Search

Recent research has shown that the distribution of biogenic nitrogen and sulfur compounds (in particular, N 2 O, DMS and dissolved DMSO) observed in five perennially ice-covered lakes of the McMurdo Dry Valleys, Antarctica, appear to lack obvious biogeochemical explanations. This study examined the hypothesis that the distribution of these compounds resulted from thermodynamic constraints on microbially mediated processes. The thermodynamic favorableness of a number of ecologically important redox reactions in these lakes was assessed using a simplified Nernst equation and mathematically modified E h measurements. Our qualitative analysis revealed that the relative dominance of denitrification and nitrification as formation and loss processes for N 2 O was a complex pattern that was related to the redox conditions present. The results indicate that nitrification was initially the sole pathway for the formation of N 2 O with denitrification being thermodynamically unfavorable. As the redox conditions becam...

Over the last two decades, escalating rates of coastal development have altered macro- and micronutrient loading patterns to many southeastern U.S. estuaries. This study addresses a potential consequence of urbanization-associated coastal deforestation that may have important implications for estuarine ecosystem productivity: a reduction in bioavailable Fe. We compared the potential for Fe limitation at representative sites in two neighboring South Carolina salt marsh estuaries, one (“Parsonage Creek” site in Murrells Inlet estuary) impacted by urbanization-associated clear-cutting, and the other (“Oyster Landing” site in North Inlet estuary) undeveloped and surrounded by forests. The urbanized estuarine site was marked by lower dissolved Fe concentrations compared to the forested estuarine site. In bioassay experiments conducted from 1996 to 1999, the addition of chelated Fe to natural phytoplankton populations stimulated chlorophyll a concentrations in water from Parsonage Creek on 6 of 11 sampling dates. Chlorophyll responses in Oyster Landing water also were observed on two of those sampling times, dates that followed periods of relatively low rainfall. In one experiment, the addition of Fe+NO 3 − to Parsonage Creek water led to significantly higher chlorophyll concentrations than when NO 3 − was added alone, but Fe+NH 4 + addition did not result in higher chlorophyll than NH 4 + addition alone. It was hypothesized that the difference in NO 3 − and NH 4 + responses was related to a greater tendency towards Si depletion in Fe-stressed NO 3 − -grown samples, or alternatively, to the higher Fe requirement for NO 3 − assimilation relative to that needed for NH 4 + assimilation. In bioassay experiments using Fe-deplete semi-continuous cultures of Synechococcus WH8101, Fe addition did not affect the net growth rate of cultures transferred to water from either estuary, but increased the chlorophyll a content of cells transferred to Parsonage Creek water. Finally, photosynthesis vs. irradiance parameters ( α , P max ) obtained from Oyster Landing samples ( Synechococcus continuous cultures, while the same parameters derived from Parsonage Creek samples were much lower and comparable to those from Fe-deplete cultures. The results indicate that phytoplankton population growth from high salinity salt marsh estuaries can be Fe-limited. Also, the potential for Fe limitation was more prevalent in a urbanized deforested estuary than in an undeveloped forested estuary, consistent with the hypothesis that organically bound Fe from coastal forests plays an important role in supplying Fe for the growth of estuarine phytoplankton.

Studies in high nutrient, low chlorophyll (HNLC) regions have demonstrated that increased Fe availability results in an increase in phytoplankton biomass and changes in community composition. Here we present experiments in which the availability of iron (Fe) was increased or reduced to monitor the response of individual groups of phytoplankton (large eukaryotes, pico- eukaryotes and cyanobacteria) by flow cytometry. Additions (0.5 to 5.0 nM Fe) and reductions in available Fe (through addition of 1 to 10 nM of the fungal siderophore desferrioxamine B) were made to enclosed communities from the South American eastern boundary current off Peru, where ambi- ent dissolved Fe concentrations were

Phytoplankton pigments were measured using HPLC during non-ENSO conditions in mid-summer along a South Pacific transect from 67° S to the equator along 170° W. Highest concen- trations of chlorophyll a (chl a) occurred in the Polar and the Subtropical Fronts (PF and STF, respec- tively) with concentrations exceeding 500 ng l -1 . In the STF, there was a distinct subsurface chl a maximum (SCM) at 40 m, which gradually deepened northward to 120 m in the Subtropical Conver- gence Zone. Northwards, the SCM shoaled to about 30 m in the Equatorial Zone (EZ). Relatively high concentrations of fucoxanthin and 19'-butanoyloxyfucoxanthin occurred in the nutrient-rich waters south of the Subantarctic Front, and CHEMTAX analyses indicated that diatoms, chrysophytes, pelagophytes, and haptophytes dominated the phytoplankton assemblage. Northward of the PF to the STF, where silicate concentrations were

Inputs of low concentrations of new and regenerated forms of nitrogen (≤1 µM) have large impacts on phytoplankton community structure and ocean biogeochemistry in the oligotrophic central gyres. However, current manipulative experimental methods cannot effectively simulate low-level, continuous supplies of nitrate, such as those from upwelling or eddy events, or steady-state inputs of regenerated ammonium and dissolved organic nitrogen from zooplankton grazing. Using a new shipboard continuous culture system based on laboratory chemostat methodology, we compared the effects of a continuous supply of 1 µM nitrate, ammonium, and urea-N at a dilution rate of 0.5 d−1 on algal community composition in the North Atlantic. In the Gulf Stream, continuous inputs of 1 µM nitrate dramatically changed phytoplankton community structure from dominance by cyanobacteria to dominance by diatoms. Equimolar continuous supplies of ammonium resulted in much smaller increases in total phytoplankton biomass, and favored a community co-dominated by diatoms and cyanobacteria, and promoted the growth of pelagophytes. In the Sargasso Sea, continuous 1 µM urea-N inputs greatly increased the biomass and dominance of Synechococcus relative to the initial community and compared with control and 1 µM nitrate additions. The shipboard natural community continuous culture system is uniquely suited for realistically simulating inputs of low levels of limiting nutrients, allowing new types of prognostic enrichment experiments that give novel insights into the processes that control phytoplankton community structure in the ocean.

We investigated phytoplankton Fe limitation using shipboard incubation experiments in the high-nutrient South American eastern boundary current regime. Low ambient Fe concentrations (;0.1 nM) in water collected from the Humboldt and Peru Currents were supplemented with a range of added Fe levels up to 2.5 nM. Phytoplankton chlorophyll a, photosystem II photosynthetic efficiency, and nitrate and phosphate drawdown increased in proportion to the amount of Fe added. The Humboldt Current algal community after Fe additions included colonial and flagellated Phaeocystis globosa and large pennate diatoms, whereas the Peru Upwelling assemblage was dominated by coccolithophorids and small pennate diatoms. Apparent half-saturation constants for growth of the two communities were 0.17 nM Fe (Humboldt Current) and 0.26 nM Fe (Peru Upwelling). Net molar dissolved Si(OH)4 : NO drawdown ratios were low in both experiments (;0.2‐0.7), but net particulate silica to nitrogen production 2 3 ratios were higher. Fe limitation decreased net NO : PO utilization ratios in the Humboldt Current incubation to 2 32 34 well below Redfield values. Phytoplankton community sinking rates were decreased by Fe additions in the Peru Upwelling, suggesting potential Fe effects on carbon export. Our results confirm that primary producers in the Peru Upwelling/Humboldt Current system can be limited by Fe, but the biological and biogeochemical consequences of Fe limitation differ from Fe-limited California coastal upwelling waters that have been previously studied.

We report the results of a field incubation experiment demonstrating a substantial shift in the taxonomic composition of Equatorial Pacific phytoplankton assemblages exposed to CO2 levels of 150 and 750 ppm (dissolved CO2 ~3 to 25 µM). By the end of the experiment, the phytoplankton community in all samples was dominated by diatoms and Phaeocystis sp. However, the relative abun- dance of these phytoplankton taxa differed significantly between CO2 treatments. Taxonomic pig- ment analysis and direct microscopic examination of samples revealed that the abundance of diatoms decreased by ~50% at low CO2 relative to high CO2, while the abundance of Phaeocystis increased by ~60% at low CO2. This CO2-dependent shift was associated with a significant change in nutrient utilization, with higher ratios of nitrate:silicate (N:Si) and nitrate:phosphate (N:P) consumption by phytoplankton in the low CO2 treatment. Despite the significant changes in taxonomic composition and nutrient consumption ratios, total biomass and primary productivity did not differ significantly between the CO2 treatments. Our results suggest that CO2 concentrations could potentially influence competition among marine phytoplankton taxa and affect oceanic nutrient cycling.

Proteomics has great potential for studies of marine microbial biogeochemistry, yet high microbial diversity in many locales presents us with unique challenges. We addressed this challenge with a targeted metaproteomics workflow for NtcA and P-II, two nitrogen regulatory proteins, and demonstrated its application for cyanobacterial taxa within microbial samples from the Central Pacific Ocean. Using METATRYP, an open-source Python toolkit, we examined the number of shared (redundant) tryptic peptides in representative marine microbes, with the number of tryptic peptides shared between different species typically being 1% or less. The related cyanobacteria Prochlorococcus and Synechococcus shared an average of 4.8 ± 1.9% of their tryptic peptides, while shared intraspecies peptides were higher, 13 ± 15% shared peptides between 12 Prochlorococcus genomes. An NtcA peptide was found to target multiple cyanobacteria species, whereas a P-II peptide showed specificity to the high-light Prochlorococcus ecotype. Distributions of NtcA and P-II in the Central Pacific Ocean were similar except at the Equator likely due to differential nitrogen stress responses between Prochlorococcus and Synechococcus. The number of unique tryptic peptides coded for within three combined oceanic microbial metagenomes was estimated to be ∼4 × 10(7) , 1000-fold larger than an individual microbial proteome and 27-fold larger than the human proteome, yet still 20 orders of magnitude lower than the peptide diversity possible in all protein space, implying that peptide mapping algorithms should be able to withstand the added level of complexity in metaproteomic samples.

Various life cycle stages of cyst-producing dinoflagellates often appear differently colored under the microscope; gametes appear paler while zygotes are darker in comparison to vegetative cells. To compare physiological and photochemical competency, the pigment composition of discrete life cycle stages was determined for the common resting cyst-producing dinoflagellate Scrippsiella lachrymosa. Vegetative cells had the highest cellular pigment content (25.2 ± 0.5 pg · cell(-1) ), whereas gamete pigment content was 22% lower. The pigment content of zygotes was 82% lower than vegetative cells, even though they appeared darker under the microscope. Zygotes of S. lachrymosa contained significantly higher cellular concentrations of β-carotene (0.65 ± 0.15 pg · cell(-1) ) than all other life stages. Photoprotective pigments and the de-epoxidation ratio of xanthophylls-cycle pigments in S. lachrymosa were significantly elevated in zygotes and cysts compared to other stages. This suggests a role for accessory pigments in combating intracellular oxidative stress during sexual reproduction or encystment. Resting cysts contained some pigments even though chloroplasts were not visible, suggesting that the brightly colored accumulation body contained photosynthetic pigments. The differences in pigmentation between life stages have implications for interpretation of pigment data from field samples when sampled during dinoflagellate blooms.

Shipboard bottle incubation experiments were performed to investigate the effects of iron, light, and silicate on algal production of particulate dimethylsulfoniopropionate (DMSPp) in the Subantarctic Zone (SAZ) south of Tasmania during March 1998. Iron enrichment resulted in threefold to ninefold increases in DMSPp concentrations relative to control treatments, following 7 and 8-day incubation experiments. Additions of Fe and Si preferentially stimulated the growth of lightly-silicified pennate diatoms and siliceous haptophytes, respectively, to which we attribute the increased DMSPp production in the incubation bottles. Both of these algal groups were previously believed to be low DMSPp producers; however, our experimental data suggest that addition of iron and silicate to the low-silicate low-iron waters of the SAZ will result in increased production of DMSPp by lightly silicified diatoms and siliceous haptophytes, respectively. Increased irradiance enhanced DMSPp production in iron-amended treatments with both low (0.5 nM) and high (5 nM) concentrations of added iron. However, the role of light in stimulating DMSPp production was apparently of secondary importance compared to the effects of iron addition. The combination of high irradiance and high iron enrichment produced the highest DMSPp production in the experiments, suggesting that iron and light may have a synergistic effect in limiting algal DMSPp production in subantarctic waters.

The influence of irradiance and iron (Fe) supply on phytoplankton processes was investigated, north (47S, 142E) and south (54S, 142E) of the Subantarctic Front in austral autumn (March 1998). At both sites, resident cells exhibited nutrient stress (Fv/ Fm 0.3). Shipboard perturbation experiments examined two light (mean in situ and elevated) and two Fe (nominally 0.5 and 3 nM) treatments under silicic acid-replete conditions. Mean in situ light levels (derived from incident irradiances, mixed layer depths (MLDs), wind stress, and a published vertical mixing model) differed at the two sites, 25% of incident irradiance I 0 at 47S and 9% I 0 at 54S because of MLDs of 40 (47S) and 90 m (54S), when these stations were occupied. The greater MLD at 54S is reflected by tenfold higher cellular chlorophyll a levels in the resident phytoplankton. In the 47S experiment, chlorophyll a levels increased to 1 gL 1 only in the high-Fe treatments, regardless of irradiance levels, suggesting Fe limitation. This trend was also noted for cell abundances, silica production, and carbon fixation rates. In contrast, in the 54S experiment there were increases in chlorophyll a (to 2 gL 1 ), cell abundances, silica production, and carbon fixation only in the high-light treatments to which Fe had been added, suggesting that Fe and irradiance limit algal growth rates. Irradiance by altering algal Fe quotas is a key determinant of algal growth rate at 54S (when silicic acid levels are nonlimiting); however, because of the integral nature of Fe/light colimitation and the restricted nature of the current data set, it was not possible to ascertain the relative contributions of Fe and irradiance to the control of phytoplankton growth. On the basis of a climatology of summer mean MLD for subantarctic (SA) waters south of Australia the 47 and 54S sites appear to represent minimum and maximum MLDs, where Fe and Fe/ irradiance, respectively, may limit/colimit algal growth. The implications for changes in the factors limiting algal growth with season in SA waters are discussed.

Subantarctic Southern Ocean surface waters in the austral summer and autumn are characterized by high concentrations of nitrate and phosphate but low concentrations of dissolved iron (Fe, ∼0.05 nM) and silicic acid (Si

We investigated the hydrography, nutrients, and dissolved and particulate carbon pools in the western Pacific sector of the Antarctic Circumpolar Current (ACC) during austral summer 1996 to assess the region's role in the carbon cycle. Low fCO2 values along two transects indicated that much of the study area was a sink for atmospheric CO2. The fCO2 values were lowest near the Polar Front (PF) and the Subtropical Front (STF), concomitant with maxima of chlorophyll a and particulate and dissolved organic carbon. The largest biomass accumulations did not occur at fronts, which had high surface geostrophic velocities (20–51 cm s−1), but in relatively low velocity regions near fronts or in an eddy. Thus vertical motion and horizontal advection associated with fronts may have replenished nutrients in surface waters but also dispersed phytoplankton. Although surface waters north of the PF have been characterized as a “high nutrient-low chlorophyll” region, low silicic acid (Si) concentrations (2–4 μM) may limit production of large diatoms and therefore the potential carbon flux. Low concentrations (4–10 μM Si) at depths of winter mixing constrain the level of Si replenishment to surface waters. It has been suggested that an increase in aeolian iron north of the PF may increase primary productivity and carbon export. Our results, however, indicate that while diatom growth and carbon export may be enhanced, the extent ultimately would be limited by the vertical supply of Si. South of the PF, the primary mechanism by which carbon is exported to deep water appears to be through diatom flux. We suggest that north of the PF, particulate and dissolved carbon may be exported primarily to intermediate depths through subduction and diapycnal mixing associated with Subantarctic Mode Water and Antarctic Intermediate Water formation. These physical-biological interactions and Si dynamics should be included in future biogeochemical models to provide a more accurate prediction of carbon flux.

Dissolved iron and manganese and total dissolvable iron were measured in water column samples collected from the polynya region of the southern Ross Sea during cruises in November–December 1994 (spring 1994) and December 1995 to January 1996 (summer 1995). Iron and manganese addition bottle incubation experiments were also performed during these cruises in order to assess the nutritional sufficiency of ambient iron and manganese concentrations for growth of the phytoplankton community. Generally high dissolved iron concentrations (>0.5 nM) and relatively complex iron and manganese vertical profiles were obtained during the spring 1994 cruise, compared with the summer 1995 data. Dissolved iron concentrations in the upper water column averaged 1.0 nM during spring 1994 and 0.23 nM in summer 1995, excluding two stations where concentrations exceeding 1 nM are attributed to inputs from melting sea ice. The observed differences in the distribution of iron and manganese between spring 1994 and summer 1995 are attributed to seasonal decreases in the up welling of bottom waters and melting of sea ice, which supply these metals into the upper water column, combined with the cumulative removal of iron and manganese from the water column throughout the spring and summer, due to biological uptake, vertical export and scavenging by suspended and sinking particles. Results of the metal addition bottle incubation experiments indicate that ambient dissolved iron concentrations are adequate for phytoplankton growth requirements during the spring and early summer, when algal production is highest and Phaeocystis antarctica dominates the algal community, whereas low dissolved iron concentrations limit algal community growth later in the summer, except in the stratified, iron-enriched waters near melting sea ice, where diatoms are able to bloom. Our observations and the inferred seasonal distributions of P. antarctica and diatoms in these waters suggest that iron availability and vertical mixing (i.e., irradiance) exert the primary controls on phytoplankton growth and community structure in the southern Ross Sea during the spring and summer.

Patterns of nutrient utilization and primary productivity (PP) in late austral spring and early summer in the southwestern Ross Sea were characterized with respect to phytoplankton taxonomic composition, polynya dynamics, and upper ocean hydrography during the 1996–1997 oceanographic program Research on Ocean-Atmosphere Variability and Ecosystem Response in the Ross Sea. Phytoplankton biomass in the upper 150 m of the water column ranged from 40 to 540 mg chlorophyll a (Chl a) m−2, exceeding 200 mg Chl a m−2 everywhere except the extreme northern and eastern boundaries of the Ross Sea polynya. Diatom biomass was greatest in the shallow mixed layers of Terra Nova Bay, while the more deeply mixed waters of the Ross Sea polynya were dominated by Phaeocystis antarctica. Daily production computed from the disappearance of NO3 (1.14 g C m−2 d−1) and total dissolved inorganic carbon (TDIC, 1.29 g C m−2 d−1) is consistent with estimates made from an algorithm forced with satellite measurements of Chl a (1.25 g C m−2 d−1) and from measurements of 14C uptake (1.33 g C m−2 d−1). Phytoplankton PP in the Ross Sea averaged 100 g C m−2 yr−1 during 1996–1997. Despite the early formation of the Terra Nova Bay polynya the diatom bloom there did not reach its peak PP until middle to late January 1997 (most likely because of more intense wind mixing in November), ∼6 weeks after the P. antarctica bloom in the Ross Sea polynya had reached the same stage of development. From 70 to 100% of the C and N deficits in the upper 150 m could be accounted for by particulate organic matter, indicating that there had been little dissolved organic matter production or export of particulate material prior to our cruise. This suggests that early in the season, PP and zooplankton grazing are decoupled in the southwestern Ross Sea. The NO3∶PO4 disappearance ratio in waters dominated by P. antarctica (19.0±0.61) was significantly greater than in waters where diatoms were most common (9.52±0.33), and both were significantly different from the Redfield N∶P ratio of 16. Vertical profiles of TDIC suggest that P. antarctica took up 110% more CO2 per mole of PO4 removed than did diatoms, an important consideration for climate models that estimate C uptake from the removal of PO4.

The Southern Ocean is very important for the potential sequestration of carbon dioxide in the oceans1 and is expected to be vulnerable to changes in carbon export forced by anthropogenic climate warming2. Annual phytoplankton blooms in seasonal ice zones are highly productive and are thought to contribute significantly to pCO2 drawdown in the Southern Ocean. Diatoms are assumed to be the most important phytoplankton class with respect to export production in the Southern Ocean; however, the colonial prymnesiophyte Phaeocystis antarctica regularly forms huge blooms in seasonal ice zones and coastal Antarctic waters3. There is little evidence regarding the fate of carbon produced by P. antarctica in the Southern Ocean, although remineralization in the upper water column has been proposed to be the main pathway in polar waters4,5. Here we present evidence for early and rapid carbon export from P. antarctica blooms to deep water and sediments in the Ross Sea. Carbon sequestration from P. antarctica blooms may influence the carbon cycle in the Southern Ocean, especially if projected climatic changes lead to an alteration in the structure of the phytoplankton community6,7.

In March 1998 we measured iron in the upper water column and conducted iron- and nutrient-enrichment bottle-incubation experiments in the open-ocean Subantarctic region southwest of Tasmania, Australia. In the Subtropical Convergence Zone (∼42°S, 142°E), silicic acid concentrations were low (< 1.5 µM) in the upper water column, whereas pronounced vertical gradients in dissolved iron concentration (0.12-0.84 nM) were observed, presumably reflecting the interleaving of Subtropical and Subantarctic waters, and mineral aerosol input. Results of a bottle-incubation experiment performed at this location indicate that phytoplankton growth rates were limited by iron deficiency within the iron-poor layer of the euphotic zone. In the Subantarctic water mass (∼46.8°S, 142°E), low concentrations of dissolved iron (0.05-0.11 nM) and silicic acid (< 1 µM) were measured throughout the upper water column, and our experimental results indicate that algal growth was limited by iron deficiency. These observations suggest that availability of dissolved iron is a primary factor limiting phytoplankton growth over much of the Subantarctic Southern Ocean in the late summer and autumn.

Although Fe limitation is well documented in open ocean high -nutrient, low -chlorophyll (HNLC) areas, little is known about the potential for Fe limitation in coastal environments. We present a series of four Fe addition experiments that demonstrate varying degrees of Fe limitation in the central California coastal upwelling area. Fe concentrations vary widely here ( 8.0 nM) because inputs from rivers and resuspended shelf sediments are unevenly distributed. The biological response to Fe availability is also extremely variable. Fe-replete areas experience extensive blooms of large diatoms and almost complete depletion of nutrients. In slightly Fe-stressed areas, Fe limits the growth of large diatoms but does not control nutrient biogeochemistry or growth of other planktonic organisms. In severely Fe-limited waters, Fe exerts a fundamental control on nitrate and silicic acid drawdown, particulate organic carbon production, and the growth of phytoplankton, zooplankton, and bacteria. We propose a four -level classification scheme for Fe limitation in coastal California waters. Each level is characterized by a set of specific biological and biogeochemical responses to Fe. Parameters that show a characteristic response to Fe addition and thus define a region's Fe limitation status include particulate Si:N and Si:C production ratios, NO3− and H2SiO3 drawdown, C fixation, large diatom and picoplankton growth, bacterial production, and zooplankton grazing and biomass. Fe limitation of coastal upwelling regions needs to be recognized as an important biogeochemical process that could profoundly affect global new production and carbon cycling. The physical, chemical, and biological complexity of coastal upwelling regimes requires that Fe limitation effects be addressed with a more sophisticated approach than has generally been used to describe oceanic HNLC regimes.

During summer 1995–96, we measured iron in the water column and conducted iron-enrichment bottle-incubation experiments at a station in the central Ross Sea (76°30′S, 170°40′W), first, in the presence of melting sea ice, and 17 days later, in ice-free conditions. We observed a striking temporal change in mixed-layer dissolved iron concentrations at this station, from 0.72–2.3 nM with sea ice present, to 0.16–0.17 nM in ice-free conditions. These changes were accompanied by a significant drawdown in macronutrients and an approximate doubling of algal (diatom) biomass. Our incubation experiments suggest that conditions were iron-replete in the presence of sea ice, and iron-deficient in the absence of sea ice. We surmise that bioavailable iron was released into seawater from the melting sea ice, stimulating phytoplankton production and the biological removal of dissolved iron from the mixed layer, until iron-limited conditions developed. These observations suggest that the episodic release of bioavailable iron from melting sea ice is an important factor regulating phytoplankton production, particularly ice-edge blooms, in seasonally ice-covered Antarctic waters.

Viruses play a key role in controlling the population dynamics of algae, including Emiliania huxleyi, a globally distributed haptophyte with calcite coccoliths that comprise ca. 50% of the sinking carbonate flux from the surface ocean. Emiliania huxleyi viruses (EhVs) routinely infect and terminate E. huxleyi blooms. EhVs are surrounded by a lipid envelope, which we found to be comprised largely of glycosphingolipids (GSLs) with lesser amounts of polar glycerolipids. Infection appears to involve membrane fusion between the virus and host, and we hypothesized that specific polar lipids may facilitate virus attachment. We identified three novel intact polar lipids in E. huxleyi strain CCMP 374 and EhV86, including a GSL with a monosaccharide sialic acid headgroup (sGSL); for all 11 E. huxleyi strains we tested, there was a direct relationship between sGSL content and sensitivity to infection by EhV1, EhV86 and EhV163. In mesocosms, the E. huxleyi population with greatest initial sGSL content had the highest rate of virus-induced mortality. We propose potential physiological roles for sGSL that would be beneficial for growth but leave cells susceptible to infection, thus furthering the discussion of Red Queen-based co-evolution and the cost(s) of sensitivity and resistance in the dynamic E. huxleyi-EhV system.

The temporal and spatial patterns of phytoplankton biomass, productivity, and particulate matter composition in the Ross Sea were assessed during cruises in January 1990 and February 1992. Biomass and primary productivity in the southern Ross Sea were greatest during mid-January, with surface chlorophyll concentrations, particulate organic carbon levels, and integrated primary productivity averaging 4.9 μg L−1, 0.54 mg L−1 and 2.63 g C m−2 d−1, respectively. Comparable mean concentrations and rates for February were 1.1 μg L−1, 0.29 mg L−1, and 0.78 g C m−2 d−1 (decreases of 76, 46, and 70%, respectively), indicative of the scale of temporal changes. A distinct south-north transition also was observed both in productivity and phytoplankton biomass, with the lowest values occurring in the northern Ross Sea. East-west gradients in phytoplankton biomass and composition occurred within the southern Ross Sea. The areal productivity of the Ross Sea ranged from 0.15 to 2.85 g C m−2 d−1 and is among the highest found in the entire Antarctic. Carbon:chlorophyll ratios were uniformly high but were highest (150) in 1990 in the diatom-dominated western Ross Sea. Surface growth rates were modest, averaging less than 0.2 day−1 during both seasons. We hypothesize that the marked seasonality in the region provides an environment in which net growth rates, although slow, are maximized through low loss rates and which allows biomass to accumulate in the surface layer. Furthermore, the temporal variations are quantitatively similar to the observed spatial variations. Therefore the dominant determinant of phytoplankton biomass and productivity at any one point on the Ross Sea continental shelf is the stage of the seasonal growth cycle.

The distribution of phytoplankton biomass and pigments was determined in the Ross Sea during late austral summer 1992. Large gradients in biomass were noted both in the east-west and north-south direction, with maximum particulate matter concentrations occurring in the southwest portion of the Ross Sea. Two xanthophyll pigments dominated the profiles, fucoxanthin (indicative of diatoms) and 19′ hexanoyloxyfucoxanthin (hex) (indicative of the prymnesiophyte Phaeocystis antarctica). Fucoxanthin concentrations were greatest near the coast of Victoria Land and within the northern transect, whereas hex concentrations were highest offshore in the SE Ross Sea. Particulate carbon:chlorophyll a (POC:chl) ratios in diatom-dominated waters of the western Ross Sea were relatively high (210). The POC:chl ratio for Phaeocystis antarctica populations from the SE Ross Sea was substantially less (92) than the ratios observed in diatom-dominated waters. Pigment 14C labeling indicated that phytoplankton carbon in the diatom-dominated northern Ross Sea accounted for approximately 30% of the POC, with a phytoplankton C:chl ratio of 130. Short-term (24 hour) vertical fluxes of pigments ranged from 3 to 40 μg chl a m−2 d−1. Diatom-dominated regions had greater fluxes of phaeophorbides, suggesting that metazoans were the most important grazers at these locations. In contrast, the phaeophytin/total phaeopigment ratio was highest in waters dominated by Phaeocystis antarctica. The distribution of phytoplankton biomass and pigments revealed a spatially variable distribution of taxa, one which clearly has important consequences to food-web dynamics, biogeochemical cycles, and vertical flux patterns in the Ross Sea.

Dimethylsulfide (DMS), particulate dimethylsulfoniopropionate (DMSPp) and phytoplankton pigments were measured on three transects in the Ross Sea, Antarctica during February 1992. Although relatively low chl a levels (mean of 0.7 μg l−1) were encountered, the DMS inventory in the photic zone ranged from 81 to 3484 μol m−2. In comparison, the DMSOp standing stock was very low (range of 13–298μol m−2) and accounted for only 11% of the average integrated DMS concentration. DMS:chl a ratios (58–78 nmol μg−1) were significantly higher in waters dominated by Phaeocystis antarctica compared to diatom-dominated waters (2–12 nmol μg−1). A strong DMS gradient was observed from south to north with the highest DMS concentrations (123 nM) measured in the southern Ross Sea and the lowest (

[1] The Ross Sea polynya is among the most productive regions in the Southern Ocean and may constitute a significant oceanic CO2 sink. Based on results from several field studies, this region has been considered seasonally iron limited, whereby a “winter reserve” of dissolved iron (dFe) is progressively depleted during the growing season to low concentrations (∼0.1 nM) that limit phytoplankton growth in the austral summer (December–February). Here we report new iron data for the Ross Sea polynya during austral summer 2005–2006 (27 December–22 January) and the following austral spring 2006 (16 November–3 December). The summer 2005–2006 data show generally low dFe concentrations in polynya surface waters (0.10 ± 0.05 nM in upper 40 m, n = 175), consistent with previous observations. Surprisingly, our spring 2006 data reveal similar low surface dFe concentrations in the polynya (0.06 ± 0.04 nM in upper 40 m, n = 69), in association with relatively high rates of primary production (∼170–260 mmol C m−2 d−1). These results indicate that the winter reserve dFe may be consumed relatively early in the growing season, such that polynya surface waters can become “iron limited” as early as November; i.e., the seasonal depletion of dFe is not necessarily gradual. Satellite observations reveal significant biomass accumulation in the polynya during summer 2006–2007, implying significant sources of “new” dFe to surface waters during this period. Possible sources of this new dFe include episodic vertical exchange, lateral advection, aerosol input, and reductive dissolution of particulate iron.

[1] We calculate net community production (NCP) during summer 2005–2006 and spring 2006 in the Ross Sea using multiple approaches to determine the magnitude and consistency of rates. Water column carbon and nutrient inventories and surface ocean O2/Ar data are compared to satellite-derived primary productivity (PP) estimates and 14C uptake experiments. In spring, NCP was related to stratification proximal to upper ocean fronts. In summer, the most intense C drawdown was in shallow mixed layers affected by ice melt; depth-integrated C drawdown, however, increased with mixing depth. ΔO2/Ar-based methods, relying on gas exchange reconstructions, underestimate NCP due to seasonal variations in surface ΔO2/Ar and NCP rates. Mixed layer ΔO2/Ar requires approximately 60 days to reach steady state, starting from early spring. Additionally, cold temperatures prolong the sensitivity of gas exchange reconstructions to past NCP variability. Complex vertical structure, in addition to the seasonal cycle, affects interpretations of surface-based observations, including those made from satellites. During both spring and summer, substantial fractions of NCP were below the mixed layer. Satellite-derived estimates tended to overestimate PP relative to 14C-based estimates, most severely in locations of stronger upper water column stratification. Biases notwithstanding, NCP-PP comparisons indicated that community respiration was of similar magnitude to NCP. We observed that a substantial portion of NCP remained as suspended particulate matter in the upper water column, demonstrating a lag between production and export. Resolving the dynamic physical processes that structure variance in NCP and its fate will enhance the understanding of the carbon cycling in highly productive Antarctic environments.

We investigated biological Fe recycling in plankton communities from two contrasting marine ecosystems, the equatorial Pacific and Monterey Bay, California. Our experiments involved addition of cultured cyanobacteria and diatoms labeled with Fe radiotracer to natural plankton communities. Transfer of label into the natural community was followed by size fractionation and microautoradiography, and intracellular Fe was determined with titanium wash techniques. We documented the transfer of labeled Fe from added cyanobacteria to indigenous large cells in both environments and from large diatoms to indigenous small cells in the equatorial Pacific. Microautoradiography and Ti washing verified that transfer occurred from and into intracellular fractions in Monterey Bay experiments, although substantial amounts of transferred Fe were also found to be surface-adsorbed or associated with detritus. We argue that, as is the case for N, recycling of cellular Fe to support regenerated production could be an important component of marine ecosystem dynamics, especially in areas low in Fe.

A 6-d nutrient enrichment experiment was performed in the tropical North Pacific Ocean at 9”N, 147”W with ultraclean techniques. Changes in phytoplankton biomass, C and N assimilation rates, growth rates, and species composition were monitored with HPLC pigment analyses and flow cytometry techniques, as well as 14C fixation into particulate C, pigments, and protein. Prochlorophyte specific growth rates (from divinyl Chl a labeling) increased from an initial value of 0.15 d -I to 0.96 d-l following macronutrient addition (N, P, and Si). Diatoms, however, were unable to grow without added Fe. Diatom populations were severely colimited by Fe and macronutrients but achieved a specific growth rate of 2.5 d -’ following Fe and macronutrient additions. Results implied that grazing rates (g) on prochlorophytes were stimulated in approximate balance with prochlorophyte growth (p) after 6 d (g : p = O.SS), but that grazing processes were not as efficient (g: p = 0.40) at controlling the diatom standing stock. Our results suggest that grazing processes may be the most important factor regulating procaryotic biomass, but Fc limitation is the proximate control of diatom biomass and hence may limit the utilization of macronutrients in the equatorial Pacific Ocean.

Primary production was measured on four cruises to the subarctic Pacific Ocean as an integral component of the SUPER Project (SUbarctic Pacific Ecosystem Research). Results from 26 in situ experiments and 9 simulated in situ experiments yielded production rates that were significantly higher than measured during the earlier Canadian Weather Station program. The new estimate of annual primary production is ca 170g C m−2y−1, over three times greater than previously thought. Maximum production rates of over 1g C m−2d−1 also exceeded recent measurements made with ultraclean sampling technique. Photosynthesis versus irradiance experiments yielded average light-saturated, chlorophyll-specific assimilation rates of ca. 60mgC mgChl−1d−1, which, when combined with local estimates of algal C/Chl, suggested that the specific growth rate of phytoplankton exceeded one doubling per day under optimum conditions of irradiance. Although no spring phytoplankton blooms have ever been observed in the offshore subarctic Pacific, the primary production rates in this region are among the highest reported in any open-ocean environment; production per unit biomass does not seem limited to any extent. Removal processes, such as grazing and sinking, must necessarily play a major role in controlling the standing crop of phytoplankton in the subarctic Pacific.

Phytoplankton assemblages of the Ross Sea are generally dominated by two functional groups: diatoms and haptophytes ( Phaeocystis antarctica ). Within this “normal” pattern of dominance, there is a substantial amount of temporal (over months, seasons and years) and spatial variability. Such variability has a significant impact on several biogeochemical cycles, such as the carbon and sulfur cycles, at the regional and global scales. We compiled all available accessory pigment data for the southern Ross Sea as a means to quantify the prevalence and dominance of each group, and generated a seasonal “climatology” of assemblage composition. The climatological pattern of phytoplankton pigments shows that haptophytes normally grow and accumulate early in the season, and largely in the southern Ross Sea polynya. Diatoms reach a biomass maximum later, and reach most extensive concentrations closer to the coast of Victoria Land. While the pattern of spring growth of P. antarctica followed by an increase in diatom abundance is found frequently, deviations from that pattern were observed. Two periods – November, 2006 and January, 2004 – illustrated that variations of up to one order of magnitude can occur relative to the climatology. These deviations may provide insights into the dominant control mechanisms of the two functional groups.

The late stage of the North East Atlantic (NEA) spring bloom was investigated during June 2005 along a transect section from 45 to 66° N between 15 and 20° W in order to characterize the contribution of siliceous and calcareous phytoplankton groups and describe their distribution in relation to environmental factors. We measured several biogeochemical parameters such as nutrients, surface trace metals, algal pigments, biogenic silica (BSi), particulate inorganic carbon (PIC) or calcium carbonate, particulate organic carbon, nitrogen and phosphorus (POC, PON and POP, respectively), as well as transparent exopolymer particles (TEP). Results were compared with other studies undertaken in this area since the JGOFS NABE program. Characteristics of the spring bloom generally agreed well with the accepted scenario for the development of the autotrophic community. The NEA seasonal diatom bloom was in the late stages when we sampled the area and diatoms were constrained to the northern part of our transect, over the Icelandic Basin (IB) and Icelandic Shelf (IS). Coccolithophores dominated the phytoplankton community, with a large distribution over the Rockall-Hatton Plateau (RHP) and IB. The Porcupine Abyssal Plain (PAP) region at the southern end of our transect was the region with the lowest biomass, as demonstrated by very low chl-a concentrations and a community dominated by picophytoplankton. Early depletion of dissolved silicic acid (DSi) and increased stratification of the surface layer most likely triggered the end of the diatom bloom, leading to coccolithophore dominance. The chronic Si deficiency observed in the NEA could be linked to moderate Fe limitation, which increases the efficiency of the Si pump. TEP closely mirrored the distribution of both biogenic silica at depth and prymnesiophytes in the surface layer suggesting the sedimentation of the diatom bloom in the form of aggregates, but the relative contribution of diatoms and coccolithophores to carbon export in this area still needs to be resolved.

International audience; The CLAW hypothesis argues that a negative feedback mechanism involving phytoplankton-derived dimethylsulfoniopropionate (DMSP) could mitigate increasing sea surface temperatures that result from global warming. DMSP is converted to the climatically active dimethylsulfide (DMS), which is transferred to the atmosphere and photochemically oxidized to sulfate aerosols, leading to increases in planetary albedo and cooling of the Earth's atmosphere. A shipboard incubation experiment was conducted to investigate the effects of increased temperature and pCO2 on the algal community structure of the North Atlantic spring bloom and their subsequent impact on particulate and dissolved DMSP concentrations (DMSPp and DMSPd). Under 'greenhouse' conditions (elevated pCO2; 690 ppm) and elevated temperature (ambient + 4°C), coccolithophorid and pelagophyte abundances were significantly higher than under control conditions (390 ppm CO2 and ambient temperature). This shift in phytoplankton community structure also resulted in an increase in DMSPp concentrations and DMSPp:chl a ratios. There were also increases in DMSP-lyase activity and biomass-normalized DMSP-lyase activity under 'greenhouse' conditions. Concentrations of DMSPd decreased in the 'greenhouse' treatment relative to the control. This decline is thought to be partly due to changes in the microzooplankton community structure and decreased grazing pressure under 'greenhouse' conditions. The increases in DMSPp in the high temperature and greenhouse treatments support the CLAW hypothesis; the declines in DMSPd do not.

Concentrations of phytoplankton and NO{sub 3} are consistently low and high in surface waters of the oceanic eastern and central equatorial Pacific, and phytoplankton populations are dominated by small solitary phytoplankton. Growth rates of natural phytoplankton populations, needed to assess the relative importance of many of the processes considered in the equatorial Pacific, were estimated by several methods. The growth rates of natural phytoplankton populations were found to be {approximately}0.7 d{sup {minus}1} or 1 biomass doubling d{sup {minus}1} and were similar for all methods. To keep this system in its observed balance requires that loss rates approximate observed growth rates. Grazing rates, measured with a dilution grazing experiment, were high, accounting for a large fraction of the daily production. Additions of various forms of Fe to 5-7-d incubations utilizing ultraclean techniques resulted in significant shifts in autotrophic and heterotrophic assemblages between initial samples, controls, and Fe enrichments, which were presumably due to Fe, grazing by both protistan and metazoan components, and incubation artifacts. Estimated growth rates of small pennate diatoms showed increases in Fe enrichments with respect to controls. The growth rates of the pennate diatoms were similar to those estimated for the larger size fraction of the natural populations.

During the ADIOS I (Asian Dust Input to the Oceanic System) expedition to 26°N, 155°W in the North Pacific Central Gyre (NPCG) atmospheric-oceanic disturbances caused significant changes in phytoplankton community dynamics. A low pressure disturbance and several major dust deposition events resulted in a 37 and 25% increase in autotrophic carbon and nitrogen assimilation rates, respectively, relative to the pre-storm rates. The integrated submicron autotrophic N-assimilation rate increased by 72%. This submicron autotrophic community was responsible for 63 ± 7% of total autotrophic N-assimilation. New production increased by up to a factor of 4 as a result of the disturbances. The areal Chl a concentration doubled with the most significant increase observed near the base of the photic zone. Chemotaxonomic identification by HPLC pigment analyses indicated that the characteristic pigment concentrations of all major phytoplankton classes (except prokaryotic algae) increased as a result of the disturbances. Water column stability estimates and NO 3 − gradient measurements indicated that turbulent vertical transport of NO 3 − across the pycnocline could not explain the observed increases in photosynthetic parameters. Near surface NO 3 − concentrations increased following a dust deposition event. In addition, a positive temporal correlation was observed between the atmospheric Al concentration and the near-surface Chl a concentration. The data suggested that atmospheric deposition of NO 3 − and Fe stimulated autotrophic growth. Atmospheric deposition of NO 3 − and Fe may significantly enhance new production rates in the NPCG, especially during episodic dust events.

As part of the Asian Dust Inputs to the Ocean System (ADIOS) project, atmospheric dust fluxes and primary productivity were monitored during the dusty season (spring) of 1986 at 26°N, 155°W, in the North Pacific Ocean. The arrival of major pulses of dust from Asia was followed by major increases in primary production. Extensive chemical analyses of the atmospheric particles showed that they were iron-rich (10-15%) and, further, that if only a small proportion (e.g. 10%) of this iron dissolved in the euphotic zone, it would be sufficient to support the increases in carbon production at this location. The systematic increases in production noted with increasing depth and time may result from a continual release of iron from the settling particles in the euphotic zone. At all depths, systematic decreases in production followed the initial surge in production, indicating that the phytoplankton may have evolved from being iron-limited to being nitrogen-limited. Comparison of particle concentrations calculated by a particle settling model with primary productivity profiles indicated that mineral particles with settling velocities equivalent to those of 14 to 18-μm-diameter spherical quartz particles were the most likely source for the iron stimulating the increases in primary production.

Environmental context Cobalamin, or vitamin B12, is receiving increased attention as a critical trace nutrient in the growth and metabolic processes of oceanic phytoplankton and bacterial communities. We present evidence that indicates B12 has a more significant role in the biogeochemical cycling of the climatically important compounds dimethylsulfide and dimethylsulfoniopropionate than previously understood. Several possible mechanisms are examined that link cellular-level processes involving B12 to global-scale biogeochemical processes involving the oceanic cycling of dimethylsulfoniopropionate and dimethylsulfide. Abstract Evidence is presented showing that dissolved dimethylsulfoniopropionate (DMSPd) and dimethylsulfide (DMS) concentrations are influenced by the availability of vitamin B12 in two oceanographically distinct regions with different DMS production capacities, the central equatorial Pacific Ocean and the Ross Sea, Antarctica. In both locations, addition of B12 to incubation experiments resulted in decreases in DMS and, in some cases, DMSPd concentrations relative to unamended controls. In no case did increasing iron availability significantly (α=0.1) alter DMS concentrations relative to controls. The relative decreases in DMS between B12 addition and control experiments were significant (α=0.1) in five of seven experiments conducted at ambient iron levels. Overall, DMS concentrations were on average 33.4% (±15.1%; 1 standard deviation) lower, relative to unamended controls, by the end of incubation experiments when B12 was added. Declines in DMSPd were observed in three of five experiments. Similar trends were observed when B12 was added to iron-supplemented bottle incubation experiments (30.4±10.4% lower final DMS concentrations in +B12Fe treatments relative to +Fe treatments). Several possible molecular-level explanations exist for this link between B12 and DMS production, including potential B12 dependence of methyltransferase enzymes involved in both DMS and DMSP degradation. Although the enzymology of these reactions remains unclear, the relationships described here provide evidence for plausible mechanisms behind the microbial modulation of oceanic DMS.

Environmental context Dimethylsulfoniopropionate (DMSP), a small sulfur compound biosynthesised by algae, plays an important role in global climate, particularly in polar regions. We investigated salinity effects on DMSP levels, and provide the first experimental measurements of DMSP and associated physiological changes in a polar diatom across to a range of gradual salinity shifts representative of sea-ice conditions. Quantitative estimates of DMSP in polar diatoms following salinity changes will facilitate new mathematical models to predict seasonal responses and reactions to climate change. Abstract Although extreme environmental gradients within sea-ice have been proposed to stimulate dimethylsulfoniopropionate (DMSP) accumulation in diatoms, a taxa whose temperate counterparts show relatively low concentrations, this has yet to be experimentally validated across a range of salinities representative of sea-ice conditions. The present study examined changes in DMSP concentrations in the widespread polar diatom Fragilariopsis cylindrus in response to gradual salinity shifts representative of those encountered during sea-ice formation and melt. DMSP concentrations were elevated up to 127% in 70-salinity cultures. Low-salinity shifts decreased intracellular DMSP concentrations in a gradient-dependent manner that suggests DMSP recycling rather than release under milder hyposalinity shifts. Permeable membranes were detected in ~45% of 10-salinity cells; therefore, loss of membrane integrity may only partially explain DMSP release in the lowest-salinity group. Growth rates, photosynthetic efficiency of photosystem II and reactive oxygen species detection indicated only partial impairment by salinity stress in this organism. Thus, experimental evidence supports the role of DMSP as a compatible solute in the acclimation of a sea-ice diatom across large salinity gradients and measurements of associated physiological changes will improve interpretation of environmental measurements.

Primary production rates and concentrations of photosynthetic pigments were measured on 5 days during March and April 1987, at 26°N, 155°W in the North Pacific subtropical gyre. The primary production measurements were carried out using on-deck incubators with blue and blue-violet filters which simulated both the intensity and spectral characteristics of submarine light. Dawn-to-dusk production rates averaged 777±219 mg C m−2. The quantum requirements implied by photosynthetic rates measured near the base of the euphotic zone approached the theoretical minimum of 8 Ein mol−1C if the chlorophyll a-specific absorption coefficient ( k c ) was assumed to equal 16 m2 g−1 Chl a. Both the absorption characteristics of extracted pigments and of particulate material collected on glass fiber filters indicated that k c was constant and equal to 16.0±1.6 m2 g−1 Chl a over the depth of the euphotic zone if submarine light were assumed to have the same spectral characteristics as surface light. When the spectral characteristics of submarine light were properly modeled, k c was found to increase by about a factor of three between the surface and approximately the 14% light level and to equal 44±7 m2 g−1 Chl a throughout the lower 75% of the euphotic zone. The dramatic difference in the ability of phytoplankton to absorb equal quantum fluxes of white and blue light implies that areal primary production rates can be underestimated by about a factor of two in the open ocean if incubations are conducted using surface light attenuated with neutral density filters.

International audience; Global climate change is predicted to have large effects on the ocean that could cause shifts in current algal community structure, major nutrient cycles, and carbon export. The Bering Sea is already experiencing changes in sea surface temperature (SST), unprecedented algal blooms, and alterations to trophic level dynamics. We incubated phytoplankton communities from 2 Bering Sea regimes under conditions of elevated SST and/or partial pressure of carbon dioxide (pCO2) similar to predicted values for 2100. In our 'greenhouse ocean' simulations, maximum biomass-normalized photosynthetic rates increased 2.6 to 3.5 times and community composition shifted away from diatoms and towards nanophytoplankton. These changes were driven largely by elevated temperature, with secondary effects from increased pCO2. If these results are indicative of future climate responses, community shifts towards nanophytoplankton dominance could reduce the ability of the Bering Sea to maintain the productive diatom-based food webs that currently support one of the world's most productive fisheries.

behaved as a micronutrient with correlations with major nutrients (nitrate, phosphate; r 2 = 0.90, 0.96) until depleted to � 50 pM of strongly complexed cobalt. Co:P utilization ratios were an order of magnitude higher than in the North Pacific, comparable to utilization rates of zinc in other oceanic regions. Cobalt speciation measurements showed that available cobalt decreased over 4 orders of magnitude in this region, with shifts in phytoplankton assemblages occurring at transitions between labile and nonlabile cobalt. Only small changes in total dissolved nickel were observed, and nickel was present in a labile chemical form throughout the region. In the Peru upwelling region, cobalt uptake was highest at the surface and decreased with depth, suggesting phytoplankton uptake was a more important removal mechanism than co-oxidation with microbial manganese oxidation. These findings show the importance of cobalt as a micronutrient and that cobalt scarcity and speciation may be important in influencing phytoplankton species composition in this economically important environment. INDEX TERMS: 1030 Geochemistry: Geochemical cycles (0330); 1050 Geochemistry: Marine geochemistry (4835, 4850); 1065 Geochemistry: Trace elements (3670); 4279 Oceanography: General: Upwelling and convergences

Biochemistry of Pigments in Algae and Bacteria Methods for Identification and Quantification of Pigments Ecological Distributions of Algal and Bacterial Pigments Pigments and Taxonomy CHEMTAX Analysis of Phytoplankton Community Composition Keywords: algae, marine; marine environment; photosynthetic pigments