84 results on '"Geovanny F. Perez"'
Search Results
52. Young Children with Cystic Fibrosis Have Decreased Airway Microbial Diversity Compared to Healthy Controls of Similar Age
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Keith A. Crandall, Aszia Burrell, Andrea Hahn, Robert J. Freishtat, H.R. Chaney, Anastassios C. Koumbourlis, R. McCarter, I.R. Sami-Zakhari, Edith T. Zemanick, E. Ansusinha, and Geovanny F. Perez
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business.industry ,Microbial diversity ,Medicine ,Physiology ,business ,Airway ,medicine.disease ,Cystic fibrosis - Published
- 2019
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53. TSLP Is the Predominant Innate Type 2 Cytokine Produced by the Human Infant Airway Epithelium
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M.A. Arroyo Morr, S. Naime, Dinesh K. Pillai, Gustavo Nino, Elizabeth Chorvinsky, Geovanny F. Perez, and K. Salka
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medicine.anatomical_structure ,Cytokine ,Infant airway ,business.industry ,medicine.medical_treatment ,Immunology ,medicine ,business ,Epithelium - Published
- 2019
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54. Use of Quantitative Proteomic Analysis of CF and Non-CF Human Bronchial Epithelial (HBE) Cell Apical Secretome (AS) to Identify Changes in Innate Immunity of Lungs
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Mary C. Rose, K. Salka, Kristy J. Brown, A. Panigrahi, M.A. Arroyo Morr, Gustavo Nino, and Geovanny F. Perez
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Innate immune system ,medicine.anatomical_structure ,Cell ,Immunology ,medicine ,Biology - Published
- 2019
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55. Communication skills among children with spinal muscular atrophy type 1: A parent survey
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Lauren Carruthers, Stephen Chavez, Sally Evans, Geovanny F. Perez, Caitlin Brady, Meganne E Leach, Katherine Kundrat, Kathleen Smart, Diana Bharucha-Goebel, and Laura J. Ball
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Parents ,030506 rehabilitation ,Weakness ,medicine.medical_specialty ,Activities of daily living ,Physical Therapy, Sports Therapy and Rehabilitation ,Muscular Atrophy, Spinal ,03 medical and health sciences ,Communication Aids for Disabled ,0302 clinical medicine ,Quality of life (healthcare) ,Physical medicine and rehabilitation ,Medicine ,Humans ,Child ,Anarthria ,biology ,business.industry ,Communication ,Rehabilitation ,Flaccid dysarthria ,Spinal muscular atrophy ,biology.organism_classification ,medicine.disease ,Speech-generating device ,Augmentative and alternative communication ,Quality of Life ,medicine.symptom ,0305 other medical science ,business ,030217 neurology & neurosurgery - Abstract
Spinal muscular atrophy is one of the most common fatal autosomal recessive disorders. Children diagnosed with SMA Type 1 (SMAT1) demonstrate severe oral motor weakness and flaccid dysarthria progressing to complete anarthria. A review of literature illustrates that little has been described regarding augmentative and alternative communication (AAC) use among these children, although communication has a critical impact on quality of life and participation in daily activities. Responses to an investigator-developed parent survey were obtained to appraise communication skills and opportunities among children diagnosed with SMA1. Results illustrate parent perception of greater receptive than expressive language ability and highlight the benefits of implementing speech-generating devices (SGD). Barriers to SGD acquisition and implementation, including access and funding, are reported and described. Overall, families indicated that SGD increases quality of life and provides valued improvements through expanded functional communication.
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- 2019
56. Airway mir-155 responses are associated with TH1 cytokine polarization in young children with viral respiratory infections
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Maria Arroyo, Maria J. Gutierrez, Xilei Xuchen, Elizabeth Chorvinsky, Susana Gaviria, Karima Abutaleb, G.R. Nino, Kyle Salka, Jered Weinstock, and Geovanny F. Perez
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RNA viruses ,Male ,0301 basic medicine ,Pulmonology ,Rhinovirus ,Physiology ,Respiratory System ,Disease ,Pathology and Laboratory Medicine ,medicine.disease_cause ,Biochemistry ,Families ,0302 clinical medicine ,Immune Physiology ,Medicine and Health Sciences ,Respiratory system ,Children ,Immune Response ,Respiratory Tract Infections ,Innate Immune System ,Multidisciplinary ,Respiratory disease ,Respiratory Syncytial Viruses ,Nucleic acids ,medicine.anatomical_structure ,Medical Microbiology ,Viral Pathogens ,Viruses ,Cytokines ,Medicine ,Female ,Pathogens ,Research Article ,Science ,Immunology ,Respiratory Syncytial Virus Infections ,Microbiology ,miR-155 ,03 medical and health sciences ,Immune system ,Virology ,Genetics ,medicine ,Humans ,Non-coding RNA ,Microbial Pathogens ,Natural antisense transcripts ,business.industry ,Organisms ,Biology and Life Sciences ,Infant ,Molecular Development ,medicine.disease ,Gene regulation ,MicroRNAs ,030104 developmental biology ,Age Groups ,Immune System ,Respiratory Infections ,People and Places ,Paramyxoviruses ,Antiviral Immune Response ,RNA ,Population Groupings ,Respiratory Syncytial Virus ,Gene expression ,Airway ,business ,Viral Transmission and Infection ,Developmental Biology ,030215 immunology ,Respiratory tract - Abstract
Background MicroRNAs (miRs) control gene expression and the development of the immune system and antiviral responses. MiR-155 is an evolutionarily-conserved molecule consistently induced during viral infections in different cell systems. Notably, there is still an unresolved paradox for the role of miR-155 during viral respiratory infections. Despite being essential for host antiviral TH1 immunity, miR-155 may also contribute to respiratory disease by enhancing allergic TH2 responses and NFkB-mediated inflammation. The central goal of this study was to define how airway miR-155 production is related to TH1, TH2, and pro-inflammatory cytokine responses during naturally occurring viral respiratory infections in young children. Methods Normalized nasal airway levels of miR-155 and nasal protein levels of IFN-γ, TNF-α, IL-1β, IL-13, IL-4 were quantified in young children (≤2 years) hospitalized with viral respiratory infections and uninfected controls. These data were linked to individual characteristics and respiratory disease parameters. Results A total of 151 subjects were included. Increased miR-155 levels were observed in nasal samples from patients with rhinovirus, RSV and all respiratory viruses analyzed. High miR-155 levels were strongly associated with high IFN-γ production, increased airway TH1 cytokine polarization (IFN-γ/IL-4 ratios) and increased pro-inflammatory responses. High airway miR-155 levels were linked to decreased respiratory disease severity in individuals with high airway TH1 antiviral responses. Conclusions The airway secretion of miR-155 during viral respiratory infections in young children is associated with enhanced antiviral immunity (TH1 polarization). Further studies are needed to define additional physiological roles of miR-155 in the respiratory tract of human infants and young children during health and disease.
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- 2020
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57. Author Correction: Characterization of Sex-Based Dna Methylation Signatures in the Airways During Early Life
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Maria J. Gutierrez, Cesar L. Nino, Natalia Isaza, Geovanny F. Perez, Gustavo Nino, and Jose L. Gomez
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Multidisciplinary ,DNA methylation ,lcsh:R ,MEDLINE ,lcsh:Medicine ,lcsh:Q ,Computational biology ,Biology ,lcsh:Science ,Early life - Abstract
An amendment to this paper has been published and can be accessed via a link at the top of the paper.
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- 2020
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58. LungAIR: an automated technique to predict hospitalization due to LRTI using fused information
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Gustavo Nino, Awais Mansoor, Marius George Linguraru, and Geovanny F. Perez
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Pediatrics ,medicine.medical_specialty ,Quantitative imaging ,Respiratory tract infections ,medicine.diagnostic_test ,business.industry ,Sedation ,Computed tomography ,Air trapping ,Automated technique ,respiratory tract diseases ,Lung disease ,medicine ,medicine.symptom ,business ,Cause of death - Abstract
This paper presents a quantitative imaging method and software technology to predict the risk and assess the severity of respiratory diseases in premature babies by fusing information from multiple sources: non-invasive low-radiation chest X-ray (CXR) imaging and clinical parameters. Prematurity is the largest single cause of death in children under five in the world. Lower respiratory tract infections (LRTI) are the top cause of hospitalization and mortality in prematurity. However, there is no objective clinical marker to predict and prevent severe LRTI in the 15 million babies born prematurely every year worldwide. Traditionally, imaging biomarkers of lung disease from computed tomography have been successfully used in adults, but they entail heightened risks for children due to cumulative radiation and the need for sedation. The proposed technology is the first approach that uses low-radiation CXR imaging to predict hospitalization due to LRTI in prematurity. The method uses deep learning to quantify heterogeneous patterns (air trapping and irregular opacities) in the chest, which are combined with clinical parameters to predict the risk of LRTI. Our preliminary results obtained using a data obtained from ten premature subjects with LRTI showed high correlation between our imaging biomarkers and the rehospitalization of these subjects R2=0.98).
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- 2018
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59. Heterogeneity in the Diagnostic Criteria Physicians Use in Pediatric Asthma
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Anastassios C. Koumbourlis and Geovanny F. Perez
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Pulmonary and Respiratory Medicine ,medicine.medical_specialty ,Practice patterns ,business.industry ,MEDLINE ,Pediatrics ,Asthma ,Pulmonologists ,Family medicine ,Medicine ,Humans ,Practice Patterns, Physicians' ,business ,Pediatric asthma - Published
- 2018
60. Relationship of Pulmonary Outcomes, Microbiology, and Serum Antibiotic Concentrations in Cystic Fibrosis Patients
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Anastassios C. Koumbourlis, Caroline Jensen, James E. Bost, Iman Sami, Hani Fanous, Andrea Hahn, Geovanny F. Perez, John N. van den Anker, Hollis Chaney, and Stan G. Louie
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0301 basic medicine ,Spirometry ,medicine.medical_specialty ,medicine.drug_class ,030106 microbiology ,Antibiotics ,Clinical Investigations ,Ceftazidime ,Cystic fibrosis ,Meropenem ,Pulmonary function testing ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Internal medicine ,medicine ,Pharmacology (medical) ,Creatinine ,medicine.diagnostic_test ,business.industry ,medicine.disease ,030228 respiratory system ,chemistry ,Pediatrics, Perinatology and Child Health ,Cohort ,business ,medicine.drug - Abstract
OBJECTIVES To determine the frequency of subtherapeutic exposure to intravenously administered β-lactam antibiotics in a cohort of cystic fibrosis (CF) patients who were treated for a pulmonary exacerbation, and its impact on pulmonary function. METHODS Nineteen CF patients between the ages of 5 and 21 years treated at Children's National Health System for a pulmonary exacerbation were followed between March 2015 and August 2016 in a prospective, longitudinal study. Pharmacokinetic modeling and minimum inhibitory concentrations (MICs) of the involved pathogens were used to determine therapeutic or subtherapeutic β-lactam antibiotic exposure based on the time the antibiotic concentration was above the MIC. Clinical outcomes were measured by spirometry values. RESULTS The 19 participants were treated with a total of 29 courses of antibiotics. The most common β-lactam antibiotics used in a treatment course were ceftazidime (62%) and meropenem (45%). There was no difference in age, CF genotype, or creatinine clearance between the 9 participants (47%) who reached therapeutic concentrations versus the 10 (53%) who did not. Those who achieved sufficiently high antibiotic exposure had more significant improvement of their pulmonary function tests. CONCLUSIONS We found that sufficient antibiotic exposure during treatment of CF pulmonary exacerbations was associated with improved pulmonary function. Moreover, it was impossible to predict, solely from the dosing regimen used, which patients were going to reach therapeutic β-lactam antibiotic serum concentrations. This suggests that CF patients may benefit from closer monitoring of their β-lactam exposure and bacterial MIC for optimal clinical outcomes.
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- 2018
61. Antibiotic multidrug resistance in the cystic fibrosis airway microbiome is associated with decreased diversity
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Hani Fanous, Andrea Hahn, Iman Sami, Robert J. Freishtat, Aszia Burrell, Anastassios C. Koumbourlis, Keith A. Crandall, Hollis Chaney, and Geovanny F. Perez
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0301 basic medicine ,medicine.medical_specialty ,medicine.drug_class ,Bioinformatics ,030106 microbiology ,Antibiotics ,Cystic fibrosis ,Gastroenterology ,Microbiology ,Pulmonary function testing ,Computational biology ,03 medical and health sciences ,FEV1/FVC ratio ,Antibiotic resistance ,Internal medicine ,medicine ,Microbiome ,lcsh:Social sciences (General) ,lcsh:Science (General) ,Multidisciplinary ,business.industry ,medicine.disease ,Multiple drug resistance ,Sputum ,lcsh:H1-99 ,medicine.symptom ,business ,lcsh:Q1-390 - Abstract
Background Cystic fibrosis (CF) is associated with significant morbidity and early mortality due to recurrent acute and chronic lung infections. The chronic use of multiple antibiotics increases the possibility of multidrug resistance (MDR). Antibiotic susceptibility determined by culture-based techniques may not fully represent the resistance profile. The study objective was to detect additional antibiotic resistance using molecular methods and relate the presence of MDR to airway microbiome diversity and pulmonary function. Methods Bacterial DNA was extracted from sputum samples and amplified for the V4 region of the 16S rRNA gene. An qPCR array was used to detect antibiotic resistance genes. Clinical culture results and pulmonary function were also noted for each encounter. Results Six study participants contributed samples from 19 encounters. Those samples with MDR (n = 7) had significantly lower diversity measured by inverse Simpson's index than those without (n = 12) (2.193 ± 0.427 vs 6.023 ± 1.564, p = 0.035). Differential abundance showed that samples with MDR had more Streptococcus (p = 0.002) and Alcaligenaceae_unclassified (p = 0.002). Pulmonary function was also decreased when MDR was present (FEV1, 51 ± 22.9 vs 77 ± 26.7, p = 0.054; FVC, 64.5 ± 22.7 vs 91.6 ± 27.7, p = 0.047). Conclusions The presence of MDR within the CF airway microbiome was associated with decreased microbial diversity, the presence of Alcaligenes, and decreased pulmonary function.
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- 2018
62. Pulmonary inflammatory myofibroblastic tumour misdiagnosed as a round pneumonia
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Gustavo Nino, Geovanny F. Perez, Samira Naime, and Anjum Bandarkar
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Thorax ,Male ,medicine.medical_specialty ,Images In… ,Plasma Cell Granuloma, Pulmonary ,050801 communication & media studies ,Chest pain ,Lesion ,03 medical and health sciences ,0508 media and communications ,0302 clinical medicine ,medicine ,Palpitations ,Humans ,Diagnostic Errors ,Child ,Ultrasonography ,medicine.diagnostic_test ,business.industry ,05 social sciences ,Inflammatory myofibroblastic tumour ,Magnetic resonance imaging ,General Medicine ,Pneumonia ,medicine.disease ,Magnetic Resonance Imaging ,030220 oncology & carcinogenesis ,Radiology ,medicine.symptom ,Chest radiograph ,business ,Tomography, X-Ray Computed - Abstract
A 9-year-old male patient, previously healthy, presented with acute-onset chest pain. The pain was on the right lateral chest, 10/10 in severity and non-reproducible. The patient had 1-week history of cough that had been improving; no fever, weight loss, dyspnoea, palpitations or night sweats were reported. He had positive sick contacts. Examination was remarkable for slight decrease in breath sounds at the right lower lung field posteriorly. Initial chest radiograph showed a well-circumscribed opacity in the right lower lobe posteriorly with adjacent consolidation seen on the lateral view. The lesion appeared to be distinct from the cardiomediastinal silhouette (figure 1). Sonography was performed to characterise the nature of the lesion; however, it was difficult to visualise and only revealed mixed echotexture (figure 2). Contrast-enhanced CT scan of the thorax was then obtained. CT …
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- 2018
63. Rhinovirus‐induced airway cytokines and respiratory morbidity in severely premature children
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Carlos E. Rodriguez-Martinez, Mary C. Rose, Amisha Jain, Diego Preciado, Krishna Pancham, Shehlanoor Huseni, Geovanny F. Perez, and Gustavo Nino
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Male ,Pediatrics ,medicine.medical_specialty ,Rhinovirus ,Respiratory System ,Immunology ,Common Cold ,medicine.disease_cause ,Article ,Cohort Studies ,Th2 ,medicine ,Humans ,Immunology and Allergy ,Risk factor ,Bronchopulmonary Dysplasia ,Retrospective Studies ,Asthma ,Full Term ,Pediatric intensive care unit ,business.industry ,Infant, Newborn ,Retrospective cohort study ,medicine.disease ,Bronchopulmonary dysplasia ,Infant, Extremely Premature ,Pediatrics, Perinatology and Child Health ,Cytokines ,Female ,Th17 ,Prematurity ,Airway ,business ,Multiplex Polymerase Chain Reaction ,Infant, Premature - Abstract
Background Rhinovirus (RV ) has been linked to the pathogenesis of asthma. Prematurity is a risk factor for severe RV infection in early life, but is unknown if RV elicits enhanced pro‐asthmatic airway cytokine responses in premature infants. This study investigated whether young children born severely premature (
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- 2015
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64. The link between rhinitis and rapid-eye-movement sleep breathing disturbances in children with obstructive sleep apnea
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Shehlanoor Huseni, Maria J. Gutierrez, Carlos E. Rodriguez-Martinez, Krishna Pancham, Cesar L. Nino, Gustavo Nino, and Geovanny F. Perez
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Male ,Pediatrics ,medicine.medical_specialty ,Adolescent ,Apnea ,Polysomnography ,Polysomnogram ,Rapid eye movement sleep ,Sleep, REM ,Nasal congestion ,REM-related OSA ,OSA ,Sleep Apnea Syndromes ,stomatognathic system ,medicine ,Humans ,Immunology and Allergy ,Pediatric OSA ,Child ,Nose ,Retrospective Studies ,Rhinitis ,Sleep breathing ,Sleep Apnea, Obstructive ,medicine.diagnostic_test ,business.industry ,musculoskeletal, neural, and ocular physiology ,Sleep apnea ,Confounding Factors, Epidemiologic ,Articles ,General Medicine ,Immunoglobulin E ,medicine.disease ,nervous system diseases ,respiratory tract diseases ,Obstructive sleep apnea ,Cross-Sectional Studies ,medicine.anatomical_structure ,Otorhinolaryngology ,Child, Preschool ,REM ,Physical therapy ,Female ,medicine.symptom ,Sleep ,business ,psychological phenomena and processes - Abstract
Background Rhinitis and obstructive sleep apnea (OSA) often coexist during childhood. To delineate this clinical association, we examined OSA severity and polysomnogram (PSG) features in children with rhinitis and OSA. Given that rapid-eye-movement (REM) sleep is characterized by nasal congestion, we hypothesized that children with rhinitis have more REM-related breathing abnormalities. Methods We conducted a retrospective cross-sectional analysis of 145 children with PSG-diagnosed A. Outcomes included PSG parameters and obstructive apnea–hypopnea index (OAHI) during REM and non-REM. Linear multivariable models examined the joint effect of rhinitis and OSA parameters with control for potential confounders. Results Rhinitis was present in 43% of children with OSA (n = 63) but overall OAHI severity was unaffected by the presence of rhinitis. In contrast, OAHI during REM sleep in children with moderate-severe OSA was significantly increased subjects with rhinitis and OSA (44.1/hr; SE = 6.4) compared with those with OSA alone (28.2/hr; SE = 3.8). Conclusion Rhinitis is highly prevalent in children with OSA. Although OSA is not more severe in children with rhinitis, they do have a distinct OSA phenotype characterized by more REM-related OSA. Further research is needed to delineate the link between REM-sleep and the physiology of the nose during health and disease.
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- 2017
65. Nasopharyngeal microbiome in premature infants and stability during rhinovirus infection
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Anamaris M. Colberg-Poley, Natalia Isaza, Mary C. Rose, Marcos Pérez-Losada, Geovanny F. Perez, and Gustavo Nino
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0301 basic medicine ,Male ,Rhinovirus ,medicine.disease_cause ,General Biochemistry, Genetics and Molecular Biology ,Article ,Microbiology ,03 medical and health sciences ,0302 clinical medicine ,Immune system ,Nasopharynx ,Haemophilus ,medicine ,Humans ,030212 general & internal medicine ,Microbiome ,Risk factor ,Respiratory system ,Moraxella ,Principal Component Analysis ,Picornaviridae Infections ,biology ,Streptococcus ,Microbiota ,Infant, Newborn ,Infant ,General Medicine ,biology.organism_classification ,030104 developmental biology ,Immunology ,Female ,Seasons ,Infant, Premature - Abstract
Rationale The nasopharyngeal (NP) microbiota of newborns and infants plays a key role in modulating airway inflammation and respiratory symptoms during viral infections. Premature (PM) birth modifies the early NP environment and is a major risk factor for severe viral respiratory infections. However, it is currently unknown if the NP microbiota of PM infants is altered relative to full-term (FT) individuals. Objectives To characterize the NP microbiota differences in preterm and FT infants during rhinovirus (RV) infection. Methods We determined the NP microbiota of infants 6 months to ≤2 years of age born FT (n=6) or severely PMResults We observed significant differences in the NP bacterial community of PM versus FT. NP from PM infants had higher within-group dissimilarity (heterogeneity) relative to FT infants. Bacterial composition of NP samples from PM infants showed increased Proteobacteria and decreased in Firmicutes. There were also differences in the major taxonomic groups identified, including Streptococcus, Moraxella, and Haemophilus. Longitudinal data showed that these prematurity-related microbiota features persisted during RV infection. Conclusions PM is associated with NP microbiota changes beyond the neonatal stage. PM infants have an NP microbiota with high heterogeneity relative to FT infants. These prematurity-related microbiota features persisted during RV infection, suggesting that the NP microbiota of PM may play an important role in modulating airway inflammatory and immune responses in this vulnerable group.
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- 2017
66. 0790 Disparities in Severe Obstructive Sleep Apnea Diagnosis among Inner-city Children
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S Kilaikode, Geovanny F. Perez, Rosemary Megalaa, D Lewin, G.R. Nino, and Miriam Weiss
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Pediatrics ,medicine.medical_specialty ,School age child ,medicine.diagnostic_test ,business.industry ,Ethnic group ,Polysomnography ,medicine.disease ,Obstructive sleep apnea ,Inner city ,Physiology (medical) ,medicine ,Neurology (clinical) ,business ,Needle exchange programs - Published
- 2018
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67. 0749 Personalized PAP Approaches In Children Based On Clustering Of Usage Patterns
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S Kilaikode, R Megalaa, Miriam Weiss, D Garraway, Gustavo Nino, and Geovanny F. Perez
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business.industry ,medicine.medical_treatment ,medicine.disease ,Bioinformatics ,Receptor Desensitization ,Sleep in non-human animals ,Childhood obesity ,Obstructive sleep apnea ,Physiology (medical) ,medicine ,Neurology (clinical) ,Cluster analysis ,business ,Desensitization (medicine) - Published
- 2018
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68. 2573. Impact of Anaerobic Antibacterial Spectrum on Cystic Fibrosis Lung Microbiome Diversity and Pulmonary Function
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Hollis Chaney, Michael J. Bozzella, Anastassios C. Koumbourlis, Keith A. Crandall, Geovanny F. Perez, James E. Bost, Andrea Hahn, Iman Sami, and Robert J. Freishtat
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Lung microbiome ,Lung ,business.industry ,medicine.drug_class ,Antibiotics ,Disease progression ,medicine.disease ,Cystic fibrosis ,Microbiology ,Pulmonary function testing ,Abstracts ,Infectious Diseases ,medicine.anatomical_structure ,Oncology ,Poster Abstracts ,Medicine ,Anaerobic bacteria ,business ,Anaerobic exercise - Abstract
Background Next-generation sequencing has shown the cystic fibrosis (CF) lung microbiome to be a complex polymicrobial community. Anaerobic bacteria decrease in relative abundance with older age and disease progression, and may impact host inflammatory state. Persons with CF suffer from recurrent pulmonary exacerbations (PEs) that are treated with broad-spectrum antibiotics. Our objectives were to examine the effect of broad-spectrum (BS) vs narrow-spectrum (NS) anaerobic antibacterial treatment on bacterial diversity, and on pulmonary function recovery. Methods Pulmonary function tests (PFTs) and respiratory samples were collected as part of a prospective 18 month longitudinal study in CF patients at 4 time points, baseline (B), pulmonary exacerbation (E), end of exacerbation treatment (T), and follow-up (F). Treatment antibiotics were classified as broad or narrow based on anaerobic activity. 16S rRNA sequencing generated operational taxonomic units for analysis. Alpha diversity (relative abundance) was calculated via Shannon Index and Inverse Simpson formulas and β diversity (similarity in community composition) by Morisita-Horn (MH). Differences in diversity indices and PFTs were compared with regard to BS vs NS anaerobic activity, and statistical significance determined by GLS regression. Results Changes in alpha diversity for BS vs NS were not significantly different (P > 0.05) (Figures 1 and 2). Community composition measured by MH was consistently more similar for NS than BS (T-B: 0.66 vs. 0.45, P = 0.04; F-B: 0.75 vs. 0.47, P < 0.01) (Figure 3). Recovery of forced expiratory volume in 1 second (FEV1) from E to F was significantly higher in the NS group (25.4 vs. 21.0, P < 0.01) (Figure 4). Conclusion While antibiotic spectrum did not influence bacterial abundance, BS therapy led to higher changes in community composition from B and E onset following antibiotic administration compared with NS therapy. The differences in β diversity suggest BS therapy can have a lasting impact on community composition. As those receiving NS therapy had similar or better recovery of pulmonary function than those with BS, there is no indication that NS therapy leads to worse clinical outcomes. A limitation may be that children receiving BS therapy tended to have more severe disease. Disclosures All authors: No reported disclosures.
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- 2019
69. Delayed complication of tracheocutaneous fistula closure with severe compromising subcutaneous emphysema
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Pamela A. Mudd, Robert J. Lewis, Geovanny F. Perez, and Ari G. Mandler
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Male ,medicine.medical_specialty ,Cutaneous Fistula ,03 medical and health sciences ,Postoperative Complications ,0302 clinical medicine ,Intubation, Intratracheal ,medicine ,Humans ,Pneumomediastinum ,030223 otorhinolaryngology ,Device Removal ,Mediastinal Emphysema ,Tracheocutaneous fistula ,Tracheal Diseases ,Unexpected Outcome (Positive or Negative) Including Adverse Drug Reactions ,business.industry ,Paediatric intensive care ,General Medicine ,medicine.disease ,Complete resolution ,Subcutaneous Emphysema ,Secondary intention ,Surgery ,Trachea ,Treatment Outcome ,Child, Preschool ,030220 oncology & carcinogenesis ,Head and neck surgery ,medicine.symptom ,business ,Complication ,Subcutaneous emphysema - Abstract
We report a significant complication after tracheocutaneous fistula (TCF) excision with closure by secondary intention in a 4-year-old boy who had been tracheostomy dependent since infancy. He had a persistent 3 mm TCF one year after decannulation. On postoperative day 2 the patient developed profound subcutaneous emphysema and pneumomediastinum. He was extubated after 2 days and discharged from the hospital on postoperative day 7. At follow up he had complete resolution of subcutaneous emphysema and complete closure of the TCF. The main methods of TCF closure and management of subcutaneous emphysema are discussed along with the lessons learned from this case.
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- 2019
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70. Different next generation sequencing platforms produce different microbial profiles and diversity in cystic fibrosis sputum
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Marcos Pérez-Losada, Andrea Hahn, Mary C. Rose, Amit Sanyal, Anamaris M. Colberg-Poley, Joseph M. Campos, and Geovanny F. Perez
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0301 basic medicine ,Microbiology (medical) ,FASTQ format ,DNA, Bacterial ,Lung microbiome ,Cystic Fibrosis ,030106 microbiology ,mothur ,Microbiology ,DNA sequencing ,Article ,03 medical and health sciences ,RNA, Ribosomal, 16S ,Humans ,Microbiome ,Molecular Biology ,Lung ,Phylogeny ,Genetics ,biology ,Bacteria ,Base Sequence ,Microbiota ,Sputum ,Computational Biology ,High-Throughput Nucleotide Sequencing ,Biodiversity ,biology.organism_classification ,16S ribosomal RNA ,Classification ,030104 developmental biology ,Burkholderia ,Pyrosequencing ,Metagenome - Abstract
Background Cystic fibrosis (CF) is an autosomal recessive disease characterized by recurrent lung infections. Studies of the lung microbiome have shown an association between decreasing diversity and progressive disease. 454 pyrosequencing has frequently been used to study the lung microbiome in CF, but will no longer be supported. We sought to identify the benefits and drawbacks of using two state-of-the-art next generation sequencing (NGS) platforms, MiSeq and PacBio RSII, to characterize the CF lung microbiome. Each has its advantages and limitations. Methods Twelve samples of extracted bacterial DNA were sequenced on both MiSeq and PacBio NGS platforms. DNA was amplified for the V4 region of the 16S rRNA gene and libraries were sequenced on the MiSeq sequencing platform, while the full 16S rRNA gene was sequenced on the PacBio RSII sequencing platform. Raw FASTQ files generated by the MiSeq and PacBio platforms were processed in mothur v1.35.1. Results There was extreme discordance in alpha-diversity of the CF lung microbiome when using the two platforms. Because of its depth of coverage, sequencing of the 16S rRNA V4 gene region using MiSeq allowed for the observation of many more operational taxonomic units (OTUs) and higher Chao1 and Shannon indices than the PacBio RSII. Interestingly, several patients in our cohort had Escherichia , an unusual pathogen in CF. Also, likely because of its coverage of the complete 16S rRNA gene, only PacBio RSII was able to identify Burkholderia , an important CF pathogen. Conclusion When comparing microbiome diversity in clinical samples from CF patients using 16S sequences, MiSeq and PacBio NGS platforms may generate different results in microbial community composition and structure. It may be necessary to use different platforms when trying to correctly identify dominant pathogens versus measuring alpha-diversity estimates, and it would be important to use the same platform for comparisons to minimize errors in interpretation.
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- 2016
71. Airway Secretory microRNAome Changes during Rhinovirus Infection in Early Childhood
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Krishna Pancham, Sarah C. Ferrante, Gustavo Nino, Diego Preciado, Mamta Giri, Mary C. Rose, Robert J. Freishtat, Dinesh K. Pillai, Geovanny F. Perez, Stéphanie Val, Jose L. Gomez, and Maria J. Gutierrez
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0301 basic medicine ,Pathology ,Viral Diseases ,Pulmonology ,Rhinovirus ,Physiology ,lcsh:Medicine ,medicine.disease_cause ,Biochemistry ,Families ,Medicine and Health Sciences ,Respiratory system ,lcsh:Science ,Immune Response ,Children ,Respiratory Tract Infections ,education.field_of_study ,Multidisciplinary ,Genomics ,respiratory system ,3. Good health ,Up-Regulation ,Nucleic acids ,Infectious Diseases ,Child, Preschool ,Research Article ,medicine.medical_specialty ,Population ,Immunology ,Biology ,Rhinovirus Infection ,03 medical and health sciences ,Immune system ,medicine ,Genetics ,Humans ,Secretion ,education ,Non-coding RNA ,Innate immune system ,Picornaviridae Infections ,lcsh:R ,Biology and Life Sciences ,Infant ,respiratory tract diseases ,Gene regulation ,MicroRNAs ,030104 developmental biology ,Gene Expression Regulation ,Age Groups ,Respiratory Infections ,People and Places ,Respiratory epithelium ,RNA ,lcsh:Q ,Population Groupings ,Gene expression ,Airway ,Physiological Processes - Abstract
Background Innate immune responses are fine-tuned by small noncoding RNA molecules termed microRNAs (miRs) that modify gene expression in response to the environment. During acute infections, miRs can be secreted in extracellular vesicles (EV) to facilitate cell-to-cell genetic communication. The purpose of this study was to characterize the baseline population of miRs secreted in EVs in the airways of young children (airway secretory microRNAome) and examine the changes during rhinovirus (RV) infection, the most common cause of asthma exacerbations and the most important early risk factor for the development of asthma beyond childhood. Methods Nasal airway secretions were obtained from children (≤3 yrs. old) during PCR-confirmed RV infections (n = 10) and age-matched controls (n = 10). Nasal EVs were isolated with polymer-based precipitation and global miR profiles generated using NanoString microarrays. We validated our in vivo airway secretory miR data in an in vitro airway epithelium model using apical secretions from primary human bronchial epithelial cells (HBEC) differentiated at air-liquid interface (ALI). Bioinformatics tools were used to determine the unified (nasal and bronchial) signature airway secretory miRNAome and changes during RV infection in children. Results Multiscale analysis identified four signature miRs comprising the baseline airway secretory miRNAome: hsa-miR-630, hsa-miR-302d-3p, hsa- miR-320e, hsa-miR-612. We identified hsa-miR-155 as the main change in the baseline miRNAome during RV infection in young children. We investigated the potential biological relevance of the airway secretion of hsa-mir-155 using in silico models derived from gene datasets of experimental in vivo human RV infection. These analyses confirmed that hsa-miR-155 targetome is an overrepresented pathway in the upper airways of individuals infected with RV. Conclusions Comparative analysis of the airway secretory microRNAome in children indicates that RV infection is associated with airway secretion of EVs containing miR-155, which is predicted in silico to regulate antiviral immunity. Further characterization of the airway secretory microRNAome during health and disease may lead to completely new strategies to treat and monitor respiratory conditions in all ages.
- Published
- 2016
72. Premature Infants Rehospitalized because of an Apparent Life-Threatening Event Had Distinctive Autonomic Developmental Trajectories
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Carl E. Hunt, Robert McCarter, Geovanny F. Perez, Ramaswamy Govindan, An N. Massaro, Tareq Al-Shargabi, Gustavo Nino, Adre J. du Plessis, and Marina Metzler
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Pulmonary and Respiratory Medicine ,Male ,Pediatrics ,medicine.medical_specialty ,Apnea ,Critical Care and Intensive Care Medicine ,Autonomic Nervous System ,Patient Readmission ,03 medical and health sciences ,0302 clinical medicine ,030225 pediatrics ,Correspondence ,medicine ,Humans ,Hypoxia ,Retrospective Studies ,business.industry ,Infant, Newborn ,Retrospective cohort study ,Hypoxia (medical) ,Infant newborn ,Autonomic nervous system ,Female ,medicine.symptom ,business ,030217 neurology & neurosurgery ,Infant, Premature - Published
- 2016
73. Automatic tissue characterization of air trapping in chest radiographs using deep neural networks
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Geovanny F. Perez, Marius George Linguraru, Gustavo Nino, and Awais Mansoor
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medicine.medical_specialty ,Radiography ,Pulmonary disease ,Computed tomography ,Air trapping ,Article ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Image Processing, Computer-Assisted ,Humans ,Medicine ,Diagnosis, Computer-Assisted ,Lung ,medicine.diagnostic_test ,business.industry ,Air ,Deep learning ,Tissue characterization ,Autoencoder ,030228 respiratory system ,Virus Diseases ,Deep neural networks ,Radiography, Thoracic ,Neural Networks, Computer ,Radiology ,Artificial intelligence ,medicine.symptom ,business - Abstract
Significant progress has been made in recent years for computer-aided diagnosis of abnormal pulmonary textures from computed tomography (CT) images. Similar initiatives in chest radiographs (CXR), the common modality for pulmonary diagnosis, are much less developed. CXR are fast, cost effective and low-radiation solution to diagnosis over CT. However, the subtlety of textures in CXR makes them hard to discern even by trained eye. We explore the performance of deep learning abnormal tissue characterization from CXR. Prior studies have used CT imaging to characterize air trapping in subjects with pulmonary disease; however, the use of CT in children is not recommended mainly due to concerns pertaining to radiation dosage. In this work, we present a stacked autoencoder (SAE) deep learning architecture for automated tissue characterization of air-trapping from CXR. To our best knowledge this is the first study applying deep learning framework for the specific problem on 51 CXRs, an F-score of ≈ 76.5% and a strong correlation with the expert visual scoring (R=0.93, p =; 0.01) demonstrate the potential of the proposed method to characterization of air trapping.
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- 2016
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74. Severity quantification of pediatric viral respiratory illnesses in chest X-ray images
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Awais Mansoor, Marius George Linguraru, Gustavo Nino, Geovanny F. Perez, Abia Khan, Kazunori Okada, Marzieh Golbaz, and Krishna Pancham
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medicine.medical_specialty ,Pediatrics ,Imaging biomarker ,Respiratory Tract Diseases ,Article ,Lung segmentation ,Active shape model ,Image Processing, Computer-Assisted ,Medicine ,Humans ,Clinical significance ,Intensive care medicine ,Child ,business.industry ,Infant, Newborn ,Infant ,Pulmonologist ,Models, Theoretical ,Graph cut segmentation ,Virus Diseases ,Child, Preschool ,X ray image ,Radiography, Thoracic ,business ,Algorithms ,Pediatric population - Abstract
Accurate assessment of severity of viral respiratory illnesses (VRIs) allows early interventions to prevent morbidity and mortality in young children. This paper proposes a novel imaging biomarker framework with chest X-ray image for assessing VRI's severity in infants, developed specifically to meet the distinct challenges for pediatric population. The proposed framework integrates three novel technical contributions: a) lung segmentation using weighted partitioned active shape model, b) obtrusive object removal using graph cut segmentation with asymmetry constraint, and c) severity quantification using information-theoretic heterogeneity measures. This paper presents our pilot experimental results with a dataset of 148 images and the ground-truth severity scores given by a board-certified pediatric pulmonologist, demonstrating the effectiveness and clinical relevance of the presented framework.
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- 2016
75. Rhinovirus-induced airway disease : A model to understand the antiviral and Th2 epithelial immune dysregulation in childhood asthma
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Carlos E. Rodriguez-Martinez, Geovanny F. Perez, and Gustavo Nino
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medicine.medical_specialty ,Thymic stromal lymphopoietin ,Rhinovirus ,Disease ,medicine.disease_cause ,Antiviral Agents ,Models, Biological ,Article ,Epithelium ,General Biochemistry, Genetics and Molecular Biology ,Th2 Cells ,Medical microbiology ,medicine ,Humans ,Child ,Asthma ,Innate immune system ,business.industry ,General Medicine ,Immune dysregulation ,Respiration Disorders ,medicine.disease ,Immunology ,Interferons ,Microbiome ,business ,Airway ,Innate antiviral immunity - Abstract
Rhinovirus (RV) infections account for most asthma exacerbations among children and adults, yet the fundamental mechanism responsible for why asthmatics are more susceptible to RV than otherwise healthy individuals remains largely unknown. Nonetheless, the use of models to understand the mechanisms of RV-induced airway disease in asthma has dramatically expanded our knowledge about the cellular and molecular pathogenesis of the disease. For instance, ground-breaking studies have recently established that the susceptibility to RV in asthmatic subjects is associated with a dysfunctional airway epithelial inflammatory response generated after innate recognition of viral-related molecules, such as double-stranded RNA. This review summarizes the novel cardinal features of the asthmatic condition identified in the past few years through translational and experimental RV-based approaches. Specifically, we discuss the evidence demonstrating the presence of an abnormal innate antiviral immunity (airway epithelial secretion of types I and III interferons), exaggerated production of the master Th2 molecule thymic stromal lymphopoietin, and altered antimicrobial host defense in the airways of asthmatic individuals with acute RV infection.
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- 2015
76. Premature infants have impaired airway antiviral IFNγ responses to human metapneumovirus compared to respiratory syncytial virus
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Geovanny F. Perez, Mary C. Rose, Bassem Kurdi, Diego Preciado, Shehlanoor Huseni, Amisha Jain, Carlos E. Rodriguez-Martinez, Gustavo Nino, and Krishna Pancham
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Male ,viruses ,Medicine ,Interferon gamma ,Metapneumovirus ,Prospective Studies ,Respiratory system ,Chemokine CCL5 ,Lung ,Paramyxoviridae Infections ,biology ,virus diseases ,respiratory system ,Interleukin-10 ,Respiratory Syncytial Viruses ,Up-Regulation ,Interleukin 10 ,medicine.anatomical_structure ,Child, Preschool ,Host-Pathogen Interactions ,Cross-sectional studies ,Female ,Infant, Premature ,medicine.drug ,Gestational Age ,Respiratory Syncytial Virus Infections ,Virus ,Article ,Interferon-gamma ,Th2 Cells ,stomatognathic system ,Human metapneumovirus ,Humans ,business.industry ,Infant ,Gestational age ,Th1 Cells ,biology.organism_classification ,Virology ,respiratory tract diseases ,Cross-Sectional Studies ,Pediatrics, Perinatology and Child Health ,Immunology ,DNA, Viral ,Th17 Cells ,Interleukin-4 ,business ,Airway ,Prospective studies - Abstract
Background: It is unknown why human metapneumovirus (HMPV) and respiratory syncytial virus (RSV) cause severe respiratory infection in children, particularly in premature infants. Our aim was to investigate if there are defective airway antiviral responses to these viruses in young children with history of prematurity. Methods: Nasal airway secretions were collected from 140 children ≤3 y old without detectable virus (n = 80) or with PCR-confirmed HMPV or RSV infection (n = 60). Nasal protein levels of IFNγ, CCL5/RANTES, IL-10, IL-4, and IL-17 were determined using a multiplex magnetic bead immunoassay. Results: Full-term children with HMPV and RSV infection had increased levels of nasal airway IFNγ, CCL5, and IL-10 along with an elevation in Th1 (IFNγ)/Th2 (IL-4) ratios, which is expected during antiviral responses. In contrast, HMPV-infected premature children (< 32 wk gestation) did not exhibit increased Th1/Th2 ratios or elevated nasal airway secretion of IFNγ, CCL5, and IL-10 relative to uninfected controls. Conclusion: Our study is the first to demonstrate that premature infants have defective IFNγ, CCL5/RANTES, and IL-10 airway responses during HMPV infection and provides novel insights about the potential reason why HMPV causes severe respiratory disease in children with history of prematurity.
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- 2014
77. Rhinovirus infection in young children is associated with elevated airway TSLP levels
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Diego Preciado, Mary C. Rose, Anamaris M. Colberg-Poley, Krishna Pancham, Robert J. Freishtat, Geovanny F. Perez, Eric P. Hoffman, Gustavo Nino, and Shehlanoor Huseni
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Pulmonary and Respiratory Medicine ,Thymic stromal lymphopoietin ,Rhinovirus ,medicine.medical_treatment ,medicine.disease_cause ,Article ,Immune system ,Thymic Stromal Lymphopoietin ,Immunity ,medicine ,Humans ,Antigen-presenting cell ,Asthma ,Innate immune system ,Picornaviridae Infections ,business.industry ,Infant ,respiratory system ,medicine.disease ,Nasal Lavage Fluid ,Virology ,respiratory tract diseases ,Cytokine ,Cross-Sectional Studies ,Immunology ,Cytokines ,business - Abstract
To the Editor: Rhinovirus wheezing illnesses during early childhood are strongly linked with development of asthma later in life [1]. Indeed, rhinovirus infection in the first 3 years of life is associated with an almost 10-fold increase in risk for asthma at age 6 years [1]. The exact mechanism by which rhinovirus elicits a pro-asthmatic propensity in young children is largely unknown, but is purportedly related to a viral-induced T-helper cell (Th)2 airway inflammatory response [2]. Interestingly, the discovery of interactions between epithelial innate immunity and adaptive allergic responses has unveiled new potential links between rhinovirus and asthma. Of particular interest is the epithelial-derived cytokine thymic stromal lymphopoietin (TSLP), which is considered a “master Th2 cytokine” because it primes the differentiation of naive T0 cells into Th2 lymphocytes via activation of antigen presenting cells [3]. TSLP is induced by rhinovirus infection or by exposure to double stranded (ds)RNA (viral surrogate) in the lungs of allergic mice [4], and in human bronchial epithelial cells (HBEC) [5]. Together, these data suggest that TSLP may be the missing link between innate antiviral epithelial immunity and the Th2 immune response characteristic of asthma. This cross-sectional preliminary study aimed to investigate whether rhinovirus infections that occur naturally during the first 3 years of life are associated with elevated airway TSLP levels and enhanced Th2 responses, which may potentially facilitate the establishment of rhinovirus-induced pro-asthmatic changes during early childhood. We measured nasal airway TSLP, Th2 cytokines and antiviral responses in nasal washes obtained from newborns, infants and toddlers (≤3 years) with PCR-confirmed acute …
- Published
- 2014
78. Directional secretory response of double stranded RNA-induced thymic stromal lymphopoetin (TSLP) and CCL11/eotaxin-1 in human asthmatic airways
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Humaira Mubeen, Shehlanoor Huseni, Krishna Pancham, Stephen Eng, Dinesh K. Pillai, Anamaris M. Colberg-Poley, Justin Wang, Mary C. Rose, Geovanny F. Perez, Aleeza Abbasi, and Gustavo Nino
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Eotaxin ,Chemokine ,Pulmonology ,Rhinovirus ,medicine.medical_treatment ,Respiratory System ,lcsh:Medicine ,Pediatrics ,Epithelium ,0302 clinical medicine ,Animal Cells ,Medicine and Health Sciences ,Child ,lcsh:Science ,CCL11 ,0303 health sciences ,Multidisciplinary ,respiratory system ,Cell Culture Analysis ,3. Good health ,medicine.anatomical_structure ,Cytokine ,Child, Preschool ,Cytokines ,Immunotherapy ,Biological Cultures ,Anatomy ,Cellular Types ,Research Article ,Chemokine CCL11 ,Stromal cell ,Adolescent ,Immunology ,Pediatric Pulmonology ,Biology ,Research and Analysis Methods ,Cell Line ,03 medical and health sciences ,Thymic Stromal Lymphopoietin ,medicine ,Humans ,Secretion ,RNA, Double-Stranded ,030304 developmental biology ,Chemokine CCL22 ,Tumor Necrosis Factor-alpha ,Interleukin-8 ,lcsh:R ,Biology and Life Sciences ,Epithelial Cells ,Cell Biology ,Asthma ,respiratory tract diseases ,Nasal Mucosa ,Biological Tissue ,Allergy Immunotherapy ,030228 respiratory system ,Case-Control Studies ,biology.protein ,Respiratory epithelium ,Clinical Immunology ,lcsh:Q ,Chemokine CCL17 ,Lungs - Abstract
Background Thymic stromal lymphoproetin (TSLP) is a cytokine secreted by the airway epithelium in response to respiratory viruses and it is known to promote allergic Th2 responses in asthma. This study investigated whether virally-induced secretion of TSLP is directional in nature (apical vs. basolateral) and/or if there are TSLP-mediated effects occurring at both sides of the bronchial epithelial barrier in the asthmatic state. Methods Primary human bronchial epithelial cells (HBEC) from control (n = 3) and asthmatic (n = 3) donors were differentiated into polarized respiratory tract epithelium under air-liquid interface (ALI) conditions and treated apically with dsRNA (viral surrogate) or TSLP. Sub-epithelial effects of TSLP were examined in human airway smooth muscle cells (HASMC) from normal (n = 3) and asthmatic (n = 3) donors. Clinical experiments examined nasal airway secretions obtained from asthmatic children during naturally occurring rhinovirus-induced exacerbations (n = 20) vs. non-asthmatic uninfected controls (n = 20). Protein levels of TSLP, CCL11/eotaxin-1, CCL17/TARC, CCL22/MDC, TNF-α and CXCL8 were determined with a multiplex magnetic bead assay. Results Our data demonstrate that: 1) Asthmatic HBEC exhibit an exaggerated apical, but not basal, secretion of TSLP after dsRNA exposure; 2) TSLP exposure induces unidirectional (apical) secretion of CCL11/eotaxin-1 in asthmatic HBEC and enhanced CCL11/eotaxin-1 secretion in asthmatic HASMC; 3) Rhinovirus-induced asthma exacerbations in children are associated with in vivo airway secretion of TSLP and CCL11/eotaxin-1. Conclusions There are virally-induced TSLP-driven secretory immune responses at both sides of the bronchial epithelial barrier characterized by enhanced CCL11/eotaxin-1 secretion in asthmatic airways. These results suggest a new model of TSLP-mediated eosinophilic responses in the asthmatic airway during viral-induced exacerbations.
- Published
- 2014
79. Oximetry Signal Processing Identifies REM Sleep-Related Vulnerability Trait in Asthmatic Children
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Khrisna Pancham, Geovanny F. Perez, Carlos E. Rodriguez-Martinez, Shehlanoor Huseni, Gustavo Nino, Cesar L. Nino, and Maria J. Gutierrez
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Pediatrics ,medicine.medical_specialty ,Multivariate analysis ,Article Subject ,lcsh:RC435-571 ,Cognitive Neuroscience ,Non-rapid eye movement sleep ,03 medical and health sciences ,Behavioral Neuroscience ,0302 clinical medicine ,Bayesian multivariate linear regression ,Statistical significance ,lcsh:Psychiatry ,mental disorders ,Medicine ,Asthma ,business.industry ,musculoskeletal, neural, and ocular physiology ,Confounding ,medicine.disease ,Sleep in non-human animals ,respiratory tract diseases ,Psychiatry and Mental health ,Clinical Psychology ,030228 respiratory system ,Clinical Study ,Trait ,business ,030217 neurology & neurosurgery ,psychological phenomena and processes - Abstract
Rationale. The sleep-related factors that modulate the nocturnal worsening of asthma in children are poorly understood. This study addressed the hypothesis that asthmatic children have a REM sleep-related vulnerability trait that is independent of OSA.Methods. We conducted a retrospective cross-sectional analysis of pulse-oximetry signals obtained during REM and NREM sleep in control and asthmatic children (n=134). Asthma classification was based on preestablished clinical criteria. Multivariate linear regression model was built to control for potential confounders (significance levelP≤0.05).Results. Our data demonstrated that (1) baseline nocturnal respiratory parameters were not significantly different in asthmatic versus control children, (2) the maximal % of SaO2desaturation during REM, but not during NREM, was significantly higher in asthmatic children, and (3) multivariate analysis revealed that the association between asthma and REM-related maximal % SaO2desaturation was independent of demographic variables.Conclusion. These results demonstrate that children with asthma have a REM-related vulnerability trait that impacts oxygenation independently of OSA. Further research is needed to delineate the REM sleep neurobiological mechanisms that modulate the phenotypical expression of nocturnal asthma in children.
- Published
- 2013
80. Characterization of tree species in silvopastoral systems in the mountain region of Tabasco, Mexico
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H. Losada, F. Pérez-Gil, Geovanny F. Perez, J. Nahed, M. R. Mosquera-Losada, M. Maldonado, J. McAdam, D. Grande, and A. Rigueiro-Rodríguez
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Geography ,Agroforestry ,Sustainability ,Forestry ,Tree species ,Woody plant - Published
- 2005
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81. 034 Myeloperoxidase mediates oxidation of surfactant protein-D abrogating its biological activities
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Abderrazzaq Belaaouaj, Sadis Matalon, Erika C. Crouch, Scott Bahr, Barbara McDonald, Tim O. Hirche, and Geovanny F. Perez
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Pulmonary and Respiratory Medicine ,Innate immune system ,biology ,Chemistry ,Mutant ,In vitro toxicology ,Surfactant protein D ,Inflammation ,Oxidative phosphorylation ,Biochemistry ,Myeloperoxidase ,biology.protein ,medicine ,medicine.symptom ,Mannan - Abstract
Introduction Surfactant protein D (SP-D) is expressed in the lung and plays important roles in innate immunity including defense against inhaled pathogens. While the levels of SP-D have been shown to decrease in acutely injured lung, little is known about the mechanism(s) of its inactivation and clearance. A hall-mark of acute inflammation is the recruitment and activation of polymorphonuclear neutrophils (PMNs). Activated PMNs employ different pathways to generate toxic oxidants with deleterious effect on host tissues. In the myeloperoxidase (MPO) pathway, MPO employs hydrogen peroxide (H2O2) and chloride to generate HOC1, a highly reactive and toxic oxidant. These observations prompted us to hypothesize that MPO-derived oxidants can alter the structure and function of SP-D. Experimental design and results To test our hypothesis, we exposed purified human or rat SP-D to HOC1 or MPO System (MPO+H2O2+Chloride ions). Next, the activity of treated SP-D was examined using two well-characterized in vitro assays: bacterial agglutination and binding to solid phase yeast mannan Both HOC1 and MPO System abrogated SP-D's ability to aggregate bacteria and decreased its ability to bind to mannan. Additional studies using mutant SP-D suggest oxidative inactivation of SP-D C-type lectin region, the carbohydrate recognition domain (CRD). In contrast to HOC1, H2O2 had no effect on SP-D function at ail concentrations examined. Moreover, electrophoretic analysis of HOCl-treated SP-D demonstrated high molecular weight complexes by comparison to control SP-D. Conclusion Our data suggest that MPO-derived oxidants such as HOC1 target SP-D within its CRD region and broadly interferes with its function(s). Studies are underway to investigate the mechanism(s) of oxidative inactivation of SP-D.
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- 2005
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82. Caracterización de la infección pulmonar por citomegalovirus en niños sin virus de inmunodeficiencia humana
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Sonia M. Restrepo- Gualteros, Lina E. Jaramillo- Barberi, Mónica González- Santos, Carlos E. Rodríguez- Martínez, Geovanny F. Pérez, María J. Gutiérrez, and Gustavo Niño
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Medicine ,Medicine (General) ,R5-920 - Abstract
INTRODUCCIÓN El citomegalovirus (CMV) es un patógeno frecuente en los hospederos inmunocomprometidos, en los que puede causar neumonía grave. Existen pocas descripciones de la neumonía por CMV en pacientes inmunocomprometidos y aún menos en inmunocompetentes tanto adultos como niños. Dada la importancia que reviste establecer las pautas diagnósticas tempranas, por su gravedad, se hace necesario documentar el comportamiento clínico, paraclínico y radiológico, y los antecedentes de los pacientes pediátricos con este diagnóstico. OBJETIVOS Describir las características clínicas, paraclínicas y radiológicas de una serie de pacientes pediátricos con diagnóstico de neumonía por CMV atendidos en el Hospital de la Misericordia en el período comprendido entre enero de 2010 y diciembre de 2013. MÉTODOS Se revisaron los registros clínicos, radiológicos y de laboratorio de los niños con neumonía por CMV. RESULTADOS En esta serie de casos pediátricos caracterizamos la infección pulmonar por CMV en 15 niños no infectados por el VIH (mediana de edad de 3 años), con el uso de modalidades de diagnóstico molecular y de imagen, en combinación con los signos y síntomas respiratorios. Los hallazgos clínicos y de laboratorio más importantes incluyeron tos (100%), hipoxemia (100%), estertores (100%) y aumento del esfuerzo respiratorio (93%). Todos los pacientes tenían imágenes anormales del parenquima pulmonar; en 80% de los casos estas correspondían a opacidad en vidrio esmerilado/consolidación. Se detectó CMV en el pulmón, por reacción en cadena de la polimerasa en el lavado broncoalveolar o por histología/ inmunohistoquímica en biopsias de pulmón. El CMV causó insuficiencia respiratoria en 47% de los niños infectados y la tasa de mortalidad global fue del 13,3%. CONCLUSIÓN La neumonía por CMV es una enfermedad potencialmente fatal en los niños no infectados por el VIH por lo que se requiere un alto índice de sospecha. Patrones clínicos y radiológicos comunes como la hipoxemia, los estertores y las opacidades pulmonares en vidrio esmerilado podrían permitir la identificación temprana de la infección pulmonar por CMV en la población pediátrica, lo que puede conducir a la pronta iniciación de la terapia antiviral y a mejores resultados clínicos.
- Published
- 2015
83. Airway Secretory microRNAome Changes during Rhinovirus Infection in Early Childhood.
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Maria J Gutierrez, Jose L Gomez, Geovanny F Perez, Krishna Pancham, Stephanie Val, Dinesh K Pillai, Mamta Giri, Sarah Ferrante, Robert Freishtat, Mary C Rose, Diego Preciado, and Gustavo Nino
- Subjects
Medicine ,Science - Abstract
BACKGROUND:Innate immune responses are fine-tuned by small noncoding RNA molecules termed microRNAs (miRs) that modify gene expression in response to the environment. During acute infections, miRs can be secreted in extracellular vesicles (EV) to facilitate cell-to-cell genetic communication. The purpose of this study was to characterize the baseline population of miRs secreted in EVs in the airways of young children (airway secretory microRNAome) and examine the changes during rhinovirus (RV) infection, the most common cause of asthma exacerbations and the most important early risk factor for the development of asthma beyond childhood. METHODS:Nasal airway secretions were obtained from children (≤3 yrs. old) during PCR-confirmed RV infections (n = 10) and age-matched controls (n = 10). Nasal EVs were isolated with polymer-based precipitation and global miR profiles generated using NanoString microarrays. We validated our in vivo airway secretory miR data in an in vitro airway epithelium model using apical secretions from primary human bronchial epithelial cells (HBEC) differentiated at air-liquid interface (ALI). Bioinformatics tools were used to determine the unified (nasal and bronchial) signature airway secretory miRNAome and changes during RV infection in children. RESULTS:Multiscale analysis identified four signature miRs comprising the baseline airway secretory miRNAome: hsa-miR-630, hsa-miR-302d-3p, hsa- miR-320e, hsa-miR-612. We identified hsa-miR-155 as the main change in the baseline miRNAome during RV infection in young children. We investigated the potential biological relevance of the airway secretion of hsa-mir-155 using in silico models derived from gene datasets of experimental in vivo human RV infection. These analyses confirmed that hsa-miR-155 targetome is an overrepresented pathway in the upper airways of individuals infected with RV. CONCLUSIONS:Comparative analysis of the airway secretory microRNAome in children indicates that RV infection is associated with airway secretion of EVs containing miR-155, which is predicted in silico to regulate antiviral immunity. Further characterization of the airway secretory microRNAome during health and disease may lead to completely new strategies to treat and monitor respiratory conditions in all ages.
- Published
- 2016
- Full Text
- View/download PDF
84. Directional secretory response of double stranded RNA-induced thymic stromal lymphopoetin (TSLP) and CCL11/eotaxin-1 in human asthmatic airways.
- Author
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Gustavo Nino, Shehlanoor Huseni, Geovanny F Perez, Krishna Pancham, Humaira Mubeen, Aleeza Abbasi, Justin Wang, Stephen Eng, Anamaris M Colberg-Poley, Dinesh K Pillai, and Mary C Rose
- Subjects
Medicine ,Science - Abstract
BACKGROUND:Thymic stromal lymphoproetin (TSLP) is a cytokine secreted by the airway epithelium in response to respiratory viruses and it is known to promote allergic Th2 responses in asthma. This study investigated whether virally-induced secretion of TSLP is directional in nature (apical vs. basolateral) and/or if there are TSLP-mediated effects occurring at both sides of the bronchial epithelial barrier in the asthmatic state. METHODS:Primary human bronchial epithelial cells (HBEC) from control (n = 3) and asthmatic (n = 3) donors were differentiated into polarized respiratory tract epithelium under air-liquid interface (ALI) conditions and treated apically with dsRNA (viral surrogate) or TSLP. Sub-epithelial effects of TSLP were examined in human airway smooth muscle cells (HASMC) from normal (n = 3) and asthmatic (n = 3) donors. Clinical experiments examined nasal airway secretions obtained from asthmatic children during naturally occurring rhinovirus-induced exacerbations (n = 20) vs. non-asthmatic uninfected controls (n = 20). Protein levels of TSLP, CCL11/eotaxin-1, CCL17/TARC, CCL22/MDC, TNF-α and CXCL8 were determined with a multiplex magnetic bead assay. RESULTS:Our data demonstrate that: 1) Asthmatic HBEC exhibit an exaggerated apical, but not basal, secretion of TSLP after dsRNA exposure; 2) TSLP exposure induces unidirectional (apical) secretion of CCL11/eotaxin-1 in asthmatic HBEC and enhanced CCL11/eotaxin-1 secretion in asthmatic HASMC; 3) Rhinovirus-induced asthma exacerbations in children are associated with in vivo airway secretion of TSLP and CCL11/eotaxin-1. CONCLUSIONS:There are virally-induced TSLP-driven secretory immune responses at both sides of the bronchial epithelial barrier characterized by enhanced CCL11/eotaxin-1 secretion in asthmatic airways. These results suggest a new model of TSLP-mediated eosinophilic responses in the asthmatic airway during viral-induced exacerbations.
- Published
- 2014
- Full Text
- View/download PDF
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