550 results on '"Hard clam"'
Search Results
52. Processing Mollusks
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Hackney, Cameron R., Martin, Roy E., editor, and Flick, George J., editor
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- 1990
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53. Shellfish-Mollusks
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Castagna, Michael, Martin, Roy E., editor, and Flick, George J., editor
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- 1990
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54. Synergistic Effect of Turmeric (Curcuma longa), Galanga (Alpinia galanga) Powder and Lemongrass (Cymbopogon citratus)) Essential Oil as Natural Preservative in Chilled Storage of White Hard Clam (Meretrix lyrata)
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Minh Phuoc Nguyen
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Preservative ,food.ingredient ,Phytochemistry ,biology ,Traditional medicine ,Chemistry ,Alpinia galanga ,General Chemistry ,biology.organism_classification ,Biochemistry ,law.invention ,food ,Cymbopogon citratus ,law ,Meretrix lyrata ,Drug Discovery ,Environmental Chemistry ,Curcuma ,Hard clam ,Essential oil - Published
- 2020
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55. Characteristics of a Novel Tyrosinase Gene Involved in the Formation of Shell Color in Hard Clam Meretrix meretrix
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Yinghui Dong, Xiaoying Li, Baoyue Cui, Zhihua Lin, and Hanhan Yao
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animal structures ,biology ,Tyrosinase ,Ocean Engineering ,04 agricultural and veterinary sciences ,Siphon (mollusc) ,Oceanography ,biology.organism_classification ,Melanin ,Biochemistry ,Trochophore ,Complementary DNA ,040102 fisheries ,0401 agriculture, forestry, and fisheries ,Hard clam ,Mantle (mollusc) ,Gene - Abstract
Hard clam (Meretrix meretrix) has a rich shell color variation among individuals from light yellow to bluish gray, brown red, and black, which may associating with melanin. Tyrosinase (Tyr) is a key rate-limiting enzyme for the biosynthesis of melanin, which affects the dark color of animal skin, hair, fur, scales and feathers. Here, we isolated and characterized the full-length cDNA sequence of M. meretrix tyrosinase gene (MmTyr) which encodes a protein with 689 amino acids. Sequence characteristics and phylogenetic analysis showed that there are a variety of Tyr genes in mollusks, which can be divided into different categories. The abundance of MmTyr transcript was detected in six tissues including mantle, adductor muscle, digestive gland, foot, gill and siphon of adult M. meretrix with qRT-PCR. The results showed a higher expression specifically in the mantle, digestive gland and siphon, which was consistent with the phenotypic color difference. In the embryos and larvae at different developmental stages, high expression was found in the trochophore larvae and juvenile clams. Among three M. meretrix strains with different shell colors, the expression level of MmTyr and total melanin content in the mantle edge both showed significant differences, suggesting that MmTyr is involved in the formation of shell color. The results obtained in this study will improve our understanding of molluscan tyrosinase gene function and molecular mechanism of shell color pattern determination.
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- 2020
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56. Impacts of culture survival rate on culture cost and input factors: Case study of the hard clam ( Meretrix meretrix ) culture in Yunlin County, Taiwan
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Jie-Min Lee, Chi‐Cheng Chang, Jung-Fu Huang, Christian Schafferer, and Li-Ming Ho
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Fishery ,Thesaurus (information retrieval) ,biology ,Aquatic Science ,Hard clam ,Meretrix meretrix ,biology.organism_classification ,Agronomy and Crop Science - Published
- 2019
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57. Strong genetic differentiation of the clam Meretrix lamarckii in the China Sea revealed by mitochondrial DNA marker
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Jiantong Feng, Yingying Ye, Zhenming Lü, Yahong Guo, Baoying Guo, Jiji Li, and Zeqin Fu
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Genetic Markers ,0301 basic medicine ,China ,Mitochondrial DNA ,Zoology ,DNA, Mitochondrial ,Nucleotide diversity ,Electron Transport Complex IV ,03 medical and health sciences ,0302 clinical medicine ,Genetic variation ,Genetics ,Animals ,Molecular Biology ,Genetic diversity ,biology ,Cytochrome b ,Haplotype ,Genetic Variation ,General Medicine ,Cytochromes b ,biology.organism_classification ,Bivalvia ,Genetic divergence ,030104 developmental biology ,Haplotypes ,030220 oncology & carcinogenesis ,Hard clam - Abstract
The hard clam Meretrix lamarckii is ecologically and economically important in the coastal regions of China. In this study, we evaluated the genetic diversity and population structure of six M. lamarckii populations in the East China Sea and the South China Sea using mitochondrial cytochrome c oxidase subunit 1 (COI) and cytochrome b (Cytb) genes. We obtained 582 bp of partly sequences comprising 28 novel haplotypes of COI gene from 138 specimens and 1168 bp of partly sequences comprising 22 novel haplotypes of Cytb gene from 125 specimens. The haplotype diversity of COI and Cytb genes ranged from 0.606 to 0.862 and 0.562 to 0.863, respectively. The nucleotide diversity ranged from 0.0015 to 0.0038 in COI gene and ranged from 0.0007 to 0.0032 in Cytb gene. Thus, there is moderate-level genetic diversity in M. lamarckii in the China Sea. The F-statistics showed that the Zhoushan (ZS) and Xiangshan (XS) populations were significantly (P
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- 2019
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58. Geographical distribution and seasonal variation in paralytic shellfish toxins in the coastal water of the South China Sea
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Shiyong Wen, Yubo Liang, Wei Jin, Jingyuan Yao, Renyan Liu, Daoyan Xu, Dongmei Li, and Songhui Lu
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China ,Veterinary medicine ,Oyster ,Oceans and Seas ,Food Contamination ,Toxicology ,Crustacea ,biology.animal ,medicine ,Animals ,Shellfish Poisoning ,Geography ,biology ,Fishes ,Mussel ,Seasonality ,medicine.disease ,biology.organism_classification ,Crustacean ,Shrimp ,Shellfish poisoning ,Mollusca ,Scallop ,Marine Toxins ,Seasons ,Hard clam - Abstract
Paralytic shellfish toxins (PSTs) are a group of the most harmful neurotoxins distributed worldwide. Marine organism samples, including mollusks, crustaceans and fish, collected from 11 sites around the coastal water of the South China Sea, were analyzed in terms of the PST and toxicity via high–performance liquid chromatography. The PST geographical distribution, detectable rate for PST and toxin content all increased slightly from 2006 to 2008 to 2015. High PST content with more than 2 nmol g−1 appeared in Shantou (ST), Shanwei (SW), Zhanjiang (ZJ), Beihai (BH), Xuwen (XW), Haikou (HK), Dongfang (DF), Wanning (WN) and Sanya (SY). Low PST content with less than 2 nmol g−1 appeared in Shenzhen (SZ) and Yangjiang (YJ). High PST toxicity over the safety limit 800 μg STXeq/kg appeared in ST, SW, ZJ, BH, DF, SY and XW. PST has significant seasonal characteristics and was mostly detected in spring, early summer (March–June) and autumn (September–November) in the coastal water of the South China Sea. PST was usually detected in some specific species of scallop, mussel, bloody clam, hard clam, razor clam, oyster, crab, shrimp and fish. Toxin profile variation of marine organism samples was influenced greatly by species, sampling time and site.
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- 2019
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59. Fate of benthic invertebrates during seabed liquefaction: Quantitative comparison of living organism body density with liquefied substrate density
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Kotaro Shirai, Koji Seike, Shinji Sassa, and Kaoru Kubota
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0106 biological sciences ,Corbicula ,010504 meteorology & atmospheric sciences ,biology ,010604 marine biology & hydrobiology ,Liquefaction ,Aquatic Science ,Oceanography ,biology.organism_classification ,01 natural sciences ,Substrate (marine biology) ,Sand dollar ,Benthic zone ,Corbicula japonica ,Environmental science ,Hard clam ,Seabed ,0105 earth and related environmental sciences - Abstract
Shaking of the ground caused by earthquakes and wave loading on the seafloor during storms can liquefy seabed sediments, highlighting that seabed ecosystems can be substantially affected by modification of the substrate. To investigate exogenous-forced behavior of organisms in liquefied substrates we measured the body density of benthic organisms including bivalves, gastropods, annelids, and echinoderms collected from coastal areas of Japan, and compared them with the liquefied substrate density. The measured density for most benthic individuals was less than that of the liquefied substrate, suggesting that these species would float upwards in liquefied substrates. In contrast, a few individuals of three species including the corbicula clam (Corbicula japonica), Stimpson's hard clam (Mercenaria stimpsoni), and the sand dollar (Scaphechinus mirabilis) had higher body densities than the density of the liquefied substrate. These heavier benthic invertebrates would be expected to move downward during liquefaction of the substrate. These findings indicate that body density may determine the response of each benthic species to seabed liquefaction, forcing them to move upward or downward depending on their body density.
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- 2019
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60. Clam focal and systemic immune responses to QPX infection revealed by RNA-seq technology.
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Kailai Wang, del Castillo, Carmelo, Corre, Erwan, Espinosa, Emmanuelle Pales, and Allam, Bassem
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IMMUNE response , *RNA sequencing , *BLOOD cells , *CLAMS , *CELLULAR signal transduction , *DISEASES - Abstract
Background: The hard clam Mercenaria mercenaria is an important seafood species widely exploited along the eastern coasts of the United States and play a crucial role in coastal ecology and economy. Severe hard clam mortalities have been associated with the protistan parasite QPX (Quahog Parasite Unknown). QPX infection establishes in pallial organs with the lesions typically characterized as nodules, which represent inflammatory masses formed by hemocyte infiltration and encapsulation of parasites. QPX infection is known to induce host changes on both the whole-organism level and at specific lesion areas, which imply systemic and focal defense responses, respectively. However, little is known about the molecular mechanisms underlying these alterations. Results: RNA-seq was performed using Illumina Hiseq 2000 (641 Million 100 bp reads) to characterize M. mercenaria focal and systemic immune responses to QPX. Transcripts were assembled and the expression levels were compared between nodule and healthy tissues from infected clams, and between these and tissues from healthy clams. De novo assembly reconstructed a consensus transcriptome of 62,980 sequences that was functionally-annotated. A total of 3,131 transcripts were identified as differentially expressed in different tissues. Results allowed the identification of host immune factors implicated in the systemic and focal responses against QPX and unraveled the pathways involved in parasite neutralization. Among transcripts significantly modulated upon host-pathogen interactions, those involved in non-self recognition, signal transduction and defense response were over-represented. Alterations in pathways regulating hemocyte focal adhesion, migration and apoptosis were also demonstrated. Conclusions: Our study is the first attempt to thoroughly characterize M. mercenaria transcriptome and identify molecular features associated with QPX infection. It is also one of the first studies contrasting focal and systemic responses to infections in invertebrates using high-throughput sequencing. Results identified the molecular signatures of clam systemic and focal defense responses, to collectively mediate immune processes such as hemocyte recruitment and local inflammation. These investigations improve our understanding of bivalve immunity and provide molecular targets for probing the biological bases of clam resistance towards QPX. [ABSTRACT FROM AUTHOR]
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- 2016
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61. Alterations of the immune transcriptome in resistant and susceptible hard clams (Mercenaria mercenaria) in response to Quahog Parasite Unknown (QPX) and temperature.
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Wang, Kailai, Pales Espinosa, Emmanuelle, Tanguy, Arnaud, and Allam, Bassem
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NORTHERN quahog , *PARASITES , *DISEASE progression , *INFECTION , *BIOMARKERS - Abstract
Quahog Parasite Unknown (QPX) is a fatal protistan parasite that causes severe losses in the hard clam ( Mercenaria mercenaria ) fisheries along the northeastern coast of the US. Field and laboratory studies of QPX disease have demonstrated a major role for water temperature and M. mercenaria genetic origin in disease development. Infections are more likely to occur at cold temperatures, with clam stocks originating from southern states being more susceptible than clams from northern origin where disease is enzootic. Even though the influence of temperature on QPX infection have been examined in susceptible and resistant M. mercenaria at physiological and cellular scales, the underlying molecular mechanisms associated with host–pathogen interactions remain largely unknown. This study was carried out to explore the molecular changes in M. mercenaria in response to temperature and QPX infection on the transcriptomic level, and also to compare molecular responses between susceptible and resistant clam stocks. A M. mercenaria oligoarray (15 K Agilent) platform was produced based on our previously generated transcriptomic data and was used to compare gene expression profiles in naive and QPX-infected susceptible (Florida stock) and resistant (Massachusetts) clams maintained at temperatures favoring disease development (13 °C) or clam healing (21 °C). In addition, transcriptomic changes reflecting focal (the site of infection, mantle) and systemic (circulating hemocytes) responses were also assessed using the oligoarray platform. Results revealed significant regulation of multiple biological pathways by temperature and QPX infection, mainly associated with immune recognition, microbial killing, protein synthesis, oxidative protection and metabolism. Alterations were widely systemic with most changes in gene expression revealed in hemocytes, highlighting the role of circulating hemocytes as the first line of defense against pathogenic stress. A large number of complement-related recognition molecules with fibrinogen or C1q domains were shown to be specially induced following QPX challenge, and the expression of these molecules was significantly higher in resistant clams as compared to susceptible ones. These highly variable immune proteins may be potent candidate molecular markers for future study of M. mercenaria resistance against QPX. Beyond the specific case of clam response to QPX, this study also provides insights into the primitive complement-like system in the hard clam. [ABSTRACT FROM AUTHOR]
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- 2016
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62. Structural transformation of oyster, hard clam, and sea urchin shells after calcination and their antibacterial activity against foodborne microorganisms.
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Chen, Yu-Chun, Lin, Chun-Lan, Li, Chih-Ting, and Hwang, Deng-Fwu
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OYSTERS , *NORTHERN quahog , *SEA urchins , *CALCINATION (Heat treatment) , *ANTIBACTERIAL agents - Abstract
The aim of this study was to evaluate the antibacterial properties of oyster, hard clam, and sea urchin shell powders as a result of calcination. After subjection to calcination at 1050 °C for 2 h, and as identified by FTIR and XRD spectra, the structures of oyster, hard clam, and sea urchin shell powders were mainly transformed into calcium oxide, with slight amounts of calcium hydroxide. Metal content testing revealed no detectable harmful heavy metals, and showed rich content of trace elements including Ba, Sr, Mg, and Mn. To evaluate their antibacterial properties, activity against five foodborne microorganisms was assessed using the disk diffusion method, which indicated the presence of antibacterial activity in these products at a concentration of 1 %. These results indicate antibacterial potential for oyster, hard clam, and sea urchin shell powders after subjection to calcination. [ABSTRACT FROM AUTHOR]
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- 2015
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63. Analysis of persistent organochlorine pesticides in shellfish and their risk assessment from aquafarms in Taiwan
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Geng-Ruei Chang, Wei-Cheng Yang, Jiann-Hsiung Wang, Chuen-Fu Lin, Wei-Li Lin, Pei-Shan Fan, Chen-Yung Kao, Huei-Jyuan Liao, Chia-Chia Chang, Chung-Pei Chang, Jen-Wei Lin, and Chao-Min Wang
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Acceptable daily intake ,business.industry ,Taiwan ,Chlordane ,Aquatic Science ,Biology ,Oceanography ,biology.organism_classification ,Food safety ,Pollution ,Risk Assessment ,Gas Chromatography-Mass Spectrometry ,Toxicology ,chemistry.chemical_compound ,Aquaculture ,chemistry ,Hydrocarbons, Chlorinated ,Hard clam ,Corbicula fluminea ,Pesticides ,business ,Meretrix lusoria ,Shellfish ,Water Pollutants, Chemical - Abstract
In Taiwan, freshwater clams (Corbicula fluminea) and hard clams (Meretrix lusoria) are the most frequently raised shellfish in land-based pond aquaculture, but research on the accumulation of organochlorine pesticides (OCPs) in these shellfish is limited. We detected the levels of 14 OCPs in 62 shellfish from Taiwanese aquafarms by performing gas chromatography–tandem mass spectrometry. OCP residues were detected in 4.84% of the samples including readings of 0.04 mg/kg chlordane (in a freshwater clam), 0.03 mg/g p,p′-DDE (in a freshwater clam), and 0.02 mg/g p,p′-DDE (in a hard clam). However, the associated estimated daily intake values were less than the acceptable daily intake levels of chlordane and p,p′-DDE Therefore, the consumption of these shellfish presents no immediate health risks. Our findings contribute to food safety and serve as a reference for OCP screenings for aquatic shellfish.
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- 2021
64. The hard clam genome reveals massive expansion and diversification of inhibitors of apoptosis in Bivalvia
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Lina Sun, Haiyan Wang, Ximing Guo, Qing Wang, Phillip L Davidson, Cong Zhou, Hao Song, Pu Shi, Mei-Jie Yang, Yi Zhou, Zheng-Lin Yu, Zhi Hu, Qianghui Wang, Fengming Han, Libin Zhang, Jie Feng, Gregory A. Wray, and Tao Zhang
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Gene duplication ,Physiology ,Apoptosis ,Plant Science ,Genome ,General Biochemistry, Genetics and Molecular Biology ,Divergence ,Inhibitor of Apoptosis Proteins ,03 medical and health sciences ,0302 clinical medicine ,Mercenaria ,Structural Biology ,Molecular evolution ,Gene family ,Animals ,lcsh:QH301-705.5 ,Gene ,Ecology, Evolution, Behavior and Systematics ,030304 developmental biology ,0303 health sciences ,biology ,Cell Biology ,IAP gene family ,biology.organism_classification ,body regions ,lcsh:Biology (General) ,Evolutionary biology ,Mollusca ,030220 oncology & carcinogenesis ,Tandem exon duplication ,Hard clam ,General Agricultural and Biological Sciences ,Developmental Biology ,Biotechnology ,Research Article - Abstract
Background Inhibitors of apoptosis (IAPs) are critical regulators of programmed cell death that are essential for development, oncogenesis, and immune and stress responses. However, available knowledge regarding IAP is largely biased toward humans and model species, while the distribution, function, and evolutionary novelties of this gene family remain poorly understood in many taxa, including Mollusca, the second most speciose phylum of Metazoa. Results Here, we present a chromosome-level genome assembly of an economically significant bivalve, the hard clam Mercenaria mercenaria, which reveals an unexpected and dramatic expansion of the IAP gene family to 159 members, the largest IAP gene repertoire observed in any metazoan. Comparative genome analysis reveals that this massive expansion is characteristic of bivalves more generally. Reconstruction of the evolutionary history of molluscan IAP genes indicates that most originated in early metazoans and greatly expanded in Bivalvia through both lineage-specific tandem duplication and retroposition, with 37.1% of hard clam IAPs located on a single chromosome. The expanded IAPs have been subjected to frequent domain shuffling, which has in turn shaped their architectural diversity. Further, we observed that extant IAPs exhibit dynamic and orchestrated expression patterns among tissues and in response to different environmental stressors. Conclusions Our results suggest that sophisticated regulation of apoptosis enabled by the massive expansion and diversification of IAPs has been crucial for the evolutionary success of hard clam and other molluscan lineages, allowing them to cope with local environmental stresses. This study broadens our understanding of IAP proteins and expression diversity and provides novel resources for studying molluscan biology and IAP function and evolution.
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- 2021
65. Recruitment and movement of the hard clam Meretrix lusoria in a tidal river of northern Kyushu, Japan.
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Henmi, Yasuhisa, Kobayashi, Satoshi, Yamaguchi, Junpei, and Hashiguchi, Masahiro
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CLAMS , *MARINE animals , *SPAWNING , *WATER pollution , *EUTROPHICATION , *DAM design & construction - Abstract
Size-frequency distributions of Meretrix lusoria, a commercially important bivalve in Japan, were compared among 6 sites in tidal flats of a small river in Kafuri Bay, northern Kyushu, Japan during 2006-2008. In Kafuri Bay, the hard clam resource is strictly managed and mean biomass of this species on the fishing ground (about 1.5 km) exceeded 1.5 kg m in 2008. Small clams (<5 mm in shell length, SL) were most abundant in the border area between the river and the sea, while large clams (>40 mm SL) were rare there. In contrast, in the lower site of the marine area (site L), most clams were >30 mm SL. These results indicate that small clams move from riverine to marine areas with growth (post-settlement movement). Year-round, very small clams (<1 mm SL) were present and clams that were 2-5 mm SL were very rare, although the spawning season is thought to occur in summer. Probably, the early growth of many new recruits is very slow and most may even be <1 mm SL in the next spring, although some clams grow to >5 mm SL in a short period of time. [ABSTRACT FROM AUTHOR]
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- 2014
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66. Microplastic Contamination of Three Commonly Consumed Seafood Species from Taiwan: A Pilot Study
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Jennifer Yee Shian Chen, Yao Chang Lee, and Bruno Andreas Walther
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Oyster ,Microplastics ,microplastics ,Geography, Planning and Development ,Taiwan ,TJ807-830 ,010501 environmental sciences ,Management, Monitoring, Policy and Law ,TD194-195 ,01 natural sciences ,Renewable energy sources ,marine anthropogenic litter ,03 medical and health sciences ,plastic pollution ,biology.animal ,GE1-350 ,14. Life underwater ,Food science ,seafood ,Loliginidae ,030304 developmental biology ,0105 earth and related environmental sciences ,0303 health sciences ,biology ,Environmental effects of industries and plants ,Renewable Energy, Sustainability and the Environment ,food security ,Contamination ,biology.organism_classification ,atmospheric_science ,Environmental sciences ,13. Climate action ,Environmental science ,Hard clam ,Meretrix lusoria ,Plastic pollution - Abstract
Microplastics have already been detected in various human foods, especially seafood. This problem should be especially pertinent to the Taiwanese public because a relatively high proportion of people&rsquo, s diet comes from seafood. Therefore, a pilot study of microplastic contamination of seafood products commonly consumed by Taiwanese people is presented. Six batches of three seafood species were examined for the presence of microplastics using FTIR spectroscopy. A total of 107 seafood individuals from three species (hard clam Meretrix lusoria, oyster Crassostrea gigas, Loligo squid Loliginidae spp.) weighing a total of 994 g yielded a total of 100 microplastic particles consisting of nine different polymer types. The most common polymer types were polypropylene, poly(ethylene:propylene:diene), and polyethylene terephthalate, we also detected six additional, but less common polymer types. A total of 91% of microplastic particles were fragments that likely originated from fragmented plastic debris which was then consumed by the seafood species, the remaining particles were fibers and a pellet. The mean number of microplastics kg&minus, 1 was 87.9 microplastics kg&minus, 1 across the three examined species. Given that the Taiwanese public average about 10 kg of seafood consumption per year, a few thousand microplastic particles are estimated to be annually consumed on average. The methodology of this pilot study can now be used to conduct examinations of more seafood species and samples.
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- 2020
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67. Quinolone and Organophosphorus Insecticide Residues in Bivalves and Their Associated Risks in Taiwan
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Chang-Hui Yeh, Ching-Hung Chen, Ching-Feng Wu, Wei-Cheng Yang, Ching-Fen Wu, Geng-Ruei Chang, Ching-Yang Wu, Hsiao-Pei Tsai, Yao-Chi Su, Pei-Shan Fan, and Chen-Si Lin
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Male ,Insecticides ,Acceptable daily intake ,010504 meteorology & atmospheric sciences ,Pharmaceutical Science ,Aquaculture ,010501 environmental sciences ,Quinolones ,bivalves ,01 natural sciences ,Analytical Chemistry ,Toxicology ,chemistry.chemical_compound ,residues ,quinolone ,Tandem Mass Spectrometry ,Drug Discovery ,Chromatography, High Pressure Liquid ,biology ,risk assessment ,Chemistry (miscellaneous) ,Chlorpyrifos ,Molecular Medicine ,Female ,Meretrix lusoria ,medicine.drug ,animal structures ,Taiwan ,Article ,Gas Chromatography-Mass Spectrometry ,organophosphorus pesticide ,lcsh:QD241-441 ,Organophosphorus Compounds ,lcsh:Organic chemistry ,medicine ,Animals ,Humans ,Physical and Theoretical Chemistry ,Corbicula fluminea ,Trichlorfon ,Shellfish ,0105 earth and related environmental sciences ,Organic Chemistry ,Pesticide ,biology.organism_classification ,Bivalvia ,chemistry ,Seafood ,Flumequine ,Hard clam - Abstract
Bivalves, such as freshwater clams (Corbicula fluminea) and hard clams (Meretrix lusoria), are the most extensive and widely grown shellfish in land-based ponds in Taiwan. However, few studies have examined the contamination of bivalves by quinolone and organophosphorus insecticides. Thus, we adapted an established procedure to analyze 8 quinolones and 12 organophosphorus insecticides using liquid and gas chromatography&ndash, tandem mass spectrometry. Surveys in Taiwan have not noted high residual levels of these chemicals in bivalve tissues. A total of 58 samples of freshwater or hard clams were obtained from Taiwanese aquafarms. We identified 0.03 mg/kg of enrofloxacin in one freshwater clam, 0.024 mg/kg of flumequine in one freshwater clam, 0.02 mg/kg of flumequine in one hard clam, 0.05 mg/kg of chlorpyrifos in one freshwater clam, 0.03 mg/kg of chlorpyrifos in one hard clam, and 0.02 mg/kg of trichlorfon in one hard clam. The results indicated that 5.17% of the samples had quinolone insecticide residues and 5.17% had organophosphorus residues. However, the estimated daily intake (EDI)/acceptable daily intake quotient (ADI) indicated no significant risk and no immediate health risk from the consumption of bivalves. These results provide a reference for the food-safety screening of veterinary drugs and pesticides in aquatic animals. Aquatic products should be frequently screened for residues of prohibited chemicals to safeguard human health.
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- 2020
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68. Ultrastructure of sperm and complete mitochondrial genome in Meretrix sp. (Bivalvia: Veneridae) from Taiwan
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Te-Hua Hsu and Jin-Chywan Gwo
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0106 biological sciences ,0301 basic medicine ,Male ,Mitochondrial DNA ,Taiwan ,Zoology ,010603 evolutionary biology ,01 natural sciences ,Genome ,03 medical and health sciences ,medicine ,Animals ,Cell Nucleus ,biology ,Veneridae ,Cell Biology ,General Medicine ,Bivalvia ,biology.organism_classification ,Sperm ,Spermatozoa ,030104 developmental biology ,medicine.anatomical_structure ,Sperm Tail ,Genome, Mitochondrial ,Ultrastructure ,Gamete ,Hard clam ,Acrosome ,Developmental Biology - Abstract
Spermatozoan ultrastructure and complete mitochondrial genome in the marine bivalve mollusk Meretrix sp. (Taiwan) from Taiwan are described and contrasted with other bivalves, especially within Meretrix. We have examined the features of the mature gonadal spermatozoa of Meretrix sp. (Taiwan) and provided comparisons with the other four Meretrix species (M. petechialis, M. meretrix, M. lyrata, and M. lamarckii). The morphological characteristics of these spermatozoa are diagnostic for each of the species studied here. The most marked interspecific difference was found in the acrosome. Meretrix sp. (Taiwan) is genetically distinct and is a different species from M. petechialis and M. lusoria (Japan) based on complete mitochondrial genome data. Sperm data for Meretrix are limited but show remarkable congruence with the molecular results. We suggest use Meretrix formosa Gwo and Hsu as the scientific name for Taiwanese hard clams, Meretrix sp. (Taiwan). Additional species, particularly the Japanese hard clam (M. lusoria) require examination before this tentative conclusion can be verified.
- Published
- 2020
69. Multi-year assessment of paralytic shellfish toxins in hard clam species along the coastline of Jiangsu Province, China
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Libao Wang, Ying Cheng, Rui Liu, Xinzhi Wang, Hao Wu, Chuan Chai, Chen-Xiao Shan, and Hong-mei Wen
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010504 meteorology & atmospheric sciences ,biology ,Mactra veneriformis ,Ruditapes ,Aquatic Science ,Meretrix meretrix ,010502 geochemistry & geophysics ,Oceanography ,biology.organism_classification ,medicine.disease ,01 natural sciences ,Additional research ,Shellfish poisoning ,Fishery ,medicine ,media_common.cataloged_instance ,European union ,Hard clam ,China ,0105 earth and related environmental sciences ,media_common - Abstract
Paralytic shellfish toxins (PSTs) are notorious neurotoxins that threaten public health and food safety worldwide. Although PST monitoring programs have recently been established throughout China, the profiles and variation of PSTs in important commercial clams (e.g., Mactra veneriformis, Ruditapes philippinarum, and Meretrix meretrix) along the Jiangsu Province coastline remain largely unexplored. In this study, a validated hydrophilic interaction liquid chromatography–tandem mass spectrometry (HILIC-MS/MS) method was used to examine PST profiles and levels in 540 clam samples from natural production areas along Jiangsu Province coastline during 2014–2016. Although the PST levels (≤6.38 μg saxitotoxin equivalents (eq)/kg) were consistently below European Union regulatory limits (≤800 μg saxitotoxin eq/kg) during this time period, saxitotoxin, decarbamoylsaxitotoxin, and gonyautoxins 1 and 4 were detected, and nearly 40% of the samples were saxitotoxin-positive. The PST levels also varied significantly by seasons, with peak values observed in May during 2014–2016. This is the first systematic report of PSTs in clams from Jiangsu Province, and additional research and protective measures are needed to ensure the safety of clams harvested in this area.
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- 2019
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70. Population genetic structure of Asiatic Hard Clam (Meretrix meretrix) in Thailand based on Cytochrome Oxidase subunit I gene sequence
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Juthamas Suppapan, Pradit Sangthong, Apirak Songrak, and Verakiat Supmee
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0301 basic medicine ,education.field_of_study ,Mitochondrial DNA ,Genetic diversity ,biology ,QH301-705.5 ,Population ,Nucleic acid sequence ,Zoology ,Plant Science ,biology.organism_classification ,mitochondrial dna, genetic diversity, cytochrome oxidase subunit i, asiatic hard clam, thailand ,Gene flow ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Effective population size ,parasitic diseases ,Genetic structure ,Animal Science and Zoology ,Biology (General) ,Hard clam ,education ,Molecular Biology ,030217 neurology & neurosurgery - Abstract
Supmee V, Sangthong P, Songrak A, Suppapan J. 2020. Population genetic structure of Asiatic Hard Clam (Meretrix meretrix) in Thailand based on Cytochrome Oxidase subunit I gene sequence. Biodiversitas 21: 2702-2709. The Asiatic hard clam (Meretrix meretrix) is an important commercial clam in Thailand. Last decade, this species had a dramatic decrease. Thus, to conserve this species, genetic information is essential. In our study, 135 samples of M. meretrix were collected from 7 sampling sites along the Thailand coast. The genetic structure was examined based on the variation of the nucleotide sequence in cytochrome oxidase subunit I gene. Twenty haplotypes were identified. Numerous rare haplotypes were revealed indicating the existence of a large female effective population size. In the northern Gulf of Thailand population, the genetic diversity was low. The neutrality test and minimum spanning network showed experienced expansion events of M. meretrix in Thailand. The genetic structure showed that the M. meretrix population was separated into the Gulf of Thailand and the Andaman population. This finding was possibly caused by a disruption of gene flow from the Thai-Malay Peninsula and larval behavior. Our finding suggested that the construction management program to maintain the genetic diversity of this species could be separated into 2 conservation units.
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- 2020
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71. White hard clam (Meretrix lyrata) shells media to improve phosphorus removal in lab-scale horizontal sub-surface flow constructed wetlands: Performance, removal pathways, and lifespan
- Author
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Wenshan Guo, T.T. Nguyen, T.K.A. Bui, Satoshi Soda, T.D.H. Vo, Xuan-Thanh Bui, N.D. Vu, T.H.H. Nguyen, T.T. Pham, Hao H. Ngo, and Thi An Hang Nguyen
- Subjects
0106 biological sciences ,Environmental Engineering ,Swine ,Longevity ,chemistry.chemical_element ,Bioengineering ,Wetland ,010501 environmental sciences ,Wastewater ,01 natural sciences ,Waste Disposal, Fluid ,Meretrix lyrata ,010608 biotechnology ,Animals ,Waste Management and Disposal ,Effluent ,0105 earth and related environmental sciences ,geography ,geography.geographical_feature_category ,biology ,Renewable Energy, Sustainability and the Environment ,Phosphorus ,Sorption ,General Medicine ,biology.organism_classification ,Pulp and paper industry ,Substrate (marine biology) ,Bivalvia ,chemistry ,Wetlands ,Hard clam ,Water Pollutants, Chemical - Abstract
This work examined the phosphorus (P) removal from the synthetic pretreated swine wastewater using lab-scale horizontal sub-surface flow constructed wetlands (HSSF-CWs). White hard clam (Meretrix lyrata) shells (WHC) and Paspalum atratum were utilized as substrate and plant, respectively. The focus was placed on treatment performance, removal mechanisms and lifespan of the HSSF-CWs. Results indicated that WHC-based HSSF-CW with P. atratum exhibited a high P removal (89.9%). The mean P efluent concentration and P removal rate were 1.34 ± 0.95 mg/L and 0.32 ± 0.03 g/m2/d, respectively. The mass balance study showed that media sorption was the dominant P removal pathway (77.5%), followed by microbial assimilation (14.5%), plant uptake (5.4%), and other processes (2.6%). It was estimated the WHC-based bed could work effectively for approximately 2.84 years. This WHC-based HSSF-CWs technology will therefore pave the way for recycling Ca-rich waste materials as media in HSSF-CWs to enhance P-rich wastewater purification.
- Published
- 2020
72. The sunray venus clam, Macrocallista nimbosa, exhibits asynchronous spawning
- Author
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Susan Laramore, Leslie Sturmer, and Carolyn Sinacore
- Subjects
lcsh:SH1-691 ,0106 biological sciences ,biology ,urogenital system ,business.industry ,010604 marine biology & hydrobiology ,fungi ,Macrocallista nimbosa ,Zoology ,04 agricultural and veterinary sciences ,Aquatic Science ,Reproductive cycle ,biology.organism_classification ,01 natural sciences ,lcsh:Aquaculture. Fisheries. Angling ,Aquaculture ,Hermaphrodite ,Long period ,Phytoplankton ,040102 fisheries ,0401 agriculture, forestry, and fisheries ,Animal Science and Zoology ,Hard clam ,business ,Shellfish - Abstract
The reproductive cycle of the sunray venus (SRV) clam, Macrocallista nimbosa, was initially described over 40 years ago and was labeled as a “fall spawner” based on that study. Interest in the SRV clam as an alternative bivalve species for Florida shellfish aquaculture was established a decade ago but due to it’s reputation as an unreliable spawner, production of this clam has stalled. This study was conducted to provide a more thorough description of the reproductive cycle, including detail-oriented reproductive staging in an effort to determine the cause of reported spawning difficulties. Regardless of sex, M. nimbosa follicles were observed to be continual spawners. It was not uncommon to observe follicles in four of the six gametogenic stages simultaneously. Spawning was generally protracted with no long period of inactivity. A single hermaphrodite suggested possibility of protandry. Although spawning and gametogenesis were continuous, bimodal spawning peaks were seen; however, these peaks occurred asynchronously. These observations lend credence to reports of unreliable spawning and limited egg production during thermal induction. Continuously collected environmental data indicated that spawning in females followed increased turbidity (used as a phytoplankton proxy). This observed increase in spawning in females reiterates the role of diet in gametogenic production. It may be necessary to adjust currently established hard clam feeding practices during maturation in order to increase egg production and optimize spawning potential in this species. Further research into the optimization of temperature, concentration and types of microalgal species fed during maturation is suggested. Keywords: Macrocallista nimbosa, Sunray venus clam, Histology, Reproductive cycle
- Published
- 2018
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73. Ecological Carrying Capacity for Shellfish Aquaculture—Sustainability of Naturally Occurring Filter-Feeders and Cultivated Bivalves
- Author
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João G. Ferreira, Richard A. Corner, Heather Moore, Matthew Service, Suzanne B. Bricker, and Robert Rheault
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0106 biological sciences ,education.field_of_study ,Detritus ,Ecology ,business.industry ,010604 marine biology & hydrobiology ,Population ,04 agricultural and veterinary sciences ,Aquatic Science ,Biology ,biology.organism_classification ,01 natural sciences ,Aquaculture ,Benthic zone ,Ecosystem model ,040102 fisheries ,0401 agriculture, forestry, and fisheries ,Ecosystem ,Hard clam ,education ,business ,Blue mussel - Abstract
Carrying capacity models for aquaculture have increased in complexity over the last decades, partly because aquaculture growth, sustainability, and licensing are themselves extremely complex. Moreover, there is an asymmetric pattern to all these components, when considered from an international perspective, because of very different regulation and governance of the aquaculture sector in Asia, Europe, and America. Two case studies were used, from Long Island Sound in the United States, and Belfast Lough, in Europe, to examine the interactions between cultivated shellfish and other autochthonous benthic filter-feeders. The objective is to illustrate how such interactions can be incorporated in system-scale ecological models and analyzed from the perspective of ecological carrying capacity. Two different models are described, one based on equations that relate the filtration rate of the hard clam Mercenaria mercenaria to physiological and population factors and one based on a habitat-specific analysis of multiple species of benthic filter-feeders. Both types of models have relative advantages and challenges, and both were integrated in ecosystem modeling frameworks with substantial numbers of state variables representing physical and biogeochemical processes. These models were applied to (1) examine the relative role of the two components (cultivated and wild) in the filtration of particulate organic matter (both phytoplankton and organic detritus), (2) quantify the effect of wild species on harvest of cultivated organisms (eastern oyster and blue mussel), and (3) assess the role of organically extractive aquaculture and other filter-feeders on top–down control of eutrophication.
- Published
- 2018
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74. A Reviewof QPX Disease In Thenorthernquahog(= Hard Clam)Mercenaria mercenaria
- Author
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Roxanna Smolowitz
- Subjects
0106 biological sciences ,Facultative ,animal structures ,Mercenaria ,biology ,010604 marine biology & hydrobiology ,Zoology ,04 agricultural and veterinary sciences ,Broodstock ,Aquatic Science ,biology.organism_classification ,01 natural sciences ,040102 fisheries ,0401 agriculture, forestry, and fisheries ,Parasite hosting ,Juvenile ,Hard clam - Abstract
QPX (Quahog Parasite Unknown), a thraustochytrid, is the source of morbidity and mortality in hard clams, Mercenaria mercenaria along the northeast coast of North America. The QPX organism is a facultative pathogen that results in disease in clams held at high densities and salinities. The disease most commonly causes losses in two-year-old aquacultured clams. In some locations, nodules and swellings containing QPX can be identified in the mantle often in areas adjacent to the siphon. Histologically, the organism is surrounded by thick mucus that inhibits phagocytosis by the clam's inflammatory cells especially during the spring and fall when the clam's immune system is less active. Variability in severity of infection and morbidity has been associated with origin of the brood stock with juvenile clams from southern U.S. brood stock being the most affected.
- Published
- 2018
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75. Growth Analysis of the hard clam, Meretrix petechialis (Lamarck), collected from the Eurwang-dong Shell Midden, Incheon, Korea
- Author
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Deog-im An and Dong-Ki Ryu
- Subjects
Fishery ,Meretrix petechialis ,Shell (structure) ,Biology ,Hard clam ,biology.organism_classification ,Midden - Published
- 2018
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76. Cryopreservation of trochophore larvae from the hard clamMercenaria mercenaria: Evaluation of the cryoprotectant toxicity, cooling rate and thawing temperature
- Author
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Huiping Yang and Natalie A Simon
- Subjects
0301 basic medicine ,Cryoprotectant toxicity ,Larva ,Mercenaria ,biology ,Zoology ,04 agricultural and veterinary sciences ,Aquatic Science ,biology.organism_classification ,Cryopreservation ,03 medical and health sciences ,030104 developmental biology ,Cooling rate ,Trochophore ,040102 fisheries ,0401 agriculture, forestry, and fisheries ,Hard clam - Published
- 2018
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77. Identification of clam plasma proteins that bind its pathogen Quahog Parasite Unknown
- Author
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Rachel Hartman, Emmanuelle Pales Espinosa, and Bassem Allam
- Subjects
Proteomics ,0301 basic medicine ,animal structures ,Aquatic Science ,Host-Parasite Interactions ,Microbiology ,03 medical and health sciences ,Mercenaria ,Animals ,Environmental Chemistry ,Parasite hosting ,Pathogen ,Shellfish ,biology ,Proteolytic enzymes ,Blood Proteins ,04 agricultural and veterinary sciences ,General Medicine ,biology.organism_classification ,Blood proteins ,030104 developmental biology ,040102 fisheries ,0401 agriculture, forestry, and fisheries ,Hard clam ,Stramenopiles - Abstract
The hard clam (Mercenaria mercenaria) is among the most economically-important marine species along the east coast of the United States, representing the first marine resource in several Northeastern states. The species is rather resilient to infections and the only important disease of hard clams results from an infection caused by Quahog Parasite Unknown (QPX), a protistan parasite that can lead to significant mortality events in wild and aquacultured clam stocks. Though the presence of QPX disease has been documented since the 1960s, little information is available on cellular and molecular interactions between the parasite and the host. This study examined the interactions between the clam immune system and QPX cells. First, the effect of clam plasma on the binding of hemocytes to parasite cells was evaluated. Second, clam plasma proteins that bind QPX cells were identified through proteomic (LC-MS/MS) analyses. Finally, the effect of prior clam exposure to QPX on the abundance of QPX-reactive proteins in the plasma was evaluated. Results showed that plasma factors enhance the attachment of hemocytes to QPX. Among the proteins that specifically bind to QPX cells, several lectins were identified, as well as complement component proteins and proteolytic enzymes. Furthermore, results showed that some of these lectins and complement-related proteins are inducible as their abundance significantly increased following QPX challenge. These results shed light on plasma proteins involved in the recognition and binding of parasite cells and provide molecular targets for future investigations of factors involved in clam resistance to the disease, and ultimately for the selection of resistant clam stocks.
- Published
- 2018
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78. Effects of salinity on hard clam (Mercenaria mercenaria) defense parameters and QPX disease dynamics
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Perrigault, Mickael, Dahl, Soren F., Espinosa, Emmanuelle Pales, and Allam, Bassem
- Subjects
- *
SALINITY , *NORTHERN quahog , *PARASITES , *REACTIVE oxygen species , *BLOOD cells , *LYSOZYMES - Abstract
Abstract: QPX (Quahog Parasite Unknown) is a protistan parasite affecting hard clams (Mercenaria mercenaria) along the Northeast coast of the United States. The fact that QPX disease epizootics are usually observed in field sites with high salinities led to the general assumption that salinity represents an important factor for disease distribution. This study was designed to investigate the effect of salinity on QPX disease development as well as constitutive and QPX-induced defense factors in M. mercenaria. Naïve and QPX-infected (both experimentally and naturally) clams were submitted to 17 and 30psu for 4months. Standard and QPX-specific cellular and humoral defense parameters were assessed after 2 and 4months. These included total and differential hemocyte counts, reactive oxygen species production, phagocytic activity of hemocytes, lysozyme concentration in plasma, anti-QPX activity in plasma and resistance of hemocytes to cytotoxic QPX extracellular products. Results demonstrated higher QPX-associated mortality in naturally infected clams maintained at high salinity compared to those held at 17psu. Our findings also showed an increase in mortality following experimental challenge with QPX in clams submitted to 30psu but not in those held at 17psu. Constitutive clam defense factors and the response to QPX challenge were also affected by salinity. QPX challenge caused significant but transitory changes in hemolymph parameters that were obvious at 2months but disappeared at 4months. Overall, our results show that salinity modulates clam immunity and the progress of QPX disease although its impact appears secondary as compared to findings we reported earlier for temperature. [Copyright &y& Elsevier]
- Published
- 2012
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79. Identification and expression of a putative LPS-induced TNF-α factor from Asiatic hard clam Meretrix meretrix.
- Author
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Li, Hong-jun, Yang, Qing, Gao, Xiang-gang, Su, Hao, Wang, Juan, and He, Chong-bo
- Abstract
LPS-induced TNF-α (LITAF) is a novel transcriptional factor that mediates the expression of inflammatory cytokines in LPS-induced processes. In the present study, the full-length cDNA encoding LITAF (designated as Mm-LITAF) was identified from Asiatic hard clam, Meretrix meretrix, by expressed sequence tag and rapid amplification of cDNA ends (RACE) approaches. The full-length cDNA of Mm-LITAF was 1653 bp, consisting of a 5′ untranslated region (UTR) of 91 bp, a 3′UTR of 1166 bp with one cytokine RNA instability motif (ATTTA) and one polyadenylation signal (AATAAA), and an open reading frame (ORF) of 396 bp encoding a polypeptide of 131 amino acids with a theoretical isoelectric point of 7.49, and predicted molecular weight of 14.47 kDa. The deduced amino acid of Mm-LITAF shared 29-63% similarity with the LITAFs from other species, indicating that Mm-LITAF should be a member of the LITAF family. Two highly conserved CXXC motifs forming a compact Zn-binding structure were also identified in Mm-LITAF. A quantitative reverse transcriptase real-time PCR (qRT-PCR) assay was developed to assess the expression of Mm-LITAF mRNA in different tissues, and the temporal expression of Mm-LITAF in clams challenged with Vibrio anguillarum. The mRNA transcript of Mm-LITAF could be detected in all the examined tissues with the highest expression level in the gill. Mm-LITAF expression was up-regulated significantly at 16 h in the gill and at 8 h in haemocytes after bacterial challenge, respectively. These results suggest that the Mm-LITAF is a constitutive and inducible acute-phase protein that perhaps involved in the innate immune response of hard clam. [ABSTRACT FROM AUTHOR]
- Published
- 2012
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80. Effects of temperature on hard clam (Mercenaria mercenaria) immunity and QPX (Quahog Parasite Unknown) disease development: II. Defense parameters
- Author
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Perrigault, Mickael, Dahl, Soren F., Espinosa, Emmanuelle Pales, Gambino, Laura, and Allam, Bassem
- Subjects
- *
TEMPERATURE effect , *NORTHERN quahog , *IMMUNITY , *DISEASE progression , *COMMUNICABLE diseases in animals - Abstract
Abstract: Quahog Parasite Unknown (QPX) is a protistan parasite affecting hard clams Mercenaria mercenaria along the Northeastern coast of the United States. The geographic distribution and occurrence of disease epizootics suggests a primary role of temperature in disease development. This study was designed to investigate the effect of temperature on constitutive and QPX-induced defense factors in M. mercenaria. Control and QPX-challenged (both experimentally and naturally) clams were maintained at 13, 21 and 27°C for 4months. Control and experimentally-infected clams originated from a southern broodstock (Florida, no prior reports of disease outbreak) while naturally-infected clams originated from a northern broodstock (Massachusetts, enzootic area). Standard and QPX-specific cellular and humoral defense parameters were assessed after 2 and 4months. Measured parameters included total and differential hemocyte counts, reactive oxygen species production, phagocytic activity of hemocytes, lysozyme concentration in plasma, anti-QPX activity in plasma and resistance of hemocytes to cytotoxic QPX extracellular products. Results demonstrated a strong influence of temperature on constitutive clam defense factors with significant modulation of cellular and humoral parameters of control clams maintained at 13°C compared to 21 and 27°C. Similarly, clam response to QPX challenge was also affected by temperature. Challenged clams exhibited no difference from controls at 27°C whereas different responses were observed at 21°C and 13°C compared to controls. Despite differences in infection mode (experimentally or naturally infected) and clam origin (northern and southern broodstocks), similarities were observed at 13°C and 21°C between QPX infected clams from Florida and Massachusetts. Clam response to temperature and to QPX exhibited interesting relationship with QPX disease development highlighting major influence of temperature on disease development. [Copyright &y& Elsevier]
- Published
- 2011
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81. Effects of temperature on hard clam (Mercenaria mercenaria) immunity and QPX (Quahog Parasite Unknown) disease development: I. Dynamics of QPX disease
- Author
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Dahl, Soren F., Perrigault, Mickael, Liu, Qianqian, Collier, Jackie L., Barnes, Debra A., and Allam, Bassem
- Subjects
- *
TEMPERATURE effect , *NORTHERN quahog , *IMMUNITY , *DISEASE progression , *DISEASE prevalence , *THRAUSTOCHYTRIALES - Abstract
Abstract: Quahog Parasite Unknown (QPX) causes disease and mortality in hard clams, Mercenaria mercenaria. Seasonality of QPX disease prevalence in the field and changes in QPX growth and survival in vitro suggest a role of temperature in the hard clam-QPX interaction and disease development. This study specifically examined the effect of temperature on QPX disease development and dynamics. Naturally and experimentally infected clams were separately maintained in the laboratory at 13°C, 21°C, or 27°C for 4months. Following this initial treatment, temperature was adjusted to 21°C for 5 additional months to simulate seasonal changes of temperature in the field and to investigate the effect of temperature variations on QPX disease dynamics. Mortality was continuously monitored during the experiment and clams were sampled at 2, 4 and 9months for the assessment of QPX disease prevalence and intensity using our standard histological and quantitative PCR techniques. Results demonstrated significantly higher QPX disease prevalence and intensity, as well as higher mortality, in naturally-infected clams maintained at 13°C as compared to those held at 21°C or 27°C. Similarly, disease development was significantly higher in experimentally infected clams maintained at the colder temperature (70% prevalence after 4months) as compared to those maintained under warmer conditions (<10%). Additionally, our results demonstrated an improvement in the condition of clams initially maintained at 13°C for 4months after transfer to 21°C for 5 additional months, with a significant reduction of QPX prevalence (down to 19%). Interestingly, disease development or healing in clams maintained at different temperatures exhibited a strong relationship with clam defense status () and highlighted the impact of temperature on clam activity and QPX disease dynamics. These findings should be taken into account for the timing of activities involving the monitoring, movement (e.g. relays, transplants) or grow out (e.g. commercial culture, municipal enhancement) of hard clams in enzootic areas. [Copyright &y& Elsevier]
- Published
- 2011
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82. Purification and kinetic characteristics of strombine dehydrogenase from the foot muscle of the hard clam (Meretrix lusoria)
- Author
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Lee, An-Chin, Lee, Kuen-Tsung, and Pan, Li-Ying
- Subjects
- *
CLAMS , *DEHYDROGENASES , *ENZYMATIC analysis , *ENZYME activation , *ENZYME inhibitors , *MOLECULAR structure - Abstract
Abstract: Strombine dehydrogenase (SDH, EC 1.5.1.22) from the foot of the hard clam Meretrix lusoria was purified over 470-fold to apparent homogeneity. It has a monomeric structure with a relative molecular mass of 46,000. Two isoenzymes were identified with isoelectric points of 6.83 and 6.88. SDH is heat labile, and has pH and temperature optima of 7.4–7.6 and 45–46°C, respectively. l-Alanine, glycine, and pyruvate are the preferred substrates. l-Serine is the third preferred amino acid. Iminodiacetate with the lowest Ki of SDH at both pH 6.5 and 7.5 was the strongest inhibitor among succinate, acetate, iminodiacetate, oxaloacetate, and l-/d-lactate. The inhibitory activities of succinate at pH 6.5, and iminodiacetate and oxaloacetate at pH 7.5 on the SDH were higher. These inhibitors are either competitive or mixed-competitive inhibitors. Half of the enzymatic activity of SDH was inhibited by 0.2mM Fe3+ and 0.6mM Zn2+. [ABSTRACT FROM AUTHOR]
- Published
- 2011
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83. Genetic relationship of asiatic hard clam populations collected in northern coastal provinces in vietnam based on mtDNA sequence analysis
- Author
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Vu Thi Trang
- Subjects
Mitochondrial DNA ,biology ,Sequence analysis ,Zoology ,Genetic relationship ,Hard clam ,biology.organism_classification - Published
- 2018
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84. Stimpson's hard clam Mercenaria stimpsoni; A multi-decadal climate recorder for the northwest Pacific coast
- Author
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Kaoru Kubota, Kotaro Shirai, Koji Seike, Kazushige Tanabe, Naoko Murakami-Sugihara, and Masataka Hakozaki
- Subjects
010504 meteorology & atmospheric sciences ,Annual growth rate ,Climate ,Mercenaria stimpsoni ,Aquatic Science ,Biology ,010502 geochemistry & geophysics ,Oceanography ,01 natural sciences ,law.invention ,Mercenaria ,Japan ,law ,Atlantic multidecadal oscillation ,Animals ,Radiocarbon dating ,0105 earth and related environmental sciences ,General Medicine ,biology.organism_classification ,Pollution ,Hard clam ,Bay ,Pacific decadal oscillation ,Environmental Monitoring ,Chronology - Abstract
A sclerochronological and radiocarbon-based study of life history traits of Stimpson's hard clam (Mercenaria stimpsoni), collected alive from Funakoshi Bay, northeast Japan, showed the lifespan of the species to be at least 92 years (determined from annual growth line counts). Three M. stimpsoni specimens exhibited the following synchronous growth pattern, suggestive of environmental control; annual increment width increasing after 1955 to a maximum value between 1970 and 1980, subsequently decreasing gradually until 2000, and thereafter remaining constant or increasing slightly. Variations on annual growth patterns, as well as standardized growth indices chronology, were relatively closely linked to the Atlantic Multidecadal Oscillation (AMO), but less so to Pacific Decadal Oscillation (PDO). Carbonate samples collected from ontogenetically younger shell portions, estimated from growth line counts to have been deposited before 1950, contained no nuclear bomb-test radiocarbon, thereby supporting the accuracy of annual growth line counts (versus overcounting from ventral margin). Together with the synchronous annual increment width patterns, this indicated that age and annual growth rate estimations for M. stimpsoni based on growth line counts were reliable and applicable to high-resolution sclerochronological analyses, which should contribute to a deeper understanding of multi-decadal northwest Pacific climate variability.
- Published
- 2018
- Full Text
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85. Role of Biomarkers in Monitoring Brevetoxins in Karenia brevis Exposed Shellfish
- Author
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Kathleen R. El Said, Ann Abraham, and Leanne J. Flewelling
- Subjects
0301 basic medicine ,animal structures ,biology ,030111 toxicology ,010401 analytical chemistry ,Neurotoxic shellfish poisoning ,technology, industry, and agriculture ,Dinoflagellate ,food and beverages ,biology.organism_classification ,01 natural sciences ,0104 chemical sciences ,Microbiology ,03 medical and health sciences ,Brevetoxin ,Karenia brevis ,Hard clam ,Eastern oyster ,Marine toxin ,Shellfish - Abstract
Monitoring and management programs for marine toxins in seafood depend on efficient detection tools for their success in protecting public health. Here we review current methods of detection for neurotoxic shellfish poisoning (NSP) toxins, and current knowledge in brevetoxin metabolism in shellfish. In addition, we discuss a novel approach to developing monitoring tools for NSP toxins in molluscan shellfish. NSP is a seafood-borne disease caused by the consumption of brevetoxin-contaminated shellfish. Brevetoxins are a suite of cyclic polyether compounds found in blooms of the marine dinoflagellate Karenia brevis (K. brevis) and are potent neurotoxins. Preventive controls for NSP in the U.S. currently rely upon environmental monitoring of K. brevis blooms and assessment of their shellfish toxicity by mouse bioassay. The mouse bioassay for NSP approved by National Shellfish Sanitation Program was developed in the 1960s when very little information on the structural and toxicological properties of brevetoxins in algae and shellfish was available. Alternative methods to mouse bioassay based on current scientific knowledge in the area are needed for monitoring NSP toxins. It is now established that brevetoxins are metabolized extensively in shellfish. Algal brevetoxins undergo oxidation and reduction, as well as conjugation with fatty acids and amino acids in shellfish. Recently, three metabolites have been identified as biomarkers of brevetoxin exposure and toxicity in Eastern oyster (Crassostrea virginica) and hard clam (Mercenaria sp.). The role of these biomarkers in monitoring NSP toxins in K. brevis exposed molluscan shellfish is reviewed. Comparisons of biomarker levels by liquid chromatography-mass spectrometry (LC-MS) with composite toxin as measured by enzyme linked immunosorbent assay (ELISA), and shellfish toxicity by mouse bioassay, support the application of these biomarkers as a dynamic and powerful approach for monitoring brevetoxins in shellfish and prevention of NSP.
- Published
- 2018
- Full Text
- View/download PDF
86. Size-dependent pH effect on calcification in post-larval hard clam Mercenaria spp.
- Author
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Waldbusser, George G., Bergschneider, Heather, and Green, Mark A.
- Subjects
HYDROGEN-ion concentration ,CALCIFICATION ,PH effect ,MERCENARIA ,CLAMS ,MARINE sediments - Abstract
The article discusses a study which determined the size-dependent pH effect on calcification in post-larval hard clam Mercenaria spp. using the alkalinity anomaly method. In the study, experimental water acidity was controlled by bubbling with air-carbon dioxide blends to obtain pH values of 8.02, 7.64 and 7.41, which are typically found in many near-shore terrigenous marine sediments. The study found that calcification rate decreased with lower pH in all 5 classes measured, and also a significant effect of size on calcification rate.
- Published
- 2010
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87. Risk-Based Probabilistic Approach to Assess the Impact of False Mussel Invasions on Farmed Hard Clams.
- Author
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Liao, Chung‐Min, Ju, Yun‐Ru, Chio, Chia‐Pin, and Chen, Wei‐Yu
- Subjects
MUSSELS ,FARMS ,CLAMS ,PROBABILITY theory ,AQUACULTURE - Abstract
The purpose of this article is to provide a risk-based predictive model to assess the impact of false mussel Mytilopsis sallei invasions on hard clam Meretrix lusoria farms in the southwestern region of Taiwan. The actual spread of invasive false mussel was predicted by using analytical models based on advection-diffusion and gravity models. The proportion of hard clam colonized and infestation by false mussel were used to characterize risk estimates. A mortality model was parameterized to assess hard clam mortality risk characterized by false mussel density and infestation intensity. The published data were reanalyzed to parameterize a predictive threshold model described by a cumulative Weibull distribution function that can be used to estimate the exceeding thresholds of proportion of hard clam colonized and infestation. Results indicated that the infestation thresholds were 2–17 ind clam
−1 for adult hard clams, whereas 4 ind clam−1 for nursery hard clams. The average colonization thresholds were estimated to be 81–89% for cultivated and nursery hard clam farms, respectively. Our results indicated that false mussel density and infestation, which caused 50% hard clam mortality, were estimated to be 2,812 ind m−2 and 31 ind clam−1 , respectively. This study further indicated that hard clam farms that are close to the coastal area have at least 50% probability for 43% mortality caused by infestation. This study highlighted that a probabilistic risk-based framework characterized by probability distributions and risk curves is an effective representation of scientific assessments for farmed hard clam in response to the nonnative false mussel invasion. [ABSTRACT FROM AUTHOR]- Published
- 2010
- Full Text
- View/download PDF
88. Cytotoxicity of quahog parasite unknown (QPX) toward hard clam (Mercenaria mercenaria) haemocytes and interactions between different pathogen isolates and host strains.
- Author
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Perrigault, Mickael and Allam, Bassem
- Subjects
- *
CLAMS , *PATHOGENIC microorganisms , *TOXICITY testing , *BROOD stock assessment - Abstract
The ability of pathogens to neutralize host defence mechanisms represents a fundamental requisite in the successful establishment of an infection. Host-pathogen interactions between quahog parasite unknown (QPX) and its hard clam host are poorly understood. Our prior in vivo investigations have shown that different QPX isolates display varying levels of pathogenicity toward clams. Similarly, field investigations and laboratory transmission studies revealed some variations in the susceptibility of different hard clam stocks to QPX infection. An in vitro approach was developed in this study to evaluate the toxicity of QPX cells and extracellular products toward haemocytes using a neutral red uptake assay. Results demonstrated that QPX produces virulence factors that are cytotoxic to M. mercenaria haemocytes. This cytotoxicity appears to be induced by clam factors, suggesting that it may play an important role in supporting QPX infection and proliferation within the host. Moreover, application of this technique to different QPX isolates and clam broodstocks indicates variations of QPX cytotoxicity in agreement with previous in vivo experiments, strengthening the existence of different QPX strains. [ABSTRACT FROM AUTHOR]
- Published
- 2009
- Full Text
- View/download PDF
89. Relationships between reproduction in suspension-feeding hard clams Mercenaria mercenaria and phytoplankton community structure.
- Author
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Newell, Roger I. E., Tettelbach, Stephen T., Gobler, Christopher J., and Kimmel, David G.
- Subjects
CLAMS ,PHYTOPLANKTON ,BIOTIC communities ,SUSPENSION feeders ,AQUATIC animals ,BROWN tide ,ALGAL blooms ,REPRODUCTION - Abstract
The article focuses on the variation in hard clam Mercenaria mercenaria reproduction relative to changes in the species composition of the phytoplankton abundance in the U.S. It tests the hypothesis that the fall in the population of hard clam in south shore bays in Long Island, New York was attributed to the alterations in reproduction brought by variations in phytoplankton availability as food resource. It notes that changes in the number, species composition, or timing of phytoplankton blooms can change the quantity and quality of the food available to the suspension-feeding hard clams. It adds that such alterations in food supply can decrease the energy available to adult hard clams.
- Published
- 2009
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90. A Half Century Assessment of Hard Clam, Mercenaria mercenaria, Growth in Narragansett Bay, Rhode Island.
- Author
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Henry, Kelly M. and Nixon, Scott W.
- Subjects
NORTHERN quahog ,CLAMS ,MERCENARIA - Abstract
During the last several decades, the waters of mid Narragansett Bay, Rhode Island have increased in temperature and decreased in chlorophyll concentration, and it is possible that these changes affected the growth and success of a common benthic filter feeder, the hard clam, Mercenaria mercenaria. We determined recent hard clam growth rates through a sclerochronological analysis and compared them to the rich historical record of Narragansett Bay growth rates in order to understand how these opposing changes influenced hard clam growth. We found no significant differences in short-term growth between 1985 and 2000. Long-term juvenile growth showed a significant decrease between the 1960s and 1990s, while long-term adult (mature) growth showed a significant increase over this same time period. While it is not clear why the changes in juvenile and adult growth rates differ, it appears as though the decrease in chlorophyll concentration, together with a change in phytoplankton community composition, increasing water temperature, and an increase in predator abundance, may all have influenced hard clam growth between the 1960s and the 1990s. [ABSTRACT FROM AUTHOR]
- Published
- 2008
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91. ACE-inhibitory peptides identified from the muscle protein hydrolysate of hard clam (Meretrix lusoria)
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Tsai, Jenn-Shou, Chen, Jia-Ling, and Pan, Bonnie Sun
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SOUTHERN quahog , *GEL permeation chromatography , *PROTEIN hydrolysates , *CAPTOPRIL - Abstract
Abstract: The meat of hard clam was extracted using hot water. The residual meat was freeze-dried then hydrolyzed at 50°C for 5h by Protamex (PX). The inhibitory effects of hot water extract and hydrolysate against angiotensin I converting enzyme (ACE) were investigated. The IC50 value of hot water extract and hydrolysate on ACE were 1.090 and 0.036mg/ml, respectively. The PX hydrolysate was separated into five fractions by size exclusion chromatography on a Sephadex G-25 column. The fifth fraction of the hydrolysate having molecular weight ranged 350–300Da showed the highest inhibitory efficiency ratio (IER) being 5831%/(mgml). The amino acid sequence of the inhibitory peptide was Tyr-Asn (IC50 =51μM). The hydrolysate showed mixed-type inhibition kinetics while Captopril, the positive control, showed competitive inhibition on ACE. Their K i values were 0.027mg/ml and 0.0067μg/ml, respectively. [Copyright &y& Elsevier]
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- 2008
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92. Candidates for a hypoxia-stress indicator in the hard clam, Meretrix lusoria
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Lee, An-Chin, Lee, Ming-Cheng, Lee, Yan-Horn, and Lee, Yu-Ching
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ALANINE , *MIMOSINE , *HYPOXEMIA , *PHYSIOLOGICAL effects of oxygen - Abstract
Abstract: The Lt50 (median lethal time) of hard clam Meretrix lusoria exposed to anoxia was 15.7, 9.7, 3.8, 2.8, and 2.5 days at 15, 20, 25, 30, and 34 °C, respectively. The concentration of alanine and succinate was 5.6 and 0.6 μmol/g in the foot, and the concentration of succinate was 1.6 μmol/ml in the body fluid for the clams following 5 days exposure to normoxia at 30 °C. However, the concentration of alanine, succinate, and propionate was 15.6, 9.7, and 1.4 μmol/g in the foot, and 0.58, 35.3, and 3.66 μmol/ml in the body fluid, respectively for the clams following 5 days anoxic exposure at 30 °C. Clams secreted 97.9 nmol/g of succinate, and 76.7 nmol/g of propionate during the anoxic exposure at 30 °C. Similarly, the concentration of alanine, succinate, and propionate was 14.2, 8.9, and 1.3 μmol/g in the foot, and 0.27, 37.9, and 6.1 μmol/ml in the body fluid for the clams following 8 days exposure to anoxia at 15 °C. Clams secreted 18.9 nmol/g of succinate and 103 nmol/g of propionate during anoxic exposure at 15 °C. Clams that were visible at the surface of the sediment (half-buried or fully exposed) showed significantly higher concentration of alanine in the foot, and concentration of succinate in the body fluid than those completely buried in the sediment. It is suggested that the concentration of alanine in the foot greater than 11 μmol/g and the concentration of succinate in the body fluid greater than 4 μmol/ml are considered indicators of hypoxia in hard clams. [Copyright &y& Elsevier]
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- 2008
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93. Predation affects the susceptibility of hard clam Meretrix lusoria to Hg-stressed birnavirus
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Liao, Chung-Min, Yeh, Ching-Hung, and Chen, Szu-Chieh
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PREDATION , *AQUATIC ecology , *SOUTHERN quahog , *POPULATION dynamics , *MERCURY & the environment , *BIOENERGETICS , *ECOSYSTEM management , *STOCHASTIC analysis - Abstract
Predator–prey interaction in aquatic ecosystem is one of the simplest drivers affecting the species population dynamics. Predation controls are recognized as important aspects of ecosystem husbandry and management. In this paper we investigated how predation control cause an increase in host growth in the abundance of hard clam (Meretrix lusoria) populations subject to mercury (Hg)-stressed birnavirus. Here we linked predator–prey relationships with a bioenergetic matrix population model (MPM) associated with a susceptible–infectious–mortality (SIM) model based on a host–pathogen–predator framework to quantify the predator effects on population dynamics of disease in hard clam populations. Our results indicated that relative high predation rates could promote the hard clam abundances in relation to predators that selectively captured the infected hard clam, by which the disease transmission was suppressed. The results also demonstrated that predator-induced modifications in host behavior could have potential negative or positive effects on host growth depending on relative species density and resource dynamics. The most immediate implication of this study for the management of aquatic ecosystem is that, beyond the potential for causing a growth in abundance, predation might provoke greater predictability in aquatic ecosystem species populations and thereby increase the safety of ecosystem production from stochastic environmental events. [Copyright &y& Elsevier]
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- 2008
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94. Effects of components in seawater on the digging behavior of the hard clam (Meretrix lusoria)
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Lee, An-Chin, Lin, Yu-Hsuan, Lin, Chwen-Ru, Lee, Ming-Cheng, and Chen, Yu-Ping
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CLAMS , *SEAWATER , *ANIMAL behavior , *AQUATIC animals - Abstract
Abstract: The clam industry is very important for fishermen in the southwestern part of Taiwan. However, massive die-offs of hard clams unexpectedly and frequently occur during the hot season. This greatly impacts the economic status of these fishermen. Hard clams are benthic organisms, but they usually emerge from the bottom mud after becoming stressed and before dying. Therefore, the digging behavior of hard clams can be used as an indicator of their vitality. In a previous 2-h digging experiment, we found that the concentration of Mg+2 in seawater affected the digging behavior of hard clams. This led us to question whether the salt composition of the seawater had changed and how such changes affected the digging behavior of clams. The percentages of divalent cations in refined salt, crude salt, and saline water from a salt farm and groundwater were much lower than those in artificial seawater (ASW). The salt composition of seawater can be changed by adding those salts or saline water. Hard clams in Mg+2-free ASW and K+-free ASW remained in the sediments at 15 °C, while they emerged at 34 °C. After the inclusion of Mg+2 into the Mg+2-free ASW, hard clams returned to the sediments. All of the hard clams died after being exposed to K+-free ASW for 5 days at 34 °C. Anaerobic end products in the foot (alanine and succinate) and hemolymph (succinate and propionate) of hard clams accumulated after they were exposed to Mg+2-free ASW. This indicates that Mg+2-free ASW induced cellular hypoxia as well as affecting the digging behavior. A possible mechanism of why Mg+2-free ASW causes hard clams to emerge is discussed. Finally, it was concluded that the concentrations of Mg+2 and K+ in ASW are especially important for the vitality of hard clams at high temperatures. [Copyright &y& Elsevier]
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- 2007
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95. The influence of plankton composition and water quality on hard clam (Mercenaria mercenaria L.) populations across Long Island's south shore lagoon estuaries (New York, USA)
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Weiss, Michelle B., Curran, Patrick B., Peterson, Bradley J., and Gobler, Christopher J.
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PLANKTON , *WATER quality , *NORTHERN quahog , *BIOTIC communities - Abstract
Abstract: We conducted a two-year study to assess how plankton composition and water quality impacts the distribution, densities, condition, growth, biochemical composition and reproductive success of juvenile and adult Mercenaria mercenaria (L.) in Long Island''s south shore estuaries (LISSE). Juvenile and adult hard clams were placed in suspended cages at 10 locations ranging from the ocean inlets to locations furthest from inlets in Shinnecock Bay (SB), the eastern-most barrier island estuary of LISSE, and Great South Bay (GSB), the western-most barrier island estuary of LISSE. Phytoplankton community composition, temperature, salinity, dissolved oxygen, and clam growth and condition were monitored bi-weekly. A benthic survey of M. mercenaria densities in both estuaries was also conducted. In both 2004 and 2005, juveniles in central bay locations had significantly faster growth rates, lower mortality rates, and higher lipid content relative to sites closest to the inlets. Adult hard clams closest to the Fire Island inlet also had significantly lower condition indexes compared to mid-bay stations and densities of wild M. mercenaria populations in both estuaries were lower near inlets compared to locations further from inlets. In addition to substantial spatial differences within each estuary, differences were also observed between the embayments as juvenile clams in SB grew approximately twice as fast as those in GSB and adults in SB had significantly greater condition indexes than clams in GSB. Instantaneous juvenile growth rates were highly correlated to temperatures below 24 °C (p <0.0001) and were also significantly correlated with several indicators of suspended food quantity and food quality (centric diatoms, phytoplankton cells >5 μm, and dinoflagellates (inverse correlation)) which co-varied independently of temperature. In sum, these results suggest tidal exchange in LISSE promotes a water quality regime (cold water, with low food concentration) which would reduce the growth of juvenile clams and the overall reproductive success of adult hard clams located near newly-formed ocean inlets. However, increased exchange for regions furthest from inlets could enhance juvenile clam growth rates by reducing summer peak temperatures (>24 °C) and densities of poor food sources (dinoflagellates). [Copyright &y& Elsevier]
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- 2007
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96. Apoptotic-inducing epidioxysterols identified in hard clam (Meretrix lusoria)
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Pan, Min-Hsiung, Huang, Yu-Ting, Chang, Chi-I, Ho, Chi-Tang, and Pan, Bonnie Sun
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CLAMS , *APOPTOSIS , *SILICA gel , *CHROMATOGRAPHIC analysis - Abstract
Abstract: Hard clams (HC), Meretrix lusoria are a popular seafood and traditionally used as a Chinese remedy for liver disease and chronic hepatitis. The goal of this study was to identify compounds from hard clam, which are responsible for inducing apoptosis using bioassay-directed isolation. The effects of ethyl acetate extract of HC (HC-EA) on cell viability in human cancer cells were investigated. The ethyl acetate fraction was then subjected to separation and purification using silica gel column chromatography. The compounds showing strong apoptosis inducing activity were identified by spectral methods as epidioxysterols (EDS). The molecular mechanisms of epidioxysterolds-induced apoptosis as determined by annexin V apoptosis assay, DNA condensation, and sub-G1 DNA were investigated. The results suggest that induction of apoptosis by epidioxysterols may provide a pivotal mechanism for its cancer chemoprevention. [Copyright &y& Elsevier]
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- 2007
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97. Hard clam Meretrix lusoria to Hg-stressed birnavirus susceptibility revealed through stage-structured disease transmission dynamics
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Liao, Chung-Min and Yeh, Ching-Hung
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NORTHERN quahog , *CLAMS , *MERCURY content of fish , *BACTERIAL diseases in fishes - Abstract
Abstract: The purpose of this study was to assess the effects of mercury (Hg) on birnavirus infection in the farmed hard clam (Meretrix lusoria) populations. A stage-structured matrix population model was linked with a nonlinear epidemiological dynamics of host–pathogen model to quantify the effects of increased Hg-stressed birnavirus on population dynamics of disease in hard clam populations. Bioenergetics was incorporated into population stage-structured model to enhance life cycle toxicity assessment on constraining reproduction and growth in life stages of hard clams. We delineated three qualitatively distinct scenarios of virus only, Hg+virus, and virus+Hg. Within a range of disease transmissibility drawn from analysis of Hg-stressed birnavirus in hard clams, different transmissibility led to simulated outbreaks characterized by basic reproductive number (R 0) depicting the allowance population numbers to contain disease spread for all three scenarios. This study suggested that recognizing which of the scenarios best describing a situation in the field could aid in planning disease management and in choosing the most efficient and feasible strategy. The present simple model captured the essential dynamics and its flexible enough to integrate effects occurring at varying temporal scales based on biologically plausible and empirically grounded dynamical models. We were confident that the model could be easily adapted for other aquaculture species and encourage researchers to use the model to diagnose the population-level risk of toxic chemical-stressed pathogen on these species. [Copyright &y& Elsevier]
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- 2007
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98. Cloning and expression of metallothionein cDNA in the hard clam (Meretrix lusoria) upon cadmium exposure
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Chang, Yi Ting, Jong, Koa Jen, Liao, Bo Kai, and Wu, Su Mei
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METALLOTHIONEIN , *MESSENGER RNA , *PHYSIOLOGICAL effects of cadmium , *CLAMS - Abstract
Abstract: The objective of this study was to determine whether metallothionein (MT) expression was related to Cd accumulation in hard clams (Meretrix lusoria). We cloned clam MT. Then a specific primer for the hard clam was designed for MT mRNA measurements using real-time PCR. The hard clams were exposed to 50, 200, and 1000 μg/L cadmium (Cd) for 1, 3, 5, and 7 days, to determine the relationship between MT mRNA relative quantity (RQ) levels and Cd accumulation. The following results were obtained: (1) the cloned MT, consisting of 228 bp encoding a protein of 76 amino acids showed higher than 55% identity with the deduced amino acid sequence previously published for another bivalve. (2) Both MT mRNA expression and Cd accumulation appeared to be dose-responsive following cadmium treatment for 1, 3 and 5 days, respectively; however, no time-dependent responses were found. According to these results, MT mRNA expression levels can be used as an indicator to monitor the concentrations of Cd in aquaculture farms. [Copyright &y& Elsevier]
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- 2007
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99. Optimum sediment composition and rearing density for hard clam, Meretrix petechialis Lamarck culture based on immunological responses of hemocyte
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Beom Joo Kim, Woo Sik Kim, Joon Yeong Kwon, In Joon Hwang, Hyun Jeong Lim, and Joo Hyeon Yoon
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Hemocyte ,Meretrix petechialis ,Zoology ,Sediment ,Composition (visual arts) ,Biology ,Hard clam ,biology.organism_classification - Published
- 2017
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100. Development and evaluation of a set of 135 EST-SNP markers in the transcriptome dataset of hard clam, Meretrix meretrix
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Wenbin Ruan, Yan Jing, Yinghui Dong, He Lin, Hanhan Yao, and Zhihua Lin
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0301 basic medicine ,Genetics ,Genetic diversity ,Expressed sequence tag ,biology ,Single-nucleotide polymorphism ,biology.organism_classification ,Minor allele frequency ,Transcriptome ,03 medical and health sciences ,symbols.namesake ,030104 developmental biology ,Bonferroni correction ,symbols ,SNP ,Hard clam ,Ecology, Evolution, Behavior and Systematics - Abstract
The single nucleotide polymorphism (SNP) markers for the hard clam, Meretrix meretrix, are currently limited as the expressed sequence tags (ESTs), which are the main sequence resource, are insufficient. A massive amount of the ESTs generated from the transcriptome for this clam have made possible the rapid development of the high-throughput SNP markers. In the present study, we identified 135 SNPs from the transcriptome dataset of M. meretrix using high-resolution melting (HRM) analysis. The genetic parameter analysis of these markers showed that their observed heterozygosities ranged from 0.0000 to 0.7667 with an average of 0.3225, whereas their expected heterozygosities ranged from 0.3045 to 0.5085 with an average of 0.4615. The minor allele frequency of these markers varied from 0.1833 to 0.5000. Of the 135 SNPs, the nucleotides A/G (31.9%) and C/T (28.9%) accounted for a high percentage. 56 SNPs showed significant deviation from the Hardy–Weinberg equilibrium (P
- Published
- 2017
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