed as well.
- Published
- 2009
79. An all-photonic molecular keypad lock
- Author
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Joakim Andréasson, Ana L. Moore, Devens Gust, Thomas A. Moore, and Stephen D. Straight
- Subjects
Record locking ,Demultiplexer ,demultiplexer ,porphyrinoids ,010402 general chemistry ,Photochemistry ,01 natural sciences ,Signal ,Physical Chemistry ,Catalysis ,molecular devices ,circuits ,chromophores ,Electronic circuit ,photochemistry ,010405 organic chemistry ,business.industry ,Chemistry ,Organic Chemistry ,General Chemistry ,photochromism ,0104 chemical sciences ,switches ,Logic gate ,Chemical Sciences ,logic gates ,Optoelectronics ,Keypad ,Photonics ,business ,Reset (computing) - Abstract
An all photonic molecular keypad lock with a reset capacity, that is capable of distinguishing one two-digit code out of eight possible combinations were described. The synthesis and characterization of triad 1 with distilled 2-methyltetrahydrofuran as the solvent for spectroscopic measurement were reported, where the samples were degassed by size freeze-pump-thaw cycles to a final pressure. The functional principle of a keypad lock is that it gives an output signal only when given the correct inputs in the correct order, also the capacity of the triad to perform as a two-input PAND gate with reset capacity are considered. The keypad lock is found to be operated by five optical signals in the UV region including fluorescence emission that signals the actual opening of the lock, which can also be used numerous times without ant photodegradation affecting the performance.
- Published
- 2009
80. Molecular all-photonic encoder-decoder
- Author
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Joakim Andréasson, Ana L. Moore, Thomas A. Moore, Devens Gust, and Stephen D. Straight
- Subjects
Data processing ,business.industry ,Chemistry ,General Chemistry ,Tracking (particle physics) ,Biochemistry ,Catalysis ,Absorbance ,Wavelength ,Colloid and Surface Chemistry ,Optics ,Transmission (telecommunications) ,Transmittance ,Optoelectronics ,Photonics ,business ,Encoder - Abstract
In data processing, an encoder can compress digital information for transmission or storage, whereas a decoder recovers the information in its original form. We report a molecular triad consisting of a dithienylethene covalently linked to two fulgimide photochromes that performs as an all-photonic single-bit 4-to-2 encoder and 2-to-4 decoder. The encoder compresses the information contained in the four inputs into two outputs. The inputs are light of four different wavelengths that photoisomerize the fulgimide, dithienylethene, or both. The outputs are absorbance at two wavelengths. The two decoder inputs are excitation at two wavelengths, whereas the four outputs, which recover the information compressed into the inputs, are absorbance at two wavelengths, transmittance at one wavelength, and fluorescence emission. The molecule can be cycled through numerous encoder and decoder functions without significant photodecomposition. Molecular photonic encoders and decoders could potentially be used for labeling and tracking of nano- and microscale objects as well as for data manipulation.
- Published
- 2008
81. Electrical detection of amine ligation to a metalloporphyrin via a hybrid SOI-MOSFET
- Author
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Devens Gust, Bharath R. Takulapalli, Trevor Thornton, Zach Erno, Paul A. Liddell, Gez M. Laws, and Joakim Andréasson
- Subjects
Models, Molecular ,Silicon ,Light ,Metalloporphyrins ,Pyridines ,Inorganic chemistry ,Photochemistry ,Electrochemistry ,Biochemistry ,Catalysis ,law.invention ,chemistry.chemical_compound ,Colloid and Surface Chemistry ,Piperidines ,law ,Monolayer ,Work function ,Amines ,Transistor ,Free base ,Oxides ,General Chemistry ,Hydrogen-Ion Concentration ,Porphyrin ,Kinetics ,Zinc ,chemistry ,Semiconductors ,Field-effect transistor ,Amine gas treating ,Volatilization - Abstract
A close-packed monolayer of zinc 5,10,15,20-tetrakis(3-carboxyphenyl)porphyrin has been prepared and deposited on the thin native oxide covering the surface of an SOI-MOSFET (silicon-on-insulator metal-oxide-semiconductor field effect transistor) using Langmuir-Blodgett techniques. When the device is exposed to amine vapors in a nitrogen atmosphere, the amine coordinates to the zinc atom. The resulting change in electron distribution within the porphyrin leads to a large change in the drain current of the transistor, biased via a back gate. This change is sensitive to both the amount of amine present and the base strength of the amine. Only very small changes in drain current were observed with a monolayer of free base porphyrin or palmitic acid. After exposure to high pyridine concentrations, the device response saturates, but partially recovers after overnight exposure to flowing nitrogen gas. Interestingly, the device response is instantaneously reset by exposure to visible light, suggesting that photode-ligation occurs. An electrical model for the hybrid device that describes its response to ligand binding in terms of a change in the work function of the porphyrin monolayer has been developed. A transistor response to a few hundred attomoles of bound pyridine can be readily detected. This extreme sensitivity, coupled with the ability to reset the device using light, suggests that such systems might be useful as sensors.
- Published
- 2008
82. Light controlled DNA-binding of spiropyrans
- Author
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Per Lincoln, Shiming Li, Johanna Andersson, and Joakim Andréasson
- Subjects
chemistry.chemical_compound ,chemistry ,Biophysics ,DNA - Published
- 2008
- Full Text
- View/download PDF
83. Molecular 2:1 digital multiplexer
- Author
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Stephen D. Straight, Devens Gust, Reginald H. Mitchell, Subhajit Bandyopadhyay, Thomas A. Moore, Joakim Andréasson, and Ana L. Moore
- Subjects
chemistry.chemical_compound ,Photochromism ,chemistry ,Logic gate ,Moiety ,General Chemistry ,Chromophore ,Green-light ,Photochemistry ,Porphyrin ,Multiplexer ,Fluorescence ,Catalysis - Abstract
(Chemical Equation Presented) Two into one: A porphyrin linked to two photochromic moieties performs as a 2:1 digital multiplexer (MUX). It takes heat and red light as the two inputs (in 1 and in 2), and a third switchable input (green light, sel) selects whether the output (porphyrin fluorescence) reports the state of in 1 or in 2. Each photochromic moiety may be independently photoisomerized to isomers that quench the porphyrin fluorescence. © 2007 Wiley-VCH Verlag GmbH & Co. KGaA.
- Published
- 2006
84. All-photonic molecular half-adder
- Author
-
Devens Gust, Choong Do Park, Bo Albinsson, Michael Hambourger, Joakim Andréasson, Thomas A. Moore, Gerdenis Kodis, Stephen D. Straight, Ana L. Moore, and Miguel Gervaldo
- Subjects
Spiropyran ,Adder ,Quenching (fluorescence) ,business.industry ,Binary number ,General Chemistry ,Function (mathematics) ,Photochemistry ,Biochemistry ,Catalysis ,chemistry.chemical_compound ,Photochromism ,Colloid and Surface Chemistry ,chemistry ,Optoelectronics ,Molecule ,Photonics ,business - Abstract
One molecule acts as both an AND and an XOR Boolean logic gate that share the same two photonic inputs. The molecule comprises a half-adder, adding two binary digits with only light as inputs and outputs, and consists of three covalently linked photochromic moieties, a spiropyran and two quinoline-derived dihydroindolizines. The AND function is based on the absorption properties of the molecule, whereas the XOR function is based on an off-on-off response of the fluorescence to the inputs that results from interchromophore excited-state quenching interactions. The half-adder is simple to operate and can be cycled many times.
- Published
- 2006
85. Molecular AND logic gate based on electric dichroism of a photochromic dihydroindolizine
- Author
-
Joakim Andréasson, Yuichi Terazono, Devens Gust, Ana L. Moore, Thomas A. Moore, and Bo Albinsson
- Subjects
Adder ,Time Factors ,Logic ,Photochemistry ,Ultraviolet Rays ,Molecular Conformation ,Linear dichroism ,Sensitivity and Specificity ,Catalysis ,Photochromism ,Nuclear magnetic resonance ,Isomerism ,Electric field ,Electrochemistry ,Molecular switch ,Photons ,business.industry ,Chemistry ,Circular Dichroism ,Indolizines ,General Chemistry ,General Medicine ,Dichroism ,Dipole ,Optoelectronics ,business ,AND gate - Abstract
(Chemical Equation Presented) Very ANDy: A photochromic molecular switch has been found to act as an AND Boolean logic gate. The switch takes as input both UV light, which causes photo-isomerization of a dihydroindolizine to an open, dipolar form, and an electric field, which aligns this isomer in solution (see scheme). The output of the gate is read as the electric linear dichroism response of the open isomer. The gate can be reset with visible light. © 2005 Wiley-VCH Verlag GmbH & Co. KGaA.
- Published
- 2005
86. Temperature and viscosity dependence of the triplet energy transfer process in porphyrin dimers
- Author
-
Jerker Mårtensson, Joakim Andréasson, Alexander Kyrychenko, and Bo Albinsson
- Subjects
chemistry.chemical_compound ,Reaction rate constant ,chemistry ,Covalent bond ,Superexchange ,Ultrafast laser spectroscopy ,Free base ,Physical and Theoretical Chemistry ,Chromophore ,Photochemistry ,Porphyrin ,Acceptor - Abstract
The temperature and viscosity dependence of the triplet energy transfer (TET) process in porphyrin dimers has been studied. A zinc porphyrin (donor) and a free base porphyrin (acceptor) are covalently linked together by rigid bridging chromophores at a center-center distance of 25 A. Due to the large donor-acceptor distance and the weakness of the spin forbidden transitions involved, neither direct (through space) electron exchange nor Coulombic mechanisms are expected to contribute to the observed TET process. The results from transient absorption measurements at temperatures between room temperature and 80 K show that TET occurs with unexpectedly high efficiency in the systems connected by fully conjugated bridges and a pronounced temperature dependence of the process is observed. Comparison of the TET efficiencies in dimers connected by different bridging chromophores correlates well with a transfer reaction governed by a through bond exchange (superexchange) interaction. However, in high viscosity media the TET process is dramatically slowed down. This is attributed to a conformational gating of the TET process where the electronic coupling varies strongly with the relative orientation of the donor and the bridging chromophore. Further, the zinc porphyrin donor offers two distinct donor species, T(1A) and T(1B). At room temperature, the TET rate constant of the T(1A) species is about two orders of magnitude larger than for the T(1B) species. The dimers studied are well suited model systems for materials where the rate of the transfer reactions can be changed by external stimuli.
- Published
- 2003
87. The gold porphyrin first excited singlet state
- Author
-
Devens Gust, Jerker Mårtensson, Bo Albinsson, Gerdenis Kodis, Su Lin, Joakim Andréasson, Thomas A. Moore, and Ana L. Moore
- Subjects
Porphyrins ,Chemistry ,Diradical ,Photochemistry ,General Medicine ,Biochemistry ,Models, Biological ,Photoinduced electron transfer ,Photobiology ,Electron Transport ,Intersystem crossing ,Excited state ,Singlet fission ,Singlet state ,Gold ,Physical and Theoretical Chemistry ,Triplet state ,Photosynthesis ,Ground state - Abstract
Gold porphyrins are often used as electron-accepting chromophores in artificial photosynthetic constructs. Because of the heavy atom effect, the gold porphyrin first-excited singlet state undergoes rapid intersystem crossing to form the triplet state. The lowest triplet state can undergo a reduction by electron donation from a nearby porphyrin or another moiety. In addition, it can be involved in triplet-triplet energy transfer interactions with other chromophores. In contrast, little has been known about the short-lived singlet excited state. In this work, ultrafast time-resolved absorption spectroscopy has been used to investigate the singlet excited state of Au(III) 5,15-bis(3,5-di-t-butylphenyl)-2,8,12,18,-tetraethyl-3,7,13,17-tetrameth ylporphyrin in ethanol solution. The excited singlet state is found to form with the laser pulse and decay with a time constant of 240 fs to give the triplet state. The triplet returns to the ground state with a lifetime of 400 ps. The lifetime of the singlet state is comparable with the time constants for energy and photoinduced electron transfer in some model and natural photosynthetic systems. Thus, it is kinetically competent to take part in such processes in suitably designed supermolecular systems.
- Published
- 2002
88. Photoswitched DNA-Binding of a Photochromic Spiropyran
- Author
-
Per Lincoln, Johanna Andersson, Shiming Li, and Joakim Andréasson
- Subjects
Indoles ,Photochemistry ,Intercalation (chemistry) ,010402 general chemistry ,medicine.disease_cause ,01 natural sciences ,Biochemistry ,Catalysis ,Dissociation (chemistry) ,Photochromism ,chemistry.chemical_compound ,Colloid and Surface Chemistry ,medicine ,Benzopyrans ,Open form ,Spiropyran ,010405 organic chemistry ,Chemistry ,DNA ,General Chemistry ,Nitro Compounds ,0104 chemical sciences ,Spectrophotometry, Ultraviolet ,Ultraviolet ,Visible spectrum - Abstract
The dramatically different DNA-binding properties of the two isomeric forms of a photochromic spiropyran have been demonstrated, enabling photoswitched DNA binding. The closed, UV-absorbing form shows no signs of interaction with DNA. Upon UV exposure the spiropyran is isomerized to the open form that binds to DNA by intercalation. The process is fully reversible as the corresponding dissociation process is induced by visible light.
- Published
- 2008
- Full Text
- View/download PDF
89. Molecule-Based Photonically Switched Half-Adder
- Author
-
Reginald H. Mitchell, Subhajit Bandyopadhyay, Devens Gust, Paul A. Liddell, Yuichi Terazono, Thomas A. Moore, Ana L. Moore, Joakim Andréasson, and Gerdenis Kodis
- Subjects
Adder ,Photoisomerization ,business.industry ,Stereochemistry ,Chemistry ,Binary number ,General Chemistry ,Laser ,Biochemistry ,Catalysis ,law.invention ,Photochromism ,Colloid and Surface Chemistry ,law ,Optoelectronics ,Hardware_ARITHMETICANDLOGICSTRUCTURES ,business ,XOR gate ,AND gate ,Hardware_LOGICDESIGN ,Photonic crystal - Abstract
A molecule-based binary half-adder with optical inputs and outputs has been demonstrated. The half-adder consists of two photochromic organic molecules in solution and a third-harmonic-generating crystal. One substance acts as an AND Boolean logic gate and the other as an XOR gate. Inputs are laser pulses at 1064 or 532 nm that initiate photoisomerization reactions. Outputs are the optical absorbance of a fullerene radical anion (AND gate) and fluorescence of a porphyrin (XOR gate). The system carries out binary addition based on the laser input pulses. Half-adders in combination are capable of carrying out all mathematical operations necessary for digital computing.
- Published
- 2004
- Full Text
- View/download PDF
90. A simplicity-guided approach toward molecular set–reset memories
- Author
-
Uwe Pischel and Joakim Andréasson
- Subjects
Bistability ,010405 organic chemistry ,Chemistry ,media_common.quotation_subject ,Nanotechnology ,General Chemistry ,010402 general chemistry ,01 natural sciences ,Catalysis ,0104 chemical sciences ,Set (abstract data type) ,Materials Chemistry ,Electronic engineering ,Simplicity ,Reset (computing) ,media_common - Abstract
Photochromic switches fulfill the general molecular design criteria for the surprisingly straightforward small-scale integration of seemingly complex set-reset latches. The implications of this re-interpretation are discussed with the example of a dithienylethene photochrome. The concept is shown to be valid for a multitude of well-introduced bistable switches with clearly differentiated output signals, e.g., optical signals for the presented example.
- Published
- 2010
- Full Text
- View/download PDF
91. Triplet Energy Transfer in Porphyrin Dimers: Comparison between π- and σ-Chromophore Bridged Systems
- Author
-
Jerker Mårtensson, Joakim Andréasson, Bo Albinsson, and Johan Kajanus
- Subjects
chemistry.chemical_compound ,Colloid and Surface Chemistry ,chemistry ,Energy transfer ,Pi ,Sigma ,General Chemistry ,Chromophore ,Photochemistry ,Biochemistry ,Porphyrin ,Catalysis - Published
- 2000
- Full Text
- View/download PDF
92. Photo-Switched DNA-Binding of a Photochromic Spiropyran
- Author
-
Shiming Li, Per Lincoln, Johanna Andersson, and Joakim Andréasson
- Subjects
Spiropyran ,Photochromism ,chemistry.chemical_compound ,chemistry ,Oligonucleotide ,chemistry.chemical_element ,Molecule ,General Medicine ,Prodrug ,Photochemistry ,Carbon ,DNA ,Visible spectrum - Published
- 2008
- Full Text
- View/download PDF
93. Switching of a photochromic molecule on gold electrodes: single-molecule measurements.
- Author
-
Jin He, Fan Chen, Paul A Liddell, Joakim Andréasson, Stephen D Straight, Devens Gust, Thomas A Moore, Ana L Moore, Jun Li, and Otto F Sankey and Stuart M Lindsay
- Subjects
DITHIOLE ,THIOLS ,ORGANOSULFUR compounds ,PHOTOISOMERIZATION - Abstract
We have studied the electronic changes caused by light-induced isomerization of a photochromic molecule between an open state (that absorbs in the UV to become closed) and a closed state (that absorbs in the visible to become open). Data obtained using a newly developed repetitive break junction method are interpreted in terms of single-molecule resistances of 526 ± 90 MΩ in the open form and 4 ± 1 MΩ in the closed form when the molecule is bound between two gold contacts via dithiol linkages. The corresponding ratio of open to closed resistance is in close agreement with the results of ab initio calculations, though the measured resistances are about half of the calculated values. Optical spectroscopy indicates that the photoisomerization occurs in both directions on small gold particles, evaporated thin gold films, and in the break junction experiments. http://stacks.iop.org/0957-4484/16/695 [ABSTRACT FROM AUTHOR]
- Published
- 2005
- Full Text
- View/download PDF
94. A Fluorescent Kinase Inhibitor that Exhibits Diagnostic Changes in Emission upon Binding
- Author
-
Joakim Andréasson, Tord Inghardt, Patrick A. Sandoz, Cassandra L. Fleming, Björn Önfelt, and Morten Grøtli
- Subjects
Fluorophore ,kinase ,solvatochromism ,010402 general chemistry ,Binding, Competitive ,01 natural sciences ,Catalysis ,Flow cytometry ,Jurkat Cells ,chemistry.chemical_compound ,Adenosine Triphosphate ,2-Naphthylamine ,inhibitors ,Microscopy ,medicine ,Humans ,Protein Kinase Inhibitors ,Fluorescent Dyes ,chemistry.chemical_classification ,Molecular Structure ,medicine.diagnostic_test ,010405 organic chemistry ,Kinase ,Communication ,Solvatochromism ,General Medicine ,General Chemistry ,Flow Cytometry ,EU-Horizon-2020 ,Fluorescence ,Communications ,3. Good health ,0104 chemical sciences ,Enzyme ,Microscopy, Fluorescence, Multiphoton ,chemistry ,Lymphocyte Specific Protein Tyrosine Kinase p56(lck) ,Biophysics ,Hypsochromic shift ,fluorescence ,Medicinal Chemistry ,Pharmacophore ,Protein Binding - Abstract
The development of a fluorescent LCK inhibitor that exhibits favourable solvatochromic properties upon binding the kinase is described. Fluorescent properties were realised through the inclusion of a prodan‐derived fluorophore into the pharmacophore of an ATP‐competitive kinase inhibitor. Fluorescence titration experiments demonstrate the solvatochromic properties of the inhibitor, in which dramatic increase in emission intensity and hypsochromic shift in emission maxima are clearly observed upon binding LCK. Microscopy experiments in cellular contexts together with flow cytometry show that the fluorescence intensity of the inhibitor correlates with the LCK concentration. Furthermore, multiphoton microscopy experiments demonstrate both the rapid cellular uptake of the inhibitor and that the two‐photon cross section of the inhibitor is amenable for excitation at 700 nm., A fluorescent LCK inhibitor has been obtained through the conjugation of a prodan‐derived fluorophore to the pharmacophore of an ATP‐competitive kinase inhibitor. Fluorescence titration experiments demonstrate the favourable solvatochromic properties of the inhibitor upon binding the kinase. Microscopy and flow cytometry experiments demonstrate that the fluorescence intensity of the inhibitor correlates with LCK concentration.
- Full Text
- View/download PDF
95. Triplet energy transfer in porphyrin dimers: Comparison between pi- and sigma-chromophore bridged systems
- Author
-
Joakim Andréasson, Kajanus, J., Martensson, J., and Albinsson, B.
96. Efficient non-radiative deactivation and conformational flexibility of meso-diaryloctaalkylporphyrins in the excited triplet state
- Author
-
Jerker Mårtensson, Bo Albinsson, Hanna Zetterqvist, Johan Kajanus, and Joakim Andréasson
- Subjects
Intersystem crossing ,Absorption spectroscopy ,Chemical physics ,Chemistry ,Excited state ,Singlet fission ,Physical and Theoretical Chemistry ,Atmospheric temperature range ,Triplet state ,Phosphorescence ,Photochemistry ,Ground state - Abstract
The excited triplet state deactivation of zinc(II) meso-diaryloctaalkylporphyrins (ZnDAOAP) has been studied over a wide temperature range using transient triplet-triplet absorption spectroscopy together with steady-state and time-resolved phosphorescence techniques, The results from transient absorption measurements show that the depopulation of the initially formed triplet state (T-1A state) is unusually fast at temperatures above 150 K. The efficiency of the deactivation originates from a spin allowed transition to a second tripler state (T-1B state), The transformation process T-1A-->T-1B is therefore the dominating deactivation channel of the T-1A state in this temperature range, and direct intersystem crossing T-1A-->S-0 makes negligible contribution. The subsequent ground-state recovery T-1B-->S-0 is also very efficient in comparison to many other porphyrins. Due to the substantial activation energy found for the transformation process, it most likely involves a conformational distortion of the porphyrin macrocycle. At low temperature, however, the relaxation of the T-1A State occurs by direct intersystem crossing to the ground state.
97. The Photophysical Properties of the Adenine Chromophore
- Author
-
Joakim Andréasson, and Anders Holmén, and Bo Albinsson
- Subjects
Solvent ,Chemistry ,Excited state ,Materials Chemistry ,Physical and Theoretical Chemistry ,Chromophore ,Alkylation ,Ground state ,Photochemistry ,Internal conversion (chemistry) ,Acceptor ,Quantum ,Surfaces, Coatings and Films - Abstract
The efficient nonradiative deactivation process of the excited adenine chromophore is studied in this paper. By comparing the photophysical properties and temperature dependence of several alkylated adenine derivatives, a mechanism for the thermally activated internal conversion process is suggested, Several alkylamino derivatives of adenine show dual fluorescence, and the solvent dependence of the excited states is investigated. It is concluded that the long wavelength emission originates from a CT state involving the alkylamino group and purine chromophore as donor and acceptor, respectively. The experimental observations are supported by quantum mechanical calculations, and the results are summarized into a model for the photophysical properties of the adenine chromophore. In this model, the two excited states associated with the dual emission from the alkylamino derivatives are populated from a common Franck-Condon state followed by independent decay to the ground state.
98. Photonic Control of Photoinduced Electron Transfer via Switching of Redox Potentials in a Photochromic Moiety
- Author
-
Yuichi Terazono, Devens Gust, Thomas A. Moore, Heinz Dürr, Ana L. Moore, Thomas Hartmann, Gerdenis Kodis, Alicia Brune, Goojin Jeong, and Joakim Andréasson
- Subjects
Photoisomerization ,Photochemistry ,Porphyrin ,Redox ,Photoinduced electron transfer ,Surfaces, Coatings and Films ,chemistry.chemical_compound ,Photochromism ,chemistry ,Covalent bond ,Materials Chemistry ,Moiety ,Physical and Theoretical Chemistry ,Ground state - Abstract
A porphyrin (P) has been covalently linked to a photochromic dihydroindolizine moiety (DHI) to form a P-DHI dyad. When the dihydroindolizine is in its closed, spirocyclic form (DHIc), the photophysics of the attached porphyrin are unaffected. Irradiation with UV light opens the photochromic moiety to the betaine form (DHIo), which has a significantly higher reduction potential than DHIc. Light absorption by the porphyrin moiety of P-DHIo is followed by rapid (50 ps) photoinduced electron transfer to yield the P.+-DHIo(.-) charge-seperated state. This state recombines in 2.9 ps to give the ground state. Irradiation of P-DHIo with light at wavelengths > 590 nm induces photoisomerization back to P-DHIc. Thermal closing can also be achieved. Thus, light is used to switch photoinduced electron transfer on or off. These principles may be useful in the design of molecular optoelectronic devices.
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