193 results on '"Gerdts G"'
Search Results
52. Pseudoalteromonas spp. phages, a significant group of marine bacteriophages in the North Sea
- Author
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Wichels, A, primary, Gerdts, G, additional, and Schütt, C, additional
- Published
- 2002
- Full Text
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53. Comparison of molecular species identification for North Sea calanoid copepods ( Crustacea) using proteome fingerprints and DNA sequences.
- Author
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Laakmann, S., Gerdts, G., Erler, R., Knebelsberger, T., Martínez Arbizu, P., and Raupach, M.J.
- Subjects
- *
CRUSTACEA , *NUCLEOTIDE sequence , *PROTEOMICS , *CALANOIDA , *IONIZATION (Atomic physics) - Abstract
Calanoid copepods play an important role in the pelagic ecosystem making them subject to various taxonomic and ecological studies, as well as indicators for detecting changes in the marine habitat. For all these investigations, valid identification, mainly of sibling and cryptic species as well as early life history stages, represents a central issue. In this study, we compare species identification methods for pelagic calanoid copepod species from the North Sea and adjacent regions in a total of 333 specimens. Morphologically identified specimens were analysed on the basis of nucleotide sequences (i.e. partial mitochondrial cytochrome c oxidase subunit I ( COI) and complete 18S r DNA) and on proteome fingerprints using the technology of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry ( MALDI- TOF MS). On all three molecular approaches, all specimens were classified to species level indicated by low intraspecific and high interspecific variability. Sequence divergences in both markers revealed a second Pseudocalanus species for the southern North Sea identified as Pseudocalanus moultoni by COI sequence comparisons to Gen Bank. Proteome fingerprints were valid for species clusters irrespective of high intraspecific variability, including significant differences between early developmental stages and adults. There was no effect of sampling region or time; thus, trophic effect, when analysing the whole organisms, was observed in species-specific protein mass spectra, underlining the power of this tool in the application on metazoan species identification. Because of less sample preparation steps, we recommend proteomic fingerprinting using the MALDI- TOF MS as an alternative or supplementary approach for rapid, cost-effective species identification. [ABSTRACT FROM AUTHOR]
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- 2013
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54. Effect of elevated CO2 on the dynamics of particle-attached and free-living bacterioplankton communities in an Arctic fjord.
- Author
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Sperling, M., Piontek, J., Gerdts, G., Wichels, A., Schunck, H., Roy, A.-S., La Roche, J., Gilbert, J., Nissimov, J. I., Bittner, L., Romac, S., Riebesell, U., and Engel, A.
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ATMOSPHERIC carbon dioxide ,BACTERIOPLANKTON ,FJORD ecology ,OCEAN acidification ,BACTERIAL diversity ,CARBON cycle - Abstract
In the frame of the European Project on Ocean Acidification (EPOCA), the response of an Arctic pelagic community (<3mm) to a gradient of seawater pCO
2 was investigated. For this purpose 9 large-scale in situ mesocosms were deployed in Kongsfjorden, Svalbard (78°56.2' N, 11°53.6' E), in 2010. The present study investigates effects on the communities of particle-attached (PA; >3 µm) and free-living (FL; <3 µm>0.2 µm) bacteria by Automated Ribosomal Intergenic Spacer Analysis (ARISA) in 6 of the mesocosms, ranging from 185 to 1050 µatm initial pCO2 , and the surrounding fjord. ARISA was able to resolve, on average, 27 bacterial band classes per sample and allowed for a detailed investigation of the explicit richness and diversity. Both, the PA and the FL bacterioplankton community exhibited a strong temporal development, which was driven mainly by temperature and phytoplankton development. In response to the breakdown of a picophytoplankton bloom, numbers of ARISA band classes in the PA community were reduced at low and medium CO2 (~185-685 µatm) by about 25%, while they were more or less stable at high CO2 (~820-1050 µatm). We hypothesise that enhanced viral lysis and enhanced availability of organic substrates at high CO2 resulted in a more diverse PA bacterial community in the post-bloom phase. Despite lower cell numbers and extracellular enzyme activities in the post-bloom phase, bacterial protein production was enhanced in high CO2 mesocosms, suggesting a positive effect of community richness on this function and on carbon cycling by bacteria. [ABSTRACT FROM AUTHOR]- Published
- 2013
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55. Effect of elevated CO2 on the dynamics of particle attached and free living bacterioplankton communities in an Arctic fjord.
- Author
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Sperling, M., Piontek, J., Gerdts, G., Wichels, A., Schunck, H., Roy, A.-S., Roche, J. La, Gilbert, J., Bittner, L., Romac, S., Riebesell, U., and Engel, A.
- Subjects
BACTERIOPLANKTON ,BIOTIC communities ,FJORD ecology ,OCEAN acidification ,CARBON cycle - Abstract
The increase in atmospheric carbon dioxide (CO
2 ) results in acidification of the oceans, expected to lead to the fastest drop in ocean pH in the last 300 million years, if anthropogenic emissions are continued at present rate. Due to higher solubility of gases in cold waters and increased exposure to the atmosphere by decreasing ice cover, the Arctic Ocean will be among the areas most strongly affected by ocean acidification. Yet, the response of the plankton community of high latitudes to ocean acidification has not been studied so far. This work is part of the Arctic campaign of the European Project on Ocean Acidification (EPOCA) in 2010, employing 9 in situ mesocosms of about 45 000 l each to simulate ocean acidification in Kongsfjorden, Svalbard (78° 56.20 N 11 ° 53.60 E). In the present study, we investigated effects of elevated CO2 on the composition and richness of particle attached (PA; >3 µm) and free living (FL; < 3 µm > 0.2 µm) bacterial communities by Automated Ribosomal Intergenic Spacer Analysis (ARISA) in 6 of the mesocosms and the surrounding fjord, ranging from 185 to 1050 initial µatm pCO2 . ARISA was able to resolve about 20-30 bacterial band-classes per sample and allowed for a detailed investigation of the explicit richness. Both, the PA and the FL bacterioplankton community exhibited a strong temporal development, which was driven mainly by temperature and phytoplankton development. In response to the breakdown of a picophytoplankton bloom (phase 3 of the experiment), number of ARISA-band classes in the PA-community were reduced at low and medium CO2 (∼180-600 µatm) by about 25%, while it was more or less stable at high CO2 (∼650-800 µatm). We hypothesise that enhanced viral lysis and enhanced availability of organic substrates at high CO2 resulted in a more diverse PA-bacterial community in the post-bloom phase. Despite lower cell numbers and extracellular enzyme activities in the post-bloom phase, bacterial protein production was enhanced in high CO2 -treatments, suggesting a positive effect of community richness on this function and on carbon cycling by bacteria. [ABSTRACT FROM AUTHOR]- Published
- 2012
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56. The Ocean Sampling Day Consortium
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Oleksandra Bobrova, Petra ten Hoopen, Rodrigo Costa, Rania Siam, Rehab Z. Abdallah, Jorge A. Herrera Silveira, Catarina Magalhães, Nedime Serakinci, Marie E. DeLorenzo, Riccardo Rosselli, Paul Malthouse, Lise Øvreås, Eyjólfur Reynisson, Susan Gebbels, Francesca Malfatti, Frank Oliver Glöckner, Federico M. Lauro, Hans Erik Karlsen, David Wallom, Christian Jeanthon, Mark J. Costello, Fergal O'Gara, Nadezhda Todorova, Ana C. Costa, Monia El Bour, Paul D. van Ruth, Ivaylo Kostadinov, Martin Ostrowski, Jed A. Fuhrman, Viggo Marteinsson, Thierry Cariou, Hiroyuki Ogata, Maria Luiza Pedrotti, Emilie Villar, Federico Baltar, Sandi Orlić, Valentina Turk, Katja Lehmann, Dawn Field, Renzo Kottmann, Florence Jude-Lemeilleur, Daniel Vaulot, Alessandro Vezzi, Neil M Davies, Mahrous M. Kandil, Véronique Berteaux-Lecellier, Christopher D. Sinigalliano, Timothy W. Davis, Peter N. Golyshin, Stéphane L'Haridon, Jonathan A. Martinez, Sandra Ramos, Pascal Conan, Ma. Leopoldina Aguirre-Macedo, Antonio Fernandez-Guerra, Soumya Essayeh, Clara Loureiro, Edvardsen Bente, Noureddine Boukhatem, Rachelle M. Jensen, Sophie Pitois, Bouchra Chaouni, Kate Munnik, Anke Kremp, Stephane Pesant, Roberto Danovaro, Cecilia Alonso, Said Barrijal, Jodie van de Kamp, Michail M. Yakimov, Nicole J. Poulton, Zackary I. Johnson, Adriana Zingone, Bernardo Duarte, Ilkay Salihoglu, Paraskevi N. Polymenakou, Jack A. Gilbert, Melody S. Clark, Ian Salter, Hassan Ghazal, Julie LaRoche, J. Mortelmans, Ranjith Edirisinghe, Grazia Marina Quero, Dion Matthew Frederick Frampton, Isabel Caçador, Georgios Tsiamis, Declan C. Schroeder, Jamie Hinks, Ana Martins, Noga Stambler, Rachel Collin, João Canning-Clode, Tinkara Tinta, Mesude Bicak, Scott Jones, Valentina Amaral, Matthias S. Ullrich, Gunnar Gerdts, Klaas Deneudt, Michael Steinke, Mohamed Bennani, Rafael Santana, Fabio De Pascale, Jennifer Tolman, Juan Iriberri, Levente Bodrossy, Abderrahim Bouali, Antonella Penna, Bruno Cataletto, Josep M. Gasol, Florencia Biancalana, Maribeth L. Gidley, Stephen A. Jackson, Mahmut Cerkez Ergoren, Carolin R. Löscher, Antje Wichels, Ventzislav Karamfilov, R. Eric Collins, Sara Ettamimi, Riccardo Schiavon, Mohammed Timinouni, Christina Bienhold, Julia Schnetzer, Marc E. Frischer, Wayne J. Fuller, Simon Claus, Ibon Cancio, Guy Cochrane, Patrick Martin, Gian Marco Luna, Snejana Moncheva, Linda A. Amaral-Zettler, Eva C. Sonnenschein, Paul Anders Fronth Nyhus, Shiao Y. Wang, Antonina Dos Santos, Eyal Rahav, Eileen Bresnan, Anna Kopf, Barker Katherine, Michèle Barbier, Naiara Rodríguez-Ezpeleta, Kemal Can Bizsel, Tim Ingleton, Patricia Wecker, Julia A. Busch, Kelly D. Goodwin, El Houcine Zaid, Rajaa Chahboune, Takashi Yoshida, Fatima El Otmani, Marianna Mea, Nina Dzhembekova, Anne-Lise Ducluzeau, Christopher P. Meyer, Georgios Kotoulas, Max Planck Institute for Marine Microbiology, Max-Planck-Gesellschaft, Jacobs University [Bremen], University of Oxford, Centre for Ecology & Hydrology, Oxfordshire UK, Adaptation et diversité en milieu marin (AD2M), Station biologique de Roscoff [Roscoff] (SBR), Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS), Israel Oceanographic and Limnological Research (IOLR), Alfred-Wegener-Institut, Helmholtz-Zentrum für Polar- und Meeresforschung (AWI), Hellenic Centre for Marine Research (HCMR), American University in Cairo, Danmarks Tekniske Universitet = Technical University of Denmark (DTU), Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS), University College Cork (UCC), Curtin University [Perth], Planning and Transport Research Centre (PATREC), Institut Ruder Boskovic, Institut Ruđer Bošković (IRB), University of Essex, Carl Von Ossietzky Universität Oldenburg = Carl von Ossietzky University of Oldenburg (OFFIS), Universidade de Lisboa = University of Lisbon (ULISBOA), Smithonian Environmental Research Center, Research Center, Odessa National I.I.Mechnikov University, Matis Ltd, Universidade dos Açores, Istituto di Science Marine (ISMAR ), National Research Council of Italy | Consiglio Nazionale delle Ricerche (CNR), Helmholtz Centre for Ocean Research [Kiel] (GEOMAR), Finnish Environment Institute (SYKE), National Oceanic and Atmospheric Administration (NOAA), University of Bergen (UiB), Dalhousie University [Halifax], Università di Urbino, Skidaway Institute of Oceanography, Smithsonian Institution, Interdisciplinary Centre of Marine and Environmental Research [Matosinhos, Portugal] (CIIMAR), Universidade do Porto = University of Porto, Environnements et Paléoenvironnements OCéaniques (EPOC), Observatoire aquitain des sciences de l'univers (OASU), Université Sciences et Technologies - Bordeaux 1 (UB)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-Université Sciences et Technologies - Bordeaux 1 (UB)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-École Pratique des Hautes Études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Centre National de la Recherche Scientifique (CNRS), Centro de Investigacion y de Estudios Avanzados del Instituto Politécnico Nacional (CINVESTAV), Mississippi State University [Mississippi], Bigelow Laboratory for Ocean Sciences, Smithsonian Marine Station, Smithsonian Tropical Research Institute, University of Southern California (USC), Laboratoire d'Océanographie Microbienne (LOMIC), Observatoire océanologique de Banyuls (OOB), Universidad de la República [Montevideo] (UDELAR), Bar-Ilan University [Israël], The Interuniversity Institute for marine Science in Eilat, IAMC-CNR, Istituto per l'Ambiente Marino Costiero &ndash, University of Otago [Dunedin, Nouvelle-Zélande], Commonwealth Scientific and Industrial Research Organisation [Canberra] (CSIRO), Macquarie University, South Australian Research and Development Institute (SARDI), South Australian Research and Development Institute, Flanders Marine Institute, VLIZ, Centre for Environment, Fisheries and Aquaculture Science [Weymouth] (CEFAS), University of Algarve [Portugal], Marine Biological Association of the UK, Department of Chemistry, Alexandria University [Alexandrie], Argentine Institute of Oceanography, Laboratoire d'océanographie de Villefranche (LOV), Observatoire océanologique de Villefranche-sur-mer (OOVM), Université Pierre et Marie Curie - Paris 6 (UPMC)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS), Kyoto University, University of Tasmania [Hobart, Australia] (UTAS), Waters, wetlands & coasts Sydney, Lwande technologies Cape Town, AZTI (AZTI), AZTI, Centre de recherches insulaires et observatoire de l'environnement (CRIOBE), Université de Perpignan Via Domitia (UPVD)-École Pratique des Hautes Études (EPHE), University of the Basque Country/Euskal Herriko Unibertsitatea (UPV/EHU), Université Mohammed Premier [Oujda], Université Mohammed V de Rabat [Agdal] (UM5), Université Sidi Mohamed Ben Abdellah (USMBA), Université Abdelmalek Essaâdi (UAE), Institut Pasteur du Maroc, Réseau International des Instituts Pasteur (RIIP), Faculty of Sciences, Rabat, Morocco., Bulgarian Academy of Sciences (BAS), European Bioinformatics Institute [Hinxton] (EMBL-EBI), EMBL Heidelberg, Université de Brest (UBO), Dokuz Eylül Üniversitesi = Dokuz Eylül University [Izmir] (DEÜ), Università degli Studi di Padova = University of Padua (Unipd), Singapore centre for environmental life sciences engineering, Nanyang Technological University [Singapour], Indigo V Expeditions, Newcastle University [Newcastle], Instituto Português de Investigação do Mar e da Atmosfera (IPMA), Information génomique et structurale (IGS), Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS), Universität Bremen, Istituto Nazionale di Geofisica e di Oceanografia Sperimentale (OGS), Rajarata University of Sri-Lanka (RUSL), University of Southern Mississippi (USM), Mediterranean Science Commission, National institute of biology Fornace, Near East University, Marine Scotland Marine Laboratory, Kind of Blue Project ABS, University of Oslo (UiO), Marine biology research station, Bangor University, Institute of Marine Sciences / Institut de Ciències del Mar [Barcelona] (ICM), Consejo Superior de Investigaciones Científicas [Madrid] (CSIC), Fridtjof Nansen Institute of oceanology, Duke University [Durham], Miami University, Miami University [Ohio] (MU), Stazione Zoologica Anton Dohrn (SZN), Polytechnic University of Marche, University of Patras, British Antarctic Survey (BAS), Natural Environment Research Council (NERC), INSTIM, University of Alaska [Fairbanks] (UAF), University of Hawaii, University of Auckland [Auckland], Marine Biological Laboratory (MBL), University of Chicago, Brown University, Zhejiang University, Argonne National Laboratory [Lemont] (ANL), Department of Mathematics [Berkeley], University of California [Berkeley] (UC Berkeley), University of California (UC)-University of California (UC), Repositório da Universidade de Lisboa, Kopf, A, Bicak, M, Kottmann, R, Schnetzer, J, Kostadinov, I, Lehmann, K, Fernandez-Guerra, A, Jeanthon, C, Rahav, E, Ullrich, M, Wichels, A, Gerdts, G, Polymenakou, P, Kotoulas, G, Siam, R, Abdallah, Rz, Sonnenschein, Ec, Cariou, T, O'Gara, F, Jackson, S, Orlic, S, Steinke, M, Busch, J, Duarte, B, Cacador, I, Canning-Clode, J, Bobrova, O, Marteinsson, V, Reynisson, E, Loureiro, Cm, Luna, Gm, Quero, Gm, Loscher, Cr, Kremp, A, Delorenzo, Me, Ovreas, L, Tolman, J, Laroche, J, Penna, A, Frischer, M, Davis, T, Katherine, B, Meyer, Cp, Ramos, S, Magalhaes, C, Jude-Lemeilleur, F, Aguirre-Macedo, Ml, Wang, S, Poulton, N, Jones, S, Collin, R, Fuhrman, Ja, Conan, P, Alonso, C, Stambler, N, Goodwin, K, Yakimov, Mm, Baltar, F, Bodrossy, L, Van De Kamp, J, Frampton, Dmf, Ostrowski, M, Van Ruth, P, Malthouse, P, Claus, S, Deneudt, K, Mortelmans, J, Pitois, S, Wallom, D, Salter, I, Costa, R, Schroeder, Dc, Kandil, Mm, Amaral, V, Biancalana, F, Santana, R, Pedrotti, Ml, Yoshida, T, Ogata, H, Ingleton, T, Munnik, K, Rodriguez-Ezpeleta, N, Berteaux-Lecellier, V, Wecker, P, Cancio, I, Vaulot, D, Bienhold, C, Ghazal, H, Chaouni, B, Essayeh, S, Ettamimi, S, Zaid, E, Boukhatem, N, Bouali, A, Chahboune, R, Barrijal, S, Timinouni, M, El Otmani, F, Bennani, M, Mea, M, Todorova, N, Karamfilov, V, ten Hoopen, P, Cochrane, G, L'Haridon, S, Bizsel, Kc, Vezzi, A, Lauro, Fm, Martin, P, Jensen, Rm, Hinks, J, Gebbels, S, Rosselli, R, De Pascale, F, Schiavon, R, dos Santos, A, Villar, E, Pesant, S, Cataletto, B, Malfatti, F, Edirisinghe, R, Silveira, Jah, Barbier, M, Turk, V, Tinta, T, Fuller, Wj, Salihoglu, I, Serakinci, N, Ergoren, Mc, Bresnan, E, Iriberri, J, Nyhus, Paf, Bente, E, Karlsen, He, Golyshin, Pn, Gasol, Jm, Moncheva, S, Dzhembekova, N, Johnson, Z, Sinigalliano, Cd, Gidley, Ml, Zingone, A, Danovaro, R, Tsiamis, G, Clark, M, Costa, Ac, El Bour, M, Martins, Am, Collins, Re, Ducluzeau, Al, Martinez, J, Costello, Mj, Amaral-Zettler, La, Gilbert, Ja, Davies, N, Field, D, Glockner, Fo, European Commission, University of Oxford [Oxford], Israel Oceanographic and Limnological Research - IOLR (ISRAEL), Danmarks Tekniske Universitet (DTU), Carl Von Ossietzky Universität Oldenburg, Universidade de Lisboa (ULISBOA), Consiglio Nazionale delle Ricerche (CNR), Universidade do Porto, UMR 5805 Environnements et Paléoenvironnements Océaniques et Continentaux (EPOC), Université Sciences et Technologies - Bordeaux 1-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-Université Sciences et Technologies - Bordeaux 1-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-École pratique des hautes études (EPHE), Universidad de la República [Montevideo] (UCUR), Kyoto University [Kyoto], Université de Perpignan Via Domitia (UPVD)-École pratique des hautes études (EPHE), University of Mohammed V, Sidi Mohammed Ben Abdellah University, Universita degli Studi di Padova, Rajarata University of Sri-Lanka, University of Patras [Patras], University of California [Berkeley], and University of California-University of California
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0106 biological sciences ,Biodiversity ,Marine life ,01 natural sciences ,Bacteria ,Genomics ,Health Index ,Marine ,Metagenomics ,Micro B3 ,Microorganism ,OSD ,Ocean sampling day ,Standards ,11. Sustainability ,Data and Information ,Ocean Sampling Day ,biodiversity ,genomics ,health index ,bacteria ,microorganism ,metagenomics ,marine ,standards ,[SDU.OCEAN]Sciences of the Universe [physics]/Ocean, Atmosphere ,0303 health sciences ,Ecology ,Environmental resource management ,Geology ,Computer Science Applications ,Interdisciplinary Natural Sciences ,Microbial biodiversity ,[SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology ,Ocean sampling day, OSD, Biodiversity, Genomics, Health Index, Bacteria, Microorganism, Metagenomics,Marine, Micro B3, Standards ,Oceans and Seas ,Microorganisms ,Marine Biology ,Health Informatics ,[SDV.BID]Life Sciences [q-bio]/Biodiversity ,Biology ,Ecology and Environment ,Metagenomic ,03 medical and health sciences ,Health index ,Medisinske Fag: 700 [VDP] ,SDG 14 - Life Below Water ,14. Life underwater ,030304 developmental biology ,business.industry ,010604 marine biology & hydrobiology ,Ocean sampling ,13. Climate action ,Commentary ,Genomic ,Database Management Systems ,Global Ocean ,business - Abstract
Kopf, Anna ... et. al.-- 5 pages, 1 figure.-- This manuscript is NOAA-GLERL contribution number 1763, Ocean Sampling Day was initiated by the EU-funded Micro B3 (Marine Microbial Biodiversity, Bioinformatics, Biotechnology) project to obtain a snapshot of the marine microbial biodiversity and function of the world’s oceans. It is a simultaneous global mega-sequencing campaign aiming to generate the largest standardized microbial data set in a single day. This will be achievable only through the coordinated efforts of an Ocean Sampling Day Consortium, supportive partnerships and networks between sites. This commentary outlines the establishment, function and aims of the Consortium and describes our vision for a sustainable study of marine microbial communities and their embedded functional traits, This work was supported by the Micro B3 project, which is funded from the European Union’s Seventh Framework Programme (FP7; Joint Call OCEAN.2011‐2: Marine microbial diversity – new insights into marine ecosystems functioning and its biotechnological potential) under the grant agreement no 287589
- Published
- 2015
57. Microplastics and low tide warming: Metabolic disorders in intertidal Pacific oysters (Crassostrea gigas).
- Author
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Paul N, Tillmann A, Lannig G, Pogoda B, Lucassen M, Mackay-Roberts N, Gerdts G, and Bock C
- Subjects
- Animals, Gills drug effects, Gills metabolism, Tidal Waves, Environmental Monitoring, Metabolomics, Crassostrea drug effects, Microplastics toxicity, Water Pollutants, Chemical toxicity
- Abstract
Sessile intertidal organisms live in a harsh environment with challenging environmental conditions and increasing anthropogenic pressure such as microplastic (MP) pollution. This study focused on effects of environmentally relevant MP concentrations on the metabolism of intertidal Pacific oyster Crassostrea gigas, and its potential MP-induced vulnerability to warming during midday low tide. Oysters experienced a simulated semidiurnal tidal cycle based on their natural habitat, and were exposed to a mixture of polystyrene microbeads (4, 7.5 and 10 µm) at two environmentally relevant concentrations (0.025 µg L
-1 and 25 µg L-1 ) for 16 days, with tissue samplings after 3 and 12 days to address dose-dependent effects over time. On the last day of exposure, the remaining oysters were additionally exposed to low tide warming (3 °C h-1 ) to investigate possible MP-induced susceptibility to aerial warming. Metabolites of digestive gland and gill tissues were analysed by using untargeted1 H nuclear magnetic resonance (NMR) based metabolomics. For the digestive gland metabolite profiles were comparable to each other independent of MP concentration, exposure time, or warming. In contrast, gill metabolites were significantly affected by high MP exposure and warming irrespective of MP, initiating the same cellular stress response to counteract induced oxidative stress. The activated cascade of antioxidant defence mechanisms required energy on top of the general energy turnover to keep up homeostasis, which in turn may lead to subtle, and likely sub-lethal, effects within intertidal oyster populations. Present results underline the importance of examining the effects of environmentally relevant MP concentrations not only alone but in combination with other environmental stressors., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 The Authors. Published by Elsevier Inc. All rights reserved.)- Published
- 2024
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58. Diving into the Depths: Uncovering Microplastics in Norwegian Coastal Sediment Cores.
- Author
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Wu F, Zonneveld KAF, Wolschke H, von Elm R, Primpke S, Versteegh GJM, and Gerdts G
- Abstract
High concentrations of microplastics (MPs) have been documented in the deep-sea surface sediments of the Arctic Ocean. However, studies investigating their high-resolution vertical distribution in sediments from the European waters to the Arctic remain limited. This study examines MPs in five sediment cores from the Norwegian Coastal Current (NCC), encompassing the water-sediment interface and sediment layers up to 19 cm depth. Advanced analytical methods for MP identification down to 11 μm in size were combined with radiometric dating and lithology observations. MPs were present across all sediment cores, including layers predating the introduction of plastics, with concentrations exhibiting significant variation (54-12,491 MP kg
-1 ). The smallest size class (11 μm) predominated in most sediment layers (34-100%). A total of 18 different polymer types were identified across all sediment layers, with polymer diversity and depth correlations varying widely between stations. Our findings suggest that differences in seafloor topography and the impact of anthropogenic activities (e.g., fishing) lead to varying environmental conditions at the sampling sites, influencing the vertical distribution of MPs. This challenges the reliability of using environmental parameters to predict MP accumulation zones and questions the use of MPs in sediment cores as indicators of the Anthropocene.- Published
- 2024
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59. Spatial distribution of small microplastics in the Norwegian Coastal Current.
- Author
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Wu F, Reding L, Starkenburg M, Leistenschneider C, Primpke S, Vianello A, Zonneveld KAF, Huserbråten MBO, Versteegh GJM, and Gerdts G
- Abstract
High concentrations of microplastic (MP) particles have been reported in the Arctic Ocean. However, studies on the high-resolution lateral and vertical transport of MPs from the European waters to the Arctic are still scarce. Here, we provide information about the concentrations and compositions of MPs in surface, subsurface, and deeper waters (< 1 m, ∼ 4 m, and 17-1679 m) collected at 18 stations on six transects along the Norwegian Coastal Current (NCC) using an improved Neuston Catamaran, the COntinuos MicroPlastic Automatic Sampling System (COMPASS), and in situ pumps, respectively. FTIR microscopy and spectroscopy were applied to measure MP concentration, polymer composition, and size distribution. Results indicate that the concentrations of small microplastics (SMPs, <300 μm) varied considerably (0-1240 MP m
-3 ) within the water column, with significantly higher concentrations in the surface (189 MP m-3 ) and subsurface (38 MP m-3 ) waters compared to deeper waters (16 MP m-3 ). Furthermore, the average concentration of SMPs in surface water samples was four orders of magnitude higher than the abundance of large microplastics (LMPs, >300 μm), and overall, SMPs <50 μm account for >80 % of all detected MPs. However, no statistically significant geographical patterns were observed in SMP concentrations in surface/subsurface seawaters between the six sampling transects, suggesting a relatively homogeneous horizontal distribution of SMPs in the upper ocean within the NCC/Norwegian Atlantic Current (NwAC) interface. The Lagrangian particle dispersal simulation model further enabled us to assess the large-scale transport of MPs from the Northern European waters to the Arctic., Competing Interests: Declaration of competing interest The authors declare no competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 The Authors. Published by Elsevier B.V. All rights reserved.)- Published
- 2024
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60. Unveiling high concentrations of small microplastics (11-500 μm) in surface water samples from the southern Weddell Sea off Antarctica.
- Author
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Leistenschneider C, Wu F, Primpke S, Gerdts G, and Burkhardt-Holm P
- Abstract
Recent studies have highlighted the prevalence of microplastic (MP) pollution in the global marine environment and these pollutants have been found to contaminate even remote regions, including the Southern Ocean south of the polar front. Previous studies in this region have mostly focused on MPs larger than 300 μm, potentially underestimating the extent of MP pollution. This study is the first to investigate MPs in marine surface waters south of the polar front, with a focus on small MPs 500-11 μm in size. Seventeen surface water samples were collected in the southern Weddell Sea using an in-house-designed sampling system. The analysis of the entire sample using micro-Fourier transform infrared spectroscopy (μFTIR) with focal plane array (FPA) detection revealed the presence of MPs in all samples, with the vast majority of the MPs detected being smaller than 300 μm (98.3 %). The mean concentration reached 43.5 (± 83.8) MPs m
-3 , with a wide range from 0.5 to 267.2 MPs m-3 . The samples with the highest concentrations differed from the other samples in that they were collected north of the continental slope and the Antarctic Slope Current. Sea ice conditions possibly also influenced these varying concentrations. This study reports high concentrations of MPs compared to other studies in the region. It emphasizes the need to analyze small MPs, down to a size of 11 μm or even smaller, in the Antarctic Treaty Area to gain a more comprehensive understanding of MP pollution and its potential ecological impacts., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 The Authors. Published by Elsevier B.V. All rights reserved.)- Published
- 2024
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61. At second glance: The importance of strict quality control - A case study on microplastic in the Southern Ocean key species Antarctic krill, Euphausia superba.
- Author
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Primpke S, Meyer B, Falcou-Préfol M, Schütte W, and Gerdts G
- Subjects
- Animals, Microplastics, Plastics, Ecosystem, Antarctic Regions, Oceans and Seas, Euphausiacea
- Abstract
The stomach content of 60 krill specimens from the Southern Ocean were analyzed for the presence of microplastic (MP), by testing different sample volumes, extraction approaches, and applying hyperspectral imaging Fourier-transform infrared spectroscopy (μFTIR). Strict quality control was applied on the generated results. A high load of residual materials in pooled samples hampered the analysis and avoided a reliable determination of putative MP particles. Individual krill stomachs displayed reliable results, however, only after re-treating the samples with hydrogen peroxide. Before this treatment, lipid rich residues of krill resulted in false assignments of polymer categories and hence, false high MP particle numbers. Finally, MP was identified in 4 stomachs out of 60, with only one MP particle per stomach. Our study highlights the importance of strict quality control to verify results before coming to a final decision on MP contamination in the environment to aid the establishment of suitable internationally standardized protocols for sampling and analysis of MP in organisms including their habitats in Southern Ocean and worldwide., Competing Interests: Declaration of competing interest The authors have no competing interest to declare., (Copyright © 2024 The Authors. Published by Elsevier B.V. All rights reserved.)
- Published
- 2024
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62. Generation of macro- and microplastic databases by high-throughput FTIR analysis with microplate readers.
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Cowger W, Roscher L, Jebens H, Chamas A, Maurer BD, Gehrke L, Gerdts G, and Primpke S
- Abstract
FTIR spectral identification is today's gold standard analytical procedure for plastic pollution material characterization. High-throughput FTIR techniques have been advanced for small microplastics (10-500 µm) but less so for large microplastics (500-5 mm) and macroplastics (> 5 mm). These larger plastics are typically analyzed using ATR, which is highly manual and can sometimes destroy particles of interest. Furthermore, spectral libraries are often inadequate due to the limited variety of reference materials and spectral collection modes, resulting from expensive spectral data collection. We advance a new high-throughput technique to remedy these problems using FTIR microplate readers for measuring large particles (> 500 µm). We created a new reference database of over 6000 spectra for transmission, ATR, and reflection spectral collection modes with over 600 plastic, organic, and mineral reference materials relevant to plastic pollution research. We also streamline future analysis in microplate readers by creating a new particle holder for transmission measurements using off-the-shelf parts and fabricating a nonplastic 96-well microplate for storing particles. We determined that particles should be presented to microplate readers as thin as possible due to thick particles causing poor-quality spectra and identifications. We validated the new database using Open Specy and demonstrated that additional transmission and reflection spectra reference data were needed in spectral libraries., (© 2024. The Author(s).)
- Published
- 2024
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63. Journey to the deep: plastic pollution in the hadal of deep-sea trenches.
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Abel SM, Wu F, Primpke S, Gerdts G, and Brandt A
- Subjects
- Environmental Pollution analysis, Microplastics, Oceans and Seas, Plastics analysis, Water Pollutants, Chemical analysis
- Abstract
The global increase of plastic production, linked with an overall plastic misuse and waste mismanagement, leads to an inevitable increase of plastic debris that ends up in our oceans. One of the major sinks of this pollution is the deep-sea floor, which is hypothesized to accumulate in its deepest points, the hadal trenches. Little is known about the magnitude of pollution in these trenches, given the remoteness of these environments, numerous factors influencing the input and sinking behavior of plastic debris from shallower environments. This study represents to the best of our knowledge the largest survey of (macro)plastic debris sampled at hadal depths, down to 9600 m. Industrial packaging and material assignable to fishing activities were the most common debris items in the Kuril Kamchatka trench, most likely deriving from long-distance transport by the Kuroshio extension current (KE) or from regional marine traffic and fishing activities. The chemical analysis by (Attenuated Total Reflection Fourier transform infrared (ATR-FTIR) spectroscopy revealed that the main polymers detected were polyethylene (PE), polypropylene (PP) and nylon. Plastic waste is reaching the depths of the trench, although some of the items were only partially broken down. This finding suggests that complete breakdown into secondary microplastics (MP) may not always occur at the sea surface or though the water column. Due to increased brittleness, plastic debris may break apart upon reaching the hadal trench floor where plastic degrading factors were thought to be, coming off. The KKT's remote location and high sedimentation rates make it a potential site for high levels of plastic pollution, potentially making it one of the world's most heavily contaminated marine areas and an oceanic plastic deposition zone., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 Elsevier Ltd. All rights reserved.)
- Published
- 2023
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64. Occurrence and backtracking of microplastic mass loads including tire wear particles in northern Atlantic air.
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Goßmann I, Herzke D, Held A, Schulz J, Nikiforov V, Georgi C, Evangeliou N, Eckhardt S, Gerdts G, Wurl O, and Scholz-Böttcher BM
- Subjects
- Plastics chemistry, Environmental Monitoring, Polypropylenes, Microplastics, Water Pollutants, Chemical analysis
- Abstract
Few studies report the occurrence of microplastics (MP), including tire wear particles (TWP) in the marine atmosphere, and little data is available regarding their size or sources. Here we present active air sampling devices (low- and high-volume samplers) for the evaluation of composition and MP mass loads in the marine atmosphere. Air was sampled during a research cruise along the Norwegian coast up to Bear Island. Samples were analyzed with pyrolysis-gas chromatography-mass spectrometry, generating a mass-based data set for MP in the marine atmosphere. Here we show the ubiquity of MP, even in remote Arctic areas with concentrations up to 37.5 ng m
-3 . Cluster of polyethylene terephthalate (max. 1.5 ng m-3 ) were universally present. TWP (max. 35 ng m-3 ) and cluster of polystyrene, polypropylene, and polyurethane (max. 1.1 ng m-3 ) were also detected. Atmospheric transport and dispersion models, suggested the introduction of MP into the marine atmosphere equally from sea- and land-based emissions, transforming the ocean from a sink into a source for MP., (© 2023. The Author(s).)- Published
- 2023
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65. Comparison of two rapid automated analysis tools for large FTIR microplastic datasets.
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Moses SR, Roscher L, Primpke S, Hufnagl B, Löder MGJ, Gerdts G, and Laforsch C
- Abstract
One of the biggest issues in microplastic (MP, plastic items <5 mm) research is the lack of standardisation and harmonisation in all fields, reaching from sampling methodology to sample purification, analytical methods and data analysis. This hampers comparability as well as reproducibility among studies. Concerning chemical analysis of MPs, Fourier-transform infrared (FTIR) spectroscocopy is one of the most powerful tools. Here, focal plane array (FPA) based micro-FTIR (µFTIR) imaging allows for rapid measurement and identification without manual preselection of putative MP and therefore enables large sample throughputs with high spatial resolution. The resulting huge datasets necessitate automated algorithms for data analysis in a reasonable time frame. Although solutions are available, little is known about the comparability or the level of reliability of their output. For the first time, within our study, we compare two well-established and frequently applied data analysis algorithms in regard to results in abundance, polymer composition and size distributions of MP (11-500 µm) derived from selected environmental water samples: (a) the siMPle analysis tool (systematic identification of MicroPlastics in the environment) in combination with MPAPP (MicroPlastic Automated Particle/fibre analysis Pipeline) and (b) the BPF (Bayreuth Particle Finder). The results of our comparison show an overall good accordance but also indicate discrepancies concerning certain polymer types/clusters as well as the smallest MP size classes. Our study further demonstrates that a detailed comparison of MP algorithms is an essential prerequisite for a better comparability of MP data., (© 2023. The Author(s).)
- Published
- 2023
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66. Multi-feature round silicon membrane filters enable fractionation and analysis of small micro- and nanoplastics with Raman spectroscopy and nano-FTIR.
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Meyns M, Dietz F, Weinhold CS, Züge H, Finckh S, and Gerdts G
- Abstract
Visualization of small micro-(20-1 μm) and nanoplastics (<1 μm) combined with chemical identification is still a challenge. To address this, we designed and manufactured easy-to-handle silicon membrane filters with a standard round filter geometry of 25 mm in diameter and a 10 mm diameter filtration area, holding hexagonal sections with periodically arranged pores of either 250 nm or 1 μm. Due to their flat and reflective surface, the filters serve as a versatile substrate for spectroscopic identification of particles. Optical markers at different levels of magnification, including the bare eye, allow for an easy transfer and repositioning of samples between instruments and methods as well as for a re-measurement of nanoscale particles. We demonstrate how nanoscale particles of weakly absorbing polymers such as polyethylene and polystyrene are analyzed on these filters by nano-FTIR, a combination of atomic force microscopy and Fourier transform infrared spectroscopy. By sequential filtration we separated the fractions of small micro and nanoplastics from a degraded polylactic acid coffee cup lid and achieved subsequent identification by Raman and nano-FTIR spectroscopy. The applications presented in this study will enable future research regarding the identification of small polymer particles difficult to access by other methods.
- Published
- 2023
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67. No evidence of microplastic ingestion in emperor penguin chicks (Aptenodytes forsteri) from the Atka Bay colony (Dronning Maud Land, Antarctica).
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Leistenschneider C, Le Bohec C, Eisen O, Houstin A, Neff S, Primpke S, Zitterbart DP, Burkhardt-Holm P, and Gerdts G
- Subjects
- Animals, Humans, Microplastics, Antarctic Regions, Plastics, Ecosystem, Bays, Eating, Spheniscidae
- Abstract
Microplastic (<5 mm; MP) pollution has been an emerging threat for marine ecosystems around the globe with increasing evidence that even the world's most remote areas, including Antarctica, are no longer unaffected. Few studies however, have examined MP in Antarctic biota, and especially those from Antarctic regions with low human activity, meaning little is known about the extent to which biota are affected. The aim of this study was to investigate, for the first time, the occurrence of MP in the emperor penguin (Aptenodytes forsteri), the only penguin species breeding around Antarctica during the austral winter, and an endemic apex predator in the Southern Ocean. To assess MP ingestion, the gizzards of 41 emperor penguin chicks from Atka Bay colony (Dronning Maud Land, Antarctica), were dissected and analyzed for MP >500 μm using Attenuated Total Reflection Fourier-transform Infrared (ATR-FTIR) spectroscopy. A total of 85 putative particles, mostly in the shape of fibers (65.9 %), were sorted. However, none of the particles were identified as MP applying state-of-the-art methodology. Sorted fibers were further evidenced to originate from contamination during sample processing and analyses. We find that MP concentrations in the local food web of the Weddell Sea and Dronning Maud Land coastal and marginal sea-ice regions; the feeding grounds to chick-rearing emperor penguin adults, are currently at such low levels that no detectable biomagnification is occurring via trophic transfer. Being in contrast to MP studies on other Antarctic and sub-Antarctic penguin species, our comparative discussion including these studies, highlights the importance for standardized procedures for sampling, sample processing and analyses to obtain comparable results. We further discuss other stomach contents and their potential role for MP detection, as well as providing a baseline for the long-term monitoring of MP in apex predator species from this region., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022 The Authors. Published by Elsevier B.V. All rights reserved.)
- Published
- 2022
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68. Human footprints at hadal depths: interlayer and intralayer comparison of sediment cores from the Kuril Kamchatka trench.
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Abel SM, Primpke S, Wu F, Brandt A, and Gerdts G
- Subjects
- Ecosystem, Environmental Pollution, Humans, Pacific Ocean, Microplastics, Plastics
- Abstract
Microplastic (MP) pollution affects almost all ecosystems on Earth. Given the increasing plastic production worldwide and the durability of these polymers, concerns arise about the fate of this material in the environment. A candidate to consider as a depositional final sink of MP is the sea floor and its deepest representatives, hadal trenches, as ultimate sinks. In this study, 13 sediment samples were collected with a multiple-corer at depths between 5740 and 9450 m from the Kuril Kamchatka trench (KKT), in the Northwest (NW) Pacific Ocean. These samples were analysed for MP presence in the upper sediment layer, by slicing the first 5 cm of sediment cores into 1 cm horizontal layers. These were compared against each other and between the sampling areas, in order to achieve a detailed picture of the depositional system of the trench and small-scale perturbations such as bioturbation. The analyses revealed the presence of 215 to 1596 MP particles per kg
-1 sediment (dry weight), with a polymer composition represented by 14 polymer types and the prevalence of particles smaller than 25 μm. A heterogeneous microplastic distribution through the sediment column and different microplastic concentration and polymer types among sampling stations located in different areas of the trench reflects the dynamics of this environment and the numerous forces that drive the deposition processes and the in situ recast of this pollutant at the trench floor., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022 Elsevier B.V. All rights reserved.)- Published
- 2022
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69. Microplastics in two German wastewater treatment plants: Year-long effluent analysis with FTIR and Py-GC/MS.
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Roscher L, Halbach M, Nguyen MT, Hebeler M, Luschtinetz F, Scholz-Böttcher BM, Primpke S, and Gerdts G
- Subjects
- Environmental Monitoring methods, Fourier Analysis, Gas Chromatography-Mass Spectrometry, Microplastics, Plastics analysis, Pyrolysis, Spectroscopy, Fourier Transform Infrared, Water Pollutants, Chemical analysis, Water Purification
- Abstract
Microplastics (MP) have been recorded in various environments around the globe. For a better understanding of distribution patterns and for providing a basis for risk assessments, detailed data on MP concentrations and polymer compositions are required. This study investigated the effluents of two German wastewater treatment plants (WWTP) monthly over one year, in order to better understand their temporal input of MP into the receiving river systems. MP item data down to 11 μm were obtained by means of Fourier Transform Infrared (FTIR) spectroscopy under the application of an improved polymer database. Complementary mass data were obtained by pyrolysis gas chromatography-mass spectrometry (Py-GC/MS) (for one WWTP). Both FTIR and Py-GC/MS analysis revealed a homogeneous polymer composition over the year, with a general dominance of polyolefins. Elevated MP item and mass concentrations (maximum: 3 × 10
4 items m-3 and 3.8 × 103 μg m-3 ) were observed during winter months and were accompanied by either heavy rainfall (increased discharge and total organic carbon) or elevated turbidity values. These observations emphasize the need for the assessment of background parameters in future MP monitoring studies. By providing monthly data over one year on MP items and masses in WWTP effluents, this study helps enhancing the understanding of temporal MP dynamics and can act as a valuable reference point for future assessments., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022 Elsevier B.V. All rights reserved.)- Published
- 2022
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70. The travelling particles: community dynamics of biofilms on microplastics transferred along a salinity gradient.
- Author
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Song J, Beule L, Jongmans-Hochschulz E, Wichels A, and Gerdts G
- Abstract
Microplastics (MP), as novel substrata for microbial colonization within aquatic ecosystems, are a matter of growing concern due to their potential to propagate foreign or invasive species across different environments. MP are known to harbour a diversity of microorganisms, yet little is understood of the dynamics of their biofilms and their capacity to successfully displace these microorganisms across different aquatic ecosystems typically marked by steep salinity gradients. To address this, we performed an in situ sequential incubation experiment to simulate MP transport from riverine to coastal seawaters using synthetic (high-density polyethylene, HDPE and tyre wear, TW) and natural (Wood) substrata. Bacterial communities on incubated particles were compared to each other as well as to those in surrounding waters, and their dynamics along the gradient investigated. All communities differed significantly from each other in their overall structure along the salinity gradient and were shaped by different ecological processes. While HDPE communities were governed by environmental selection, those on TW and Wood were dominated by stochastic events of dispersal and drift. Upon transfer into coastal seawaters, an almost complete turnover was observed among HDPE and TW communities. While synthetic particles displaced a minor proportion of communities across the salinity gradient, some of these comprised putatively pathogenic and resistant taxa. Our findings present an extensive assessment of MP biofilms and their dynamics upon displacement across different aquatic systems, presenting new insights into the role of MP as transport vectors., (© 2022. The Author(s).)
- Published
- 2022
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71. Microplastics in the Weddell Sea (Antarctica): A Forensic Approach for Discrimination between Environmental and Vessel-Induced Microplastics.
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Leistenschneider C, Burkhardt-Holm P, Mani T, Primpke S, Taubner H, and Gerdts G
- Subjects
- Antarctic Regions, Environmental Monitoring, Plastics, Microplastics, Water Pollutants, Chemical analysis
- Abstract
Microplastic (MP) pollution has been found in the Southern Ocean surrounding Antarctica, but many local regions within this vast area remain uninvestigated. The remote Weddell Sea contributes to the global thermohaline circulation, and one of the two Antarctic gyres is located in that region. In the present study, we evaluate MP (>300 μm) concentration and composition in surface ( n = 34) and subsurface water samples ( n = 79, ∼11.2 m depth) of the Weddell Sea. All putative MP were analyzed by attenuated total reflection Fourier transform infrared (ATR-FTIR) spectroscopy. MP was found in 65% of surface and 11.4% of subsurface samples, with mean (±standard deviation (SD)) concentrations of 0.01 (±0.01 SD) MP m
-3 and 0.04 (±0.1 SD) MP m-3 , respectively, being within the range of previously reported values for regions south of the Polar Front. Additionally, we aimed to determine whether identified paint fragments ( n = 394) derive from the research vessel. Environmentally sampled fragments ( n = 101) with similar ATR-FTIR spectra to reference paints from the research vessel and fresh paint references generated in the laboratory were further subjected to micro-X-ray fluorescence spectroscopy (μXRF) to compare their elemental composition. This revealed that 45.5% of all recovered MP derived from vessel-induced contamination. However, 11% of the measured fragments could be distinguished from the reference paints via their elemental composition. This study demonstrates that differentiation based purely on visual characteristics and FTIR spectroscopy might not be sufficient for accurately determining sample contamination sources.- Published
- 2021
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72. Microplastic pollution in the Weser estuary and the German North Sea.
- Author
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Roscher L, Fehres A, Reisel L, Halbach M, Scholz-Böttcher B, Gerriets M, Badewien TH, Shiravani G, Wurpts A, Primpke S, and Gerdts G
- Subjects
- Environmental Monitoring, Estuaries, North Sea, Plastics, Microplastics, Water Pollutants, Chemical analysis
- Abstract
Microplastics (MP) are defined as synthetic organic pollutants sized <5 mm and have been recorded in various environments worldwide. Due to their small size, they pose a potential risk for many organisms throughout the food web. However, little is known about MP distribution patterns and associated transport mechanisms. Rivers may act as pathways for MP into marine environments. In this study, we investigate the occurrence of MP in the estuary and lower stretch of the second-largest German River, the Weser, representative of a significant interface between fresh water and marine environments. The aim of the study was to enhance the general understanding by providing novel, comprehensive data and suggestions for future studies on estuarine systems. Surface water samples of two different size classes were collected by ship using an on-board filtration system (11-500 μm fraction) and net sampling (500-5000 μm fraction). After a thorough sample preparation, all samples were analysed with Focal Plane Array (FPA) Fourier Transform Infrared (FTIR) spectroscopy and Attenuated Total Reflection (ATR) FTIR spectroscopy in order to obtain information on MP concentrations, polymer composition and size distribution. Our findings show highest concentrations in the 11-500 μm fraction (2.3 × 10
1 - 9.7 × 103 MP m-3 ), with the polymer cluster acrylates/polyurethanes(PUR)/varnish being dominant. The >500 μm fraction was dominated by polyethylene. Estimated MP concentrations generally increased in the Turbidity Maximum Zone (TMZ) and decreased towards the open sea. This study contributes to the current research by providing novel insights into the MP pollution of the estuary and lower stretch of an important European river and provides implications for future MP monitoring measures., (Copyright © 2021 Elsevier Ltd. All rights reserved.)- Published
- 2021
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73. Characterizing the multidimensionality of microplastics across environmental compartments.
- Author
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Kooi M, Primpke S, Mintenig SM, Lorenz C, Gerdts G, and Koelmans AA
- Subjects
- Environmental Monitoring, Humans, Plastics, Wastewater analysis, Microplastics, Water Pollutants, Chemical analysis
- Abstract
Understanding the multidimensionality of microplastics is essential for a realistic assessment of the risks these particles pose to the environment and human health. Here, we capture size, shape, area, polymer, volume and mass characteristics of >60,000 individual microplastic particles as continuous distributions. Particles originate from samples taken from different aquatic compartments, including surface water and sediments from the marine and freshwater environment, waste water effluents, and freshwater organisms. Data were obtained using state-of-the-art FTIR-imaging, using the same automated imaging post-processing software. We introduce a workflow with two quality criteria that assure minimum data quality loss due to volumetric and filter area subsampling. We find that probability density functions (PDFs) for particle length follow power law distributions, with median slopes ranging from 2.2 for marine surface water to 3.1 for biota samples, and that these slopes were compartment-specific. Polymer-specific PDFs for particle length demonstrated significant differences in slopes among polymers, hinting at polymer specific sources, removal or fragmentation processes. Furthermore, we provide PDFs for particle width, width to length ratio, area, specific surface area, volume and mass distributions and propose how these can represent the full diversity of toxicologically relevant dose metrics required for the assessment of microplastic risks., (Copyright © 2021. Published by Elsevier Ltd.)
- Published
- 2021
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74. Comparison and uncertainty evaluation of two centrifugal separators for microplastic sampling.
- Author
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Hildebrandt L, Zimmermann T, Primpke S, Fischer D, Gerdts G, and Pröfrock D
- Abstract
For commonly applied microplastic sampling approaches based on filtration, high throughput and no size-discrimination are conflicting goals. Therefore, we propose two efficient centrifugal separators for small microplastic sampling, namely the utilization of a hydrocyclone as well as a continuous flow centrifuge. Thorough method optimization was followed by application in an extensive sampling study to investigate the separators' retention behavior for particulate plastics from estuarine waters. Microplastic concentrations ranged from 193 to 2072 particles m
-3 . The most dominant identified polymer types were polypropylene, acrylates, polyvinyl chloride and polyethylene. More than 95% of particles were < 100 µm. For the first time in microplastic research, an expanded uncertainty was calculated according to the "Guide to the expression of Uncertainty in Measurement" (JCGM 100:2008). Bottom-up uncertainty evaluation revealed the different sampling methods (~ 44%), sample replicates (~ 26%) and the different detection techniques (~ 16%) as the major sources of uncertainty. Depending on the number of particles detected in the samples, the relative expanded uncertainty (Urel (k = 2)) ranged from 24% up to > 200% underpinning tremendous importance of sound uncertainty evaluation. Our results indicate that scientist should rethink many "observed patterns" in the literature due to being insignificant and herewith not real., (Copyright © 2021 The Authors. Published by Elsevier B.V. All rights reserved.)- Published
- 2021
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75. Cross-Hemisphere Study Reveals Geographically Ubiquitous, Plastic-Specific Bacteria Emerging from the Rare and Unexplored Biosphere.
- Author
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Scales BS, Cable RN, Duhaime MB, Gerdts G, Fischer F, Fischer D, Mothes S, Hintzki L, Moldaenke L, Ruwe M, Kalinowski J, Kreikemeyer B, Pedrotti ML, Gorsky G, Elineau A, Labrenz M, and Oberbeckmann S
- Subjects
- Bacteria metabolism, Biofilms growth & development, Geography, RNA, Ribosomal, 16S, Water Pollutants, Chemical analysis, Bacteria genetics, Bacteria isolation & purification, Microbiota, Plastics, Seawater microbiology
- Abstract
While it is now appreciated that the millions of tons of plastic pollution travelling through marine systems carry complex communities of microorganisms, it is still unknown to what extent these biofilm communities are specific to the plastic or selected by the surrounding ecosystem. To address this, we characterized and compared the microbial communities of microplastic particles, nonplastic (natural and wax) particles, and the surrounding waters from three marine ecosystems (the Baltic, Sargasso and Mediterranean seas) using high-throughput 16S rRNA gene sequencing. We found that biofilm communities on microplastic and nonplastic particles were highly similar to one another across this broad geographical range. The similar temperature and salinity profiles of the Sargasso and Mediterranean seas, compared to the Baltic Sea, were reflected in the biofilm communities. We identified plastic-specific operational taxonomic units (OTUs) that were not detected on nonplastic particles or in the surrounding waters. Twenty-six of the plastic-specific OTUs were geographically ubiquitous across all sampled locations. These geographically ubiquitous plastic-specific OTUs were mostly low-abundance members of their biofilm communities and often represented uncultured members of marine ecosystems. These results demonstrate the potential for plastics to be a reservoir of rare and understudied microbes, thus warranting further investigations into the dynamics and role of these microbes in marine ecosystems. IMPORTANCE This study represents one of the largest comparisons of biofilms from environmentally sampled plastic and nonplastic particles from aquatic environments. By including particles sampled through three separate campaigns in the Baltic, Sargasso, and Mediterranean seas, we were able to make cross-geographical comparisons and discovered common taxonomical signatures that define the plastic biofilm. For the first time, we identified plastic-specific bacteria that reoccur across marine regions. Our data reveal that plastics have selective properties that repeatedly enrich for similar bacteria regardless of location, potentially shifting aquatic microbial communities in areas with high levels of plastic pollution. Furthermore, we show that bacterial communities on plastic do not appear to be strongly influenced by polymer type, suggesting that other properties, such as the absorption and/or leaching of chemicals from the surface, are likely to be more important in the selection and enrichment of specific microorganisms.
- Published
- 2021
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76. Mycoplankton Biome Structure and Assemblage Processes Differ Along a Transect From the Elbe River Down to the River Plume and the Adjacent Marine Waters.
- Author
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Yang Y, Banos S, Gerdts G, Wichels A, and Reich M
- Abstract
Rivers are transport systems and supply adjacent ecosystems with nutrients. They also serve human well-being, for example as a source of food. Microorganism biodiversity is an important parameter for the ecological balance of river ecosystems. Despite the knowledge that fungi are key players in freshwater nutrient cycling and food webs, data on planktonic fungi of streams with higher stream order are scarce. This study aims to fill this knowledge gap by a fungi-specific 18S ribosomal RNA (rRNA) gene tag sequencing approach, investigating mycoplankton diversity in the Elbe River along a transect from shallow freshwater, to the estuary and river plume down to the adjacent marine waters (sections of seventh stream order number). Using multivariate analyses and the quantitative process estimates (QPEs) method, questions (i) of how mycoplankton communities as part of the river continuum change along the transect, (ii) what factors, spatial and environmental, play a role, and (iii) what assembly processes, such as selection or dispersion, operate along the transect, were addressed. The partitioning of mycoplankton communities into three significant distant biomes was mainly driven by local environmental conditions that were partly under spatial control. The assembly processes underlying the biomes also differed significantly. Thus, variable selection dominated the upstream sections, while undominated processes like ecological drift dominated the sections close to the river mouth and beyond. Dispersal played a minor role. The results suggest that the ecological versatility of the mycoplankton communities changes along the transect as response, for example, to a drastic change from an autotrophic to a heterotrophic system caused by an abrupt increase in the river depth. Furthermore, a significant salinity-dependent occurrence of diverse basal fungal groups was observed, with no clade found exclusively in marine waters. These results provide an important framework to help understand patterns of riverine mycoplankton communities and serve as basis for a further in-depth work so that fungi, as an important ecological organism group, can be integrated into models of, e.g., usage-balance considerations of rivers., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2021 Yang, Banos, Gerdts, Wichels and Reich.)
- Published
- 2021
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77. Systematic identification of microplastics in abyssal and hadal sediments of the Kuril Kamchatka trench.
- Author
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Abel SM, Primpke S, Int-Veen I, Brandt A, and Gerdts G
- Subjects
- Environmental Monitoring, Geologic Sediments, Oceans and Seas, Pacific Ocean, Plastics, Microplastics, Water Pollutants, Chemical analysis
- Abstract
The occurrence of microplastics throughout marine environments worldwide, from pelagic to benthic habitats, has become serious cause for concern. Hadal zones were recently described as the "trash bins of the oceans" and ultimate sink for marine plastic debris. The Kuril region covers a substantial area of the North Pacific Ocean and is characterised by high biological productivity, intense marine traffic through the Kuril straits, and anthropogenic activity. Moreover, strong tidal currents and eddy activity, as well as the influence of Pacific currents, have the potential for long distance transport and retention of microplastics in this area. To verify the hypothesis that the underlying Kuril Kamchatka Trench might accumulate microplastics from the surrounding environments and act as the final sink for high quantities of microplastics, we analysed eight sediment samples collected in the Kuril Kamchatka Trench at a depth range of 5143-8250 m during the Kuril Kamchatka Biodiversity Studies II (KuramBio II) expedition in summer 2016. Microplastics were characterised via Micro Fourier Transform Infrared spectroscopy. All samples were analysed in their entirety to avoid inaccuracies due to extrapolations of microplastic concentrations and polymer diversities, which would otherwise be based on commonly applied representative aliquots. The number of microplastic particles detected ranged from 14 to 209 kg
-1 sediment (dry weight) with a total of 15 different plastic polymers detected. Polypropylene accounted for the largest proportion (33.2%), followed by acrylates/polyurethane/varnish (19%) and oxidized polypropylene (17.4%). By comparing extrapolated sample aliquots with in toto results, it was shown that aliquot-based extrapolations lead to severe under- or overestimations of microplastic concentrations, and an underestimation of polymer diversity., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2020 Elsevier Ltd. All rights reserved.)- Published
- 2021
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78. Paraffin and other petroleum waxes in the southern North Sea.
- Author
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Lorenz C, Schafberg M, Roscher L, Meyer MS, Primpke S, Kraus UR, and Gerdts G
- Subjects
- Environmental Monitoring, North Sea, Paraffin, Plastics, Spectroscopy, Fourier Transform Infrared, Waxes, Petroleum, Water Pollutants, Chemical analysis
- Abstract
Petroleum waxes (PWs) are recognized as ubiquitously emerging marine pollutants. However, knowledge on their occurrence, particularly as persistent floaters of small size (<5 mm) in marine surface water, is scarce. For this study, 24 samples were collected in the North Sea by net-sampling (100 μm-mesh). Particles of wax-like appearance were detected at 14 stations. Similar appearing PWs from six stations with highest abundances were pooled per station and analyzed by ATR-FTIR (Attenuated total reflectance Fourier-transform infrared spectroscopy) and gas chromatography. Samples contained paraffin particles, being partly accompanied by substances like fatty acids and fatty alcohols. Using both analytical techniques provided a reliable detection of PWs and more details on their chemical composition. Furthermore, exemplarily the presence of PWs of 20-500 μm size was proven by μFTIR imaging. This study gives valuable insights into PW pollution in the North Sea, emphasizing the need for harmonized detection methods, ideally accompanying microplastics monitoring., (Copyright © 2020 Elsevier Ltd. All rights reserved.)
- Published
- 2021
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79. Rapid Identification and Quantification of Microplastics in the Environment by Quantum Cascade Laser-Based Hyperspectral Infrared Chemical Imaging.
- Author
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Primpke S, Godejohann M, and Gerdts G
- Subjects
- Environmental Monitoring, Lasers, Semiconductor, Plastics, Microplastics, Water Pollutants, Chemical analysis
- Abstract
The monitoring of the emerging contaminant, microplastics, in the environment, in water supply, and for food safety is of major interest to science, consumers, and governments. While the chemical analysis of these particles is considered mandatory, a rapid and reliable method for the determination of particle sizes, shapes, and numbers is missing, as existing methods are not fitting into current laboratory measurement routines. In this study, we present an approach for circumventing these issues through the application of quantum cascade laser-based microscopy combined with an automated data analysis. This method allows the measurement of an area of 144 mm
2 in 36 min, with a pixel resolution of 4.2 μm, which is an appropriate timeframe and spatial resolution for routine measurements. The performance was compared to the existing state-of-the-art Fourier transform infrared microscopy analyses. Further, the application of the method on various environmental samples was investigated to examine its capacity to provide number and variety of present particles. The described analytical procedure overcomes the last restrictions for schedulable and rapid microplastic monitoring, resulting in a highly detailed data set for particle numbers, particle shapes, and polymer types.- Published
- 2020
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80. Comparison of pyrolysis gas chromatography/mass spectrometry and hyperspectral FTIR imaging spectroscopy for the analysis of microplastics.
- Author
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Primpke S, Fischer M, Lorenz C, Gerdts G, and Scholz-Böttcher BM
- Abstract
Analysis of microplastics (MP) in environmental samples is an emerging field, which is performed with various methods and instruments based either on spectroscopy or thermoanalytical methods. In general, both approaches result in two different types of data sets that are either mass or particle number related. Depending on detection limits of the respective method and instrumentation the derived polymer composition trends may vary. In this study, we compare the results of hyperspectral Fourier-transform infrared (FTIR) imaging analysis and pyrolysis gas chromatography-mass spectrometry (Py-GC/MS) analysis performed on a set of environmental samples that differ in complexity and degree of microplastic contamination. The measurements were conducted consecutively, and on exactly the same sample. First, the samples were investigated with FTIR using aluminum oxide filters; subsequently, these were crushed, transferred to glass fiber filters, in pyrolysis cups, and measured via Py-GC/MS. After a general data harmonization step, the trends in MP contamination were thoroughly investigated with regard to the respective sample set and the derived polymer compositions. While the overall trends in MP contamination were very similar, differences were observed in the polymer compositions. Furthermore, polymer masses were empirically calculated from FTIR data and compared with the Py-GC/MS results. Here, a most plausible shape-related overestimation of the calculated polymer masses was observed in samples with larger particles and increased particle numbers. Taking into account the different measurement principles of both methods, all results were examined and discussed, and future needs for harmonization of intermethodological results were identified and highlighted. Graphical abstract.
- Published
- 2020
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81. Toward the Systematic Identification of Microplastics in the Environment: Evaluation of a New Independent Software Tool (siMPle) for Spectroscopic Analysis.
- Author
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Primpke S, Cross RK, Mintenig SM, Simon M, Vianello A, Gerdts G, and Vollertsen J
- Subjects
- Environmental Monitoring methods, Microplastics analysis, Software, Spectroscopy, Fourier Transform Infrared methods, Wastewater chemistry, Water Pollutants, Chemical analysis
- Abstract
Microplastics (MP) are ubiquitous within the environment, but the approaches to analysis of this contaminant are currently quite diverse, with a number of analytical methods available. The comparability of results is hindered as even for a single analytical method such as Fourier transform infrared spectroscopy (FT-IR) the different instruments currently available do not allow a harmonized analysis. To overcome this limitation, a new free of charge software tool, allowing the systematic identification of MP in the environment (siMPle) was developed. This software tool allows a rapid and harmonized analysis of MP across FT-IR systems from different manufacturers (Bruker Hyperion 3000, Agilent Cary 620/670, PerkinElmer Spotlight 400, and Thermo Fischer Scientific Nicolet iN10). Using the same database and the automated analysis pipeline in siMPle, MP were identified in samples that were analyzed with instruments with different detector systems as well as optical resolutions and the results discussed.
- Published
- 2020
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82. Bacterial biofilms colonizing plastics in estuarine waters, with an emphasis on Vibrio spp. and their antibacterial resistance.
- Author
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Laverty AL, Primpke S, Lorenz C, Gerdts G, and Dobbs FC
- Subjects
- Anti-Bacterial Agents pharmacology, Atlantic Ocean, DNA, Bacterial isolation & purification, Drug Resistance, Bacterial genetics, Gene Transfer, Horizontal, RNA, Ribosomal, 16S genetics, Seawater microbiology, Vibrio drug effects, Vibrio genetics, Biofilms drug effects, Estuaries, Plastics, Vibrio isolation & purification, Water Pollutants
- Abstract
Since plastics degrade very slowly, they remain in the environment on much longer timescales than most natural organic substrates and provide a novel habitat for colonization by bacterial communities. The spectrum of relationships between plastics and bacteria, however, is little understood. The first objective of this study was to examine plastics as substrates for communities of Bacteria in estuarine surface waters. We used next-generation sequencing of the 16S rRNA gene to characterize communities from plastics collected in the field, and over the course of two colonization experiments, from biofilms that developed on plastic (low-density polyethylene, high-density polyethylene, polypropylene, polycarbonate, polystyrene) and glass substrates placed in the environment. Both field sampling and colonization experiments were conducted in estuarine tributaries of the lower Chesapeake Bay. As a second objective, we concomitantly analyzed biofilms on plastic substrates to ascertain the presence and abundance of Vibrio spp. bacteria, then isolated three human pathogens, V. cholerae, V. parahaemolyticus, and V. vulnificus, and determined their antibiotic-resistant profiles. In both components of this study, we compared our results with analyses conducted on paired samples of estuarine water. This research adds to a nascent literature that suggests environmental factors govern the development of bacterial communities on plastics, more so than the characteristics of the plastic substrates themselves. In addition, this study is the first to culture three pathogenic vibrios from plastics in estuaries, reinforcing and expanding upon earlier reports of plastic pollution as a habitat for Vibrio species. The antibiotic resistance detected among the isolates, coupled with the longevity of plastics in the aqueous environment, suggests biofilms on plastics have potential to persist and serve as focal points of potential pathogens and horizontal gene transfer., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2020
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83. Quantifying microplastic translocation from feed to the fillet in European sea bass Dicentrarchus labrax.
- Author
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Zeytin S, Wagner G, Mackay-Roberts N, Gerdts G, Schuirmann E, Klockmann S, and Slater M
- Subjects
- Animals, Aquaculture, Microplastics, Plastics, Seafood analysis, Bass
- Abstract
Competing Interests: Declaration of competing interest We wish to confirm that there are no known conflicts of interest associated with this publication and there has been no significant financial support for this work that could have influenced its outcome.
- Published
- 2020
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84. Seasonal Dynamics of Pelagic Mycoplanktonic Communities: Interplay of Taxon Abundance, Temporal Occurrence, and Biotic Interactions.
- Author
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Banos S, Gysi DM, Richter-Heitmann T, Glöckner FO, Boersma M, Wiltshire KH, Gerdts G, Wichels A, and Reich M
- Abstract
Marine fungi are an important component of pelagic planktonic communities. However, it is not yet clear how individual fungal taxa are integrated in marine processes of the microbial loop and food webs. Most likely, biotic interactions play a major role in shaping the fungal community structure. Thus, the aim of our work was to identify possible biotic interactions of mycoplankton with phytoplankton and zooplankton groups and among fungi, and to investigate whether there is coherence between interactions and the dynamics, abundance and temporal occurrence of individual fungal OTUs. Marine surface water was sampled weekly over the course of 1 year, in the vicinity of the island of Helgoland in the German Bight (North Sea). The mycoplankton community was analyzed using 18S rRNA gene tag-sequencing and the identified dynamics were correlated to environmental data including phytoplankton, zooplankton, and abiotic factors. Finally, co-occurrence patterns of fungal taxa were detected with network analyses based on weighted topological overlaps (wTO). Of all abundant and persistent OTUs, 77% showed no biotic relations suggesting a saprotrophic lifestyle. Of all other fungal OTUs, nearly the half (44%) had at least one significant negative relationship, especially with zooplankton and other fungi, or to a lesser extent with phytoplankton. These findings suggest that mycoplankton OTUs are embedded into marine food web chains via highly complex and manifold relationships such as parasitism, predation, grazing, or allelopathy. Furthermore, about one third of all rare OTUs were part of a dense fungal co-occurrence network probably stabilizing the fungal community against environmental changes and acting as functional guilds or being involved in fungal cross-feeding. Placed in an ecological context, strong antagonistic relationships of the mycoplankton community with other components of the plankton suggest that: (i) there is a top-down control by fungi on zooplankton and phytoplankton; (ii) fungi serve as a food source for zooplankton and thereby transfer nutrients and organic material; (iii) the dynamics of fungi harmful to other plankton groups are controlled by antagonistic fungal taxa., (Copyright © 2020 Banos, Gysi, Richter-Heitmann, Glöckner, Boersma, Wiltshire, Gerdts, Wichels and Reich.)
- Published
- 2020
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85. The Travelling Particles: Investigating microplastics as possible transport vectors for multidrug resistant E. coli in the Weser estuary (Germany).
- Author
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Song J, Jongmans-Hochschulz E, Mauder N, Imirzalioglu C, Wichels A, and Gerdts G
- Subjects
- Anti-Bacterial Agents, Estuaries, Germany, Microbial Sensitivity Tests, Microplastics, North Sea, beta-Lactamases, Escherichia coli
- Abstract
The prevalence of multidrug-resistant Gram-negative bacteria in aquatic environments has been a long withstanding health concern, namely extended-spectrum beta-lactamase (ESBL) producing Escherichia coli. Given increasing reports on microplastic (MP) pollution in these environments, it has become crucial to better understand the role of MP particles as transport vectors for such multidrug-resistant bacteria. In this study, an incubation experiment was designed where particles of both synthetic and natural material (HDPE, tyre wear, and wood) were sequentially incubated at multiple sites along a salinity gradient from the Lower Weser estuary (Germany) to the offshore island Helgoland (German Bight, North Sea). Following each incubation period, particle biofilms and water samples were assessed for ESBL-producing E. coli, first by the enrichment and detection of E. coli using Fluorocult® LMX Broth followed by cultivation on CHROMAgar™ ESBL media to select for ESBL-producers. Results showed that general E. coli populations were present on the surfaces of wood particles across all sites but none were found to produce ESBLs. Additionally, neither HDPE nor tyre wear particles were found to harbour any E. coli. Conversely, ESBL-producing E. coli were present in surrounding waters from all sites, 64% of which conferred resistances against up to 3 other antibiotic groups, additional to the beta-lactam resistances intrinsic to ESBL-producers. This study provides a first look into the potential of MP to harbour and transport multidrug-resistant E. coli across different environments and the approach serves as an important precursor to further studies on other potentially harmful MP-colonizing species., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2020 Elsevier B.V. All rights reserved.)
- Published
- 2020
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86. Tying up Loose Ends of Microplastic Pollution in the Arctic: Distribution from the Sea Surface through the Water Column to Deep-Sea Sediments at the HAUSGARTEN Observatory.
- Author
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Tekman MB, Wekerle C, Lorenz C, Primpke S, Hasemann C, Gerdts G, and Bergmann M
- Subjects
- Arctic Regions, Environmental Monitoring, Geologic Sediments, Microplastics, Water, Plastics, Water Pollutants, Chemical
- Abstract
Recent studies have shown that despite its remoteness, the Arctic region harbors some of the highest microplastic (MP) concentrations worldwide. Here, we present the results of a sampling campaign to assess the vertical distribution of MP particles (>11 μm) at five stations of the HAUSGARTEN observatory. Water column samples were taken with large volume pumps by filtering 218-561 L of seawater at two to four depth strata (near-surface, ∼300 m, ∼1000 m, and above seafloor), and sediment samples were taken with a multiple corer. MP concentrations in the water column ranged between 0 and 1287 N m
-3 and in the sediment from 239 to 13 331 N kg-1 . Fourier transform infrared spectroscopy (FTIR) imaging with automated data analysis showed that polyamide (39%) and ethylene-propylene-diene rubber (23%) were the most abundant polymers within the water samples and polyethylene-chlorinated (31%) in sediments. MPs ≤ 25 μm accounted for more than half of the synthetic particles in every sample. The largest MP particle recorded was in the 200 μm size class. The concentrations of fibers were not reported, as fiber detection by FTIR imaging was not available at the time of analyses. Two- and three-dimensional simulations of particle transport trajectories suggest different pathways for certain polymer types. A positive correlation between MP size composition and particulate organic carbon indicates interactions with biological processes in the water column.- Published
- 2020
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87. Potentially human pathogenic Vibrio spp. in a coastal transect: Occurrence and multiple virulence factors.
- Author
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Hackbusch S, Wichels A, Gimenez L, Döpke H, and Gerdts G
- Subjects
- Humans, North Sea, Virulence, Virulence Factors, Vibrio
- Abstract
An increase in human Vibrio spp. infections has been linked to climate change related events, in particular to seawater warming and heatwaves. However, there is a distinct lack of research of pathogenic Vibrio spp. occurrences in the temperate North Sea, one of the fastest warming seas globally. Particularly in the German Bight, Vibrio investigations are still scarce. This study focuses on the spatio-temporal quantification and pathogenic characterization of V. parahaemolyticus, V. vulnificus and V. cholerae over the course of 14 months. Species-specific MPN-PCR (Most probable number - polymerase chain reaction) conducted on selectively enriched surface water samples revealed seasonal patterns of all three species with increased abundances during summer months. The extended period of warm seawater coincided with prolonged Vibrio spp. occurrences in the German Bight. Temperature and nitrite were the factors explaining variations in Vibrio spp. abundances after generalized additive mixed models. The specific detection of pathogenic markers via PCR revealed trh-positive V. parahaemolyticus, pathogenic V. vulnificus (nanA, manIIA, PRXII) and V. cholerae serotype O139 presence. Additionally, spatio-temporally varying virulence profiles of V. cholerae with multiple accessory virulence-associated genes, such as the El Tor variant hemolysin (hlyAET), acyltransferase of the repeats-in-toxin cluster (rtxC), Vibrio 7th pandemic island II (VSP-II), Type III Secretion System (TTSS) and the Cholix Toxin (chxA) were detected. Overall, this study highlights that environmental human pathogenic Vibrio spp. comprise a reservoir of virulence-associated genes in the German Bight, especially in estuarine regions. Due to their known vast genetic plasticity, we point to the possible emergence of highly pathogenic V. cholerae strains. Particularly, the presence of V. cholerae serotype O139 is unusual and needs urgent continuous surveillance. Given the predictions of further warming and more frequent heatwave events, human pathogenic Vibrio spp. should be seriously considered as a developing risk to human health in the German Bight., (Copyright © 2019 Elsevier B.V. All rights reserved.)
- Published
- 2020
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88. Using FTIRS as pre-screening method for detection of microplastic in bulk sediment samples.
- Author
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Hahn A, Gerdts G, Völker C, and Niebühr V
- Abstract
We present calibration models for the detection of two types of plastic (LDPE, PET) in sediments, developed from analysis of synthetic sediment mixtures and application of Fourier transform infrared spectroscopy (FTIRS) and partial least squares regression (PLSR) modeling. Synthetic sediment mixtures were produced using ground plastic particles mixed with various different sediment matrixes yielding LDPE and PET contents ranging from 0 to 5 wt%. The resulting PLSR calibration models between the FTIRS spectral information and the defined plastic concentration of the synthetic sediment mixtures show strong cross-validated correlations (R
2 CV = 0.72 and 0.61; 14.4% and 12.2% when expressed as % of gradient). Application of the calibration to natural sediments shows that the method can be used to detect the presence of microplastics in sediment. The results are only semi-quantitative and semi-qualitative, and the method is suitable mainly for samples with very high microplastic concentrations (>1%). However the major advantage of this procedure is the time and cost efficiency. For studies with large amounts of samples (e.g. monitoring applications) we recommend this method as a pre-screening tool for selecting samples with plastic content for further analysis.CV = 0.72 and 0.61; 14.4% and 12.2% when expressed as % of gradient). Application of the calibration to natural sediments shows that the method can be used to detect the presence of microplastics in sediment. The results are only semi-quantitative and semi-qualitative, and the method is suitable mainly for samples with very high microplastic concentrations (>1%). However the major advantage of this procedure is the time and cost efficiency. For studies with large amounts of samples (e.g. monitoring applications) we recommend this method as a pre-screening tool for selecting samples with plastic content for further analysis., (Copyright © 2019 Elsevier B.V. All rights reserved.)- Published
- 2019
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89. Spatial distribution of microplastics in sediments and surface waters of the southern North Sea.
- Author
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Lorenz C, Roscher L, Meyer MS, Hildebrandt L, Prume J, Löder MGJ, Primpke S, and Gerdts G
- Subjects
- North Sea, Polypropylenes analysis, Polyurethanes analysis, Seawater chemistry, Spatial Analysis, Environmental Monitoring methods, Geologic Sediments chemistry, Plastics analysis, Water Pollutants, Chemical analysis
- Abstract
Microplastic pollution within the marine environment is of pressing concern globally. Accordingly, spatial monitoring of microplastic concentrations, composition and size distribution may help to identify sources and entry pathways, and hence allow initiating focused mitigation. Spatial distribution patterns of microplastics were investigated in two compartments of the southern North Sea by collecting sublittoral sediment and surface water samples from 24 stations. Large microplastics (500-5000 μm) were detected visually and identified using attenuated total reflection (ATR) Fourier transform infrared (FTIR) spectroscopy. The remaining sample was digested enzymatically, concentrated onto filters and analyzed for small microplastics (11-500 μm) using Focal Plane Array (FPA) FTIR imaging. Microplastics were detected in all samples with concentrations ranging between 2.8 and 1188.8 particles kg
-1 for sediments and 0.1-245.4 particles m-3 for surface waters. On average 98% of microplastics were <100 μm in sediments and 86% in surface waters. The most prevalent polymer types in both compartments were polypropylene, acrylates/polyurethane/varnish, and polyamide. However, polymer composition differed significantly between sediment and surface water samples as well as between the Frisian Islands and the English Channel sites. These results show that microplastics are not evenly distributed, in neither location nor size, which is illuminating regarding the development of monitoring protocols., (Copyright © 2019 Elsevier Ltd. All rights reserved.)- Published
- 2019
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90. White and wonderful? Microplastics prevail in snow from the Alps to the Arctic.
- Author
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Bergmann M, Mützel S, Primpke S, Tekman MB, Trachsel J, and Gerdts G
- Abstract
Microplastics (MPs) are ubiquitous, and considerable quantities prevail even in the Arctic; however, there are large knowledge gaps regarding pathways to the North. To assess whether atmospheric transport plays a role, we analyzed snow samples from ice floes in Fram Strait. For comparison, we investigated snow samples from remote (Swiss Alps) and populated (Bremen, Bavaria) European sites. MPs were identified by Fourier transform infrared imaging in 20 of 21 samples. The MP concentration of Arctic snow was significantly lower (0 to 14.4 × 10
3 N liter-1 ) than European snow (0.19 × 103 to 154 × 103 N liter-1 ) but still substantial. Polymer composition varied strongly, but varnish, rubber, polyethylene, and polyamide dominated overall. Most particles were in the smallest size range indicating large numbers of particles below the detection limit of 11 μm. Our data highlight that atmospheric transport and deposition can be notable pathways for MPs meriting more research.- Published
- 2019
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91. Microplastic Pollution in Benthic Midstream Sediments of the Rhine River.
- Author
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Mani T, Primpke S, Lorenz C, Gerdts G, and Burkhardt-Holm P
- Subjects
- Environmental Monitoring, Geologic Sediments, Rivers, Plastics, Water Pollutants, Chemical
- Abstract
Rivers are major transport vectors for microplastics (MP) toward the sea. However, there is evidence that MP can temporarily or permanently be inhibited from migrating downstream by retention in sediments or ingestion by organisms. MP concentrations, compositions, and fate within the different compartments of the fluvial environment are poorly understood. Here, benthic, midstream sediments of two undammed, open-flowing stretches were investigated in the Rhine River, one of the world's busiest inland waterways. Twenty-five samples were collected at ten sites via riverbed access through a diving bell or dredging. We performed the first comprehensive analysis of riverbed sediment aliquots that avoids visual selection bias using state-of-the art automated micro-Fourier-transform infrared spectroscopy (μFTIR) imaging. MP numbers ranged between 0.26 ± 0.01 and 11.07 ± 0.6 × 10
3 MP kg-1 while MP particles <75 μm accounted for a mean numerical proportion ± SD of 96 ± 6%. MP concentrations decreased with sediment depth. Eighteen polymers were identified in the size range of 11-500 μm; the acrylates/polyurethane/varnish (APV) cluster was found at all sites (mean numerical proportion, 70 ± 19%), possibly indicating particulate pollution from ship antifouling paint. Overall, polymers denser than freshwater (>1 g cm-3 ) dominated (85 ± 18%), which contrasts the large proportions of low-density polymers previously reported in near-surface compartments of the Rhine.- Published
- 2019
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92. The Plastisphere - Uncovering tightly attached plastic "specific" microorganisms.
- Author
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Kirstein IV, Wichels A, Gullans E, Krohne G, and Gerdts G
- Subjects
- Animals, Bacteria metabolism, Humans, Plastics chemistry, Polymers chemistry, RNA, Ribosomal, 16S, Seawater chemistry, Waste Products, Water Pollutants, Chemical adverse effects, Water Pollutants, Chemical chemistry, Bacteria genetics, Biofilms drug effects, Marine Biology, Plastics adverse effects
- Abstract
In order to understand the degradation potential of plastics in the marine environment, microorganisms that preferentially colonize and interact with plastic surfaces, as opposed to generalists potentially colonising everything, need to be identified. Accordingly, it was hypothesized that i.) plastic "specific" microorganisms are closely attached to the polymeric surface and ii.) that specificity of plastics biofilms are rather related to members of the rare biosphere. To answer these hypotheses, a three phased experiment to stepwise uncover closely attached microbes was conducted. In Phase 1, nine chemically distinct plastic films and glass were incubated in situ for 21 months in a seawater flow through system. In Phase 2, a high-pressure water jet treatment technique was used to remove the upper biofilm layers to further, in Phase 3, enrich a plastic "specific" community. To proof whether microbes colonizing different plastics are distinct from each other and from other inert hard substrates, the bacterial communities of these different substrates were analysed using 16S rRNA gene tag sequencing. Our findings indicate that tightly attached microorganisms account to the rare biosphere and suggest the presence of plastic "specific" microorganisms/assemblages which could benefit from the given plastic properties or at least grow under limited carbon resources., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2019
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93. Different stories told by small and large microplastics in sediment - first report of microplastic concentrations in an urban recipient in Norway.
- Author
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Haave M, Lorenz C, Primpke S, and Gerdts G
- Subjects
- Environmental Monitoring methods, Estuaries, Geologic Sediments chemistry, Norway, Nylons analysis, Particle Size, Polyurethanes analysis, Spectroscopy, Fourier Transform Infrared, Wastewater, Geologic Sediments analysis, Plastics analysis, Water Pollutants, Chemical analysis
- Abstract
Microplastics (MP) in sediments from discharge sites for wastewater and deposition sites in deep regions in an urban fjord in Norway were extracted by density separation in a Microplastic Sediment Separator with ZnCl
2 . Particles (>11 μm) were identified using FTIR. Twenty different polymer types were identified, at concentrations from 12,000 to 200,000 particles kg-1 dw. Over 95% of the MP were smaller than 100 μm. High deposition of small MP agreed with known areas for organic deposition. Polyurethane acrylate resins dominated the small MP while polyamide fibers dominated the larger MP. Particles >500 μm showed different maximum concentrations and spatial distribution from the smaller particles. This study is the first to report concentration ranges of identified plastic particles from a Norwegian fjord, down to sizes below the limit of visual identification. The results provides a baseline for future comparison, and point at relevant sizes for environmental risk assessments., (Copyright © 2019 Elsevier Ltd. All rights reserved.)- Published
- 2019
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94. Comparison of Raman and Fourier Transform Infrared Spectroscopy for the Quantification of Microplastics in the Aquatic Environment.
- Author
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Cabernard L, Roscher L, Lorenz C, Gerdts G, and Primpke S
- Subjects
- Environmental Monitoring, North Sea, Spectroscopy, Fourier Transform Infrared, Plastics, Water Pollutants, Chemical
- Abstract
Microplastics (MPs, <5 mm) have been reported as emerging environmental contaminants, but reliable data are still lacking. We compared the two most promising techniques for MP analysis, namely, Raman and Fourier transform infrared (FTIR) spectroscopy, by analyzing MPs extracted from North Sea surface waters. Microplastics >500 μm were visually sorted and manually analyzed by μ-Raman and attenuated total reflection (ATR)-FTIR spectroscopy. Microplastics ≤500 μm were concentrated on gold-coated filters and analyzed by automated single-particle exploration coupled to μ-Raman (ASPEx-μ-Raman) and FTIR imaging (reflection mode). The number of identified MPs >500 μm was slightly higher for μ-Raman (+23%) than ATR-FTIR analysis. Concerning MPs ≤500 μm, ASPEx-μ-Raman quantified two-times higher MP numbers but required a four-times higher analysis time compared to FTIR imaging. Because ASPEx-μ-Raman revealed far higher MP concentrations (38-2621 particles m
-3 ) compared to the results of previous water studies (0-559 particles m-3 ), the environmental concentration of MPs ≤500 μm may have been underestimated until now. This may be attributed to the exceptional increase in concentration with decreasing MP size found in this work. Our results demonstrate the need for further research to enable time-efficient routine application of ASPEx-μ-Raman for reliable MP counting down to 1 μm.- Published
- 2018
- Full Text
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95. Mature biofilm communities on synthetic polymers in seawater - Specific or general?
- Author
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Kirstein IV, Wichels A, Krohne G, and Gerdts G
- Subjects
- Bacteria classification, Bacteria genetics, Microbiota genetics, RNA, Ribosomal, 16S genetics, RNA, Ribosomal, 18S genetics, Bacterial Physiological Phenomena, Biofilms, Microbiota physiology, Polymers, Seawater microbiology
- Abstract
To understand the ecological impacts of the "Plastisphere", those microbes need to be identified that preferentially colonize and interact with synthetic polymer surfaces, as opposed to general surface colonizers. It was hypothesized that the microbial biofilm composition varies distinctly between different substrates. A long-term incubation experiment was conducted (15month) with nine different synthetic polymer films as substrate as well as glass using a natural seawater flow-through system. To identify colonizing microorganisms, 16S and 18SrRNA gene tag sequencing was performed. The microbial biofilms of these diverse artificial surfaces were visualized via scanning electron microscopy. Biofilm communities attached to synthetic polymers are distinct from glass associated biofilms; apparently a more general marine biofilm core community serves as shared core among all synthetic polymers rather than a specific synthetic polymer community. Nevertheless, characteristic and discriminatory taxa of significantly different biofilm communities were identified, indicating their specificity to a given substrate., (Copyright © 2018 Elsevier Ltd. All rights reserved.)
- Published
- 2018
- Full Text
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96. Reference database design for the automated analysis of microplastic samples based on Fourier transform infrared (FTIR) spectroscopy.
- Author
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Primpke S, Wirth M, Lorenz C, and Gerdts G
- Abstract
The identification of microplastics becomes increasingly challenging with decreasing particle size and increasing sample heterogeneity. The analysis of microplastic samples by Fourier transform infrared (FTIR) spectroscopy is a versatile, bias-free tool to succeed at this task. In this study, we provide an adaptable reference database, which can be applied to single-particle identification as well as methods like chemical imaging based on FTIR microscopy. The large datasets generated by chemical imaging can be further investigated by automated analysis, which does, however, require a carefully designed database. The novel database design is based on the hierarchical cluster analysis of reference spectra in the spectral range from 3600 to 1250 cm
-1 . The hereby generated database entries were optimized for the automated analysis software with defined reference datasets. The design was further tested for its customizability with additional entries. The final reference database was extensively tested on reference datasets and environmental samples. Data quality by means of correct particle identification and depiction significantly increased compared to that of previous databases, proving the applicability of the concept and highlighting the importance of this work. Our novel database provides a reference point for data comparison with future and previous microplastic studies that are based on different databases. Graphical abstract ᅟ.- Published
- 2018
- Full Text
- View/download PDF
97. Arctic sea ice is an important temporal sink and means of transport for microplastic.
- Author
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Peeken I, Primpke S, Beyer B, Gütermann J, Katlein C, Krumpen T, Bergmann M, Hehemann L, and Gerdts G
- Abstract
Microplastics (MP) are recognized as a growing environmental hazard and have been identified as far as the remote Polar Regions, with particularly high concentrations of microplastics in sea ice. Little is known regarding the horizontal variability of MP within sea ice and how the underlying water body affects MP composition during sea ice growth. Here we show that sea ice MP has no uniform polymer composition and that, depending on the growth region and drift paths of the sea ice, unique MP patterns can be observed in different sea ice horizons. Thus even in remote regions such as the Arctic Ocean, certain MP indicate the presence of localized sources. Increasing exploitation of Arctic resources will likely lead to a higher MP load in the Arctic sea ice and will enhance the release of MP in the areas of strong seasonal sea ice melt and the outflow gateways.
- Published
- 2018
- Full Text
- View/download PDF
98. Recurrent patterns of microdiversity in a temperate coastal marine environment.
- Author
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Chafee M, Fernàndez-Guerra A, Buttigieg PL, Gerdts G, Eren AM, Teeling H, and Amann RI
- Subjects
- Bacteria genetics, Eutrophication, Phytoplankton genetics, RNA, Ribosomal, 16S genetics, Seasons, Seawater microbiology, Bacteria isolation & purification, Biodiversity, Phytoplankton isolation & purification
- Abstract
Temperate coastal marine environments are replete with complex biotic and abiotic interactions that are amplified during spring and summer phytoplankton blooms. During these events, heterotrophic bacterioplankton respond to successional releases of dissolved organic matter as algal cells are lysed. Annual seasonal shifts in the community composition of free-living bacterioplankton follow broadly predictable patterns, but whether similar communities respond each year to bloom disturbance events remains unknown owing to a lack of data sets, employing high-frequency sampling over multiple years. We capture the fine-scale microdiversity of these events with weekly sampling using a high-resolution method to discriminate 16S ribosomal RNA gene amplicons that are >99% identical. Furthermore, we used 2 complete years of data to facilitate identification of recurrent sub-networks of co-varying microbes. We demonstrate that despite inter-annual variation in phytoplankton blooms and despite the dynamism of a coastal-oceanic transition zone, patterns of microdiversity are recurrent during both bloom and non-bloom conditions. Sub-networks of co-occurring microbes identified reveal that correlation structures between community members appear quite stable in a seasonally driven response to oligotrophic and eutrophic conditions.
- Published
- 2018
- Full Text
- View/download PDF
99. Enzymatic Purification of Microplastics in Environmental Samples.
- Author
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Löder MGJ, Imhof HK, Ladehoff M, Löschel LA, Lorenz C, Mintenig S, Piehl S, Primpke S, Schrank I, Laforsch C, and Gerdts G
- Subjects
- North Sea, Organic Chemicals, Spectroscopy, Fourier Transform Infrared, Plastics, Wastewater, Water Pollutants, Chemical
- Abstract
Micro-Fourier transform infrared (micro-FTIR) spectroscopy and Raman spectroscopy enable the reliable identification and quantification of microplastics (MPs) in the lower micron range. Since concentrations of MPs in the environment are usually low, the large sample volumes required for these techniques lead to an excess of coenriched organic or inorganic materials. While inorganic materials can be separated from MPs using density separation, the organic fraction impedes the ability to conduct reliable analyses. Hence, the purification of MPs from organic materials is crucial prior to conducting an identification via spectroscopic techniques. Strong acidic or alkaline treatments bear the danger of degrading sensitive synthetic polymers. We suggest an alternative method, which uses a series of technical grade enzymes for purifying MPs in environmental samples. A basic enzymatic purification protocol (BEPP) proved to be efficient while reducing 98.3 ± 0.1% of the sample matrix in surface water samples. After showing a high recovery rate (84.5 ± 3.3%), the BEPP was successfully applied to environmental samples from the North Sea where numbers of MPs range from 0.05 to 4.42 items m
-3 . Experiences with different environmental sample matrices were considered in an improved and universally applicable version of the BEPP, which is suitable for focal plane array detector (FPA)-based micro-FTIR analyses of water, wastewater, sediment, biota, and food samples.- Published
- 2017
- Full Text
- View/download PDF
100. High Quantities of Microplastic in Arctic Deep-Sea Sediments from the HAUSGARTEN Observatory.
- Author
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Bergmann M, Wirzberger V, Krumpen T, Lorenz C, Primpke S, Tekman MB, and Gerdts G
- Subjects
- Arctic Regions, Chlorophyll A, Ecosystem, Geologic Sediments chemistry, Ice Cover, Plastics chemistry, Polyethylene analysis, Polymers, Chlorophyll chemistry, Environmental Monitoring methods, Geologic Sediments analysis, Plastics analysis, Polyethylene chemistry, Water Pollutants, Chemical analysis
- Abstract
Although mounting evidence suggests the ubiquity of microplastic in aquatic ecosystems worldwide, our knowledge of its distribution in remote environments such as Polar Regions and the deep sea is scarce. Here, we analyzed nine sediment samples taken at the HAUSGARTEN observatory in the Arctic at 2340-5570 m depth. Density separation by MicroPlastic Sediment Separator and treatment with Fenton's reagent enabled analysis via Attenuated Total Reflection FTIR and μFTIR spectroscopy. Our analyses indicate the wide spread of high numbers of microplastics (42-6595 microplastics kg
-1 ). The northernmost stations harbored the highest quantities, indicating sea ice as a possible transport vehicle. A positive correlation between microplastic abundance and chlorophyll a content suggests vertical export via incorporation in sinking (ice-) algal aggregates. Overall, 18 different polymers were detected. Chlorinated polyethylene accounted for the largest proportion (38%), followed by polyamide (22%) and polypropylene (16%). Almost 80% of the microplastics were ≤25 μm. The microplastic quantities are among the highest recorded from benthic sediments. This corroborates the deep sea as a major sink for microplastics and the presence of accumulation areas in this remote part of the world, fed by plastics transported to the North via the Thermohaline Circulation.- Published
- 2017
- Full Text
- View/download PDF
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