192 results on '"Demir, U."'
Search Results
52. Electrochemistry of Cd at (√3×√3)R30°-S/Au(111): Kinetics of Structural Changes in CdS Monolayers
- Author
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Demir, U. and Shannon, C.
- Abstract
Atomic layers of Cd can be adsorbed onto the (√3 × √3)R30°−S/Au(111) surface at underpotential. We have investigated the kinetics of Cd monolayer formation and dissolution at this surface using cyclic voltammetry and chronoamperometry. Scan rate dependent cyclic voltammetry experiments reveal that the peak current in the Cd UPD wave is not a linear function of the scan rate, ν, but scales as ν2/3. Similar behavior is observed when the Cd monolayer is stripped from the surface. These results are characteristic of monolayer formation and dissolution by a nucleation and two-dimensional growth mechanism. Chronoamperometry experiments reveal that both the deposition and stripping of Cd involve two steps: an initial Langmuir-type adsorption−desorption process accompanied by nucleation and two-dimensional growth. CdS monolayer growth kinetics are strongly influenced by the chemisorption of Cd on the S-modified Au(111) substrate, which both increases its rate of adsorption and decreases the rate of lattice growth. The kinetics of monolayer dissolution are characterized by a very large random desorption component which is attributed to formation of CdS.
- Published
- 1996
53. Electrochemistry of S Adlayers at Underpotentially Deposited Cd on Au(111): Implications for the Electrosynthesis of High-Quality CdS Thin Films
- Author
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Gichuhi, A., Boone, B. E., Demir, U., and Shannon, C.
- Abstract
We report an electrochemical, scanning probe microscopic, and Raman spectroscopic investigation of thin CdS films grown by electrochemical atomic layer epitaxy aimed at understanding the role played by the order of deposition on film quality. Using scanning tunneling microscopy (STM), we determine the atomic level structure of the first three monolayers of CdS for Cd-first films. The initial Cd underpotential deposition layer forms a stable (
%@mt;sys@% %@sx@%0%@be@%4%@sxx@%%@mx@% )−Au(111) adlattice in which the two unique nearest neighbor spacings are 0.33 and 0.29 nm. When H%@mt;sys@% %@sx@%1%@be@%-2%@sxx@%%@mx@% 2 S is electrolyzed at this surface at underpotential, an adlattice is produced in which the S−S interatomic spacing is 0.34 nm. The unit cell of this structure is (%@mt;sys@% %@sx@%0%@be@%4%@sxx@%%@mx@% ) with respect to Au(111). Both the Cd and S monolayers appear to be nearly closest-packed, in contrast to the more open structures observed in the S-first films. Interestingly, the second monolayers of Cd and S were found to have the same structure as in the first monolayer of CdS, implying that the first two CdS monolayers are epitaxial. Only after deposition of the third monolayer of CdS are interatomic spacings characteristic of bulk CdS observed. Micrometer-resolution STM images reveal a significant decrease in pit density, average pit diameter, and average pit depth for the Cd-first films compared to that for the S-first films. Finally, resonance Raman data indicate that S-first films are significantly more polydisperse than Cd-first films. Taken together, these data point to a structural rearrangement in the first monolayer of CdS as the origin of the increased polycrystallinity in the S-first films. In contrast, the closest-packed structures formed when Cd is deposited first lead to films with fewer defects. The implications of these findings on the electrosynthesis of thin film materials is briefly discussed.%@mt;sys@% %@sx@%2%@be@%-2%@sxx@%%@mx@% - Published
- 1998
54. Electrochemical Atom-by-Atom Growth of PbS by Modified ECALE Method
- Author
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Oznuluer, T., Erdogan, I., Sisman, I., and Demir, U
- Published
- 2005
55. The application of Jameson flotation column for the beneficiation of TunÇbilek washery tailings
- Author
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Uçar, A., Öteyaka, B., Yamik, A., Sahbaz, O., Demir, U., and Bulent Yilmaz
- Abstract
The Presidency Turkish National Assembly;Ministry of Energy and Natural Resources;Municipality of Istanbul;Setat Mining Co.;Tuprag Mining Co., 23rd International Mineral Processing Congress, IMPC 2006 -- 3 September 2006 through 8 September 2006 -- Istanbul -- 100097, Fine-grained coals with high-ash contents from the tailings of coal washeries are disposed of due to the economical and technological reasons. These cause serious environmental problems and economical losses. In this study, the beneficiation of -212 µm coal obtained from the fine-grained tailings of Tuncbilek Washery (-1,18 mm) and discharges in the slurry pond from thickener underflow was investigated by the flotation method. In the flotation experiments, Jameson flotation column of laboratory scale, which is commonly used in the world, but industrially-unavailable in Turkey, was applied. From the results of this work, clean coal products with 18.3% ash content were obtained from the coal samples with 48.7% ash contents at a combustible recovery of 90 %.
56. How does the extent of antral resection affect the residual gastric volume and excessive weight loss?
- Author
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Ömeroğlu, S., EMRE BOZKURT, Kaya, C., Demir, U., Bostancı, Ö, Yazıcı, P., and Mihmanlı, M.
57. The effects of dodecylamine, kerosene and pH on batch flotation of Turkey’s Tuncbilek coal.
- Author
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Kelebek S., Cinar M., Demir U., Karaguzel C. Oteyaka B., Sahbaz O., Ucar A., Kelebek S., Cinar M., Demir U., Karaguzel C. Oteyaka B., Sahbaz O., and Ucar A.
- Abstract
The recovery of combustible matter and the ash content were studied of a lignitic coal using a three-variable and two-level factorial experimental design. High recoveries of more than 95% were obtained in batch flotation tests using kerosene and dodecylamine. The main effects of all three factors on recovery were positive. The use of dodecylamine as collector had a more significant effect than that of kerosene, but its selectivity in relation to ash reduction was not significant at the 95% confidence level. Recovery using dodecylamine was lowest at pH 9.4 which was related to the precipitation of cationic species of the collector. The kerosene-induced recovery and grade of combustible matter increased with pH, attributed to a better dispersion of coal and associated clays. The main and interactive effects are discussed with reference to adsorption at the most favourable surface sites, the orientation of dodecylamine species, competition with kerosene and the probable collector properties of the frother., The recovery of combustible matter and the ash content were studied of a lignitic coal using a three-variable and two-level factorial experimental design. High recoveries of more than 95% were obtained in batch flotation tests using kerosene and dodecylamine. The main effects of all three factors on recovery were positive. The use of dodecylamine as collector had a more significant effect than that of kerosene, but its selectivity in relation to ash reduction was not significant at the 95% confidence level. Recovery using dodecylamine was lowest at pH 9.4 which was related to the precipitation of cationic species of the collector. The kerosene-induced recovery and grade of combustible matter increased with pH, attributed to a better dispersion of coal and associated clays. The main and interactive effects are discussed with reference to adsorption at the most favourable surface sites, the orientation of dodecylamine species, competition with kerosene and the probable collector properties of the frother.
58. Reconstruction of Cadmium Sulfide Monolayers on Au(100)
- Author
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Demir, U. and Shannon, C.
- Published
- 1996
59. Postoperative adhesion formation following ovarian reconstruction with fibrin glue in the rabbit.
- Author
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Bilgin, Tufan, Cengiz, Canaan, Demir, Ufuk, Bilgin, T, Cengiz, C, and Demir, U
- Published
- 1995
- Full Text
- View/download PDF
60. ChemInform Abstract: Electrochemistry of S Adlayers at Underpotentially Deposited Cd on Au(111): Implications for the Electrosynthesis of High-Quality CdS Thin Films.
- Author
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GICHUHI, A., BOONE, B. E., DEMIR, U., and SHANNON, C.
- Published
- 1998
- Full Text
- View/download PDF
61. An Innovative Approach to Electrical Motor Geometry Generation Using Machine Learning and Image Processing Techniques
- Author
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Ugur Demir, Gazi Akgun, Mustafa Caner Akuner, Majid Pourkarimi, Omer Akgun, Tahir Cetin Akinci, and DEMİR U., AKGÜN G., AKÜNER M. C., Pourkarimi M., AKGÜN Ö., Akıncı T. Ç.
- Subjects
Optimization ,Artificial neural network ,Interior Permanent Magnet Motor ,General Computer Science ,Mühendislik ,ENGINEERING ,Geometry ,Permanent magnet motors ,MATERIALS SCIENCE ,Feature Extraction ,Machine Learning ,Traction motors ,Genel Mühendislik ,Image Generation ,General Materials Science ,Bilgisayar Bilimleri ,Electrical and Electronic Engineering ,Engineering, Computing & Technology (ENG) ,Genel Bilgisayar Bilimi ,Reluctance motors ,Computer Sciences ,Electric motors ,General Engineering ,Mühendislik, Bilişim ve Teknoloji (ENG) ,COMPUTER SCIENCE ,2D Filter ,Fizik Bilimleri ,Torque ,Physical Sciences ,Genel Malzeme Bilimi ,Engineering and Technology ,Bilgisayar Bilimi ,Mühendislik ve Teknoloji ,Malzeme Bilimi - Abstract
This paper presents a methodology for generating geometries for interior permanent magnet (IPM) motors in electric vehicles (EVs) through the application of artificial intelligence (AI) and image processing (IP) techniques. Due to the implementation of green agreements and policies aimed at reducing greenhouse gas emissions, EVs have become popularity. As a consequence, the improvement studies on the powertrain and battery system of EVs are focused. Especially for the powertrain, design optimization studies of e-motor have increased in the literature. One of the most widely used e-motor topologies is interior permanent magnet (IPM) motor. However, designing the IPM motor presents a challenge due to the dynamic considerations with geometric constraints. Therefore, e-motor designers encounter challenges related to determining initial geometry and the long time of the optimization process. To address these challenges, a novel approach is proposed that leverages machine learning (ML) techniques in combination with IP to generate initial geometries and design parameters for IPM motors. The proposed approach generates images of the motor geometry and extract dimensional features from the resulting images by using artificial neural networks (ANNs). The proposed method performs an analysis of the input vectors to reduce their size using techniques such as Histogram, 2D Maximum, 2D Mean, 2D Minimum, 2D Standard Deviation, and 2D Variance to enhance feature extraction. Additionally, FFT (Fast Fourier Transform) and IFFT (Inverse Fast Fourier Transform) are used to improve the neural network process in generating the image geometry. Further, the generated image geometry is improved by applying digital filtering techniques such as Log, FFT, Log+FFT, Laplacian, Sobel, and Histogram Equalization. Finally, the trained ANNs are tested to validate the results by using Ansys RMXprt and Maxwell. Eventually, the proposed method represents an innovative solution to generating initial geometries for IPM motors in EVs that satisfies desired design requirements. This approach leverages the power of AI and image processing techniques, which could lead to significant improvements in the optimization process for IPM motors, accelerate the designer’s analysis process, and enhance the performance of EVs.
- Published
- 2023
62. Neural network and IoT-based test maneuver deployment for 2 DoF vehicle simulator
- Author
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Bora Demirci, Uğur Demir, Gazi Akgün, Alper Yıldırım, Mesutcan Özkan, Mustafa Caner Aküner, and DEMİRCİ B., DEMİR U., AKGÜN G., YILDIRIM A., AKÜNER M. C., ÖZKAN M.
- Subjects
IoT ,test maneuver ,neural network ,driving scenario ,vehicle simulator - Abstract
This paper presents the driving scenarios deployment for 2 DoF (Degree of Freedom) vehicle simulator based on IoT (Internet of Things) and Neural Network. The controller structure is chosen as Neural Network-based controller is preferred as the transferring appropriate accelerations in 3 axes in the 2 DoF manipulator evokes a nonlinear problem. Due to the microcontroller used in the vehicle simulator to perform Neural Network calculations has limited processing capacity and speed, IoT-based computing and data transferring are chosen. Firstly, an open-loop measurement is performed to identify the vehicle simulator and to generate the training data for the neural network. Thereafter the acceleration data on the axes and the control signals are logged. Secondly, the neural network training is carried out with the logged data. Finally, the trained neural network was tested with various driving maneuvers. And the measurements are evaluated.
- Published
- 2023
63. Feature extraction and NN-based enhanced test maneuver deployment for 2 DoF vehicle simulator
- Author
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Uğur Demir, Gazi Akgün, Mustafa Caner Aküner, Bora Demirci, Omer Akgun, Tahir Cetin Akinci, and DEMİR U., AKGÜN G., AKÜNER M. C., Demirci B., AKGÜN Ö., Akıncı T. Ç.
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Internet of things ,General Computer Science ,Neural Networks ,Sinyal İşleme ,Mühendislik ,ENGINEERING ,MATERIALS SCIENCE ,Information Systems, Communication and Control Engineering ,Genel Mühendislik ,General Materials Science ,Bilgisayar Bilimleri ,Electrical and Electronic Engineering ,Engineering, Computing & Technology (ENG) ,System identification ,Genel Bilgisayar Bilimi ,Vehicle Simulator ,ENGINEERING, ELECTRICAL & ELECTRONIC ,Training data ,Artificial neural networks ,Computer Sciences ,Elektrik ve Elektronik Mühendisliği ,General Engineering ,Data models ,Mühendislik, Bilişim ve Teknoloji (ENG) ,COMPUTER SCIENCE ,Fizik Bilimleri ,Signal Processing ,Physical Sciences ,Genel Malzeme Bilimi ,Engineering and Technology ,Bilgisayar Bilimi ,Feature extraction ,MÜHENDİSLİK, ELEKTRİK VE ELEKTRONİK ,Mühendislik ve Teknoloji ,Bilgi Sistemleri, Haberleşme ve Kontrol Mühendisliği ,Actuators ,Malzeme Bilimi - Abstract
This paper presents a deployment method of various test maneuver scenarios for 2 degree of freedom (2 DoF) vehicle simulator by using feature extraction and neural networks (NN). A prototype version has been set up for the 2 DoF vehicle simulator. Then, a hardware in the loop (HIL) model with 2 inputs (torque, τ1-τ2) and 3 outputs (acceleration, ax-ay-az) is created. System identification is performed to obtain the training data of NNs to be used for the deployment of test maneuvers. In the system identification process, 2 arbitrary sinusoidal torque signals (τ1-τ2) are generated by using the actuator specs of the 2 DoF vehicle simulator. By applying the generated torque signals to the actuators, acceleration (ax-ay-az) data are collected from the inertial measurement sensor (IMU) on the 2 DoF vehicle simulator. It is determined to create 3 different NN models for the obtained data. The 1st NN model is trained with 3 inputs (ax-ay-az) and 2 targets (τ1-τ2) training data. The 2nd NN model is trained with 6 inputs (amplitudes and phases of ax-ay-az) and 2 targets (τ1-τ2) training data. The input data features for the 2nd NN model is extracted by using the Fast Fourier Transform (FFT). The 3rd NN model is trained with 6 inputs (amplitudes and phases of ax-ay-az) and 4 targets (amplitudes and phases of τ1-τ2) training data. For the 3rd NN model, the features of input and target data are extracted by using the FFT. The NN training process continues until acceptable performance criteria are reached. Then, 3 NN models are run and analyzed under various test scenarios such as Double Lane Change, Constant Radius, Increase Steer, Fish Hook, Sine with Dwell and Swept Sine. Only for the 3rd NN, the actuator signals (τ1-τ2) are recomposed by applying an inverse FFT process to the 4 targets (amplitudes and phases of τ1-τ2). Finally, the reference trajectory tracking performances are evaluated by comparing the NN models that are run under the test scenarios.
- Published
- 2023
64. Investigation on different driving cycle and scenarios considering the autonomous electric vehicles
- Author
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Uğur DEMİR, Zeliha KAMIŞ KOCABIÇAK, and DEMİR U., KAMIŞ KOCABIÇAK Z.
- Subjects
Driving Scenario ,Engineering, Electrical and Electronic ,Steering and Traction Dynamics ,Autonomous Vehicle ,Mühendislik, Elektrik ve Elektronik ,Driving cycle ,General Agricultural and Biological Sciences - Abstract
This study presents a series of analyzes considering the traction and steering demands of an autonomous electric vehicle (AEV) as a shuttle. The considered analyzes in here are dealt with as driving cycle (DC) and driving scenarios (DS) to assess the traction and steering performance of the AEV. The aim of this study is to evaluate the issues such as over engineering for AEV traction and steering motor requirements on a certain route by comparatively analyzing traditional and dynamic calculation under the DC and DS. Therefore, DC and DS in the lit-erature are evaluated in terms of different applications, optimization techniques, generation algorithm, parametric characterization, e-motor type etc. Afterwards, NEDC, US06, WLTC, Double Lane Change (DLC), Constant Radius (CR) and Slowly Increase Steer (SIS) are determined. Then, they are arranged according to the vehicle-specific limits on an electric golf car. The modified DCs and DSs are run on the dynamic model of the vehicle. In the performed analysis, the parame-ters such as reference trajectory tracking, yaw angle, tractive and steering forces, lateral and longitudinal displacement-acceleration, steering and traction motor power–speed-torque are investigated. And the obtained results are evaluated by comparing the traditional calculation results.
- Published
- 2022
65. EMG Sinyallerinin HFD Analizi ve Hareket Sınıflandırılması
- Author
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Gazi AKGÜN, Uğur DEMİR, Alper YILDIRIM, and AKGÜN G., DEMİR U.
- Subjects
FFT Analysis ,sEMG ,Haraket Sınıflandırma ,Motion Classification ,HFD Analizi - Abstract
Bu çalışmada EMG sinyallerinin frekans analizi yapılarak elde edilen veriler ile hareket sınıflandırması yapmak amaçlanmıştır. Üç kanaldan toplanan EMG sinyalleri uygun pencerelere ayrılarak her bir pencereye” hilbert “ zarflama yöntemi uygulanmış ve FFT katsayıları hesaplanmıştır. Kaydedilen EMG sinyallerinin frekans spektrumları incelenmiştir. Bu katsayıları ile bir sınıflandırma algoritmasında kullanmak amacıyla her bir pencerenin ağırlıklı frekans bileşeni hesaplanmıştır. Elde edilen veriler YSA (Yapay sinir Ağları) algoritmasının eğitilmesi amacıyla kullanılmış ve bu işlem EMG sinyallerinin sınıflandırılması amacıyla kullanılmıştır. Sınıflandırma işlemi sonucunda özellikle aynı kas gruplarındaki kasılma kuvvetleri ile birbirinden ayırt edilebilen hareketlerin yalnızca frekans domeninde değil zaman domeninde de incelenmesi gerektiği sonucuna varılmıştır. In this study, it is aimed to make motion classification with the data obtained by frequency analysis of EMG signals. The EMG signals collected from three channels were divided into appropriate windows, and the "hilbert" envelope method was applied to each window and the FFT coefficients were calculated. The frequency spectrums of the recorded EMG signals were examined. With these coefficients, the weighted frequency component of each window was calculated in order to use it in a classification algorithm. The obtained data were used to train the ANN (Artificial Neural Networks) algorithm and this process was used to classify the EMG signals. As a result of the classification process, it was concluded that the movements that can be distinguished from each other by the contraction forces in the same muscle groups should be examined not only in the frequency domain but also in the time domain.
- Published
- 2022
66. EMG sinyallerinin derin öğrenme ile hareket sınıflandırması
- Author
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AKGÜN, GAZİ, YILDIRIM, ALPER, DEMİR, UĞUR, KAPLANOĞLU, ERKAN, and Akgün G., Yıldırım A., Demir U., Kaplanoğlu E.
- Subjects
COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE ,İnsan Bilgisayar Etkileşimi ,Neural Networks ,General Computer Science ,Örüntü Tanıma ve Görüntü İşleme ,Mühendislik ,Sinyal İşleme ,ENGINEERING ,COMPUTER SCIENCE, CYBERNETICS ,Yapay Zeka, Bilgisayarda Öğrenme ve Örüntü Tanıma ,Artificial Intelligence, Computer Learning and Pattern Recognition ,BİLGİSAYAR BİLİMİ, YAPAY ZEKA ,Elektrik-Elektronik Mühendisliği ,Elektronik ,Bilgisayarla Görme ve Örüntü Tanıma ,Yapay Zeka ,Artificial Intelligence ,Pattern Recognition and Image Processing ,Sinirsel Ağlar ,Electronic ,Computer Science (miscellaneous) ,Bilgisayar Bilimleri ,Electrical and Electronic Engineering ,Engineering, Computing & Technology (ENG) ,Genel Bilgisayar Bilimi ,Electrical and Electronics Engineering ,Bilgisayar Bilimi Uygulamaları ,ENGINEERING, ELECTRICAL & ELECTRONIC ,Computer Sciences ,Elektrik ve Elektronik Mühendisliği ,Mühendislik, Bilişim ve Teknoloji (ENG) ,Human Computer Interaction ,COMPUTER SCIENCE ,BİLGİSAYAR BİLİMİ, SİBERNETİK ,Computer Science Applications ,Bilgisayar Bilimi (çeşitli) ,Fizik Bilimleri ,Signal Processing ,Physical Sciences ,Engineering and Technology ,Bilgisayar Bilimi ,MÜHENDİSLİK, ELEKTRİK VE ELEKTRONİK ,Mühendislik ve Teknoloji ,Computer Vision and Pattern Recognition - Abstract
Bu çalışmada EMG sinyalleri üzerinde öznitelikler hesaplanmıştır. Bu öznitelikler ile el hareketlerini sınıflandırmak için derin öğrenme algoritmaları kullanılmıştır. Bir zaman serisi olarak toplanan EMG sinyalleri üzerinde zaman alanında hesaplanan öznitelik vektörleri belirli boyutlarda simetrik matrisler olarak kaydedilmiştir. Yeniden oluşturulan ve resim dosyası formatında kaydedilen veri seti ile Evrişimsel Sinir Ağı eğitilmiştir. Bu eğitim sonucunda tüm veriler ile %93, test verileri ile %79 başarı ile hareket sınıflandırması gerçekleştirilmiştir. In this study, the statistical features are calculated with EMG signals. Deep learning algorithms are used to classify hand gestures with these features. the feature vectors calculated in the time domain using the EMG signals recorded as a time series are stored as symmetric matrices with specific sizes. The data set that is rebuilt and saved as image file format is used to train the convolutional neural network. Thereafter the training, motion classification is carried out with a success rate of 93% for all data and 79% for test data
- Published
- 2022
67. Hatt-ı hümâyûnlar neden yakılırdı
- Author
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DEMİR, UĞUR and Demir U.
- Subjects
Tarih ,Yeniçağ Tarihi ,History ,Social Sciences and Humanities ,Social Sciences (SOC) ,Sosyal Bilimler ve Beşeri Bilimler ,Sanat ve Beşeri Bilimler ,Sanat ve Beşeri Bilimler (AHCI) ,Modern History ,Arts & Humanities (AHCI) ,Sosyal Bilimler (SOC) ,TARİH ,Sosyal ve Beşeri Bilimler ,Social Sciences & Humanities ,ARTS & HUMANITIES - Abstract
Osmanlı tarihine dair en önemli belge gruplarından birini oluşturan hatt-ı hümâyûnlar ile ilgili çalışmalar hâlâ başlangıç seviyesindedir. Araştırmalar ilerledikçe yeni bilgilerin tespit edileceği aşikârdır. Bu çalışmada hatt-ı hümâyûnlarla ilgili bazı tartışmalı hususlar üzerinde duruldu. Bu bağlamda öncelikle \"hatt-ı hümâyûnun\" nasıl tarif edileceği ele alındı. Ardından hatt-ı hümâyûnların birkısmının neden kesildikleri tartışmasına temas edildi. Çalışmanın asıl meselesi ise hatt-ı hümâyûnların neden yakıldığı oldu. Özellikle III. Mustafa döneminde gizli kalması istenen hatt-ı hümâyûnların yakıldığı veya yakılması istendiğini tespit edilerek değerlendirildi.
- Published
- 2022
68. The washability of lignites for clay removal
- Author
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Demir, U [Dumlupinar University, Kutahya (Turkey). Dept. of Mining Engineering]
- Published
- 2008
- Full Text
- View/download PDF
69. Experimental and Stochastic Reactor Modeling Results of an HCCI Engine Fueled with Primary Reference Fuel
- Author
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Usame Demir, Halit Yasar, E. Usta, Yasar, H, Usta, E, Demir, U, Sakarya Üniversitesi/Mühendislik Fakültesi/Makine Mühendisliği Bölümü, Yaşar, Halit, Usta, Emel, and Demir, Ümmühan
- Subjects
Atmospheric pressure ,Noise (signal processing) ,General Chemical Engineering ,Nuclear engineering ,Homogeneous charge compression ignition ,Energy Engineering and Power Technology ,Compression (physics) ,Combustion ,Cylinder pressure ,Engineering ,Fuel Technology ,Fuel efficiency ,Environmental science ,Full cycle - Abstract
In recent years, much research has been performed in order to decrease fuel consumption, noise, and exhaust emission levels in internal combustion engines. In this study, the effects of excess air coefficient on performance and exhaust emissions (CO, CO2) of an HCCI engine fueled with primary reference fuel (PRF) were investigated for different intake air pressure and temperature values. The simulation studies were performed by using SRM Suite software. The chemical kinetic mechanism, which contains 138 species and 633 reactions that are embedded into the program, was used to simulate the combustion of the PRF fuel during the combustion simulations. The analysis covers the full cycle and provides data about induction, compression, combustion, expansion, and exhaust. The exhaust emissions, cylinder pressure, and heat release rate results were compared with the experimental data. The zero-dimensional software (SRM Suite) gives quite reasonable results compared with the experimental data, and it has advantages such as the shorter solution time and the unlimited chemical kinetic mechanism compared with the three-dimensional combustion simulation software.
- Published
- 2018
70. Analysis of an HCCI engine combustion using toluene reference fuel for different equivalence ratios - Comparison of experimental results with CFD and SRM simulations
- Author
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Usame Demir, Yusuf Delil, Gökhan Coşkun, Coskun, G, Delil, Y, Demir, U, Sakarya Üniversitesi/Mühendislik Fakültesi/Makine Mühendisliği Bölümü, and Coşkun, Gökhan
- Subjects
Cfd simulation ,Materials science ,business.industry ,020209 energy ,General Chemical Engineering ,Homogeneous charge compression ignition ,Nuclear engineering ,Organic Chemistry ,Hcci combustion ,Energy Engineering and Power Technology ,02 engineering and technology ,Computational fluid dynamics ,Kinetic energy ,Combustion ,Toluene ,chemistry.chemical_compound ,Fuel Technology ,Engineering ,020401 chemical engineering ,chemistry ,0202 electrical engineering, electronic engineering, information engineering ,0204 chemical engineering ,business ,Equivalence (measure theory) - Abstract
In this study; performance of 0-D and Computational Fluid Dynamics (CFD) software with two different chemical mechanisms are investigated in an HCCI engine using toluene reference fuel (79% toluene and 21% n-heptane). For 0-D simulations, stochastic reactor model (SRM) has been used. SRM and CFD software were compared to each other for HCCI engine simulation by investigating in-cylinder pressure variations, Heat Release Rate (HRR) and emissions. For toluene reference fuel, a semi-detailed and a reduced chemical kinetic mechanisms were used during the simulations. It is observed that CFD and SRM simulations with reduced mechanism give better results for capturing pressure and HRR for lower lambda (λ) values. But only CFD simulation with reduced mechanism could capture the experimental pressure and HRR results for higher lambda (λ) values. On the other hand semi-detailed mechanism could predict early cold combustion reactions for all simulation strategies. It could be say that all simulation approaches with two different mechanism have almost similar results for HCCI combustion emissions.
- Published
- 2019
71. An Experimental and Modeling Study to Investigate Effects of Two-Stage Direct Injection Variations on HCCI Combustion
- Author
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Gökhan Coşkun, Ali Turkcan, Hakan Serhad Soyhan, Usame Demir, Mustafa Canakci, Ahmet Necati Ozsezen, Turkcan, A, Ozsezen, AN, Canakci, M, Coskun, G, Soyhan, HS, Demir, U, Sakarya Üniversitesi/Mühendislik Fakültesi/Makine Mühendisliği Bölümü, Coşkun, Gökhan, and Soyhan, Hakan Serhad
- Subjects
Materials science ,General Chemical Engineering ,Nuclear engineering ,Homogeneous charge compression ignition ,General Physics and Astronomy ,Energy Engineering and Power Technology ,General Chemistry ,Combustion ,Fuel injection ,Diesel engine ,law.invention ,Ignition system ,Engineering ,Fuel Technology ,law ,Compression ratio ,Gasoline ,Petrol engine - Abstract
In this study, homogenous charge compression ignition (HCCI) combustion with two-stage direct injection (TSDI) strategies was modeled with stochastic reactor model (SRM) and validated by using the experimental results of the TSDI gasoline HCCI engine. For the experimental study, a diesel engine was converted to an electronically controlled HCCI gasoline engine. The effects of injection timings and injection ratios on the HCCI combustion characteristics were studied at high equivalence ratio and constant engine speed. The injection timings (first and second) and fuel quantity for each injection were adjusted to get desired mixture formation in the cylinder. During the experiments, the maximum cylinder gas pressure, pressure rise rate and start of combustion were directly controlled by using the second fuel injection timing and injection ratio. Using optimal second fuel injection timing and injection ratio caused a reduction on NOx and HC emissions. The model results of the HCCI combustion were in good agreement with the experimental results. Both of the experimental and modeling results showed that the second fuel injection timing had a strong effect on the HCCI combustion when compared to the first injection timing.
- Published
- 2015
72. Computational investigation of combustion and emission characteristics of toluene reference fuel (TRF) mixtures in an HCCI engine using stochastic reactor model
- Author
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N. Yilmaz, Usame Demir, Gökhan Coşkun, Hakan Serhad Soyhan, Coskun, G, Demir, U, Yilmaz, N, Soyhan, HS, Sakarya Üniversitesi/Mühendislik Fakültesi/Makine Mühendisliği Bölümü, Coşkun, Gökhan, Yılmaz, Neslihan, and Soyhan, Hakan Serhad
- Subjects
Materials science ,020209 energy ,Mechanical Engineering ,Applied Mathematics ,Homogeneous charge compression ignition ,Nuclear engineering ,General Engineering ,Aerospace Engineering ,02 engineering and technology ,Combustion ,Kinetic energy ,Toluene ,Industrial and Manufacturing Engineering ,chemistry.chemical_compound ,Engineering ,020401 chemical engineering ,chemistry ,Automotive Engineering ,0202 electrical engineering, electronic engineering, information engineering ,0204 chemical engineering ,Physics::Chemical Physics ,Simulation ,Parametric statistics - Abstract
In this study, a homogeneous charge compression ignition (HCCI) engine was fueled with primary reference fuel (PRF) and toluene mixture using a zero-dimensional simulation code called stochastic reactor model (SRM) for simulations. A mixture of the PRF with Toluene fuel known as toluene reference fuel (TRF) was simulated using a skeletal kinetic mechanism consisting of 137 species and 633 reactions. Experimental results were used to validate SRM simulations' accuracy. Acceptable agreement was found between the computational results and the experimental data. Furthermore, parametric studies of experimentally validated simulation were performed to understand the effects of TRF blends, various initial conditions and fuel/air equivalence ratios (phi) on combustion and emission characteristics of the HCCI engine, to help with engine control strategies.
- Published
- 2017
73. Evaluation of zero dimensional codes in simulating IC engines using primary reference fuel
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Gökhan Coşkun, Nadir Yilmaz, Hakan Serhad Soyhan, Ümmühan Demir, Demir, U, Yilmaz, N, Coskun, G, Soyhan, HS, Sakarya Üniversitesi/Sağlık Hizmetleri Meslek Yüksekokulu/Tıbbi Hizmetler Ve Teknikler Bölümü, Demir, Ümmühan, and Coşkun, Gökhan
- Subjects
Work (thermodynamics) ,Engineering ,business.industry ,Nuclear engineering ,Homogeneous charge compression ignition ,Energy Engineering and Power Technology ,Experimental data ,Probability density function ,Combustion ,Mechanics ,Industrial and Manufacturing Engineering ,law.invention ,Ignition system ,law ,Convergence (routing) ,Heat transfer ,Physics::Chemical Physics ,business ,Simulation - Abstract
In this work, experimental results from a homogenous charge compression ignition (HCCI) engine fueled with PRF-85 (85% iso-octane and 15% n-heptane) were used to compare performances of combustion codes for zero dimensional analysis. 0-D codes, called SRM Suite (Stochastic Reactor Model) and Chemkin-Pro, were evaluated in terms of combustion, heat transfer and emissions in an HCCI engine. The simulations are based on experimental data and operating conditions at Shell Research Labs in the UK. One set of experimental data was used for analysis in both programs with reduced and detailed kinetic mechanisms. Simulation results were compared to experimental data in terms of pressure, heat release rate, and emission. Variation of the temperature, OH and H2O2 that could not be obtained experimentally were evaluated for comparisons between the two codes. Analysis showed that both codes have advantages over each other. Crevice and blow-by, ring gap and probability density function (PDF) based stochastic reactor modeling are main advantages of SRM Suite software and these capabilities helped with better convergence of the results. But, Chemkin-Pro results were acceptable and solution time was fairly shorter than SRM Suite. It was also seen that detailed and reduced kinetic mechanisms affected the analysis. (C) 2014 Elsevier Ltd. All rights reserved. https://doi.org/10.1016/j.applthermaleng.2014.10.084
- Published
- 2015
74. Electrochemical growth and characterization of size-quantized CdTe thin films grown by underpotential deposition
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İlkay Şişman, Ümit Demir, Sisman, I, Demir, U, Sakarya Üniversitesi/Fen-Edebiyat Fakültesi/Kimya Bölümü, and Şişman, İlkay
- Subjects
Chemistry ,Scanning electron microscope ,General Chemical Engineering ,Analytical chemistry ,Energy-dispersive X-ray spectroscopy ,Underpotential deposition ,Analytical Chemistry ,Overlayer ,law.invention ,law ,Electrochemistry ,Crystallite ,Thin film ,Scanning tunneling microscope ,Cyclic voltammetry - Abstract
Size-quantized thin films of CdTe were electrosynthesized onto Au(1 1 1) substrates by underpotential deposition (UPD) from an acidic aqueous solution of CdSO(4), and TeO(2). The electrodeposited thin films were characterized by scanning tunneling microscopy (STM), atomic force microscopy (AFM), scanning electron microscopy (SEM), energy dispersive spectroscopy (EDS), X-ray diffraction (XRD), and UV-vis absorption spectroscopy. The electrodeposition mechanism and the codeposition potential of CdTe were explored by cyclic voltammetry. The voltammetric analysis indicates that the electrodeposition of CdTe is a two-step codeposition process under the conditions of UPD. Morphological investigations demonstrate that the film growth proceeds via the formation of a few layers, growth of spherical nanoparticles on the overlayer and then continues by growth to form smooth spherical crystallites of CdTe. XRD results show that the growth of films are highly preferential with (1 1 1) orientation. Optical studies revealed blue shift in band gap energy due to quantum confinement. Crown Copyright (C) 2010 Published by Elsevier B.V. All rights reserved.
- Published
- 2011
75. Acute abdomen due to Meckel's diverticulitis with synchronous inflammatory myofibroblastic tumor in the terminal ileum: A case report.
- Author
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Dinçer B, Ömeroğlu S, Güven O, Celayir MF, and Demir U
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- Humans, Male, Middle Aged, Ileal Neoplasms surgery, Ileal Neoplasms complications, Ileal Neoplasms diagnosis, Ileal Neoplasms pathology, Ileal Neoplasms diagnostic imaging, Diverticulitis complications, Diverticulitis surgery, Diverticulitis diagnosis, Diverticulitis diagnostic imaging, Tomography, X-Ray Computed, Meckel Diverticulum complications, Meckel Diverticulum surgery, Meckel Diverticulum diagnosis, Meckel Diverticulum pathology, Meckel Diverticulum diagnostic imaging, Abdomen, Acute etiology, Abdomen, Acute surgery
- Abstract
Meckel's diverticulum (MD) is the most common congenital anomaly of the gastrointestinal system, occurring in approximately 2% of the population. It is rare for MD to be symptomatic or complicated in adulthood. In this case report, we describe a patient who was admitted to the clinic with Meckel's diverticulitis, which had fistulized to the anterior abdominal wall, and was incidentally found to have an ileal inflammatory myofibroblastic tumor (IMT) on radiological imaging. A 46-year-old male patient presented to the emergency department with abdominal pain. Physical examination revealed localized guarding on the right side of the umbilicus. Blood tests showed elevated acute-phase reactants, including a white blood cell count of 13,800/µL, and C-reactive protein (CRP) level of 165 mg/L. Abdominal computed tomography demonstrated Meckel's diverticulitis fistulizing to the anterior abdominal wall and a polypoid structure in the ileum distal to the MD. The patient underwent emergency surgery, during which segmental ileal resection and ileocolic anastomosis were performed. On the fourth postoperative day, the patient developed an anastomotic leak. Relaparotomy, right hemicolectomy with end ileostomy, and mucous fistula creation were subsequently performed. Pathological examination of the resected ileum from the initial surgery revealed a benign IMT distal to the MD. The patient was discharged on the 40th postoperative day after developing a surgical site infection following the second surgery. The end ileostomy was closed six months later. In this case, it appears that the ileal IMT located distal to the MD may have caused intermittent intestinal obstruction, fecal stasis, and the development of Meckel's diverticulitis. Furthermore, a detailed examination of the patient's history, laboratory results, and radiologic tests may contribute to the detection of incidental pathologies and influence treatment choices.
- Published
- 2024
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76. Factors predict prolonged colonoscopy before the procedure: prospective registry study.
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Dinçer B, Ömeroğlu S, Güven O, Akgün İE, Celayir MF, Gürbulak EK, Yazıcı P, Köksal HM, and Demir U
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- Humans, Female, Male, Middle Aged, Prospective Studies, Aged, Cecum, Time Factors, Adult, Adenoma surgery, Adenoma diagnosis, Colonoscopy methods, Colonoscopy statistics & numerical data, Registries
- Abstract
Background: Colonoscopy difficulty and procedure time can vary between cases, posing challenges for daily scheduling in endoscopy units. In the literature, cecal intubation time (CIT) is commonly used to assess colonoscopy difficulty, yet there is debate regarding the factors influencing CIT. This prospective observational study aimed to evaluate the factors influencing CIT., Methods: In this single-center, prospective, observational study, 915 patients who underwent colonoscopy between July 2023 and April 2024 were evaluated. Failure to achieve cecal intubation due to poor bowel preparation and a history of colorectal surgery were considered as exclusion criteria. Patients with a CIT ≥ 11 min or those with technically failed cecal intubation were categorized into the prolonged CIT subgroup, while those with a CIT < 11 min were analyzed in the normal CIT subgroup. Patients were evaluated based on demographic characteristics, clinical parameters, and colonoscopy results., Results: A total of 902 patients included in the final analysis. The median age was 55 years and 55.4% of them were women. The cecal intubation rate was 97.5% (892 patients). The polyp, adenoma, and malignancy detection rate were 27.4, 20.7, and 1.9%, respectively. Median cecal intubation time (CIT) was 6 min (Interquartile range: 4-8). In multivariate analysis, body mass index ≤ 18.5, previous abdominal surgery, increased Wexner Constipation Score, and lesser endoscopist experience were associated with prolonged CIT., Conclusions: BMI, previous abdominal surgery, severity of constipation, and the experience of endoscopist may affect CIT. Considering these factors during daily planning in the endoscopy unit can lead to more efficient facility utilization., (© 2024. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.)
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- 2024
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77. The Anti-proliferative Effect of a Novel Glutaminase Inhibitor IN-3 on Prostate Cancer Cells.
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Demir U and Celik AB
- Abstract
Objective: This study aimed to evaluate anti-cancer potential of a novel glutaminase (GLS) inhibitor IN-3 in prostate cancer cells., Methods: The cell viability upon IN-3 treatment was examined using crystal violet staining and IC
50 values were calculated for cancer cell lines PC-3 and LNCaP and normal fibroblasts CCD1072sk. The expression levels of GLS isoforms were determined by real-time polymerase chain reaction after IN-3 treatment. The metastatic prostate cancer dataset was downloaded from C-Bioportal and the expressions of GLS isoforms were analyzed., Results: The IC50 values of IN-3 for LNCaP, PC-3 and CCD1072sk were 2.13, 6.14 and 15.39 μM respectively. The dose dependent effect of IN-3 was evident even in low concentration with 1 μM in LNCaP and 2 μM in PC-3 and these anti-proliferative effects of IN-3 were highly significant with p-values lower than 0.0001. The treatment of PC-3 cells with 10 μM IN-3 elevated the expression of kidney type GLS isoform of GLS1 but not GLS2. Comparison of metastatic and localized prostate cancer tissues showed that GLS1 was highly expressed not only in primary but also in metastatic prostate cancer tissues. GLS1 expression was significantly higher than GLS2 expression with p-values lower than 0.001., Conclusions: The GLS inhibitor IN-3 may be a potent anti-cancer agent in prostate cancer by demonstrating its differential effect between cancer and normal cells. Further studies are warranted to elucidate its drug potential in prostate cancer., Competing Interests: Conflict of Interest: The authors have no conflict of interest to declare., (Copyright© 2024 The Author. Published by Galenos Publishing House on behalf of Istanbul Medeniyet University Faculty of Medicine.)- Published
- 2024
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78. Evaluation of Antral Biopsies Obtained in Endoscopically Normal Esophagogastroduodenoscopy: A Retrospective Cohort Study.
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Dinçer B, Ömeroğlu S, Güven O, Yanar C, Demir U, and Akgün İE
- Subjects
- Adult, Aged, Female, Humans, Male, Middle Aged, Young Adult, Biopsy methods, Metaplasia pathology, Pyloric Antrum pathology, Pyloric Antrum microbiology, Retrospective Studies, Endoscopy, Digestive System methods, Gastritis pathology, Gastritis microbiology, Gastritis diagnosis, Helicobacter Infections pathology, Helicobacter Infections diagnosis, Helicobacter pylori isolation & purification
- Abstract
Background: The requirement for routine biopsy sampling in esophagogastroduodenoscopy (EGD) with normal endoscopic findings is a subject of debate. In this study, patients who had normal endoscopic findings in EGD and underwent biopsy sampling were retrospectively analyzed., Methods: This single-center retrospective cohort study included 671 patients who underwent EGD between 2021 and 2023 in the Sisli Hamidiye Etfal Training and Research Hospital Surgical Endoscopy Unit. All patients had normal endoscopic findings and a sampling biopsy was performed on all patients included. Patients were evaluated based on demographic and clinicopathologic findings. This study was registered to ClinicalTrials.gov (NCT06269380)., Results: Two hundred sixty patients (38.7%) have abnormal histopathologic findings. Helicobacter pylori positivity was detected in 200 (29.8%) patients. Intestinal metaplasia (IM) was present in 80 of 260 patients (30.8%). The frequency of IM was higher in older age groups and cases with mild gastritis ( P <0.001). The frequency and severity of gastritis were associated with increased H. pylori positivity and density ( P <0.001)., Conclusions: The biopsy sampling may contribute to the diagnosis and treatment process in cases where normal endoscopic findings are observed during EGD., Competing Interests: The authors declare no conflicts of interest., (Copyright © 2024 Wolters Kluwer Health, Inc. All rights reserved.)
- Published
- 2024
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79. Examination of bone fractures in women exposed to domestic violence (Tokat-Turkey).
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Demir U, Etli Y, and Asirdizer M
- Subjects
- Humans, Female, Retrospective Studies, Adult, Middle Aged, Turkey epidemiology, Age Distribution, Young Adult, Intimate Partner Violence statistics & numerical data, Adolescent, Aged, Fractures, Bone epidemiology, Domestic Violence statistics & numerical data
- Abstract
Background: Fractures are an important symptom of physical violence that will negatively affect the woman's quality of life in the coming years. However, there is limited information in the literature about fractures in women exposed to domestic violence (DV). The aim of this study was to compare fracture development rates and age distributions in women exposed to DV and intimate partner violence (IPV), a component of DV, and women exposed to other physical violence (OV), to determine the incidence of DV cases with and without fractures, and to determine fracture locations in DV cases and to identify diagnostic lesions accompanying fractures., Methods: A retrospective review was made of patients injured as a result of IPV, other domestic violence (ODV) and OV. The data of cases with fracture were analyzed in terms of age groups of the victims and according to location and types of fractures., Results: Of the 854 female patients aged >18 years who were admitted to the hospital due to violence, 55.2% were exposed to DV. Most DV victims (87.9%) were assaulted by intimate partners. The incidence of fractures in IPV cases (7.2%), was nearly twice that of ODV and OV cases. The mean age of IPV cases with fractures (42.1 ± 12.1 years) was significantly higher than that of IPV cases without fractures (33.1 ± 11.8 years) (p < 0.05). Most IPV cases (61.8%) were aged <35 years. Most DV cases with fractures (75%) were aged <50 years. Facial/neck injuries (41.5%) and facial fractures (52.6%) were prominent in DV cases., Conclusion: The results of this study of the presence of facial fractures, especially in women aged <50 years, is an important finding that can alert doctors to potential cases of domestic violence., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier Ltd and Faculty of Forensic and Legal Medicine. All rights reserved.)
- Published
- 2024
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80. Effects of glutamine and omega-3 fatty acids on intestinal neomucosa formation on colon serosa in rats.
- Author
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Köstek M, Demir U, Uçak R, Avci BY, Ünal A, Gülçiçek OB, Çalişkan O, Çitgez B, Serin E, Yetkin SG, Mihmanli M, and Uludağ M
- Subjects
- Animals, Male, Rats, Short Bowel Syndrome drug therapy, Serous Membrane drug effects, Intestinal Mucosa drug effects, Intestinal Mucosa metabolism, Glutamine pharmacology, Fatty Acids, Omega-3 pharmacology, Rats, Sprague-Dawley, Colon drug effects
- Abstract
Background/aim: Intestinal neomucosa formation is a technique defined for the treatment of short bowel syndrome. This study evaluates the effect of glutamine and omega-3 fatty acids on the growth of intestinal neomucosa on the colonic serosal surface has been evaluated., Materials and Methods: Thirty-two adult male Sprague-Dawley rats were randomly divided into 4 groups: sham, control, glutamine, and omega-3. Laparotomy was performed on all groups. For rats other than the sham group, a 1-cm full-thickness incision was made 4 cm proximal to the ileocecal valve, and colonic serosal surface was sutured as a serosal patch over these openings. By using the oral gavage technique, the glutamine group was ingested with 200 mg/kg/day of glutamine, and the omega-3 group was ingested with 100 mg/kg/day of omega-3 fatty acids. At the end of 14 days, the rats were euthanized, blood specimens were collected, and intestinal segments, including serosal patches, were excised., Results: Transforming growth factor-beta was significantly lower in the glutamine group compared to the control group. Similarly, fibroblast growth factor-2 was significantly lower in the glutamine group compared to the sham group. Intestinal neomucosa formation was observed in 100% of rats in the glutamine group. In the control and omega-3 groups, intestinal neomucosa formation was observed in 57.1% and 60% of rats, respectively. The inflammatory response, granulation tissue formation, and fibroblastic activity were more severe in the rats of the glutamine and omega-3 groups., Conclusion: The intestinal neomucosa formation is an experimental technique, and both glutamine and omega-3 fatty acids have the potential to positively affect inflammatory response, granulation tissue formation, and fibroblastic activity. Specifically, glutamine has a favorable effect on intestinal neomucosa formation., (© TÜBİTAK.)
- Published
- 2024
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81. Domain Generalization with Correlated Style Uncertainty.
- Author
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Zhang Z, Wang B, Jha D, Demir U, and Bagci U
- Abstract
Domain generalization (DG) approaches intend to extract domain invariant features that can lead to a more robust deep learning model. In this regard, style augmentation is a strong DG method taking advantage of instance-specific feature statistics containing informative style characteristics to synthetic novel domains. While it is one of the state-of-the-art methods, prior works on style augmentation have either disregarded the interdependence amongst distinct feature channels or have solely constrained style augmentation to linear interpolation. To address these research gaps, in this work, we introduce a novel augmentation approach, named Correlated Style Uncertainty (CSU), surpassing the limitations of linear interpolation in style statistic space and simultaneously preserving vital correlation information. Our method's efficacy is established through extensive experimentation on diverse cross-domain computer vision and medical imaging classification tasks: PACS, Office-Home, and Camelyon17 datasets, and the Duke-Market1501 instance retrieval task. The results showcase a remarkable improvement margin over existing state-of-the-art techniques. The source code is available https://github.com/freshman97/CSU.
- Published
- 2024
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82. Radiomics Boosts Deep Learning Model for IPMN Classification.
- Author
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Yao L, Zhang Z, Demir U, Keles E, Vendrami C, Agarunov E, Bolan C, Schoots I, Bruno M, Keswani R, Miller F, Gonda T, Yazici C, Tirkes T, Wallace M, Spampinato C, and Bagci U
- Abstract
Intraductal Papillary Mucinous Neoplasm (IPMN) cysts are pre-malignant pancreas lesions, and they can progress into pancreatic cancer. Therefore, detecting and stratifying their risk level is of ultimate importance for effective treatment planning and disease control. However, this is a highly challenging task because of the diverse and irregular shape, texture, and size of the IPMN cysts as well as the pancreas. In this study, we propose a novel computer-aided diagnosis pipeline for IPMN risk classification from multi-contrast MRI scans. Our proposed analysis framework includes an efficient volumetric self-adapting segmentation strategy for pancreas delineation, followed by a newly designed deep learning-based classification scheme with a radiomics-based predictive approach. We test our proposed decision-fusion model in multi-center data sets of 246 multi-contrast MRI scans and obtain superior performance to the state of the art (SOTA) in this field. Our ablation studies demonstrate the significance of both radiomics and deep learning modules for achieving the new SOTA performance compared to international guidelines and published studies (81.9% vs 61.3% in accuracy). Our findings have important implications for clinical decision-making. In a series of rigorous experiments on multi-center data sets (246 MRI scans from five centers), we achieved unprecedented performance (81.9% accuracy). The code is available upon publication.
- Published
- 2023
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83. Three candidate anticancer drugs were repositioned by integrative analysis of the transcriptomes of species with different regenerative abilities after injury.
- Author
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Kubat Oktem E, Demir U, Yazar M, and Arga KY
- Subjects
- Male, Animals, Mice, Rats, Molecular Docking Simulation, Zebrafish, Transcriptome, Antineoplastic Agents pharmacology
- Abstract
Regeneration is a homeostatic process that involves the restoration of cells and body parts. Most of the molecular mechanisms and signalling pathways involved in wound healing, such as proliferation, have also been associated with cancer cell growth, suggesting that cancer is an over/unhealed wound. In this study, we examined differentially expressed genes in spinal cord samples from regenerative organisms (axolotl and zebrafish) and nonregenerative organisms (mouse and rat) compared to intact control spinal cord samples using publicly available transcriptomics data and bioinformatics analyses. Based on these gene signatures, we investigated 3 small compounds, namely cucurbitacin I, BMS-754807, and PHA-793887 as potential candidates for the treatment of cancer. The predicted target genes of the repositioned compounds were mainly enriched with the greatest number of genes in cancer pathways. The molecular docking results on the binding affinity between the repositioned compounds and their target genes are also reported. The repositioned 3 small compounds showed anticancer effect both in 2D and 3D cell cultures using the prostate cancer cell line as a model. We propose cucurbitacin I, BMS-754807, and PHA-793887 as potential anticancer drug candidates. Future studies on the mechanisms associated with the revealed gene signatures and anticancer effects of these three small compunds would allow scientists to develop therapeutic approaches to combat cancer. This research contributes to the evaluation of mechanisms and gene signatures that either limit or cause cancer, and to the development of new cancer therapies by establishing a link between regeneration and carcinogenesis., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 Elsevier Ltd. All rights reserved.)
- Published
- 2023
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84. Positive lymph node ratio as a prognostic factor for gastric cancer patients: Is it going to supersede positive lymph node number in guidelines?
- Author
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Çapkinoğlu E, Tufan AE, Ömeroğlu S, Tanal M, Güven O, and Demir U
- Subjects
- Humans, Male, Female, Prognosis, Retrospective Studies, Neoplasm Staging, Lymph Node Ratio, Lymph Node Excision, Lymph Nodes surgery, Lymph Nodes pathology, Gastrectomy, Stomach Neoplasms pathology
- Abstract
Gastric malignancies constitute the sixth most common cancer with regards to incidence and have the fifth most mortality rates. Extended lymph-node dissection is the surgical modality of choice while treating advanced stage gastric cancer. It is yet a topic of debate, whether or not the amount of positive lymph nodes after a pathological examination following the surgical intervention is of prognostic value. In this study, it is aimed to evaluate the prognostic significance of positive lymph nodes following the surgery. A total of 193 patients who underwent curative gastrectomy between January 2011 and December 2015 have been considered for a retrospective data collection. The cases with R1-R2 resections, palliative or emergent surgeries are excluded. Metastatic to total number of lymph nodes, corresponded a ratio which was analyzed in this survey and practiced as a predictive parameter of disease outcome. This survey includes 138 male (71.5%) and 55 female (28.5%) patients treated between 2011 and 2015 in our clinic. The survey follow-up duration of the cases range between 0, 2, and 72 months, corresponding an average of 23.24 ± 16.99 months. We calculated cutoff value of 0.09 with, sensitivity is 76.32% for positive to total number of lymph nodes ratio, whereas specivity applies for 64.10%, positive predictive value for 58% and negative predictive value for 80.6%. Positive lymph node ratio has a prognostic value in terms of predicting the prognosis of the patients with gastric adenocarcinoma following a curative gastrectomy. This might in long term contribute to the prognostic analysis of patients if integrated in the current staging system., Competing Interests: The authors have no funding and conflicts of interest to disclose., (Copyright © 2023 the Author(s). Published by Wolters Kluwer Health, Inc.)
- Published
- 2023
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85. [An Unusual Complication in 3 Cases: Renal��Subcapsular Hematoma Following Percutaneous Angioplasty].
- Author
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Cing Z M, G Zelbey T, Demir UU, Mutlu L, and K L Kesmez ZR
- Subjects
- Humans, Angioplasty adverse effects, Hematoma diagnostic imaging, Hematoma etiology, Hematoma therapy, Renal Artery Obstruction diagnostic imaging, Renal Artery Obstruction etiology, Renal Artery Obstruction surgery, Hypertension complications
- Abstract
Renal artery stenosis is the leading cause of secondary hypertension. Percutaneous treatment options are safe and e���ective but can, in rare cases, entail possible complications such as renal subcapsular hematoma. Awareness of such complications will enable better management. Although post-intervention subcapsular hematomas are believed to occur secondary to wire perforation, in this report, we present 3 cases demonstrating reperfusion injury ���ndings rather than wire perforation.
- Published
- 2023
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86. Does prolonged prone position affect intracranial pressure? prospective observational study employing Optic nerve sheath diameter measurements.
- Author
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Demir U, Taşkın Ö, Yılmaz A, Soylu VG, and Doğanay Z
- Subjects
- Humans, Optic Nerve diagnostic imaging, Prospective Studies, Ultrasonography, Intracranial Hypertension diagnosis, Intracranial Hypertension etiology, Intracranial Pressure physiology, Prone Position, Respiratory Distress Syndrome diagnostic imaging, Respiratory Distress Syndrome therapy, Respiratory Distress Syndrome complications
- Abstract
Background: Our aim in this observational prospective study is to determine whether the prone position has an effect on intracranial pressure, by performing ultrasound-guided ONSD (Optic Nerve Sheath Diameter) measurements in patients with acute respiratory distress syndrome (ARDS) ventilated in the prone position., Methods: Patients hospitalized in the intensive care unit with a diagnosis of ARDS who were placed in the prone position for 24 h during their treatment were included in the study. Standardized sedation and neuromuscular blockade were applied to all patients in the prone position. Mechanical ventilation settings were standardized. Demographic data and patients' pCO
2 , pO2 , PaO2 /FiO2 , SpO2 , right and left ONSD data, and complications were recorded at certain times over 24 h., Results: The evaluation of 24-hour prone-position data of patients with ARDS showed no significant increase in ONSD. There was no significant difference in pCO2 values either. PaO2 /FiO2 and pO2 values demonstrated significant cumulative increases at all times. Post-prone SPO2 values at the 8th hour and later were significantly higher when compared to baseline (p < 0.001)., Conclusion: As a result of this study, it appears that the prone position does not increase intracranial pressure during the first 24 h and can be safely utilized, given the administration of appropriate sedation, neuromuscular blockade, and mechanical ventilation strategy. ONSD measurements may increase the safety of monitoring in patients ventilated in the prone position., (© 2023. The Author(s).)- Published
- 2023
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87. Extracorporeal Circulation and Optic Nerve Ultrasound: A Pilot Study.
- Author
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Taşkın Ö and Demir U
- Subjects
- Humans, Adolescent, Adult, Pilot Projects, Optic Nerve diagnostic imaging, Intracranial Pressure physiology, Ultrasonography methods, Extracorporeal Circulation adverse effects, Intracranial Hypertension etiology
- Abstract
Background and Objectives : Cardiopulmonary bypass (CPB) is an extracorporeal circuit that provides surgical access to an immobile and bloodless area, allowing for technical and procedural advances in cardiothoracic surgery. CBP can alter the integrity of the blood-brain barrier and cause changes in intracranial pressure (ICP) postoperatively. Optical nerve sheath diameter (ONSD) measurement is among the alternative non-invasive methods for ICP monitoring. In this study, we aimed to evaluate the optic nerve sheath diameter measurements under the guidance of ultrasonography for ICP changes during the extracorporeal circulation process. Materials and Methods : The study population included 21 patients over 18 years of age who required extracorporeal circulation. Demographic data of the patients, such as age, gender, comorbidity, American Society of Anesthesiologists (ASA) classification and reason for operation (coronary artery disease or mitral or aortic valve disease) were recorded. The ONSD was measured and evaluated before the extracorporeal circulation (first time) and at the 30th minute (second time), 60th minute (third time) and 90th minute (fourth time) of the extracorporeal circulation. Non-invasive ICP (ICP ONSD) values were calculated based on the ONSD values found. Results : The mean ONSD values measured before the extracorporeal circulation of the patients were found to be 4.13 mm (3.8-4.6) for the right eye and 4.36 mm (4.1-4.7) for the left eye. Calculated nICPONSD values of 11.0 mm Hg (1.0-21.0) for the right eye and 10.89 mm Hg (1.0-21.0) for the left eye were found. It was observed that there was a significant increase in the ONSD and nlCPONSD values recorded during the extracorporeal circulation of all patients compared to the baseline values ( p < 0.005). Conclusions : During extracorporeal circulation, ultrasound-guided ONSD measurement is an easy, inexpensive and low-complication method that can be performed at the bedside during the operation to monitor ICP changes.
- Published
- 2023
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88. Clinical significance of the largest histopathological metastatic lymph node size for postoperative course of patients undergoing surgery for gastric cancer.
- Author
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Omeroglu S, Gulmez S, Yazici P, Demir U, Guven O, Capkinoglu E, Uzun O, Senger AS, Polat E, and Duman M
- Abstract
Aim: The aim of this study was to investigate the effect of the largest metastatic lymph node (MLN) size on postoperative outcomes of patients with stage II-III gastric cancer (GC)., Methods: A total of 163 patients with stage II/III GC who underwent curative surgery were included in this single-center retrospective study. The lymph nodes were counted, each lymph node was analyzed for metastatic involvement by histopathological examination, and the diameter of the largest metastatic lymph node was recorded. The severity of postoperative complications was assessed by Clavien-Dindo classification system. Two groups of 163 patients were defined according to ROC analysis with cut-off value of histopathologically maximum MLN diameter. A comparative analysis of demographic and clinicopathological characteristics of the patients and their postoperative outcomes were performed., Results: The median hospital stay was significantly longer in patients with major complications compared to patients without major complications [18 days (IQR: 13-24) vs. 8 days (IQR: 7-11); ( p < 0.001)]. The median MLN size was significantly larger in deceased patients compared to survived [1.3 cm (IQR: 0.8-1.6) vs. 0.9 cm (IQR: 0.6-1.2), respectively; ( p < 0.001)]. The cut-off value of MLN size predicting mortality was found as 1.05 cm. MLN size ≥1.05 cm had nearly 3.5 times more negative impact on survival., Conclusions: The largest metastatic lymph node size had a significant association with survival outcomes. Particularly, MLN size over 1.05 cm was associated with worse survival outcomes. However, the largest MLN was not shown to have any effect on major complications. Further prospective and large-scale studies are required to draw more precise conclusions., Competing Interests: The reviewer EB declared a past co-authorship with the author SO to the handling editor., (© 2023 Omeroglu, Gulmez, Yazici, Demir, Guven, Capkinoglu, Uzun, Senger, Polat and Duman.)
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- 2023
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89. Ferritin / albumin ratio could be a new indicator of COVID-19 disease mortality.
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Taşkin Ö, Yilmaz A, Soylu VG, Demir U, and Çatan Inan F
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- Humans, Critical Care methods, Prognosis, Retrospective Studies, ROC Curve, Albumins, COVID-19 diagnosis, COVID-19 mortality, Ferritins
- Abstract
Introduction: Despite significant advances in the management of patients with COVID-19, there is a need for markers to guide treatment and predict disease severity. In this study, we aimed to evaluate the relationship of the ferritin/albumin (FAR) ratio with disease mortality., Methodology: Acute Physiology and Chronic Health Assessment II scores and laboratory results of patients diagnosed with severe COVID-19 pneumonia were retrospectively analyzed. The patients were divided into two groups: survivors and non-survivors. Data for ferritin, albumin, and ferritin/albumin ratio among COVID-19 patients were analyzed and compared., Results: The mean age was higher in non-survivors (p = 0.778, p < 0.001, respectively). The ferritin/albumin ratio was significantly higher in the non-survival group (p < 0.05). Taking the cut-off value of the ferritin/albumin ratio of 128.71 in the ROC analysis, it predicted the critical clinical status of COVID-19 with 88.4% sensitivity and 88.4% specificity., Conclusions: ferritin/albumin ratio is a practical, inexpensive, and easily accessible test that can be used routinely. In our study, the ferritin/albumin ratio has been identified as a potential parameter in determining the mortality of critically ill COVID-19 patients treated in intensive care., Competing Interests: No Conflict of Interest is declared, (Copyright (c) 2023 Ozturk Taskin, Ayse Yilmaz, Veysel Garani Soylu, Ufuk Demir, Funda Catan Inan.)
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- 2023
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90. Retrospective Comparison of Anesthetic Methods for Percutaneous Balloon Kyphoplasty Surgery: General Anesthesia and Erector Spinae Plane Block.
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Demir U and Taşkın Ö
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- Humans, Anesthetics, Local, Retrospective Studies, Pain, Postoperative etiology, Postoperative Complications, Anesthesia, General adverse effects, Analgesics, Opioid, Nerve Block methods, Kyphoplasty adverse effects
- Abstract
Background and Objectives : This study aims to investigate whether erector spinae plane (ESP) block can be an alternative to general anesthesia as a primary anesthesia method in percutaneous balloon kyphoplasty surgery. In addition, postoperative intensive care needs were compared in terms of length of intensive care unit stay and length of hospital stay. Materials and Methods : Medical records of patients who underwent percutaneous balloon kyphoplasty operation at Kastamonu Training and Research Hospital between January 2020 and November 2022 were reviewed retrospectively. Among 70 patients who underwent percutaneous balloon kyphoplasty, 58 patients with ASA (American Association of Anesthesiologists) classification III or IV, who underwent general anesthesia as the anesthesia method or ESP block, were included in the study. The patients were divided into two groups according to the anesthesia method applied. Group GA: general anesthesia group ( n = 19) and Group ESP: ESP block group ( n = 39). Group data for age, gender, ASA classification, number of surgical levels, surgical urgency, duration of surgery, postoperative complications, need for intensive care, length of stay in the intensive care unit, and hospital stay were compared. Results : There was no statistically significant difference between Group GA and Group ESP in terms of age, gender, ASA classification, surgical urgency, number of surgical levels, duration of surgery, and postoperative complication data of the patients included in the study. Seven (36.6%) patients in Group GA and six (15.4%) patients in Group ESP needed intensive care, and there was no statistically significant difference between the groups ( p = 0.06). However, the need for intensive care was higher in Group GA. A statistically significant difference was found in Group GA and Group ESP, which was higher in Group GA for the length of stay in the intensive care unit ( p = 0.02) and length of hospitalization ( p = 0.04). Conclusions : ESP block may be an alternative method to general anesthesia as the primary anesthetic option for single or multilevel percutaneous balloon kyphoplasty surgery. With the ESP block, the length of stay in the intensive care unit and the length of stay in the hospital can be reduced, especially in high-risk patients.
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- 2023
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91. Predictive Role of Biomarkers in COVID-19 Mortality.
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Yılmaz A, Taşkın Ö, Demir U, and Soylu VG
- Abstract
Background The coronavirus disease 2019 (COVID-19) pandemic has resulted in high mortality among patients in critical intensive care units. Hence, identifying mortality markers in the follow-up and treatment of these patients is essential. This study aimed to evaluate the relationships between mortality rates in patients with COVID-19 and the neutrophil/lymphocyte ratio (NLR), derived NLR (dNLR), platelet/lymphocyte ratio (PLR), monocyte/lymphocyte ratio (MLR), systemic inflammation response index (SII), and systemic inflammatory response index (SIRI). Methodology In this study, we assessed 466 critically ill patients diagnosed with COVID-19 in the adult intensive care unit of Kastamonu Training and Research Hospital. Age, gender, and comorbidities were recorded at the time of admission along with NLR, dNLR, MLR, PLR, SII, and SIRI values from hemogram data. Acute Physiology and Chronic Health Evaluation II (APACHE II) scores and mortality rates over 28 days were recorded. Patients were divided into survival (n = 128) and non-survival (n = 338) groups according to 28-day mortality. Results A statistically significant difference was found between leukocyte, neutrophil, dNLR, APACHE II, and SIRI parameters between the surviving and non-surviving groups. A logistic regression analysis of independent variables of 28-day mortality identified significant associations between dNLR (p = 0.002) and APACHE II score (p < 0.001) and 28-day mortality. Conclusions Inflammatory biomarkers and APACHE II score appear to be good predictive values for mortality in COVID-19 infection. The dNLR value was more effective than other biomarkers in estimating mortality due to COVID-19. In our study, the cut-off value for dNLR was 3.64., Competing Interests: The authors have declared that no competing interests exist., (Copyright © 2023, Yılmaz et al.)
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- 2023
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92. An investigation of the effect of the COVID-19 (SARS-CoV-2) pandemic on occupational accidents (Tokat-Turkey).
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Demir U, Asirdizer M, Kartal E, Etli Y, and Hekimoglu Y
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- Humans, Pandemics, SARS-CoV-2, Turkey epidemiology, Accidents, Occupational, COVID-19 epidemiology
- Abstract
The aims of this study were to compare the incidence of occupational accidents during one-year periods of the COVID-19 Pandemic and before the COVID-19 Pandemic, and to determine in which sectors occupational accidents occurred and what types of injuries were sustained in the population of Tokat, Turkey. A retrospective review was made of the records of Tokat State Hospital of patients injured in occupational accidents between 12.03.2019 and 11.03.2021. The patients injured in occupational accidents were classified according to age, gender, sector, accident type, trauma localization and type, time of the accident, and outcome of the injuries. Of 608 patients injured in occupational accidents, 384 (63.2%) were injured in the period before the pandemic and 224 (36.8%) were injured in the period during the pandemic ( p < 0.001). Most work-related injuries occurred in the industry sector (n = 287; 47.2%; p < 0.001). Occupational accidents increased in the service sector ( p < 0.001), but decreased in other sectors. The increase in occupational accidents in the health sector ( p < 0.001) and transportation sector ( p < 0.05) within the service sector caused a general increase despite the decrease in other service sectors ( p > 0.05). In current study, the increase in the number of injuries in the transportation sector due to the increase of motor courier accidents, in health sector, and in pandemic quarantines were remarkable. It was evaluated that this narrow-scoped study pioneered comprehensive studies on the measures that can be taken to prevent occupational accidents in such pandemics in the future.
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- 2023
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93. Can Ultrasound-Guided Femoral Vein Measurements Predict Spinal Anesthesia-Induced Hypotension in Non-Obstetric Surgery? A Prospective Observational Study.
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Yılmaz A, Demir U, Taşkın Ö, Soylu VG, and Doğanay Z
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- Male, Humans, Adult, Middle Aged, Female, Femoral Vein diagnostic imaging, Ultrasonography, Ultrasonography, Interventional, Anesthesia, Spinal adverse effects, Hypotension, Controlled
- Abstract
Background and objectives : To investigate whether ultrasound (US)-guided femoral vein (FV) and inferior vena cava (IVC) measurements obtained before spinal anesthesia (SA) can be utilized to predict SA-induced hypotension (SAIH) and to identify risk factors associated with SAIH in patients undergoing non-obstetric surgery under SA. Methods : This was a prospective observational study conducted between November 2021 and April 2022. The study included 95 patients over the age of 18 with an American Society of Anesthesiologists (ASA) physical status score of 1 or 2. The maximum and minimum diameters of FV and IVC were measured under US guidance before SA initiation, and the collapsibility index values of FV and IVC were calculated. Patients with and without SAIH were compared. Results : SAIH was observed in 12 patients (12.6%). Patients with and without SAIH were similar in terms of age [58 (IQR: 19-70) vs. 48 (IQR: 21-71; p = 0.081) and sex (males comprised 63.9% of the SAIH and 75.0% of the non-SAIH groups) ( p = 0.533). According to univariate analysis, no significant relationship was found between SAIH and any of the FV or IVC measurements. Multiple logistic regression analysis revealed that having an ASA class of 2 was the only independent risk factor for SAIH development ( p = 0.014), after adjusting for age, sex, and all other relevant parameters. Conclusions : There is not enough evidence to accept the feasibility of utilizing US-guided FV or IVC measurements to screen for SAIH development in patients undergoing non-obstetric surgery under SA. For this, multicenter studies with more participants are needed.
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- 2022
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94. Sex estimation using foramen magnum measurements, discriminant analyses and artificial neural networks on an eastern Turkish population sample.
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Kartal E, Etli Y, Asirdizer M, Hekimoglu Y, Keskin S, Demir U, Yavuz A, and Celbis O
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- Male, Female, Humans, Discriminant Analysis, Neural Networks, Computer, Image Processing, Computer-Assisted, Forensic Anthropology methods, Foramen Magnum diagnostic imaging, Foramen Magnum anatomy & histology, Sex Determination by Skeleton methods
- Abstract
Background: Although many studies have been conducted using the foramen magnum for sex estimation, recent findings have indicated that the discriminant and regression models obtained from the foramen magnum may not be reliable. Artificial Neural Networks, was used as a classification technique in sex estimation studies on some other bones, did not used in sex estimation studies on the foramen magnum until now. The aim of this study was sex estimation on an Eastern Turkish population sample using foramen magnum measurements, discriminant analyses and Artificial Neural Networks., Methodology: The study was performed on the CT images of a total of 720 cases, comprising 360 males and 360 females. For sex estimation, discriminant analysis and Artificial Neural Networks were used., Results: The accuracy rate was 86.7% with discriminant analysis and when sex estimation accuracy was determined according to cases with posterior probabilities above 95%, the accuracy ranged from 0% to 33.3%. With the use of the discriminant formulas of 2 other studies, obtained from different Turkish samples, sex could be determined at a rate of 84.6%. Some formulas were found to be unsuccessful in sex estimation. Sex estimation accuracy of 88.2% was achieved with Artificial Neural Networks., Conclusion: In this study, it was found that sex could be determined to some extent with discriminant formulas from other samples from the same population, although some formulas were unsuccessful. With the use of image processing techniques and machine learning algorithms, better results can be obtained in sex estimation., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022 Elsevier B.V. All rights reserved.)
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- 2022
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95. Factors Influencing the Success of Atropine Penalization Treatment in Amblyopia Patients Non-Responsive to Occlusion Treatment.
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Sultan P, Demir U, Sonmezay SE, and Gungel H
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- Child, Humans, Adolescent, Atropine therapeutic use, Retrospective Studies, Visual Acuity, Ophthalmic Solutions therapeutic use, Amblyopia drug therapy
- Abstract
Purpose: To evaluate the efficacy of atropine penalization after non-response to patch therapy in amblyopic children and investigate the factors associated with treatment success., Patients and Methods: In this retrospective study, 26 children with amblyopia who were non-responders to patch therapy who were then switched to 1% atropine eye drops in the sound eye for a minimum follow-up of one year were included. All patients underwent detailed eye examinations, including optical coherence tomography and fundus autofluorescence (FAF) imaging. Response to treatment was defined as a two-line improvement in best-corrected visual acuity (BCVA) in the amblyopic eye, and patients were divided into two groups: the responder group and the non-responder group. Demographic and clinical parameters were compared between the two groups. The average central macular thickness and FAF were analyzed., Results: Sixteen of 26 patients (61.5%) showed treatment response. The mean age of the patients was 10.62 ± 3.42 (5-17) years. There was no difference between the groups in age, age at start of patch therapy, sex, follow-up period, refractive errors, type of amblyopia, reason for patch therapy non-response, or mean effective patching time per day. In the responder group, the LogMAR values of pretreatment BCVA, BCVA after optical correction, and BCVA after occlusion were significantly higher, but BCVA after atropine treatment showed no difference. FAF images of all patients were normal, and the mean central macular thickness did not significantly differ between the groups., Conclusions: Atropine penalization can improve BCVA in children with amblyopia who are non-responders to patch therapy. Atropine penalization may be more successful in children with poor BCVA at the start of atropine penalization in the amblyopic eye. The results of FAF imaging and mean central macular thickness were not associated with treatment outcomes.
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- 2022
96. Management of Nonocclusive Mesenteric Ischemia in Patients with Cardiac Failure.
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Ömeroğlu S, Tanal M, Beyaz MO, Güven O, Demir I, Kabul Gürbulak E, and Demir U
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- Humans, Prognosis, Mesenteric Ischemia diagnosis, Mesenteric Ischemia surgery, Cardiac Surgical Procedures, Heart Failure
- Abstract
Aim: This study aimed to evaluate the surgical procedures, outcomes, and prognostic factors in patients with ischemic heart disease who were operated on due to nonocclusive mesenteric ischemia (NOMI)., Material and Methods: This research contains all patients diagnosed with congestive heart failure and NOMI between January 2011 to January 2020. The patients who had angiography or CT that showed occlusion of more than 50% in any of the main branches of the mesenteric artery or patients who presented with symptoms in correlation with a total occlusion were excluded from the study. Patients who underwent coronary heart surgery but were not diagnosed with congestive heart failure and those with atrial fibrillation also were excluded from the study. Patients divided into two groups, according to a medical database., Results: A significant difference was found between the surviving and non-survivor groups in minutes, in terms of median time to segmenter intestinal resection (P = 0.042)., Conclusion: An early diagnosis and surgical segmental intestinal resection before peritonitis worsens can be the key to better prognosis for NOMI patients.
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- 2022
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97. Airflow patterns in the trachebronchial tree of a patient with an accessory cardiac bronchus: A rare congenital anomaly.
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Köybaşı G, Satıcı C, Demir U, Atasever F, Özdemir C, and Koşar F
- Subjects
- Humans, Lung diagnostic imaging, Bronchi diagnostic imaging, Trachea diagnostic imaging
- Abstract
Accessory cardiac bronchus (ACB) is a rare congenital anomaly mainly located in the medial wall of the intermediate bronchus. This anomaly can present with dyspnea, recurrent infections, and hemoptysis. It usually has a blind ending, which may have an impact on airflow patterns and lobar distribution regardless of its diameter and depth. There have been very few cases with ACB. However, the airflow pattern and lobar distribution have not been well studied. In our case with ACB, the proportion of airflow in the right lung was higher than in the model without ACB, while mean airflow velocities were similar in both models. In this regard, quantitative lung ventilation scintigraphy could be better than the anatomical formula in predicting postoperative forced expiratory volume 1 in patients with accessory cardiac bronchus who will undergo lung resection.
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- 2022
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98. Suicides in Turkey: 25-year trend (1995-2019).
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Kartal E, Demir U, Hekimoglu Y, Keskin S, and Asirdizer M
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- Adolescent, Female, Humans, Male, Retrospective Studies, Sex Distribution, Turkey epidemiology, Violence, Young Adult, Suicide
- Abstract
The assessment of national suicide risks is considered critical in many countries for the establishment of suicide prevention initiatives aimed at considerably lowering suicide rates. The aim of this study is to identify at-risk suicide populations by reviewing the suicides in Turkey over a 25-year period. The Turkish Statistical Institute's suicide statistics for 1995-2019 in Turkey was retrospectively reviewed in current article. The data collected in the study was statistically analyzed using the MINITAB vn 14 software. Between 1995 and 2019, the total number of suicides in Turkey was 66,819, and suicide rates, especially in males, showed an increasing trend in this period. Males comprised 68.3% of the total cases, and most (27.2%) were aged 15-24 years. Suicides mostly occurred between May and July (27.7%), of individuals with a primary school level of education (51.7%) and who were married (6.0 per 100,000). Illness was most important risk factor for suicide (36.8%) and hanging (47.5%) was the leading suicide method in all age groups and in both genders. Despite the fact that Turkey's suicide rate is lower than many other countries, the growth in male suicide rates is concerning. Suicides are likely to become a severe problem in Turkey in the near future unless measures like education, psychiatric evaluations, the reactivation of psychological counseling service phone lines, and the establishment of youth counseling centers, as described in this paper, are taken., (© 2022 American Academy of Forensic Sciences.)
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- 2022
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99. Investigation of the cytotoxic, anti-proliferative and anti-angiogenic effects of Toluhydroquinone on Caco-2 cell line.
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Kucak M, Demir U, and Muslumanoglu MH
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- Humans, Caco-2 Cells, Angiogenesis Inhibitors pharmacology, Angiogenesis Inhibitors therapeutic use, Anti-Inflammatory Agents, Antineoplastic Agents pharmacology, Colorectal Neoplasms drug therapy
- Abstract
Colorectal cancer is one of the most common types of cancer in the world. The treatment options for colorectal carcinoma generally consist of surgery, radiotherapy and chemotherapy. The drug resistance to chemotherapy agents used in the current cancer treatment has brought about the finding of new drug molecules from some plant and aquatic species in the treatment approaches. Some species of aquatic biota create novel biomolecules as potential drugs for cancer and other diseases. Toluhydroquinone belongs to these groups of biomolecules and it shows anti-oxidative, anti-inflammatory and anti-angiogenic properties. In this study, we tested the cytotoxic and anti-angiogenic effects of Toluhydroquinone on Caco-2(Human colorectal carcinoma cell line) cells. It was observed that the amount of closure of the wound space, colony forming ability (in vitro cell survivability) and formation of tubule-like structures in matrigel decreased in comparison to the control group. As a result of this study, Toluhydroquinone has cytotoxic, anti-proliferative and anti-angiogenic properties on the Caco-2 cell line.
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- 2022
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100. Sex estimation from the clavicle using 3D reconstruction, discriminant analyses, and neural networks in an Eastern Turkish population.
- Author
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Demir U, Etli Y, Hekimoglu Y, Kartal E, Keskin S, Yavuz A, and Asirdizer M
- Subjects
- Discriminant Analysis, Female, Forensic Anthropology, Humans, Imaging, Three-Dimensional, Male, Neural Networks, Computer, Clavicle anatomy & histology, Clavicle diagnostic imaging, Sex Determination by Skeleton methods
- Abstract
Sex estimation of skeletal remains is an important aspect of forensic anthropology. The clavicle is a bone with relatively high accuracy in sex determination. In this study, 7 clavicular parameters were obtained using the CT images and 3D reconstruction of 360 cases equally distributed as 180 males and 180 females. Sex determination was made using univariate, linear, and stepwise discriminant analyses, and multilayer perceptron neural networks. Maximum sex determination accuracy of 85.3% was achieved with univariate analysis, 89.4% with linear discriminant analysis, 90.0% with stepwise discriminant analysis, and 91.4% with multilayer perceptron neural networks. Significant changes were observed in the MLC, APMD-R and CDC parameters according to age, and these were determined to affect the accuracy of sex determination in different age groups. In forensic anthropological studies, more reliable results can be obtained by considering the confounding factors during sampling. Although high accuracy rates can be achieved with neural networks, the results should be approached with caution., (Copyright © 2022 Elsevier B.V. All rights reserved.)
- Published
- 2022
- Full Text
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