Search

Your search keyword '"Geng, Chunyu"' showing total 60 results
Start Over Author "Geng, Chunyu"
60 results on '"Geng, Chunyu"'

52. Draft genome sequence of the Tibetan antelope

Author

Ge, Ri-Li, Cai, Qingle, Shen, Yong-Yi, San, A., Ma, Lan, Zhang, Yong, Yi, Xin, Chen, Yan, Yang, Lingfeng, Huang, Ying, He, Rongjun, Hui, Yuanyuan, Hao, Meirong, Li, Yue, Wang, Bo, Ou, Xiaohua, Xu, Jiaohui, Zhang, Yongfen, Wu, Kui, Geng, Chunyu, Zhou, Weiping, Zhou, Taicheng, Irwin, David M., Yang, Yingzhong, Ying, Liu, Bao, Haihua, Kim, Jaebum, Larkin, Denis M., Ma, Jian, Lewin, Harris A., Xing, Jinchuan, Platt, Roy N., II, Ray, David A., Auvil, Loretta, Capitanu, Boris, Zhang, Xiufeng, Zhang, Guojie, Murphy, Robert W., Wang, Jun, Zhang, Ya-Ping, Wang, Jian, Ge, Ri-Li, Cai, Qingle, Shen, Yong-Yi, San, A., Ma, Lan, Zhang, Yong, Yi, Xin, Chen, Yan, Yang, Lingfeng, Huang, Ying, He, Rongjun, Hui, Yuanyuan, Hao, Meirong, Li, Yue, Wang, Bo, Ou, Xiaohua, Xu, Jiaohui, Zhang, Yongfen, Wu, Kui, Geng, Chunyu, Zhou, Weiping, Zhou, Taicheng, Irwin, David M., Yang, Yingzhong, Ying, Liu, Bao, Haihua, Kim, Jaebum, Larkin, Denis M., Ma, Jian, Lewin, Harris A., Xing, Jinchuan, Platt, Roy N., II, Ray, David A., Auvil, Loretta, Capitanu, Boris, Zhang, Xiufeng, Zhang, Guojie, Murphy, Robert W., Wang, Jun, Zhang, Ya-Ping, and Wang, Jian

Published
2013

53. The genome of the mesopolyploid crop species Brassica rapa

Author

Wang, Xiaowu, Wang, Hanzhong, Wang, Jun, Sun, Rifei, Wu, Jian, Liu, Shengyi, Bai, Yinqi, Mun, Jeong-Hwan, Bancroft, Ian, Cheng, Feng, Huang, Sanwen, Li, Xixiang, Hua, Wei, Wang, Junyi, Wang, Xiyin, Freeling, Michael, Pires, J. Chris, Paterson, Andrew, Chalhoub, Boulos, Wang, Bo, Hayward, Alice, Sharpe, Andrew, Park, Beom-Seok, Weisshaar, Bernd, Liu, Binghang, Li, Bo, Liu, Bo, Tong, Chaobo, Song, Chi, Duran, Christopher, Peng, Chunfang, Geng, Chunyu, Koh, Chushin, Lin, Chuyu, Edwards, David, Mu, Desheng, Shen, Di, Soumpourou, Eleni, Li, Fei, Fraser, Fiona, Conant, Gavin, Lassalle, Gilles, King, Graham, Bonnema, Guusje, Tang, Haibao, Wang, Haiping, Belcram, Harry, Zhou, Heling, Hirakawa, Hideki, Abe, Hiroshi, Guo, Hui, Wang, Hui, Jin, Huizhe, Parkin, Isobel, Batley, Jacqueline, Kim, Jeong-Sun, Just, Jérémy, Li, Jianwen, Xu, Jiaohui, Deng, Jie, Kim, Jin Hyun, Li, Jingping, Yu, Jingyin, Meng, Jinling, Wang, Jinpeng, Min, Jiumeng, Poulain, Julie, Hatakeyama, Katsunori, Wu, Kui, Wang, Li, Fang, Lu, Trick, Martin, Links, Matthew, Zhao, Meixia, Jin, Mina, Ramchiary, Nirala, Drou, Nizar, Berkman, Paul, Cai, Qingle, Huang, Quanfei, Li, Ruiqiang, Tabata, Satoshi, Cheng, Shifeng, Zhang, Shu, Zhang, Shujiang, Huang, Shunmou, Sato, Shusei, Sun, Silong, Kwon, Soo-Jin, Choi, Su-Ryun, Lee, Tae-Ho, Fan, Wei, Zhao, Xiang, Tan, Xu, Xu, Xun, Wang, Yan, Qiu, Yang, Yin, Ye, Li, Yingrui, Wang, Xiaowu, Wang, Hanzhong, Wang, Jun, Sun, Rifei, Wu, Jian, Liu, Shengyi, Bai, Yinqi, Mun, Jeong-Hwan, Bancroft, Ian, Cheng, Feng, Huang, Sanwen, Li, Xixiang, Hua, Wei, Wang, Junyi, Wang, Xiyin, Freeling, Michael, Pires, J. Chris, Paterson, Andrew, Chalhoub, Boulos, Wang, Bo, Hayward, Alice, Sharpe, Andrew, Park, Beom-Seok, Weisshaar, Bernd, Liu, Binghang, Li, Bo, Liu, Bo, Tong, Chaobo, Song, Chi, Duran, Christopher, Peng, Chunfang, Geng, Chunyu, Koh, Chushin, Lin, Chuyu, Edwards, David, Mu, Desheng, Shen, Di, Soumpourou, Eleni, Li, Fei, Fraser, Fiona, Conant, Gavin, Lassalle, Gilles, King, Graham, Bonnema, Guusje, Tang, Haibao, Wang, Haiping, Belcram, Harry, Zhou, Heling, Hirakawa, Hideki, Abe, Hiroshi, Guo, Hui, Wang, Hui, Jin, Huizhe, Parkin, Isobel, Batley, Jacqueline, Kim, Jeong-Sun, Just, Jérémy, Li, Jianwen, Xu, Jiaohui, Deng, Jie, Kim, Jin Hyun, Li, Jingping, Yu, Jingyin, Meng, Jinling, Wang, Jinpeng, Min, Jiumeng, Poulain, Julie, Hatakeyama, Katsunori, Wu, Kui, Wang, Li, Fang, Lu, Trick, Martin, Links, Matthew, Zhao, Meixia, Jin, Mina, Ramchiary, Nirala, Drou, Nizar, Berkman, Paul, Cai, Qingle, Huang, Quanfei, Li, Ruiqiang, Tabata, Satoshi, Cheng, Shifeng, Zhang, Shu, Zhang, Shujiang, Huang, Shunmou, Sato, Shusei, Sun, Silong, Kwon, Soo-Jin, Choi, Su-Ryun, Lee, Tae-Ho, Fan, Wei, Zhao, Xiang, Tan, Xu, Xu, Xun, Wang, Yan, Qiu, Yang, Yin, Ye, and Li, Yingrui

Abstract

We report the annotation and analysis of the draft genome sequence of Brassica rapa accession Chiifu-401-42, a Chinese cabbage. We modeled 41,174 protein coding genes in the B. rapa genome, which has undergone genome triplication. We used Arabidopsis thaliana as an outgroup for investigating the consequences of genome triplication, such as structural and functional evolution. The extent of gene loss (fractionation) among triplicated genome segments varies, with one of the three copies consistently retaining a disproportionately large fraction of the genes expected to have been present in its ancestor. Variation in the number of members of gene families present in the genome may contribute to the remarkable morphological plasticity of Brassica species. The B. rapa genome sequence provides an important resource for studying the evolution of polyploid genomes and underpins the genetic improvement of Brassica oil and vegetable crops.

Published
2011

54. Draft genome sequence of the Tibetan antelope

Author

Ge, Ri-Li, primary, Cai, Qingle, additional, Shen, Yong-Yi, additional, San, A, additional, Ma, Lan, additional, Zhang, Yong, additional, Yi, Xin, additional, Chen, Yan, additional, Yang, Lingfeng, additional, Huang, Ying, additional, He, Rongjun, additional, Hui, Yuanyuan, additional, Hao, Meirong, additional, Li, Yue, additional, Wang, Bo, additional, Ou, Xiaohua, additional, Xu, Jiaohui, additional, Zhang, Yongfen, additional, Wu, Kui, additional, Geng, Chunyu, additional, Zhou, Weiping, additional, Zhou, Taicheng, additional, Irwin, David M., additional, Yang, Yingzhong, additional, Ying, Liu, additional, Bao, Haihua, additional, Kim, Jaebum, additional, Larkin, Denis M., additional, Ma, Jian, additional, Lewin, Harris A., additional, Xing, Jinchuan, additional, Platt, Roy N., additional, Ray, David A., additional, Auvil, Loretta, additional, Capitanu, Boris, additional, Zhang, Xiufeng, additional, Zhang, Guojie, additional, Murphy, Robert W., additional, Wang, Jun, additional, Zhang, Ya-Ping, additional, and Wang, Jian, additional

Published
2013
Full Text
View/download PDF

57. Caesium(I) hydrogen phthalate

Author

Hu, Mancheng, primary, Geng, Chunyu, additional, Li, Shuni, additional, Liu, Zhihong, additional, Jiang, Yucheng, additional, and Zhang, Guofang, additional

Published
2004
Full Text
View/download PDF

58. Ambroxol hydrochloride spray (Luo Runchang®) in the treatment of acute respiratory infectious diseases: a prospective, multicenter, open label, randomized controlled study.

Author

Cheng L, Liu M, Wang R, Cao S, Li R, Su B, Wei H, Yang H, Hou L, Geng C, Han Y, and Yang T

Abstract

Purpose: Cough and sputum are the most common clinical symptoms of acute respiratory tract infection. Ambroxol is a mucolytic expectorant commonly used in clinical practice. This study aimed to evaluate the efficacy, safety, and compliance of ambroxol hydrochloride spray (Luo Runchang ®) for the treatment of acute respiratory tract diseases in children., Methods: This was a multicenter, open-labeled, randomized controlled study. The experimental group received ambroxol hydrochloride oral sprays, and the control group received ambroxol hydrochloride oral solutions. The primary endpoint was the change in cough symptom scores from baseline. Secondary endpoints include changes in cough severity score, quality of life, adherence, and adverse events., Results: A total of 154 subjects were randomized and included in the analysis. The mean change of total cough symptom score of the spray group at the end of treatment was -4.7 (1.54) compared to -4.2 (1.62) in the solution group ( P  = 0.0005). The mean change of cough severity score was -5.7 (2.09) in the spray group compared to -5.2(2.04) in the solution group ( P  = 0.012). Quality of life scores significantly improved in the spray group ( P  < 0.0001) compared to the oral solution group. Medication adherence markers were significantly better in the spray group ( P  < 0.0001). The incidence of adverse events in the experimental group (1.33%) was lower than that in the control group (6.33%), but the difference between the groups was not statistically significant., Conclusion: Ambroxol hydrochloride spray significantly improved cough symptom score, cough severity score, and quality of life score compared to ambroxol hydrochloride oral solution., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (© 2024 Cheng, Liu, Wang, Cao, Li, Su, Wei, Yang, Hou, Geng, Han and Yang.)

Published
2024
Full Text
View/download PDF

60. Paired-end sequencing of long-range DNA fragments for de novo assembly of large, complex Mammalian genomes by direct intra-molecule ligation.

Author

Asan, Geng C, Chen Y, Wu K, Cai Q, Wang Y, Lang Y, Cao H, Yang H, Wang J, and Zhang X

Subjects
Algorithms, Animals, Chromosome Mapping, Genomic Library, Humans, Genome, Human, Mammals genetics, Mutagenesis, Insertional, Open Reading Frames, Sequence Analysis, DNA methods
Abstract

Background: The relatively short read lengths from next generation sequencing (NGS) technologies still pose a challenge for de novo assembly of complex mammal genomes. One important solution is to use paired-end (PE) sequence information experimentally obtained from long-range DNA fragments (>1 kb). Here, we characterize and extend a long-range PE library construction method based on direct intra-molecule ligation (or molecular linker-free circularization) for NGS., Results: We found that the method performs stably for PE sequencing of 2- to 5- kb DNA fragments, and can be extended to 10-20 kb (and even in extremes, up to ∼35 kb). We also characterized the impact of low quality input DNA on the method, and develop a whole-genome amplification (WGA) based protocol using limited input DNA (<1 µg). Using this PE dataset, we accurately assembled the YanHuang (YH) genome, the first sequenced Asian genome, into a scaffold N50 size of >2 Mb, which is over 100-times greater than the initial size produced with only small insert PE reads(17 kb). In addition, we mapped two 7- to 8- kb insertions in the YH genome using the larger insert sizes of the long-range PE data., Conclusions: In conclusion, we demonstrate here the effectiveness of this long-range PE sequencing method and its use for the de novo assembly of a large, complex genome using NGS short reads.

Published
2012
Full Text
View/download PDF

Catalog

Books, media, physical & digital resources
See catalog results