226 results on '"Fendler K"'
Search Results
52. K +-Dependence of electrogenic transport by the NaK–ATPase
- Author
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Gropp, T., Cornelius, F., and Fendler, K.
- Published
- 1998
- Full Text
- View/download PDF
53. Investigation of sugar binding kinetics of the E. coli sugar/H + symporter XylE using solid-supported membrane-based electrophysiology.
- Author
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Bazzone A, Tesmer L, Kurt D, Kaback HR, Fendler K, and Madej MG
- Subjects
- Carbohydrate Metabolism, Electrophysiology, Glucose metabolism, Kinetics, Membrane Transport Proteins genetics, Membrane Transport Proteins metabolism, Sugars metabolism, Escherichia coli genetics, Escherichia coli metabolism, Escherichia coli Proteins metabolism, Monosaccharide Transport Proteins metabolism, Symporters metabolism
- Abstract
Bacterial transporters are difficult to study using conventional electrophysiology because of their low transport rates and the small size of bacterial cells. Here, we applied solid-supported membrane-based electrophysiology to derive kinetic parameters of sugar translocation by the Escherichia coli xylose permease (XylE), including functionally relevant mutants. Many aspects of the fucose permease (FucP) and lactose permease (LacY) have also been investigated, which allow for more comprehensive conclusions regarding the mechanism of sugar translocation by transporters of the major facilitator superfamily. In all three of these symporters, we observed sugar binding and transport in real time to determine K
M , Vmax , KD , and kobs values for different sugar substrates. KD and kobs values were attainable because of a conserved sugar-induced electrogenic conformational transition within these transporters. We also analyzed interactions between the residues in the available X-ray sugar/H+ symporter structures obtained with different bound sugars. We found that different sugars induce different conformational states, possibly correlating with different charge displacements in the electrophysiological assay upon sugar binding. Finally, we found that mutations in XylE altered the kinetics of glucose binding and transport, as Q175 and L297 are necessary for uncoupling H+ and d-glucose translocation. Based on the rates for the electrogenic conformational transition upon sugar binding (>300 s-1 ) and for sugar translocation (2 s-1 - 30 s-1 for different substrates), we propose a multiple-step mechanism and postulate an energy profile for sugar translocation. We also suggest a mechanism by which d-glucose can act as an inhibitor for XylE., Competing Interests: Conflict of interest The authors declare that they have no conflicts of interest with the contents of this article., (Copyright © 2021 The Authors. Published by Elsevier Inc. All rights reserved.)- Published
- 2022
- Full Text
- View/download PDF
54. Implementation of an Outpatient HD-MTX Initiative.
- Author
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Sokol K, Yuan K, Piddoubny M, Sweeney E, Delengowski A, Fendler K, Espinosa G, Alberto J, Galanis P, Gung C, Stokley M, George M, Harris M, Martinez-Outschoorn U, Alpdogan O, Porcu P, and Binder AF
- Abstract
Introduction: Methotrexate (MTX) a folate antagonist is often given in high doses (≥500 mg/m
2 ) to treat a variety of disease processes. While inpatient administration has been the norm, outpatient administration, has been shown to be safe, effective, and patient centered. Here in we describe development of an outpatient HDMTX protocol and our initial experience., Methods: All patients were to receive their first cycle of HDMTX in the hospital to ensure they tolerate it well and also to use this time to assist in training for home administration. The outpatient protocol involved continuous IV sodium bicarbonate, along with oral leucovorin and acetazolamide. Patients were required to visit the infusion center daily for labs and methotrexate levels. Clear criteria for admission were developed in the case of delayed clearance or methotrexate toxicity., Results: Two patients completed the safety run-in phase. Both patients tolerated treatment well. There were no associated toxicity. Methotrexate cleared within 3 days for all cycles. Both patients were able to follow the preadmission instructions for sodium bicarbonate and acetazolamide. The patients reported adequate teaching on the protocol and were able to maintain frequency of urine dipstick checks., Conclusion: We developed and implemented an outpatient protocol for high dose methotrexate. This study largely details the development of this protocol and its initial safety evaluation. More work needs to be done to assess its feasibility on a larger number of patients who receive more cycles in the outpatient setting., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Sokol, Yuan, Piddoubny, Sweeney, Delengowski, Fendler, Espinosa, Alberto, Galanis, Gung, Stokley, George, Harris, Martinez-Outschoorn, Alpdogan, Porcu and Binder.)- Published
- 2022
- Full Text
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55. A channel profile report of the unusual K + channel KtrB.
- Author
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Mikušević V, Schrecker M, Kolesova N, Patiño-Ruiz M, Fendler K, and Hänelt I
- Subjects
- Biological Transport physiology, Cell Membrane metabolism, Ions metabolism, Membrane Proteins metabolism, Protein Subunits metabolism, Sodium metabolism, Vibrio alginolyticus metabolism, Bacterial Proteins metabolism, Cation Transport Proteins metabolism, Potassium metabolism, Potassium Channels metabolism
- Abstract
KtrAB is a key player in bacterial K
+ uptake required for K+ homeostasis and osmoadaptation. The system is unique in structure and function. It consists of the K+ -translocating channel subunit KtrB, which forms a dimer in the membrane, and the soluble regulatory subunit KtrA, which attaches to the cytoplasmic side of the dimer as an octameric ring conferring Na+ and ATP dependency to the system. Unlike most K+ channels, KtrB lacks the highly conserved T(X)GYG selectivity filter sequence. Instead, only a single glycine residue is found in each pore loop, which raises the question of how selective the ion channel is. Here, we characterized the KtrB subunit from the Gram-negative pathogen Vibrio alginolyticus by isothermal titration calorimetry, solid-supported membrane-based electrophysiology, whole-cell K+ uptake, and ACMA-based transport assays. We found that, despite its simple selectivity filter, KtrB selectively binds K+ with micromolar affinity. Rb+ and Cs+ bind with millimolar affinities. However, only K+ and the poorly binding Na+ are efficiently translocated, based on size exclusion by the gating loop. Importantly, the physiologically required K+ over Na+ selectivity is provided by the channel's high affinity for potassium, which interestingly results from the presence of the sodium ions themselves. In the presence of the KtrA subunit, sodium ions further decrease the Michaelis-Menten constant for K+ uptake from milli- to micromolar concentrations and increase the Vmax , suggesting that Na+ also facilitates channel gating. In conclusion, high binding affinity and facilitated K+ gating allow KtrAB to function as a selective K+ channel., (© 2019 Mikušević et al.)- Published
- 2019
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56. Mutation of two key aspartate residues alters stoichiometry of the NhaB Na + /H + exchanger from Klebsiella pneumoniae.
- Author
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Patiño-Ruiz M, Fendler K, and Călinescu O
- Subjects
- Aspartic Acid chemistry, Aspartic Acid genetics, Bacterial Proteins genetics, Bacterial Proteins metabolism, Klebsiella pneumoniae genetics, Klebsiella pneumoniae physiology, Membrane Potentials, Protein Domains, Sodium-Hydrogen Exchangers genetics, Sodium-Hydrogen Exchangers metabolism, Amino Acid Substitution, Bacterial Proteins chemistry, Klebsiella pneumoniae chemistry, Sodium-Hydrogen Exchangers chemistry
- Abstract
Bacterial NhaB Na
+ /H+ exchangers belonging to the Ion Transporter superfamily are poorly characterized in contrast to Na+ /H+ exchangers of the Cation Proton Antiporter superfamily which have NhaA from Escherichia coli as a prominent member. For a more detailed understanding of the intricacies of the exchanger's transport mechanism, mutational studies are essential. Therefore, we mutated two protonatable residues present in the putative transmembrane region of NhaB from Klebsiella pneumoniae (KpNhaB), which could serve as substrate binding sites, Asp146 and Asp404, to either glutamate or alanine and analyzed transport function and stability of the mutants using electrophysiological and fluorimetric techniques. While mutation of either Asp residue to Glu only had slight to moderate effects on the transport activity of the exchanger, the mutations D404A and D146A, in particular, had more profound effects on the transport function. Furthermore, a double mutant, D146A/D404A, exhibited a remarkable behavior at alkaline pH, where recorded electrical currents changed polarity, showing steady-state transport with a stoichiometry of H+ :Na+ < 1, as opposed to the H+ :Na+ > 1 stoichiometry of the WT. Thus, we showed that Asp146 and Asp404 are part of the substrate binding site(s) of KpNhaB and engineered a Na+ /H+ exchanger with a variable stoichiometry.- Published
- 2019
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57. Coupling efficiency of secondary active transporters.
- Author
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Henderson RK, Fendler K, and Poolman B
- Subjects
- Biological Transport, Kinetics, Membrane Transport Proteins chemistry
- Abstract
Secondary active transporters are fundamental to a myriad of biological processes. They use the electrochemical gradient of one solute to drive transport of another solute against its concentration gradient. Central to this mechanism is that the transport of one does not occur in the absence of the other. However, like in most of biology, imperfections in the coupling mechanism exist and we argue that these are innocuous and may even be beneficial for the cell. We discuss the energetics and kinetics of alternating-access in secondary transport and focus on the mechanistic aspects of imperfect coupling that give rise to leak pathways. Additionally, inspection of available transporter structures gives valuable insight into coupling mechanics, and we review literature where proteins have been altered to change their coupling efficiency.
- Published
- 2019
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58. Replacement of Lys-300 with a glutamine in the NhaA Na + /H + antiporter of Escherichia coli yields a functional electrogenic transporter.
- Author
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Patiño-Ruiz M, Dwivedi M, Călinescu O, Karabel M, Padan E, and Fendler K
- Subjects
- Amino Acid Substitution, Escherichia coli genetics, Escherichia coli Proteins genetics, Glutamine, Ion Transport physiology, Lysine, Mutation, Missense, Protein Stability, Sodium-Hydrogen Exchangers genetics, Escherichia coli metabolism, Escherichia coli Proteins metabolism, Sodium-Hydrogen Exchangers metabolism
- Abstract
Much of the research on Na
+ /H+ exchange has been done in prokaryotic models, mainly on the NhaA Na+ /H+ -exchanger from Escherichia coli (EcNhaA). Two conserved aspartate residues, Asp-163 and Asp-164, are essential for transport and are candidates for possible binding sites for the two H+ that are exchanged for one Na+ to make the overall transport process electrogenic. More recently, a proposed mechanism of transport for EcNhaA has suggested direct binding of one of the transported H+ to the conserved Lys-300 residue, a salt bridge partner of Asp-163. This contention is supported by a study reporting that substitution of the equivalent residue, Lys-305, of a related Na+ /H+ antiporter, NapA from Thermus thermophilus , renders the transporter electroneutral. In this work, we sought to establish whether the Lys-300 residue and its partner Asp-163 are essential for the electrogenicity of EcNhaA. To that end, we replaced Lys-300 with Gln, either alone or together with the simultaneous substitution of Asp-163 with Asn, and characterized these transporter variants in electrophysiological experiments combined with H+ transport measurements and stability analysis. We found that K300Q EcNhaA can still support electrogenic Na+ /H+ antiport in EcNhaA, but has reduced thermal stability. A parallel electrophysiological investigation of the K305Q variant of TtNapA revealed that it is also electrogenic. Furthermore, replacement of both salt bridge partners in the ion-binding site of EcNhaA produced an electrogenic variant (D163N/K300Q). Our findings indicate that alternative mechanisms sustain EcNhaA activity in the absence of canonical ion-binding residues and that the conserved lysines confer structural stability., Competing Interests: The authors declare that they have no conflicts of interest with the contents of this article., (© 2019 Patiño-Ruiz et al.)- Published
- 2019
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59. A Loose Relationship: Incomplete H + /Sugar Coupling in the MFS Sugar Transporter GlcP.
- Author
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Bazzone A, Zabadne AJ, Salisowski A, Madej MG, and Fendler K
- Subjects
- Hydrogen-Ion Concentration, Bacterial Proteins metabolism, Glucose Transport Proteins, Facilitative metabolism, Protons, Sugars metabolism
- Abstract
The glucose transporter from Staphylococcus epidermidis, GlcP
Se , is a homolog of the human GLUT sugar transporters of the major facilitator superfamily. Together with the xylose transporter from Escherichia coli, XylEEc , the other prominent prokaryotic GLUT homolog, GlcPSe , is equipped with a conserved proton-binding site arguing for an electrogenic transport mode. However, the electrophysiological analysis of GlcPSe presented here reveals important differences between the two GLUT homologs. GlcPSe , unlike XylEEc , does not perform steady-state electrogenic transport at symmetrical pH conditions. Furthermore, when a pH gradient is applied, partially uncoupled transport modes can be generated. In contrast to other bacterial sugar transporters analyzed so far, in GlcPSe sugar binding, translocation and release are also accomplished by the deprotonated transporter. Based on these experimental results, we conclude that coupling of sugar and H+ transport is incomplete in GlcPSe . To verify the viability of the observed partially coupled GlcPSe transport modes, we propose a universal eight-state kinetic model in which any degree of coupling is realized and H+ /sugar symport represents only a specific instance. Furthermore, using sequence comparison with strictly coupled XylEEc and similar sugar transporters, we identify an additional charged residue that may be essential for effective H+ /sugar symport., (Copyright © 2017 Biophysical Society. Published by Elsevier Inc. All rights reserved.)- Published
- 2017
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60. From Gene to Function: Cell-Free Electrophysiological and Optical Analysis of Ion Pumps in Nanodiscs.
- Author
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Henrich E, Sörmann J, Eberhardt P, Peetz O, Mezhyrova J, Morgner N, Fendler K, Dötsch V, Wachtveitl J, Bernhard F, and Bamann C
- Subjects
- Chromatography, Gel, Escherichia coli, Feasibility Studies, Flavobacteriaceae, Ion Transport, Mass Spectrometry, Membrane Potentials, Nanostructures, Optogenetics, Photolysis, Rhodopsins, Microbial isolation & purification, Membranes, Artificial, Optical Imaging, Rhodopsins, Microbial chemistry
- Abstract
Nanodiscs that hold a lipid bilayer surrounded by a boundary of scaffold proteins have emerged as a powerful tool for membrane protein solubilization and analysis. By combining nanodiscs and cell-free expression technologies, even completely detergent-free membrane protein characterization protocols can be designed. Nanodiscs are compatible with various techniques, and due to their bilayer environment and increased stability, they are often superior to detergent micelles or liposomes for membrane protein solubilization. However, transport assays in nanodiscs have not been conducted so far, due to limitations of the two-dimensional nature of nanodisc membranes that offers no compartmentalization. Here, we study Krokinobacter eikastus rhodopsin-2 (KR2), a microbial light-driven sodium or proton pump, with noncovalent mass-spectrometric, electrophysiological, and flash photolysis measurements after its cotranslational insertion into nanodiscs. We demonstrate the feasibility of adsorbing nanodiscs containing KR2 to an artificial bilayer. This allows us to record light-induced capacitive currents that reflect KR2's ion transport activity. The solid-supported membrane assay with nanodisc samples provides reliable control over the ionic condition and information of the relative ion activity of this promiscuous pump. Our strategy is complemented with flash photolysis data, where the lifetimes of different photointermediates were determined at different ionic conditions. The advantage of using identical samples to three complementary approaches allows for a comprehensive comparability. The cell-free synthesis in combination with nanodiscs provides a defined hydrophobic lipid environment minimizing the detergent dependence often seen in assays with membrane proteins. KR2 is a promising tool for optogenetics, thus directed engineering to modify ion selectivity can be highly beneficial. Our approach, using the fast generation of functional ion pumps incorporated into nanodiscs and their subsequent analysis by several biophysical techniques, can serve as a versatile screening and engineering platform. This may open new avenues for the study of ion pumps and similar electrogenic targets., (Copyright © 2017 Biophysical Society. Published by Elsevier Inc. All rights reserved.)
- Published
- 2017
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61. Competition is the basis of the transport mechanism of the NhaB Na+/H+ exchanger from Klebsiella pneumoniae.
- Author
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Patiño-Ruiz M, Ganea C, Fendler K, and Călinescu O
- Subjects
- Acridine Orange metabolism, Amino Acid Sequence, Bacterial Proteins chemistry, Biological Transport drug effects, Cell Membrane drug effects, Cell Membrane metabolism, Escherichia coli metabolism, Hydrogen-Ion Concentration, Kinetics, Lithium pharmacology, Microbial Viability drug effects, Sequence Alignment, Sodium pharmacology, Sodium-Hydrogen Exchangers chemistry, Substrate Specificity drug effects, Bacterial Proteins metabolism, Klebsiella pneumoniae metabolism, Sodium-Hydrogen Exchangers metabolism
- Abstract
Na+/H+ exchange is essential for survival of all organisms, having a role in the regulation of the intracellular Na+ concentration, pH and cell volume. Furthermore, Na+/H+ exchangers were shown to be involved in the virulence of the bacterium Yersinia pestis, indicating they might be potential targets for novel antibiotic treatments. The model system for Na+/H+ exchangers is the NhaA transporter from Escherichia coli, EcNhaA. Therefore, the general transport mechanism of NhaA exchangers is currently well characterized. However, much less is known about NhaB exchangers, with only a limited number of studies available. The pathogen Klebsiella pneumoniae, which is a major source of nosocomial infection, possesses three electrogenic Na+/H+ exchangers, KpNhaA1, KpNhaA2 and KpNhaB, none of which have been previously investigated. Our aim in this study was to functionally characterize KpNhaB using solid supported membrane-based electrophysiology as the main investigation technique, and thus provide the first electrophysiological investigation of an NhaB Na+/H+ exchanger. We found that NhaB can be described by the same competition-based mechanism that was shown to be valid for electrogenic NhaA and NapA, and for electroneutral NhaP Na+/H+ exchangers. For comparison we also characterized the activity of KpNhaA1 and KpNhaA2 and found that the three exchangers have complementary activity profiles, which is likely a survival advantage for K. pneumoniae when faced with environments of different salinity and pH. This underlines their importance as potential antibiotic drug targets.
- Published
- 2017
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62. Lysine 300 is essential for stability but not for electrogenic transport of the Escherichia coli NhaA Na + /H + antiporter.
- Author
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Călinescu O, Dwivedi M, Patiño-Ruiz M, Padan E, and Fendler K
- Subjects
- Biological Transport, Biological Transport, Active, Crystallography, X-Ray, Fluorometry, Hydrogen-Ion Concentration, Mutagenesis, Site-Directed, Mutation, Phenotype, Protein Structure, Secondary, Protein Transport, Spectrometry, Fluorescence, Escherichia coli metabolism, Escherichia coli Proteins metabolism, Lysine chemistry, Sodium-Hydrogen Exchangers metabolism
- Abstract
Na
+ /H+ antiporters are located in the cytoplasmic and intracellular membranes and play crucial roles in regulating intracellular pH, Na+ , and volume. The NhaA antiporter of Escherichia coli is the best studied member of the Na+ /H+ exchanger family and a model system for all related Na+ /H+ exchangers, including eukaryotic representatives. Several amino acid residues are important for the transport activity of NhaA, including Lys-300, a residue that has recently been proposed to carry one of the two H+ ions that NhaA exchanges for one Na+ ion during one transport cycle. Here, we sought to characterize the effects of mutating Lys-300 of NhaA to amino acid residues containing side chains of different polarity and length ( i.e. Ala, Arg, Cys, His, Glu, and Leu) on transporter stability and function. Salt resistance assays, acridine-orange fluorescence dequenching, solid supported membrane-based electrophysiology, and differential scanning fluorometry were used to characterize Na+ and H+ transport, charge translocation, and thermal stability of the different variants. These studies revealed that NhaA could still perform electrogenic Na+ /H+ exchange even in the absence of a protonatable residue at the Lys-300 position. However, all mutants displayed lower thermal stability and reduced ion transport activity compared with the wild-type enzyme, indicating the critical importance of Lys-300 for optimal NhaA structural stability and function. On the basis of these experimental data, we propose a tentative mechanism integrating the functional and structural role of Lys-300., (© 2017 by The American Society for Biochemistry and Molecular Biology, Inc.)- Published
- 2017
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63. SSM-Based Electrophysiology for Transporter Research.
- Author
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Bazzone A, Barthmes M, and Fendler K
- Subjects
- Animals, Biological Transport, CHO Cells, Cell-Free System, Cricetulus, Electrodes, Equipment Design, High-Throughput Screening Assays instrumentation, High-Throughput Screening Assays methods, Kinetics, Membrane Proteins chemistry, Membrane Proteins isolation & purification, Membrane Transport Proteins chemistry, Membrane Transport Proteins isolation & purification, Proteolipids chemistry, Workflow, Electrophysiology instrumentation, Electrophysiology methods, Membrane Proteins metabolism, Membrane Transport Proteins metabolism
- Abstract
Functional characterization of transport proteins using conventional electrophysiology can be challenging, especially for low turnover transporters or transporters from bacteria and intracellular compartments. Solid-supported membrane (SSM)-based electrophysiology is a sensitive and cell-free assay technique for the characterization of electrogenic membrane proteins. Purified proteins reconstituted into proteoliposomes or membrane vesicles from cell culture or native tissues are adsorbed to the sensor holding an SSM. A substrate or a ligand is applied via rapid solution exchange. The electrogenic transporter activity charges the sensor, which is recorded as a transient current. The high stability of the SSM allows cumulative measurements on the same sensor using different experimental conditions. This allows the determination of kinetic properties including EC
50 , IC50 , Km , KD , and rate constants of electrogenic reactions. About 100 different transporters have been measured so far using this technique, among them symporters, exchangers, uniporters, ATP-, redox-, and light-driven ion pumps, as well as receptors and ion channels. Different instruments apply this technique: the laboratory setups use a closed flow-through arrangement, while the commercially available SURFE2 R N1 resembles a pipetting robot. For drug screening purposes high-throughput systems, such as the SURFE2 R 96SE enable the simultaneous measurement of up to 96 sensors., (© 2017 Elsevier Inc. All rights reserved.)- Published
- 2017
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64. Electrogenic Cation Binding in the Electroneutral Na+/H+ Antiporter of Pyrococcus abyssi.
- Author
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Călinescu O, Linder M, Wöhlert D, Yildiz Ö, Kühlbrandt W, and Fendler K
- Subjects
- Cations metabolism, Hydrogen-Ion Concentration, Ion Transport, Substrate Specificity, Archaeal Proteins metabolism, Pyrococcus abyssi metabolism, Sodium-Hydrogen Exchangers metabolism
- Abstract
Na
+ /H+ antiporters in the CPA1 branch of the cation proton antiporter family drive the electroneutral exchange of H+ against Na+ ions and ensure pH homeostasis in eukaryotic and prokaryotic organisms. Although their transport cycle is overall electroneutral, specific partial reactions are electrogenic. Here, we present an electrophysiological study of the PaNhaP Na+ /H+ antiporter from Pyrococcus abyssi reconstituted into liposomes. Positive transient currents were recorded upon addition of Na+ to PaNhaP proteoliposomes, indicating a reaction where positive charge is rapidly displaced into the proteoliposomes with a rate constant of k >200 s-1 We attribute the recorded currents to an electrogenic reaction that includes Na+ binding and possibly occlusion. Subsequently, positive charge is transported out of the cell associated with H+ binding, so that the overall reaction is electroneutral. We show that the differences in pH profile and Na+ affinity of PaNhaP and the related MjNhaP1 from Methanocaldococcus jannaschii can be attributed to an additional negatively charged glutamate residue in PaNhaP. The results are discussed in the context of the physiological function of PaNhaP and other microbial Na+ /H+ exchangers. We propose that both, electroneutral and electrogenic Na+ /H+ antiporters, represent a carefully tuned self-regulatory system, which drives the cytoplasmic pH back to neutral after any deviation., (© 2016 by The American Society for Biochemistry and Molecular Biology, Inc.)- Published
- 2016
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65. pH Regulation of Electrogenic Sugar/H+ Symport in MFS Sugar Permeases.
- Author
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Bazzone A, Madej MG, Kaback HR, and Fendler K
- Subjects
- Biological Transport, Active physiology, Escherichia coli genetics, Escherichia coli Proteins genetics, Hydrogen-Ion Concentration, Monosaccharide Transport Proteins genetics, Symporters genetics, Escherichia coli metabolism, Escherichia coli Proteins metabolism, Monosaccharide Transport Proteins metabolism, Proton-Motive Force physiology, Symporters metabolism
- Abstract
Bacterial sugar symporters in the Major Facilitator Superfamily (MFS) use the H+ (and in a few cases Na+) electrochemical gradients to achieve active transport of sugar into the cell. Because a number of structures of MFS sugar symporters have been solved recently, molecular insight into the transport mechanism is possible from detailed functional analysis. We present here a comparative electrophysiological study of the lactose permease (LacY), the fucose permease (FucP) and the xylose permease (XylE), which reveals common mechanistic principles and differences. In all three symporters energetically downhill electrogenic sugar/H+ symport is observed. Comparison of the pH dependence of symport at symmetrical pH exhibits broad bell-shaped pH profiles extending over 3 to 6 pH units and a decrease at extremely alkaline pH ≥ 9.4 and at acidic to neutral pH = 4.6-7.5. The pH dependence can be described by an acidic to neutral apparent pK (pKapp) and an alkaline pKapp. Experimental evidence suggests that the alkaline pKapp is due to H+ depletion at the protonation site, while the acidic pKapp is due to inhibition of deprotonation. Since previous studies suggest that a single carboxyl group in LacY (Glu325) may be the only side chain directly involved in H+ translocation and a carboxyl side chain with similar properties has been identified in FucP (Asp46) and XylE (Asp27), the present results imply that the pK of this residue is switched during H+/sugar symport in all three symporters.
- Published
- 2016
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66. Functional characterization of solute carrier (SLC) 26/sulfate permease (SulP) proteins in membrane mimetic systems.
- Author
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Srinivasan L, Baars TL, Fendler K, and Michel H
- Subjects
- Anion Transport Proteins isolation & purification, Bicarbonates chemistry, Biological Transport, Humans, Hydrogen-Ion Concentration, Membranes metabolism, Salmonella typhimurium chemistry, Substrate Specificity, Anion Transport Proteins chemistry, Fumarates chemistry, Membranes chemistry, Salmonella typhimurium enzymology
- Abstract
Solute carrier (SLC) 26 or sulfate permease (SulP) anion transporters, belong to a phylogenetically ancient family of secondary active transporters. Members of the family are involved in several human genetic diseases and cell physiological processes. Despite their importance, the substrates for transport by this family of proteins have been poorly characterized. In this study, recombinant StmYchM/DauA, a SulP from Salmonella typhimurium was purified to homogeneity and functionally characterized. StmYchM/DauA was found to be a dimer in solution as determined by size exclusion chromatography coupled to multiple angle light scattering. We report a functional characterization of the SulP proteins in two membrane mimetic systems and reveal a dual nature of anionic substrates for SulP. StmYchM/DauA functionally incorporated into nanodiscs could bind fumarate with millimolar affinities (KD = 4.6 ± 0.29 mM) as detected by intrinsic tryptophan fluorescence quench studies. In contrast, electrophysiological experiments performed in reconstituted liposomes indicate a strong bicarbonate transport in the presence of chloride but no detectable electrogenic fumarate transport. We hence suggest that while SulP acts as an electrogenic bicarbonate transporter, fumarate may serve as substrate under different conditions indicating multiple functions of SulP., (Copyright © 2016 Elsevier B.V. All rights reserved.)
- Published
- 2016
- Full Text
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67. A universal mechanism for transport and regulation of CPA sodium proton exchangers.
- Author
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Călinescu O and Fendler K
- Subjects
- Biological Transport, Humans, Hydrogen-Ion Concentration, Kinetics, Models, Biological, Sodium-Hydrogen Exchangers chemistry, Sodium-Hydrogen Exchangers metabolism
- Abstract
Recent studies performed on a series of Na+/H+ exchangers have led us to postulate a general mechanism for Na+/H+ exchange in the monovalent cation/proton antiporter superfamily. This simple mechanism employs a single binding site for which both substrates compete. The developed kinetic model is self-regulatory, ensuring down-regulation of transport activity at extreme pH, and elegantly explains the pH-dependent activity of Na+/H+ exchangers. The mechanism was experimentally verified and shown to describe both electrogenic and electroneutral exchangers. Using a small number of parameters, exchanger activity can be modeled under different conditions, providing insights into the physiological role of Na+/H+ exchangers.
- Published
- 2015
- Full Text
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68. Structural and Functional Studies of NirC from Salmonella typhimurium.
- Author
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Rycovska-Blume A, Lü W, Andrade S, Fendler K, and Einsle O
- Subjects
- Crystallography, X-Ray methods, Humans, Models, Molecular, Protein Conformation, Salmonella Infections microbiology, Salmonella typhimurium metabolism, Anion Transport Proteins chemistry, Anion Transport Proteins metabolism, Bacterial Proteins chemistry, Bacterial Proteins metabolism, Salmonella typhimurium chemistry
- Abstract
NirC is a pentameric transport system for monovalent anions that is expressed in the context of assimilatory nitrite reductase NirBD in a wide variety of enterobacterial species. A NirC pentamer contains individual pores in each protomer that mediate the passage of at least the nitrite [Formula: see text] and nitrate [Formula: see text] anions. As a member of the formate/nitrite transporter family of membrane transport proteins, NirC shares a range of structural and functional features with the formate channel FocA and the hydrosulfide channel AsrD (HSC). NirC from the enteropathogen Salmonella typhimurium has been studied by X-ray crystallography, proton uptake assays, and different electrophysiological techniques, and the picture that has emerged shows a fast and versatile transport system for nitrite that doubles as a defense system during the enteric life of the bacterium. Structural and functional assays are described, which shed light on the transport mechanism of this important molecular machine., (© 2015 Elsevier Inc. All rights reserved.)
- Published
- 2015
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69. Species differences in bacterial NhaA Na+/H+ exchangers.
- Author
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Călinescu O, Danner E, Böhm M, Hunte C, and Fendler K
- Subjects
- Electrophysiological Phenomena, Hydrogen-Ion Concentration, Kinetics, Species Specificity, Bacterial Proteins metabolism, Helicobacter pylori, Sodium-Hydrogen Exchangers metabolism
- Abstract
Bacteria have adapted their NhaA Na(+)/H(+) exchangers responsible for salt homeostasis to their different habitats. We present an electrophysiological and kinetic analysis of NhaA from Helicobacter pylori and compare it to the previously investigated exchangers from Escherichia coli and Salmonella typhimurium. Properties of all three transporters are described by a simple model using a single binding site for H(+) and Na(+). We show that H.pylori NhaA only has a small acidic shift of its pH-dependent activity profile compared to the other transporters and discuss why a more drastic change in its pH activity profile is not physiologically required., (Copyright © 2014 The Authors. Published by Elsevier B.V. All rights reserved.)
- Published
- 2014
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70. Molecular characterization of the Na+/H+-antiporter NhaA from Salmonella Typhimurium.
- Author
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Lentes CJ, Mir SH, Boehm M, Ganea C, Fendler K, and Hunte C
- Subjects
- Amino Acid Sequence, Biological Transport, Electrophysiological Phenomena, Hydrogen-Ion Concentration, Molecular Sequence Data, Protein Multimerization, Protein Structure, Quaternary, Salmonella typhimurium physiology, Sodium metabolism, Species Specificity, Substrate Specificity, Bacterial Proteins chemistry, Bacterial Proteins metabolism, Salmonella typhimurium metabolism, Sodium-Hydrogen Exchangers chemistry, Sodium-Hydrogen Exchangers metabolism
- Abstract
Na+/H+ antiporters are integral membrane proteins that are present in almost every cell and in every kingdom of life. They are essential for the regulation of intracellular pH-value, Na+-concentration and cell volume. These secondary active transporters exchange sodium ions against protons via an alternating access mechanism, which is not understood in full detail. Na+/H+ antiporters show distinct species-specific transport characteristics and regulatory properties that correlate with respective physiological functions. Here we present the characterization of the Na+/H+ antiporter NhaA from Salmonella enterica serovar Thyphimurium LT2, the causing agent of food-born human gastroenteritis and typhoid like infections. The recombinant antiporter was functional in vivo and in vitro. Expression of its gene complemented the Na+-sensitive phenotype of an E. coli strain that lacks the main Na+/H+ antiporters. Purified to homogeneity, the antiporter was a dimer in solution as accurately determined by size-exclusion chromatography combined with multi-angle laser-light scattering and refractive index monitoring. The purified antiporter was fully capable of electrogenic Na+(Li+)/H+-antiport when reconstituted in proteoliposomes and assayed by solid-supported membrane-based electrophysiological measurements. Transport activity was inhibited by 2-aminoperimidine. The recorded negative currents were in agreement with a 1Na+(Li+)/2H+ stoichiometry. Transport activity was low at pH 7 and up-regulation above this pH value was accompanied by a nearly 10-fold decrease of KmNa (16 mM at pH 8.5) supporting a competitive substrate binding mechanism. K+ does not affect Na+ affinity or transport of substrate cations, indicating that selectivity of the antiport arises from the substrate binding step. In contrast to homologous E. coli NhaA, transport activity remains high at pH values above 8.5. The antiporter from S. Typhimurium is a promising candidate for combined structural and functional studies to contribute to the elucidation of the mechanism of pH-dependent Na+/H+ antiporters and to provide insights in the molecular basis of species-specific growth and survival strategies.
- Published
- 2014
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71. Keeping it simple, transport mechanism and pH regulation in Na+/H+ exchangers.
- Author
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Călinescu O, Paulino C, Kühlbrandt W, and Fendler K
- Subjects
- Archaeal Proteins genetics, Hydrogen-Ion Concentration, Ion Transport physiology, Methanocaldococcus genetics, Sodium-Hydrogen Exchangers genetics, Archaeal Proteins metabolism, Methanocaldococcus metabolism, Sodium-Hydrogen Exchangers metabolism
- Abstract
Na(+)/H(+) exchangers are essential for regulation of intracellular proton and sodium concentrations in all living organisms. We examined and experimentally verified a kinetic model for Na(+)/H(+) exchangers, where a single binding site is alternatively occupied by Na(+) or one or two H(+) ions. The proposed transport mechanism inherently down-regulates Na(+)/H(+) exchangers at extreme pH, preventing excessive cytoplasmic acidification or alkalinization. As an experimental test system we present the first electrophysiological investigation of an electroneutral Na(+)/H(+) exchanger, NhaP1 from Methanocaldococcus jannaschii (MjNhaP1), a close homologue of the medically important eukaryotic NHE Na(+)/H(+) exchangers. The kinetic model describes the experimentally observed substrate dependences of MjNhaP1, and the transport mechanism explains alkaline down-regulation of MjNhaP1. Because this model also accounts for acidic down-regulation of the electrogenic NhaA Na(+)/H(+) exchanger from Escherichia coli (EcNhaA, shown in a previous publication) we conclude that it applies generally to all Na(+)/H(+) exchangers, electrogenic as well as electroneutral, and elegantly explains their pH regulation. Furthermore, the electrophysiological analysis allows insight into the electrostatic structure of the translocation complex in electroneutral and electrogenic Na(+)/H(+) exchangers.
- Published
- 2014
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- View/download PDF
72. NhaA Na+/H+ antiporter mutants that hardly react to the membrane potential.
- Author
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Alkoby D, Rimon A, Budak M, Patino-Ruiz M, Călinescu O, Fendler K, and Padan E
- Subjects
- Electrophysiology, Escherichia coli genetics, Escherichia coli growth & development, Escherichia coli Proteins chemistry, Escherichia coli Proteins genetics, Hydrogen-Ion Concentration, Kinetics, Mutagenesis, Site-Directed, Mutant Proteins chemistry, Mutant Proteins genetics, Protein Conformation, Sodium-Hydrogen Exchangers chemistry, Sodium-Hydrogen Exchangers genetics, Cell Membrane metabolism, Escherichia coli metabolism, Escherichia coli Proteins metabolism, Membrane Potentials physiology, Mutant Proteins metabolism, Mutation genetics, Sodium-Hydrogen Exchangers metabolism
- Abstract
pH and Na+ homeostasis in all cells requires Na+/H+ antiporters. The crystal structure, obtained at pH 4, of NhaA, the main antiporter of Escherichia coli, has provided general insights into an antiporter mechanism and its unique pH regulation. Here, we describe a general method to select various NhaA mutants from a library of randomly mutagenized NhaA. The selected mutants, A167P and F267C are described in detail. Both mutants are expressed in Escherichia coli EP432 cells at 70-95% of the wild type but grow on selective medium only at neutral pH, A167P on Li+ (0.1 M) and F267C on Na+ (0.6 M). Surprising for an electrogenic secondary transporter, and opposed to wild type NhaA, the rates of A167P and F267C are almost indifferent to membrane potential. Detailed kinetic analysis reveals that in both mutants the rate limiting step of the cation exchange cycle is changed from an electrogenic to an electroneutral reaction.
- Published
- 2014
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- View/download PDF
73. Electrophysiological characterization of uncoupled mutants of LacY.
- Author
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Gaiko O, Bazzone A, Fendler K, and Kaback HR
- Subjects
- Electrophysiological Phenomena, Escherichia coli Proteins genetics, Escherichia coli Proteins physiology, Lactose metabolism, Liposomes metabolism, Models, Molecular, Mutagenesis, Site-Directed, Proteolipids metabolism, Membrane Transport Proteins genetics, Membrane Transport Proteins physiology, Symporters metabolism
- Abstract
In this study of the lactose permease of Escherichia coli (LacY), five functionally irreplaceable residues involved specifically in H(+) translocation (Arg302 and Glu325) or in the coupling between protonation and sugar binding (Tyr236, Glu269, and His322) were mutated individually or together with mutant Glu325 → Ala. The wild type and each mutant were purified and reconstituted into proteoliposomes, which were then examined using solid-supported-membrane-based electrophysiology. Mutants Glu325 → Ala or Arg302 → Ala, in which H(+) symport is abolished, exhibit a weakly electrogenic rapid reaction triggered by sugar binding. The reaction is essentially absent in mutant Tyr236 → Phe, Glu269 → Ala, and His322 → Ala, and each of these mutations blocks the electrogenic reaction observed in the Glu325 → Ala mutant. The findings are consistent with the interpretation that the electrogenic reaction induced by sugar binding is due to rearrangement of charged residues in LacY and that this reaction is blocked by mutation of each member of the Tyr236/Glu269/His322 triad. In addition, further support is provided for the conclusion that deprotonation is rate limiting for downhill lactose/H(+) symport.
- Published
- 2013
- Full Text
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74. Differential effects of mutations on the transport properties of the Na+/H+ antiporter NhaA from Escherichia coli.
- Author
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Mager T, Braner M, Kubsch B, Hatahet L, Alkoby D, Rimon A, Padan E, and Fendler K
- Subjects
- Escherichia coli chemistry, Escherichia coli genetics, Escherichia coli Proteins chemistry, Escherichia coli Proteins genetics, Hydrogen-Ion Concentration, Ion Transport physiology, Protein Structure, Tertiary, Sodium-Hydrogen Exchangers chemistry, Sodium-Hydrogen Exchangers genetics, Escherichia coli metabolism, Escherichia coli Proteins metabolism, Models, Biological, Mutation, Missense, Sodium-Hydrogen Exchangers metabolism
- Abstract
Na(+)/H(+) antiporters show a marked pH dependence, which is important for their physiological function in eukaryotic and prokaryotic cells. In NhaA, the Escherichia coli Na(+)/H(+) antiporter, specific single site mutations modulating the pH profile of the transporter have been described in the past. To clarify the mechanism by which these mutations influence the pH dependence of NhaA, the substrate dependence of the kinetics of selected NhaA variants was electrophysiologically investigated and analyzed with a kinetic model. It is shown that the mutations affect NhaA activity in quite different ways by changing the properties of the binding site or the dynamics of the transporter. In the first case, pK and/or KD(Na) are altered, and in the second case, the rate constants of the conformational transition between the inside and the outside open conformation are modified. It is shown that residues as far apart as 15-20 Å from the binding site can have a significant impact on the dynamics of the conformational transitions or on the binding properties of NhaA. The implications of these results for the pH regulation mechanism of NhaA are discussed.
- Published
- 2013
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75. Introduction to solid supported membrane based electrophysiology.
- Author
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Bazzone A, Costa WS, Braner M, Călinescu O, Hatahet L, and Fendler K
- Subjects
- Adsorption, Electrophysiology instrumentation, Gold chemistry, Membrane Proteins metabolism, Proteolipids metabolism, Sulfhydryl Compounds chemistry, Electrophysiology methods, Membrane Proteins chemistry, Membranes, Artificial, Proteolipids chemistry
- Abstract
The electrophysiological method we present is based on a solid supported membrane (SSM) composed of an octadecanethiol layer chemisorbed on a gold coated sensor chip and a phosphatidylcholine monolayer on top. This assembly is mounted into a cuvette system containing the reference electrode, a chlorinated silver wire. After adsorption of membrane fragments or proteoliposomes containing the membrane protein of interest, a fast solution exchange is used to induce the transport activity of the membrane protein. In the single solution exchange protocol two solutions, one non-activating and one activating solution, are needed. The flow is controlled by pressurized air and a valve and tubing system within a faraday cage. The kinetics of the electrogenic transport activity is obtained via capacitive coupling between the SSM and the proteoliposomes or membrane fragments. The method, therefore, yields only transient currents. The peak current represents the stationary transport activity. The time dependent transporter currents can be reconstructed by circuit analysis. This method is especially suited for prokaryotic transporters or eukaryotic transporters from intracellular membranes, which cannot be investigated by patch clamp or voltage clamp methods.
- Published
- 2013
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- View/download PDF
76. Electrophysiological characterization of membrane transport proteins.
- Author
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Grewer C, Gameiro A, Mager T, and Fendler K
- Subjects
- Animals, Bacteria chemistry, Bacteria metabolism, Biological Transport, Biological Transport, Active, Cell Membrane metabolism, Humans, Lipid Bilayers chemistry, Membrane Transport Proteins genetics, Patch-Clamp Techniques, Electrophysiological Phenomena, Membrane Transport Proteins chemistry, Membrane Transport Proteins metabolism
- Abstract
Active transport in biological membranes has been traditionally studied using a variety of biochemical and biophysical techniques, including electrophysiology. This review focuses on aspects of electrophysiological methods that make them particularly suited for the investigation of transporter function. Two major approaches to electrical recording of transporter activity are discussed: (a) artificial planar lipid membranes, such as the black lipid membrane and solid supported membrane, which are useful for studies on bacterial transporters and transporters of intracellular compartments, and (b) patch clamp and voltage clamp techniques, which investigate transporters in native cellular membranes. The analytical power of these methods is highlighted by several examples of mechanistic studies of specific membrane proteins, including cytochrome c oxidase, NhaA Na(+)/H(+) exchanger, ClC-7 H(+)/Cl(-) exchanger, glutamate transporters, and neutral amino acid transporters. These examples reveal the wealth of mechanistic information that can be obtained when electrophysiological methods are used in combination with rapid perturbation approaches.
- Published
- 2013
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- View/download PDF
77. Investigation of the sodium-binding sites in the sodium-coupled betaine transporter BetP.
- Author
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Khafizov K, Perez C, Koshy C, Quick M, Fendler K, Ziegler C, and Forrest LR
- Subjects
- Amino Acid Sequence, Binding Sites, Carrier Proteins chemistry, Carrier Proteins genetics, Crystallography, X-Ray, GABA Plasma Membrane Transport Proteins, Models, Molecular, Molecular Dynamics Simulation, Molecular Sequence Data, Mutagenesis, Site-Directed, Sequence Homology, Amino Acid, Carrier Proteins metabolism, Sodium metabolism
- Abstract
Sodium-coupled substrate transport plays a central role in many biological processes. However, despite knowledge of the structures of several sodium-coupled transporters, the location of the sodium-binding site(s) often remains unclear. Several of these structures have the five transmembrane-helix inverted-topology repeat, LeuT-like (FIRL) fold, whose pseudosymmetry has been proposed to facilitate the alternating-access mechanism required for transport. Here, we provide biophysical, biochemical, and computational evidence for the location of the two cation-binding sites in the sodium-coupled betaine symporter BetP. A recent X-ray structure of BetP in a sodium-bound closed state revealed that one of these sites, equivalent to the Na2 site in related transporters, is located between transmembrane helices 1 and 8 of the FIRL-fold; here, we confirm the location of this site by other means. Based on the pseudosymmetry of this fold, we hypothesized that the second site is located between the equivalent helices 6 and 3. Molecular dynamics simulations of the closed-state structure suggest this second sodium site involves two threonine sidechains and a backbone carbonyl from helix 3, a phenylalanine from helix 6, and a water molecule. Mutating the residues proposed to form the two binding sites increased the apparent K(m) and K(d) for sodium, as measured by betaine uptake, tryptophan fluorescence, and (22)Na(+) binding, and also diminished the transient currents measured in proteoliposomes using solid supported membrane-based electrophysiology. Taken together, these results provide strong evidence for the identity of the residues forming the sodium-binding sites in BetP.
- Published
- 2012
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78. The nitrite transport protein NirC from Salmonella typhimurium is a nitrite/proton antiporter.
- Author
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Rycovska A, Hatahet L, Fendler K, and Michel H
- Subjects
- Acridine Orange chemistry, Anion Transport Proteins genetics, Anion Transport Proteins metabolism, Bacterial Proteins genetics, Bacterial Proteins metabolism, Hydrogen-Ion Concentration, Ion Transport physiology, Nitrites metabolism, Salmonella typhimurium genetics, Salmonella typhimurium metabolism, Salmonella typhimurium pathogenicity, Virulence Factors genetics, Virulence Factors metabolism, Anion Transport Proteins chemistry, Bacterial Proteins chemistry, Liposomes chemistry, Nitrites chemistry, Salmonella typhimurium chemistry, Virulence Factors chemistry
- Abstract
In anaerobically grown bacteria, transport of nitrite is catalyzed by an integral membrane protein of the form ate-nitrite transporter family, NirC, which in Salmonella typhimurium plays a critical role in intracellular virulence. We present a functional characterization of the S. typhimurium nitrite transporter StmNirC in native membrane vesicles as well as purified and reconstituted into proteoliposomes. Using an electrophysiological technique based on solid supported membranes, we show nitrite induced translocation of negative charges into proteoliposomes reconstituted with purified StmNirC. These data demonstrate the electrogenicity of StmNirC and its substrate specificity for nitrite. Monitoring changes in ΔpH on everted membrane vesicles containing overexpressed StmNirC using acridine orange as a pH indicator we demonstrate that StmNirC acts as a secondary active transporter. It promotes low affinity transport of nitrite coupled to H(+) antiport with a pH independent profile in the pH range from 6 to 8. In addition to nitrite also nitrate is transported by StmNirC, but with reduced flux and complete absence of proton antiport activity. Taken together, these data suggest a bispecific anion selectivity of StmNirC with an ion specific transport mode. This may play a role in regulating nitrite transport under physiological conditions., (Copyright © 2012 Elsevier B.V. All rights reserved.)
- Published
- 2012
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79. Transport mechanism and pH regulation of the Na+/H+ antiporter NhaA from Escherichia coli: an electrophysiological study.
- Author
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Mager T, Rimon A, Padan E, and Fendler K
- Subjects
- Hydrogen-Ion Concentration, Ion Transport physiology, Escherichia coli metabolism, Escherichia coli Proteins metabolism, Hydrogen metabolism, Sodium metabolism, Sodium-Hydrogen Exchangers metabolism
- Abstract
Using an electrophysiological assay the activity of NhaA was tested in a wide pH range from pH 5.0 to 9.5. Forward and reverse transport directions were investigated at zero membrane potential using preparations with inside-out and right side-out-oriented transporters with Na(+) or H(+) gradients as the driving force. Under symmetrical pH conditions with a Na(+) gradient for activation, both the wt and the pH-shifted G338S variant exhibit highly symmetrical transport activity with bell-shaped pH dependences, but the optimal pH was shifted 1.8 pH units to the acidic range in the variant. In both strains the pH dependence was associated with a systematic increase of the K(m) for Na(+) at acidic pH. Under symmetrical Na(+) concentration with a pH gradient for NhaA activation, an unexpected novel characteristic of the antiporter was revealed; rather than being down-regulated, it remained active even at pH as low as 5. These data allowed a transport mechanism to advance based on competing Na(+) and H(+) binding to a common transport site and a kinetic model to develop quantitatively explaining the experimental results. In support of these results, both alkaline pH and Na(+) induced the conformational change of NhaA associated with NhaA cation translocation as demonstrated here by trypsin digestion. Furthermore, Na(+) translocation was found to be associated with the displacement of a negative charge. In conclusion, the electrophysiological assay allows the revelation of the mechanism of NhaA antiport and sheds new light on the concept of NhaA pH regulation.
- Published
- 2011
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80. The G215R mutation in the Cl-/H+-antiporter ClC-7 found in ADO II osteopetrosis does not abolish function but causes a severe trafficking defect.
- Author
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Schulz P, Werner J, Stauber T, Henriksen K, and Fendler K
- Subjects
- Animals, CHO Cells, Cell Line, Cricetinae, Cricetulus, Humans, Lysosomes metabolism, Mutation, Missense, Osteopetrosis genetics, Protein Transport, Rats, Chloride Channels genetics, Chloride Channels metabolism, Osteopetrosis metabolism
- Abstract
Background: ClC-7 is a ubiquitous transporter which is broadly expressed in mammalian tissues. It is implied in the pathogenesis of lysosomal storage disease and osteopetrosis. Because of its endosomal/lysosomal localization it is still poorly characterized., Methodology/principal Findings: An electrophysiological characterization of rat ClC-7 using solid-supported membrane-based electrophysiology is presented. The measured currents show the characteristics of ClC-7 and confirm its function as a Cl(-)/H(+)-antiporter. We have used rat ClC-7 in CHO cells as a model system to investigate the functionality and cellular localization of the wt transporter and its variant G213R ClC-7 which is the analogue of human G215R ClC-7 responsible for autosomal dominant osteopetrosis type II. Our study shows that rat G213R ClC-7 is functional but has a localization defect in CHO cells which prevents it from being correctly targeted to the lysosomal membrane. The electrophysiological assay is tested as a tool for drug discovery. The assay is validated with a number of drug candidates. It is shown that ClC-7 is inhibited by DIDS, NPPB and NS5818 at micromolar concentrations., Conclusions/significance: It is suggested that the scenario found in the CHO model system also applies to the human transporter and that mislocalization rather than impaired functionality of G215R ClC-7 is the primary cause of the related autosomal dominant osteopetrosis type II. Furthermore, the robust solid-supported membrane-based electrophysiological assay is proposed for rapid screening for potential ClC-7 inhibitors which are discussed for treatment of osteoporosis.
- Published
- 2010
- Full Text
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81. Delineating electrogenic reactions during lactose/H+ symport.
- Author
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Garcia-Celma JJ, Ploch J, Smirnova I, Kaback HR, and Fendler K
- Subjects
- Binding Sites, Cell Membrane chemistry, Cell Membrane enzymology, Electrophysiological Phenomena, Escherichia coli Proteins genetics, Hydrogen-Ion Concentration, Monosaccharide Transport Proteins genetics, Mutation, Protons, Symporters genetics, Escherichia coli enzymology, Escherichia coli Proteins chemistry, Lactose chemistry, Monosaccharide Transport Proteins chemistry, Symporters chemistry
- Abstract
Electrogenic reactions accompanying downhill lactose/H(+) symport catalyzed by the lactose permease of Escherichia coli (LacY) have been assessed using solid-supported membrane-based electrophysiology with improved time resolution. Rates of charge translocation generated by purified LacY reconstituted into proteoliposomes were analyzed over a pH range from 5.2 to 8.5, which allows characterization of two electrogenic steps in the transport mechanism: (i) a weak electrogenic reaction triggered by sugar binding and observed under conditions where H(+) translocation is abolished either by acidic pH or by a Glu325 --> Ala mutation in the H(+) binding site (this step with a rate constant of approximately 200 s(-1) for wild-type LacY leads to an intermediate proposed to represent an "occluded" state) and (ii) a major electrogenic reaction corresponding to 94% of the total charge translocated at pH 8, which is pH-dependent with a maximum rate of approximately 30 s(-1) and a pK of 7.5. This partial reaction is assigned to rate-limiting H(+) release on the cytoplasmic side of LacY during turnover. These findings together with previous electrophysiological results and biochemical-biophysical studies are included in an overall kinetic mechanism that allows delineation of the electrogenic steps in the reaction pathway.
- Published
- 2010
- Full Text
- View/download PDF
82. Measuring ion channels on solid supported membranes.
- Author
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Schulz P, Dueck B, Mourot A, Hatahet L, and Fendler K
- Subjects
- Adenosine Triphosphate metabolism, Animals, Cell Line, Cell Membrane drug effects, Cell Membrane physiology, Electric Organ drug effects, Electric Organ physiology, Gramicidin chemistry, Humans, Ion Channels antagonists & inhibitors, Ion Channels metabolism, Liposomes chemistry, Membrane Potentials drug effects, Membrane Potentials physiology, Membranes drug effects, Membranes metabolism, Nicotinic Antagonists pharmacology, Purinergic P2 Receptor Antagonists, Rats, Receptors, Nicotinic chemistry, Receptors, Nicotinic metabolism, Receptors, Purinergic P2 chemistry, Receptors, Purinergic P2 metabolism, Receptors, Purinergic P2X2, Sodium metabolism, Torpedo, Electrophysiology methods, Ion Channels chemistry, Membranes chemistry
- Abstract
Application of solid supported membranes (SSMs) for the functional investigation of ion channels is presented. SSM-based electrophysiology, which has been introduced previously for the investigation of active transport systems, is expanded for the analysis of ion channels. Membranes or liposomes containing ion channels are adsorbed to an SSM and a concentration gradient of a permeant ion is applied. Transient currents representing ion channel transport activity are recorded via capacitive coupling. We demonstrate the application of the technique to liposomes reconstituted with the peptide cation channel gramicidin, vesicles from native tissue containing the nicotinic acetylcholine receptor, and membranes from a recombinant cell line expressing the ionotropic P2X2 receptor. It is shown that stable ion gradients, both inside as well as outside directed, can be applied and currents are recorded with an excellent signal/noise ratio. For the nicotinic acetylcholine receptor and the P2X2 receptor excellent assay quality factors of Z' = 0.55 and Z' = 0.67, respectively, are obtained. This technique opens up new possibilities in cases where conventional electrophysiology fails like the functional characterization of ion channels from intracellular compartments. It also allows for robust fully automatic assays for drug screening.
- Published
- 2009
- Full Text
- View/download PDF
83. Bacterial transporters: charge translocation and mechanism.
- Author
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Ganea C and Fendler K
- Subjects
- Amino Acid Transport Systems, Neutral chemistry, Amino Acid Transport Systems, Neutral metabolism, Binding Sites, Electrophysiological Phenomena, Kinetics, Models, Biological, Protein Conformation, Sodium-Hydrogen Exchangers chemistry, Sodium-Hydrogen Exchangers metabolism, Symporters chemistry, Symporters metabolism, Carrier Proteins chemistry, Carrier Proteins metabolism, Escherichia coli Proteins chemistry, Escherichia coli Proteins metabolism
- Abstract
A comparative review of the electrophysiological characterization of selected secondary active transporters from Escherichia coli is presented. In melibiose permease MelB and the Na(+)/proline carrier PutP pre-steady-state charge displacements can be assigned to an electrogenic conformational transition associated with the substrate release process. In both transporters cytoplasmic release of the sugar or the amino acid as well as release of the coupling cation are associated with a charge displacement. This suggests a common transport mechanism for both transporters. In the NhaA Na(+)/H(+) exchanger charge translocation due to its steady-state transport activity is observed. A new model is proposed for pH regulation of NhaA that is based on coupled Na(+) and H(+) equilibrium binding.
- Published
- 2009
- Full Text
- View/download PDF
84. Electrophysiological characterization of LacY.
- Author
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Garcia-Celma JJ, Smirnova IN, Kaback HR, and Fendler K
- Subjects
- Biological Transport, Electricity, Electrophysiological Phenomena, Escherichia coli Proteins chemistry, Escherichia coli Proteins genetics, Hydrogen metabolism, Hydrogen-Ion Concentration, Lactose metabolism, Liposomes, Monosaccharide Transport Proteins chemistry, Monosaccharide Transport Proteins genetics, Symporters chemistry, Symporters genetics, Escherichia coli Proteins metabolism, Monosaccharide Transport Proteins metabolism, Symporters metabolism
- Abstract
Electrogenic events due to the activity of wild-type lactose permease from Escherichia coli (LacY) were investigated with proteoliposomes containing purified LacY adsorbed on a solid-supported membrane electrode. Downhill sugar/H(+) symport into the proteoliposomes generates transient currents. Studies at different lipid-to-protein ratios and at different pH values, as well as inactivation by N-ethylmaleimide, show that the currents are due specifically to the activity of LacY. From analysis of the currents under different conditions and comparison with biochemical data, it is suggested that the predominant electrogenic event in downhill sugar/H(+) symport is H(+) release. In contrast, LacY mutants Glu-325-->Ala and Cys-154-->Gly, which bind ligand normally, but are severely defective with respect to lactose/H(+) symport, exhibit only a small electrogenic event on addition of LacY-specific substrates, representing 6% of the total charge displacement of the wild-type. This activity is due either to substrate binding per se or to a conformational transition after substrate binding, and is not due to sugar/H(+) symport. We propose that turnover of LacY involves at least 2 electrogenic reactions: (i) a minor electrogenic step that occurs on sugar binding and is due to a conformational transition in LacY; and (ii) a major electrogenic step probably due to cytoplasmic release of H(+) during downhill sugar/H(+) symport, which is the limiting step for this mode of transport.
- Published
- 2009
- Full Text
- View/download PDF
85. An automatic electrophysiological assay for the neuronal glutamate transporter mEAAC1.
- Author
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Krause R, Watzke N, Kelety B, Dörner W, and Fendler K
- Subjects
- Amino Acid Transport System X-AG genetics, Animals, Aspartic Acid pharmacology, CHO Cells, Carboxylic Acids pharmacology, Cricetinae, Cricetulus, Dose-Response Relationship, Drug, Glutamic Acid pharmacology, Inhibitory Concentration 50, Ion Transport drug effects, Ion Transport physiology, Membrane Potentials drug effects, Mice, Oxazoles pharmacology, Patch-Clamp Techniques, Potassium metabolism, Sodium metabolism, Transfection methods, Amino Acid Transport System X-AG metabolism, Electrophysiology methods, Membrane Potentials physiology
- Abstract
A rapid and robust electrophysiological assay based on solid supported membranes (SSM) for the murine neuronal glutamate transporter mEAAC1 is presented. Measurements at different concentrations revealed the EAAC1 specific affinities for l-glutamate (K(m)=24microM), l-aspartate (K(m)=5microM) and Na(+) (K(m)=33mM) and an inhibition constant K(i) for dl-threo-beta-benzyloxyaspartic acid (TBOA) of 1microM. Inhibition by 3-hydroxy-4,5,6,6a-tetrahydro-3aH-pyrrolo[3,4-d]isoxazole-6-carboxylic acid (HIP-B) was not purely competitive with an IC(50) of 13microM. Experiments using SCN(-) concentration jumps yielded large transient currents in the presence of l-glutamate showing the characteristics of the glutamate-gated anion conductance of EAAC1. Thus, SSM-based electrophysiology allows the analysis of all relevant transport modes of the glutamate transporter on the same sample. K(+) and Na(+) gradients could be applied to the transporter. Experiments in the presence and absence of Na(+) and K(+) gradients demonstrated that the protein is still able to produce a charge translocation when no internal K(+) is present. In this case, the signal amplitude is smaller and a lower apparent affinity for l-glutamate of 144microM is found. Finally the assay was adapted to a commercial fully automatic system for SSM-based electrophysiology and was validated by determining the substrate affinities and inhibition constants as for the laboratory setup. The combination of automatic function and its ability to monitor all transport modes of EAAC1 make this system an universal tool for industrial drug discovery.
- Published
- 2009
- Full Text
- View/download PDF
86. SSM-based electrophysiology.
- Author
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Schulz P, Garcia-Celma JJ, and Fendler K
- Subjects
- Animals, Biophysical Phenomena, Electrophysiology instrumentation, Humans, Ion Transport physiology, Recombinant Proteins metabolism, Electrophysiology methods, Membrane Proteins physiology, Symporters physiology
- Abstract
An assay technique for the electrical characterization of electrogenic transport proteins on solid supported membranes is presented. Membrane vesicles, proteoliposomes or membrane fragments containing the transporter are adsorbed to the solid supported membrane and are activated by providing a substrate or a ligand via a rapid solution exchange. This technique opens up new possibilities where conventional electrophysiology fails like transporters or ion channels from bacteria and from intracellular compartments. Its rugged design and potential for automation make it suitable for drug screening.
- Published
- 2008
- Full Text
- View/download PDF
87. Rapid activation of the melibiose permease MelB immobilized on a solid-supported membrane.
- Author
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Garcia-Celma JJ, Dueck B, Stein M, Schlueter M, Meyer-Lipp K, Leblanc G, and Fendler K
- Subjects
- Electrodes, Enzyme Activation, Enzymes, Immobilized chemistry, Spectrometry, Fluorescence, Symporters chemistry, Time Factors, Enzymes, Immobilized metabolism, Symporters metabolism
- Abstract
Rapid solution exchange on a solid-supported membrane (SSM) is investigated using fluidic structures and a solid-supported membrane of 1 mm diameter in wall jet geometry. The flow is analyzed with a new technique based on specific ion interactions with the surface combined with an electrical measurement. The critical parameters affecting the time course of the solution exchange and the transfer function describing the time resolution of the SSM system are determined. The experimental data indicate that solution transport represents an intermediate situation between the plug flow and the Hagen-Poiseuille laminar flow regime. However, to a good approximation the rise of the surface concentration can be described by Hagen-Poiseuille flow with ideal mixing at the surface of the SSM. Using an improved cuvette design, solution exchange as fast as 2 ms was achieved at the surface of a solid-supported membrane. As an application of the technique, the rate constant of a fast electrogenic reaction in the melibiose permease MelB, a bacterial ( Escherichia coli) sugar transporter, is determined. For comparison, the kinetics of a conformational transition of the same transporter was measured using stopped-flow tryptophan fluorescence spectroscopy. The relaxation time constant obtained for the charge displacement agrees with that determined in the stopped-flow experiments. This demonstrates that upon sugar binding MelB undergoes an electrogenic conformational transition with a rate constant of k approximately 250 s (-1).
- Published
- 2008
- Full Text
- View/download PDF
88. Charge transfer in P-type ATPases investigated on planar membranes.
- Author
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Tadini-Buoninsegni F, Bartolommei G, Moncelli MR, and Fendler K
- Subjects
- Adenosine Triphosphatases chemistry, Adenosine Triphosphatases physiology, Animals, Calcium-Transporting ATPases chemistry, Cation Transport Proteins chemistry, Cation Transport Proteins physiology, Electricity, Escherichia coli Proteins chemistry, Escherichia coli Proteins physiology, H(+)-K(+)-Exchanging ATPase chemistry, Humans, Ion Transport, Sarcoplasmic Reticulum enzymology, Sodium-Potassium-Exchanging ATPase chemistry, Calcium-Transporting ATPases physiology, H(+)-K(+)-Exchanging ATPase physiology, Lipid Bilayers chemistry, Sodium-Potassium-Exchanging ATPase physiology
- Abstract
Planar lipid bilayers, e.g., black lipid membranes (BLM) and solid supported membranes (SSM), have been employed to investigate charge movements during the reaction cycle of P-type ATPases. The BLM/SSM method allows a direct measurement of the electrical currents generated by the cation transporter following chemical activation by a substrate concentration jump. The electrical current transients provides information about the reaction mechanism of the enzyme. In particular, the BLM/SSM technique allows identification of electrogenic steps which in turn may be used to localize ion translocation during the reaction cycle of the pump. In addition, using the high time resolution of the technique, especially when rapid activation via caged ATP is employed, rate constants of electrogenic and electroneutral steps can be determined. In the present review, we will discuss the main results obtained by the BLM and SSM methods and how they have contributed to unravel the transport mechanism of P-type ATPases.
- Published
- 2008
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89. The conserved dipole in transmembrane helix 5 of KdpB in the Escherichia coli KdpFABC P-type ATPase is crucial for coupling and the electrogenic K+-translocation step.
- Author
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Becker D, Fendler K, Altendorf K, and Greie JC
- Subjects
- Adenosine Triphosphatases chemistry, Adenosine Triphosphatases genetics, Cation Transport Proteins chemistry, Cation Transport Proteins genetics, Escherichia coli Proteins chemistry, Escherichia coli Proteins genetics, Genetic Complementation Test, Ion Transport, Plasmids, Substrate Specificity, Adenosine Triphosphatases metabolism, Cation Transport Proteins metabolism, Escherichia coli enzymology, Escherichia coli Proteins metabolism, Potassium metabolism
- Abstract
The KdpFABC complex of Escherichia coli, a high-affinity K+-uptake system, belongs to the group of P-type ATPases and is responsible for ATP-driven K+ uptake in the case of K+ limitation. Sequence alignments identified two conserved charged residues, D583 and K586, which are located at the center of transmembrane helix 5 (TM 5) of the catalytic KdpB subunit, and which are supposed to establish a dipole involved in energy coupling. Cells in which the two charges were eliminated or inverted by mutagenesis displayed a clearly slower growth rate with respect to wild-type cells under K+-limiting conditions. Purified KdpFABC complexes from several K586 mutants and a D583K:K586D double mutant showed a reduced K+-stimulated ATPase activity together with an increased resistance to orthovanadate. Upon reconstitution into liposomes, only the conservative K586R mutant was able to facilitate K+ transport, whereas the elimination of the positive charge at position 586 as well as inverting the charges at positions 583 and 586 (D583K:K586D) led to an uncoupling of ATP hydrolysis and K+ transport. Electrophysiological measurements with KdpFABC-containing proteoliposomes adsorbed to planar lipid bilayers revealed that in case of the D583K:K586D double mutant the characteristic K+-independent electrogenic step within the reaction cycle is lacking, thereby clearly arguing for an exact positioning of the dipole for coupling within the functional enzyme complex. In addition, these findings strongly suggest that the dipole residues in KdpB are not directly responsible for the characteristic electrogenic reaction step of KdpFABC, which most likely occurs within the K+-translocating KdpA subunit.
- Published
- 2007
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90. Specific anion and cation binding to lipid membranes investigated on a solid supported membrane.
- Author
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Garcia-Celma JJ, Hatahet L, Kunz W, and Fendler K
- Subjects
- Salts, Anions, Cations, Lipids chemistry, Membranes, Artificial
- Abstract
Ion binding to a lipid membrane is studied by application of a rapid solution exchange on a solid supported membrane. The resulting charge displacement is analyzed in terms of the affinity of the applied ions to the lipid surface. We find that chaotropic anions and kosmotropic cations are attracted to the membrane independent of the membrane composition. In particular, the same behavior is found for lipid headgroups bearing no charge, like monoolein. This general trend is modulated by electrostatic interaction of the ions with the lipid headgroup charge. These results cannot be explained with the current models of specific ion interactions.
- Published
- 2007
- Full Text
- View/download PDF
91. Structure and function of prokaryotic glutamate transporters from Escherichia coli and Pyrococcus horikoshii.
- Author
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Raunser S, Appel M, Ganea C, Geldmacher-Kaufer U, Fendler K, and Kühlbrandt W
- Subjects
- Amino Acid Transport System X-AG isolation & purification, Archaeal Proteins metabolism, Aspartic Acid metabolism, Crystallography, Detergents, Escherichia coli Proteins metabolism, Kinetics, Macromolecular Substances, Microscopy, Electron, Amino Acid Transport System X-AG chemistry, Amino Acid Transport System X-AG metabolism, Escherichia coli metabolism, Pyrococcus horikoshii metabolism
- Abstract
The glutamate transporters GltP(Ec) from Escherichia coli and GltP(Ph) from Pyrococcus horikoshii were overexpressed in E. coli and purified to homogeneity with a yield of 1-2 mg/L of culture. Single-particle analysis and electron microscopy indicate that GltP(Ph) is a trimer in detergent solution. Electron microscopy of negatively stained GltP(Ph) two-dimensional crystals shows that the transporter is a trimer also in the membrane. Gel filtration of GltP(Ec) indicates a reversible equilibrium of two oligomeric states in detergent solution that we identified as a trimer and hexamer by blue-native gel electrophoresis and cross-linking. The purified transporters were fully active upon reconstitution into liposomes, as demonstrated by the uptake of radioactively labeled L-aspartate or L-glutamate. L-aspartate/L-glutamate transport of GltP(Ec) involves the cotransport of protons and depends only on pH, whereas GltP(Ph) catalyzes L-glutamate transport with a cotransport of H+ or Na+. L-glutamate induces a fast transient current in GltP(Ph) proteoliposomes coupled to a solid supported membrane (SSM). We show that the electric signal depends on the concentration of Na+ or H+ outside the proteoliposomes and that GltP(Ph) does not require K+ inside the proteoliposomes. In addition, the electrical currents are inhibited by TBOA and HIP-B. The half-saturation concentration for activation of GltP(Ph) glutamate transport (K0.5(glut)) is 194 microM.
- Published
- 2006
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92. Transporter assays using solid supported membranes: a novel screening platform for drug discovery.
- Author
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Kelety B, Diekert K, Tobien J, Watzke N, Dörner W, Obrdlik P, and Fendler K
- Subjects
- Biological Assay methods, Biosensing Techniques methods, Electrochemistry methods, Equipment Design, Equipment Failure Analysis, Microfluidic Analytical Techniques methods, Biological Assay instrumentation, Biosensing Techniques instrumentation, Drug Design, Electrochemistry instrumentation, Membrane Transport Proteins chemistry, Membranes, Artificial, Microfluidic Analytical Techniques instrumentation
- Abstract
Transporters are important targets in drug discovery. However, high throughput-capable assays for this class of membrane proteins are still missing. Here we present a novel drug discovery platform technology based on solid supported membranes. The functional principles of the technology are described, and a sample selection of transporter assays is discussed: the H(+)-dependent peptide transporter PepT1, the gastric proton pump, and the Na(+)/Ca(2+) exchanger. This technology promises to have an important impact on the drug discovery process.
- Published
- 2006
- Full Text
- View/download PDF
93. The inner interhelix loop 4-5 of the melibiose permease from Escherichia coli takes part in conformational changes after sugar binding.
- Author
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Meyer-Lipp K, Séry N, Ganea C, Basquin C, Fendler K, and Leblanc G
- Subjects
- Cysteine metabolism, Electrophysiology, Escherichia coli Proteins genetics, Fluorescence Resonance Energy Transfer, Liposomes chemistry, Liposomes metabolism, Mutagenesis, Site-Directed, Protein Binding, Sodium metabolism, Symporters genetics, Escherichia coli enzymology, Escherichia coli Proteins chemistry, Escherichia coli Proteins metabolism, Melibiose metabolism, Protein Structure, Secondary, Symporters chemistry, Symporters metabolism
- Abstract
Cytoplasmic loop 4-5 of the melibiose permease from Escherichia coli is essential for the process of Na+-sugar translocation (Abdel-Dayem, M., Basquin, C., Pourcher, T., Cordat, E., and Leblanc, G. (2003) J. Biol. Chem. 278, 1518-1524). In the present report, we analyze functional consequences of mutating each of the three acidic amino acids in this loop into cysteines. Among the mutants, only the E142C substitution impairs selectively Na+-sugar translocation. Because R141C has a similar defect, we investigated these two mutants in more detail. Liposomes containing purified mutated melibiose permease were adsorbed onto a solid supported lipid membrane, and transient electrical currents resulting from different substrate concentration jumps were recorded. The currents evoked by a melibiose concentration jump in the presence of Na+, previously assigned to an electrogenic conformational transition (Meyer-Lipp, K., Ganea, C., Pourcher, T., Leblanc, G., and Fendler, K. (2004) Biochemistry 43, 12606-12613), were much smaller for the two mutants than the corresponding signals in cysteineless MelB. Furthermore, in R141C the stimulating effect of melibiose on Na+ affinity was lost. Finally, whereas tryptophan fluorescence spectroscopy revealed impaired conformational changes upon melibiose binding in the mutants, fluorescence resonance energy transfer measurements indicated that the mutants still show cooperative modification of their sugar binding sites by Na+. These data suggest that: 1) loop 4-5 contributes to the coordinated interactions between the ion and sugar binding sites; 2) it participates in an electrogenic conformational transition after melibiose binding that is essential for the subsequent obligatory coupled translocation of substrates. A two-step mechanism for substrate translocation in the melibiose permease is suggested.
- Published
- 2006
- Full Text
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94. Evaluation of detergents for the soluble expression of alpha-helical and beta-barrel-type integral membrane proteins by a preparative scale individual cell-free expression system.
- Author
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Klammt C, Schwarz D, Fendler K, Haase W, Dötsch V, and Bernhard F
- Subjects
- Animals, Antiporters chemistry, Antiporters genetics, Antiporters metabolism, Bacterial Outer Membrane Proteins chemistry, Bacterial Outer Membrane Proteins genetics, Bacterial Outer Membrane Proteins metabolism, Escherichia coli genetics, Escherichia coli metabolism, Escherichia coli Proteins chemistry, Escherichia coli Proteins genetics, Escherichia coli Proteins metabolism, Freeze Fracturing, Liposomes chemistry, Liposomes metabolism, Membrane Proteins genetics, Membrane Proteins metabolism, Protein Folding, Receptors, Vasopressin chemistry, Receptors, Vasopressin genetics, Receptors, Vasopressin metabolism, Receptors, Virus chemistry, Receptors, Virus genetics, Receptors, Virus metabolism, Solubility, Swine, Cell-Free System, Detergents chemistry, Membrane Proteins chemistry, Protein Structure, Secondary
- Abstract
Cell-free expression has become a highly promising tool for the fast and efficient production of integral membrane proteins. The proteins can be produced as precipitates that solubilize in mild detergents usually without any prior denaturation steps. Alternatively, membrane proteins can be synthesized in a soluble form by adding detergents to the cell-free system. However, the effects of a representative variety of detergents on the production, solubility and activity of a wider range of membrane proteins upon cell-free expression are currently unknown. We therefore analyzed the cell-free expression of three structurally very different membrane proteins, namely the bacterial alpha-helical multidrug transporter, EmrE, the beta-barrel nucleoside transporter, Tsx, and the porcine vasopressin receptor of the eukaryotic superfamily of G-protein coupled receptors. All three membrane proteins could be produced in amounts of several mg per one ml of reaction mixture. In general, the detergent 1-myristoyl-2-hydroxy-sn-glycero-3-[phospho-rac-(1-glycerol)] was found to be most effective for the resolubilization of membrane protein precipitates, while long chain polyoxyethylene-alkyl-ethers proved to be most suitable for the soluble expression of all three types of membrane proteins. The yield of soluble expressed membrane protein remained relatively stable above a certain threshold concentration of the detergents. We report, for the first time, the high-level cell-free expression of a beta-barrel type membrane protein in a functional form. Structural and functional variations of the analyzed membrane proteins are evident that correspond with the mode of expression and that depend on the supplied detergent.
- Published
- 2005
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95. Sugar binding induced charge translocation in the melibiose permease from Escherichia coli.
- Author
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Meyer-Lipp K, Ganea C, Pourcher T, Leblanc G, and Fendler K
- Subjects
- Binding Sites, Cations, Monovalent, Electrochemistry, Electrodes, Electron Transport, Enzyme Inhibitors chemistry, Escherichia coli Proteins antagonists & inhibitors, Escherichia coli Proteins metabolism, Ethylmaleimide chemistry, Hydrogen-Ion Concentration, Melibiose metabolism, Protein Binding, Protein Conformation, Protein Transport, Proteolipids chemistry, Sodium metabolism, Substrate Specificity, Sulfhydryl Compounds chemistry, Symporters antagonists & inhibitors, Symporters metabolism, Escherichia coli Proteins chemistry, Melibiose chemistry, Symporters chemistry
- Abstract
Electrogenic events associated with the activity of the melibiose permease (MelB), a transporter from Escherichia coli, were investigated. Proteoliposomes containing purified MelB were adsorbed to a solid supported lipid membrane, activated by a substrate concentration jump, and transient currents were measured. When the transporter was preincubated with Na(+) at saturating concentrations, a charge translocation in the protein upon melibiose binding could still be observed. This result demonstrates that binding of the uncharged substrate melibiose triggers a charge displacement in the protein. Further analysis showed that the charge displacement is neither related to extra Na(+) binding to the transporter, nor to the displacement of already bound Na(+) within the transporter. The electrogenic melibiose binding process is explained by a conformational change with concomitant displacement of charged amino acid side chains and/or a reorientation of helix dipoles. A kinetic model is suggested, in which Na(+) and melibiose binding are distinct electrogenic processes associated with approximately the same charge displacement. These binding reactions are fast in the presence of the respective cosubstrate (k > 50 s(-1)).
- Published
- 2004
- Full Text
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96. Charge displacements during ATP-hydrolysis and synthesis of the Na+-transporting FoF1-ATPase of Ilyobacter tartaricus.
- Author
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Burzik C, Kaim G, Dimroth P, Bamberg E, and Fendler K
- Subjects
- Adenosine Diphosphate chemistry, Adenosine Triphosphatases chemistry, Adenosine Triphosphate biosynthesis, Adenosine Triphosphate pharmacology, Binding Sites, Biological Transport, Cation Transport Proteins chemistry, Cations, Dose-Response Relationship, Drug, Electrophysiology, Hydrogen chemistry, Hydrogen-Ion Concentration, Hydrolysis, Kinetics, Lipid Bilayers, Liposomes metabolism, Models, Biological, Sodium chemistry, Sodium pharmacology, Temperature, Time Factors, Adenosine Triphosphate chemistry, Cell Membrane metabolism, Fusobacteria enzymology, Ion Transport physiology, Proton-Translocating ATPases biosynthesis, Proton-Translocating ATPases chemistry
- Abstract
Transient electrical currents generated by the Na(+)-transporting F(o)F(1)-ATPase of Ilyobacter tartaricus were observed in the hydrolytic and synthetic mode of the enzyme. Two techniques were applied: a photochemical ATP concentration jump on a planar lipid membrane and a rapid solution exchange on a solid supported membrane. We have identified an electrogenic reaction in the reaction cycle of the F(o)F(1)-ATPase that is related to the translocation of the cation through the membrane bound F(o) subcomplex of the ATPase. In addition, we have determined rate constants for the process: For ATP hydrolysis this reaction has a rate constant of 15-30 s(-1) if H(+) is transported and 30-60 s(-1) if Na(+) is transported. For ATP synthesis the rate constant is 50-70 s(-1).
- Published
- 2003
- Full Text
- View/download PDF
97. Reduction of cytochrome c oxidase by a second electron leads to proton translocation.
- Author
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Ruitenberg M, Kannt A, Bamberg E, Fendler K, and Michel H
- Subjects
- Biological Transport, Catalysis, Cell Respiration, Electron Transport Complex IV chemistry, Electron Transport Complex IV genetics, Electrons, Liposomes chemistry, Membrane Potentials, Models, Molecular, Mutation, Oxidation-Reduction, Oxygen metabolism, Paracoccus denitrificans metabolism, Photolysis, Protein Conformation, Proteolipids metabolism, Protons, Time Factors, Water metabolism, Electron Transport Complex IV metabolism, Liposomes metabolism, Paracoccus denitrificans enzymology
- Abstract
Cytochrome c oxidase, the terminal enzyme of cellular respiration in mitochondria and many bacteria, reduces O(2) to water. This four-electron reduction process is coupled to translocation (pumping) of four protons across the mitochondrial or bacterial membrane; however, proton pumping is poorly understood. Proton pumping was thought to be linked exclusively to the oxidative phase, that is, to the transfer of the third and fourth electron. Upon re-evaluation of these data, however, this proposal has been questioned, and a transport mechanism including proton pumping in the reductive phase--that is, during the transfer of the first two electrons--was suggested. Subsequently, additional studies reported that proton pumping during the reductive phase can occur, but only when it is immediately preceded by an oxidative phase. To help clarify the issue we have measured the generation of the electric potential across the membrane, starting from a defined one-electron reduced state. Here we show that a second electron transfer into the enzyme leads to charge translocation corresponding to pumping of one proton without necessity for a preceding turnover.
- Published
- 2002
- Full Text
- View/download PDF
98. Evidence for intraprotein charge transfer during the transport activity of the melibiose permease from Escherichia coli.
- Author
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Ganea C, Pourcher T, Leblanc G, and Fendler K
- Subjects
- Biological Transport drug effects, Enzyme Inhibitors pharmacology, Ethylmaleimide pharmacology, Signal Transduction, Sodium metabolism, Substrate Specificity, Escherichia coli enzymology, Melibiose metabolism, Monosaccharide Transport Proteins metabolism, Symporters metabolism
- Abstract
Electrogenic activity associated with the activity of the melibiose permease (MelB) of Escherichia coli was investigated by using proteoliposomes containing purified MelB adsorbed onto a solid-supported membrane. Transient currents were selectively recorded by applying concentration jumps of Na+ ions (or Li+) and/or of different sugar substrates of MelB (melibiose, thio-methyl galactoside, raffinose) using a fast-flow solution exchange system. Characteristically, the transient current response was fast, including a single decay exponential component (tau approximately 15 ms) on applying a Na+ (or Li+) concentration jump in the absence of sugar. On imposing a Na+ (or Li+) jump on proteoliposomes preincubated with the sugar, a sugar jump in a preparation preincubated with the cation, or a simultaneous jump of the cation and sugar substrates, the electrical transients were biphasic and comprised both the fast and an additional slow (tau approximately 350 ms) decay components. Finally, selective inactivation of the cosubstrate translocation step by acylation of MelB cysteins with N-ethyl maleimide suppressed the slow response components and had no effect on the fast transient one. We suggest that the fast transient response reflects charge transfer within MelB during cosubstrate binding while the slow component is associated with charge transfer across the proteoliposome membrane. From the time course of the transient currents, we estimate a rate constant for Na+ binding in the absence and presence of melibiose of k > 50 s(-1) and one for melibiose binding in the absence of Na+ of k approximately 10 s(-1).
- Published
- 2001
- Full Text
- View/download PDF
99. Electrogenic properties of the Na+,K+-ATPase probed by presteady state and relaxation studies.
- Author
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Bamberg E, Clarke RJ, and Fendler K
- Subjects
- Electric Conductivity, Fluorescent Dyes analysis, Patch-Clamp Techniques, Pyridinium Compounds analysis, Styrenes analysis, Electrophysiology methods, Sodium-Potassium-Exchanging ATPase metabolism
- Abstract
Electrical measurements on planar lipid bilayers, patch/voltage clamp experiments, and spectroscopic investigations involving a potential sensitive dye are reviewed. These experiments were performed to analyze the kinetics of charge translocation of the Na+,K+-ATPase. High time resolution was achieved by applying caged ATP, voltage-jump, and stopped-flow techniques, respectively. Kinetic parameters and the electrogenicity of the relevant transitions in the Na+,K+-ATPase reaction cycle are discussed.
- Published
- 2001
- Full Text
- View/download PDF
100. Na(+) transport, and the E(1)P-E(2)P conformational transition of the Na(+)/K(+)-ATPase.
- Author
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Babes A and Fendler K
- Subjects
- Adenosine Triphosphate metabolism, Animals, Biophysical Phenomena, Biophysics, Digitoxigenin pharmacology, Electrochemistry, Hydrogen-Ion Concentration, In Vitro Techniques, Ion Transport, Ionophores pharmacology, Kinetics, Lipid Bilayers chemistry, Models, Biological, Monensin pharmacology, Photolysis, Protein Conformation, Signal Transduction drug effects, Swine, Thermodynamics, Sodium metabolism, Sodium-Potassium-Exchanging ATPase chemistry, Sodium-Potassium-Exchanging ATPase metabolism
- Abstract
We have used admittance analysis together with the black lipid membrane technique to analyze electrogenic reactions within the Na(+) branch of the reaction cycle of the Na(+)/K(+)-ATPase. ATP release by flash photolysis of caged ATP induced changes in the admittance of the compound membrane system that are associated with partial reactions of the Na(+)/K(+)-ATPase. Frequency spectra and the Na(+) dependence of the capacitive signal are consistent with an electrogenic or electroneutral E(1)P <--> E(2)P conformational transition which is rate limiting for a faster electrogenic Na(+) dissociation reaction. We determine the relaxation rate of the rate-limiting reaction and the equilibrium constants for both reactions at pH 6.2-8.5. The relaxation rate has a maximum value at pH 7.4 (approximately 320 s(-1)), which drops to acidic (approximately 190 s(-1)) and basic (approximately 110 s(-1)) pH. The E(1)P <--> E(2)P equilibrium is approximately at a midpoint position at pH 6.2 (equilibrium constant approximately 0.8) but moves more to the E(1)P side at basic pH 8.5 (equilibrium constant approximately 0.4). The Na(+) affinity at the extracellular binding site decreases from approximately 900 mM at pH 6.2 to approximately 200 mM at pH 8.5. The results suggest that during Na(+) transport the free energy supplied by the hydrolysis of ATP is mainly used for the generation of a low-affinity extracellular Na(+) discharge site. Ionic strength and lyotropic anions both decrease the relaxation rate. However, while ionic strength does not change the position of the conformational equilibrium E(1)P <--> E(2)P, lyotropic anions shift it to E(1)P.
- Published
- 2000
- Full Text
- View/download PDF
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